Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ogl gene

Properties
Regulog: KdgR - Vibrionales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Phylum: Proteobacteria/gamma
Built upon 40 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -149
Score: 5.52979
Sequence: AAATGAACCGTTGTTTCGATT
Position: -85
Score: 5.31033
Sequence: AATTAAAACGGCGTTTCGAGG
Locus tag: PBPRB1723
Name: togX1
Funciton: predicted oligogalacturonate transporter
Locus tag: PBPRB1722
Name: ogl
Funciton: Oligogalacturonate lyase (EC 4.2.2.6)
togX1-ogl -149 5.5 AAATGAACCGTTGTTTCGATT PBPRB1723
-85 5.3 AATTAAAACGGCGTTTCGAGG
Vibrio parahaemolyticus RIMD 2210633
Position: -93
Score: 5.48939
Sequence: AAATGAACCGTTGTTTTGATT
Position: -29
Score: 5.13607
Sequence: AATTAAAACAGCGTTTCGAGG
Locus tag: VPA0087
Name: togX1
Funciton: predicted oligogalacturonate transporter
Locus tag: VPA0088
Name: ogl
Funciton: Oligogalacturonate lyase (EC 4.2.2.6)
togX1-ogl -93 5.5 AAATGAACCGTTGTTTTGATT VPA0087
-29 5.1 AATTAAAACAGCGTTTCGAGG