Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmA gene

Properties
Regulator type: RNA regulatory element
Name: L21_leader
RFAM: RF00559
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Staphylococcus capitis SK14
Position: -138
Score: 31.93
Sequence: CATACAACCGCTCAA...
Locus tag: STACA0001_2373
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: STACA0001_2374
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: STACA0001_2375
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -138 31.9 CATACAACCGCTCAA... STACA0001_2373
Staphylococcus carnosus subsp. carnosus TM300
Position: -92
Score: 53.85
Sequence: TAGCTACATACAACC...
Locus tag: Sca_1258a
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: Sca_1257
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: Sca_1256
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -92 53.8 TAGCTACATACAACC... Sca_1258a
Staphylococcus epidermidis ATCC 12228
Position: -90
Score: 56.36
Sequence: AAGCTACATACAACC...
Locus tag: SE1330
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SE1329
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SE1328
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -90 56.4 AAGCTACATACAACC... SE1330
Staphylococcus haemolyticus JCSC1435
Position: -90
Score: 55.18
Sequence: GCTACATACAACCGC...
Locus tag: SH1273
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SH1274
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SH1275
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -90 55.2 GCTACATACAACCGC... SH1273
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -86
Score: 52.6
Sequence: GCTACATACAACCGC...
Locus tag: SSP1112
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SSP1113
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SSP1114
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -86 52.6 GCTACATACAACCGC... SSP1112