Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pepD gene

Properties
Regulog: HexR - Vibrionales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Built upon 190 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -713
Score: 4.98797
Sequence: CGTAACTTAATTACA
Position: -639
Score: 4.46998
Sequence: TGAAAGTTTATTACA
Locus tag: PBPRA0833
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -713 5 CGTAACTTAATTACA PBPRA0833
-639 4.5 TGAAAGTTTATTACA
Vibrio angustum S14
Position: -364
Score: 4.4038
Sequence: CGTAATTAACTTTCA
Locus tag: VAS14_16781
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -364 4.4 CGTAATTAACTTTCA VAS14_16781
Vibrio cholerae O1 biovar eltor str. N16961
Position: -211
Score: 4.64763
Sequence: AGAAATTAAATTACA
Position: -136
Score: 5.10079
Sequence: AGTAATTTAATTACA
Locus tag: VC2279
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -211 4.6 AGAAATTAAATTACA VC2279
-136 5.1 AGTAATTTAATTACA
Vibrio fischeri ES114
Position: -275
Score: 4.64763
Sequence: AGAAATTAAATTACA
Position: -200
Score: 5.3748
Sequence: TGTAATTTTATTACG
Locus tag: VF_0736
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -275 4.6 AGAAATTAAATTACA VF_0736
-200 5.4 TGTAATTTTATTACG
Vibrio harveyi ATCC BAA-1116
Position: -330
Score: 4.64763
Sequence: AGAAATTTAATTACA
Position: -256
Score: 5.70329
Sequence: TGTAATTAAATTACA
Locus tag: VIBHAR_01157
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -330 4.6 AGAAATTTAATTACA VIBHAR_01157
-256 5.7 TGTAATTAAATTACA
Vibrio parahaemolyticus RIMD 2210633
Position: -329
Score: 4.64763
Sequence: AGAAATTTAATTACA
Position: -255
Score: 5.70329
Sequence: TGTAATTAAATTACA
Locus tag: VP0671
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -329 4.6 AGAAATTTAATTACA VP0671
-255 5.7 TGTAATTAAATTACA
Vibrio salmonicida LFI1238
Position: -272
Score: 4.60099
Sequence: TGAAACTTTATTACA
Position: -198
Score: 4.12225
Sequence: CGTAACTAAATAACG
Locus tag: VSAL_I0973
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -272 4.6 TGAAACTTTATTACA VSAL_I0973
-198 4.1 CGTAACTAAATAACG
Vibrio splendidus LGP32
Position: -605
Score: 4.52254
Sequence: TGTAAAATAATTCCA
Position: -256
Score: 5.50596
Sequence: CGTAATTAAATTACA
Locus tag: VS_2422
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -605 4.5 TGTAAAATAATTCCA VS_2422
-256 5.5 CGTAATTAAATTACA
Vibrio vulnificus CMCP6
Position: -331
Score: 4.51647
Sequence: AGAAATTTTATTACA
Position: -257
Score: 5.3997
Sequence: GGTAATTAAATTACA
Locus tag: VV1_0333
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -331 4.5 AGAAATTTTATTACA VV1_0333
-257 5.4 GGTAATTAAATTACA