Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrfD gene

Properties
Regulog: Fur - Vibrionales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/Gamma
Built upon 447 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -208
Score: 4.75395
Sequence: TAATGAGAATGGGTGTCAATT
Position: -191
Score: 5.09667
Sequence: AATTGCAAATGGTTTTTATTT
Locus tag: PBPRA1259
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: PBPRA1260
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: PBPRA1261
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -208 4.8 TAATGAGAATGGGTGTCAATT PBPRA1259
-191 5.1 AATTGCAAATGGTTTTTATTT
Vibrio fischeri ES114
Position: -264
Score: 5.5546
Sequence: TATTAAGAATGATTCTTATTT
Locus tag: VF_1553
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VF_1552
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VF_1551
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -264 5.6 TATTAAGAATGATTCTTATTT VF_1553
Vibrio harveyi ATCC BAA-1116
Position: -118
Score: 5.24875
Sequence: AAATAAGAATTGATGTCATTT
Position: -46
Score: 5.88896
Sequence: AATTGAGAATAGTTATCAATT
Locus tag: VIBHAR_02726
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VIBHAR_02725
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VIBHAR_02724
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VIBHAR_02723
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nfrC-nrfD -118 5.2 AAATAAGAATTGATGTCATTT VIBHAR_02726
-46 5.9 AATTGAGAATAGTTATCAATT
Vibrio parahaemolyticus RIMD 2210633
Position: -140
Score: 5.24875
Sequence: AAATAAGAATTGATGTCATTT
Position: -70
Score: 5.31152
Sequence: AGTTGAGAACAGTTATCAATT
Locus tag: VP1928
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VP1927
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VP1926
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -140 5.2 AAATAAGAATTGATGTCATTT VP1928
-70 5.3 AGTTGAGAACAGTTATCAATT
Vibrio salmonicida LFI1238
Position: -286
Score: 5.4635
Sequence: TATTAATAATGGTTCTTATTT
Position: -127
Score: 4.48097
Sequence: CAATGAGAATTGATTTCAATG
Locus tag: VSAL_I1998
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VSAL_I1999
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VSAL_I2000
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -286 5.5 TATTAATAATGGTTCTTATTT VSAL_I1998
-127 4.5 CAATGAGAATTGATTTCAATG
Vibrio shilonii AK1
Position: -274
Score: 5.71943
Sequence: TGATGATATTAATTATCATTT
Position: -125
Score: 4.88862
Sequence: AAATAAGAATTGATTACATTT
Locus tag: VSAK1_05595
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VSAK1_05590
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VSAK1_05585
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -274 5.7 TGATGATATTAATTATCATTT VSAK1_05595
-125 4.9 AAATAAGAATTGATTACATTT
Vibrio splendidus LGP32
Position: -263
Score: 5.40717
Sequence: AACTGAGAATTATTATCATAT
Position: -113
Score: 5.73282
Sequence: AAATAAGAATTGATATCATTT
Locus tag: VS_1932
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VS_1931
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VS_1930
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -263 5.4 AACTGAGAATTATTATCATAT VS_1932
-113 5.7 AAATAAGAATTGATATCATTT
Vibrio vulnificus CMCP6
Position: -144
Score: 5.24875
Sequence: AAATAAGAATTGATGTCATTT
Position: -76
Score: 5.5451
Sequence: AATTGAAAATGATTCTTAATT
Locus tag: VV1_3034
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: VV1_3033
Name: nfrC
Funciton: Putative nitrite reductase, Fe-S protein (NrfC)
Locus tag: VV1_3032
Name: nrfD
Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD -144 5.2 AAATAAGAATTGATGTCATTT VV1_3034
-76 5.5 AATTGAAAATGATTCTTAATT