Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing chiA gene

Properties
Regulator type: RNA regulatory element
Name: GEMM_RNA_motif
RFAM: RF01051
Regulation mode:
Biological process: Second messenger response
Effector: Cyclic diguanylate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -204
Score: 76.14
Sequence: TGCGTGTAAAAGGCA...
Locus tag: Sbal_3083
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Sbal_3083 -204 76.1 TGCGTGTAAAAGGCA... Sbal_3083
Shewanella denitrificans OS217
Position: -194
Score: 61.8
Sequence: GCTGTGGAAGGCAAA...
Locus tag: Sden_2136
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Sden_2136 -194 61.8 GCTGTGGAAGGCAAA... Sden_2136
Shewanella piezotolerans WP3
Position: -222
Score: 20.14
Sequence: ATGAAATGAAAGGCA...
Locus tag: swp_0647
Name: null
Funciton: Chitinase (EC 3.2.1.14)
swp_0647 -222 20.1 ATGAAATGAAAGGCA... swp_0647
Shewanella sp ANA-3
Position: -198
Score: 78.73
Sequence: TTAGTGTAAAAGGCA...
Locus tag: Shewana3_2984
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Shewana3_2984 -198 78.7 TTAGTGTAAAAGGCA... Shewana3_2984
Shewanella sp MR-4
Position: -196
Score: 76.17
Sequence: TTATTGTGAAAGGCA...
Locus tag: Shewmr4_2805
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Shewmr4_2805 -196 76.2 TTATTGTGAAAGGCA... Shewmr4_2805
Shewanella sp MR-7
Position: -196
Score: 76.17
Sequence: TTATTGTGAAAGGCA...
Locus tag: Shewmr7_2888
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Shewmr7_2888 -196 76.2 TTATTGTGAAAGGCA... Shewmr7_2888
Shewanella woodyi ATCC 51908
Position: -270
Score: 60.79
Sequence: ATGTACAAAGGCAAA...
Locus tag: Swoo_1100
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Swoo_1100 -270 60.8 ATGTACAAAGGCAAA... Swoo_1100
© 2009-2020 RegPrecise