Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing fdx gene

Properties
Regulog: IscR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria
Built upon 15 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -65
Score: 6.10082
Sequence: ATAGTTGATCCTGTTTGTCGGGTAT
Locus tag: Avin_40410
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Avin_40400
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Avin_40390
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Avin_40380
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Avin_40370
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Avin_40360
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Avin_40350
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: Avin_40340
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -65 6.1 ATAGTTGATCCTGTTTGTCGGGTAT Avin_40410
Pseudomonas aeruginosa PAO1
Position: -71
Score: 7.11054
Sequence: ATAGTTGACCTAATTACTCGGATAA
Locus tag: PA3815
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PA3814
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PA3813
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PA3812
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PA3811
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PA3810
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PA3809
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PA3808
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -71 7.1 ATAGTTGACCTAATTACTCGGATAA PA3815
Pseudomonas entomophila L48
Position: -70
Score: 7.00091
Sequence: ATAGTTGACTTAAATGCTCGGGAAT
Locus tag: PSEEN1009
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PSEEN1010
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PSEEN1011
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PSEEN1012
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PSEEN1013
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PSEEN1014
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PSEEN1015
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PSEEN1016
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -70 7 ATAGTTGACTTAAATGCTCGGGAAT PSEEN1009
Pseudomonas fluorescens Pf-5
Position: -66
Score: 6.96814
Sequence: ATAGTTGACCTGATTACTCGGGTAT
Locus tag: PFL_4966
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PFL_4965
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PFL_4964
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PFL_4963
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PFL_4962
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PFL_4961
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PFL_4960
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PFL_4959
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -66 7 ATAGTTGACCTGATTACTCGGGTAT PFL_4966
Pseudomonas mendocina ymp
Position: -64
Score: 7.04009
Sequence: ATAGTTGACTTAAATACTCGGGAAT
Locus tag: Pmen_3512
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Pmen_3511
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Pmen_3510
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Pmen_3509
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Pmen_3508
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Pmen_3507
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Pmen_3506
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: Pmen_3505
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -64 7 ATAGTTGACTTAAATACTCGGGAAT Pmen_3512
Pseudomonas putida KT2440
Position: -70
Score: 7.00091
Sequence: ATAGTTGACTTAAATGCTCGGGAAT
Locus tag: PP0841
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PP0842
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PP0843
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PP0844
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PP0845
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PP0846
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PP0847
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PP0848
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -70 7 ATAGTTGACTTAAATGCTCGGGAAT PP0841
Pseudomonas stutzeri A1501
Position: -4
Score: 6.91741
Sequence: ATAGTTGACTCAAATACTCGGGAAT
Locus tag: PST_3043
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PST_3042
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PST_3041
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PST_3040
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PST_3039
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PST_3038
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PST_3037
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PST_3036
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -4 6.9 ATAGTTGACTCAAATACTCGGGAAT PST_3043
Pseudomonas syringae pv. tomato str. DC3000
Position: -65
Score: 7.12008
Sequence: ATAGTTGACTAATTTGCTCGGGAAT
Locus tag: PSPTO1422
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PSPTO1423
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PSPTO1424
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PSPTO1425
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PSPTO1426
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PSPTO1427
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PSPTO1428
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PSPTO1429
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -65 7.1 ATAGTTGACTAATTTGCTCGGGAAT PSPTO1422
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