Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glcF gene

Properties
Regulog: GlcC - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Glycolate utilization
Effector: Glycolate
Phylum: Proteobacteria/gamma
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -255
Score: 4.40378
Sequence: AACTGGTAGGACCATGA
Position: -157
Score: 5.31373
Sequence: AACTGGTATGACCAGCT
Locus tag: Avin_43330
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Avin_43320
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: Avin_43310
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: Avin_43300
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
Locus tag: Avin_43290
Name: glcB
Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB -255 4.4 AACTGGTAGGACCATGA Avin_43330
-157 5.3 AACTGGTATGACCAGCT
Pseudomonas aeruginosa PAO1
Position: -190
Score: 4.58113
Sequence: CGCTGGTAGGACCAGTT
Position: -103
Score: 5.18678
Sequence: TACTGGTAGGACCAGTT
Locus tag: PA5355
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: PA5354
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: PA5353
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: PA5352
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG -190 4.6 CGCTGGTAGGACCAGTT PA5355
-103 5.2 TACTGGTAGGACCAGTT
Pseudomonas fluorescens Pf-5
Position: -222
Score: 4.30229
Sequence: CACTGGTATGACCAGCC
Position: -115
Score: 4.59557
Sequence: AAGTGGTTCGACCACTG
Locus tag: PFL_2269
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: PFL_2268
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: PFL_2267
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: PFL_2266
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG -222 4.3 CACTGGTATGACCAGCC PFL_2269
-115 4.6 AAGTGGTTCGACCACTG
Pseudomonas mendocina ymp
Position: -224
Score: 6.13829
Sequence: AACTGGTCGTACCAGTT
Position: -115
Score: 6.04131
Sequence: AACTGGTCATACCAGCA
Locus tag: Pmen_0203
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Pmen_0202
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: Pmen_0201
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: Pmen_0200
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
Locus tag: Pmen_0199
Name: glcB
Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB -224 6.1 AACTGGTCGTACCAGTT Pmen_0203
-115 6 AACTGGTCATACCAGCA
Pseudomonas putida KT2440
Position: -182
Score: 4.17004
Sequence: TGCTGGTAGGACCACTT
Position: -107
Score: 5.1314
Sequence: AACTGGTAGGACCAGTC
Locus tag: PP3745
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: PP3746
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: PP3747
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: PP3748
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
glcD-glcE-glcF-glcG -182 4.2 TGCTGGTAGGACCACTT PP3745
-107 5.1 AACTGGTAGGACCAGTC
Pseudomonas stutzeri A1501
Position: -222
Score: 5.15644
Sequence: AGCTGGTAGGACCAGTT
Position: -115
Score: 5.56753
Sequence: AACTGGTAGGACCAGTT
Locus tag: PST_0431
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: PST_0432
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: PST_0433
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: PST_0434
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
Locus tag: PST_0435
Name: glcB
Funciton: Malate synthase G (EC 2.3.3.9)
glcD-glcE-glcF-glcG-glcB -222 5.2 AGCTGGTAGGACCAGTT PST_0431
-115 5.6 AACTGGTAGGACCAGTT