Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmI gene

Properties
Regulator type: RNA regulatory element
Name: L20_leader
RFAM: RF00558
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anoxybacillus flavithermus WK1
Position: -148
Score: 72.9
Sequence: GAAACAAGCAGAAGC...
Locus tag: Aflv_0522
Name: infC
Funciton: Translation initiation factor 3
Locus tag: Aflv_0523
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: Aflv_0524
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -148 72.9 GAAACAAGCAGAAGC... Aflv_0522
Bacillus amyloliquefaciens FZB42
Position: -208
Score: 80.98
Sequence: AAATCACAAGCAGAG...
Locus tag: RBAM_025930
Name: infC
Funciton: Translation initiation factor 3
Locus tag: RBAM_025920
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: RBAM_025910
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -208 81 AAATCACAAGCAGAG... RBAM_025930
Bacillus cereus ATCC 14579
Position: -185
Score: 88.76
Sequence: GTGGAACAAGTAGAA...
Locus tag: BC4575
Name: infC
Funciton: Translation initiation factor 3
Locus tag: BC4574
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: BC4573
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -185 88.8 GTGGAACAAGTAGAA... BC4575
Bacillus clausii KSM-K16
Position: -187
Score: 80.71
Sequence: ATAGAGCAAGAAGAA...
Locus tag: ABC2689
Name: infC
Funciton: Translation initiation factor 3
Locus tag: ABC2688
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: ABC2687
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -187 80.7 ATAGAGCAAGAAGAA... ABC2689
Bacillus halodurans C-125
Position: -156
Score: 74.53
Sequence: TCAAAGCAAGAAGGA...
Locus tag: BH3140
Name: infC
Funciton: Translation initiation factor 3
Locus tag: BH3139
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: BH3138
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -156 74.5 TCAAAGCAAGAAGGA... BH3140
Bacillus licheniformis DSM 13
Position: -84
Score: 79.87
Sequence: TATCAACAAGCAGAA...
Locus tag: BLi03035
Name: infC
Funciton: Translation initiation factor 3
Locus tag: BLi03034
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: BLi03033
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -84 79.9 TATCAACAAGCAGAA... BLi03035
Bacillus subtilis subsp. subtilis str. 168
Position: -190
Score: 85.74
Sequence: AAATCACAAGCAGAA...
Locus tag: BSU28870
Name: infC
Funciton: Translation initiation factor 3
Locus tag: BSU28860
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: BSU28850
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -190 85.7 AAATCACAAGCAGAA... BSU28870
Oceanobacillus iheyensis HTE831
Position: -197
Score: 79.96
Sequence: CTAAGACAAGTAGAA...
Locus tag: OB2152
Name: infC
Funciton: Translation initiation factor 3
Locus tag: OB2151
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: OB2150
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -197 80 CTAAGACAAGTAGAA... OB2152
Paenibacillus sp. JDR-2
Position: -134
Score: 39.43
Sequence: TGCACAAGCAGAAGC...
Locus tag: Pjdr2_1288
Name: infC
Funciton: Translation initiation factor 3
Locus tag: Pjdr2_1289
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: Pjdr2_1290
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -134 39.4 TGCACAAGCAGAAGC... Pjdr2_1288