Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hypN gene

Properties
Regulog: HypR - Rhizobiales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline
Phylum: Proteobacteria/alpha
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -100
Score: 4.18237
Sequence: TTTTGTATACTCAT
Locus tag: Atu4678
Name: hypM
Funciton: Predicted hydroxyproline ABC transporter, substrate-binding protein
Locus tag: Atu4679
Name: hypN
Funciton: Predicted hydroxyproline ABC transporter, permease protein
Locus tag: Atu4680
Name: hypP
Funciton: Predicted hydroxyproline ABC transporter, permease protein
Locus tag: Atu4681
Name: hypQ
Funciton: Predicted hydroxyproline ABC transporter, ATP-binding protein
Locus tag: Atu4682
Name: hypO
Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
Locus tag: Atu4683
Name: hypX
Funciton: Putative citrate/isocitrate isomerase or aconitase ## predicted from clustering to proline racemase
Locus tag: Atu4684
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8), possible pseudogene, inactive
hypM-hypN-hypP-hypQ-hypO-hypX-hypY -100 4.2 TTTTGTATACTCAT Atu4678
Sinorhizobium meliloti 1021
Position: -101
Score: 4.50138
Sequence: TTTTGTATACTAAT
Locus tag: SMb20263
Name: hypM
Funciton: Predicted hydroxyproline ABC transporter, substrate-binding protein
Locus tag: SMb20264
Name: hypN
Funciton: Predicted hydroxyproline ABC transporter, permease protein
Locus tag: SMb20265
Name: hypP
Funciton: Predicted hydroxyproline ABC transporter, permease protein
Locus tag: SMb20266
Name: hypQ
Funciton: Predicted hydroxyproline ABC transporter, ATP-binding protein
Locus tag: SMb20267
Name: hypO
Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
Locus tag: SMb20268
Name: hypE
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Locus tag: SMb20269
Name: hypX
Funciton: Putative citrate/isocitrate isomerase or aconitase ## predicted from clustering to proline racemase
Locus tag: SMb20270
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8), possible pseudogene, inactive
Locus tag: SMb20271
Name: hypZ
Funciton: OsmC/Ohr family protein
hypM-hypN-hypP-hypQ-hypO-hypE-hypX-hypY-hypZ -101 4.5 TTTTGTATACTAAT SMb20263