Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hypD gene

Properties
Regulog: HypR - Alteromonadales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Phylum: Proteobacteria/gamma
Built upon 21 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -45
Score: 4.7364
Sequence: ACTGTATACAAT
Locus tag: ATW7_13098
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
hypD -45 4.7 ACTGTATACAAT ATW7_13098
Colwellia psychrerythraea 34H
Position: -100
Score: 5.32149
Sequence: ATTGTATACAAT
Locus tag: CPS_1449
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: CPS_1450
Name: hypE
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
hypD-hypE -100 5.3 ATTGTATACAAT CPS_1449
Pseudoalteromonas tunicata D2
Position: -65
Score: 5.01168
Sequence: ATTGCATACAAT
Locus tag: PTD2_14397
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: PTD2_14402
Name: hypE
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Locus tag: PTD2_14407
Name: hypH
Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
Locus tag: PTD2_14412
Name: hypR
Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
hypD-hypE-hypH-hypR -65 5 ATTGCATACAAT PTD2_14397