Orthologous regulated operons containing nirD gene

Properties
Regulog:	HexR - Vibrionales
Regulator type:	Transcription factor
Regulator family:	RpiR
Regulation mode:	repressor (activator)
Biological process:	Central carbohydrate metabolism
Effector:	2-keto-3-deoxy-6-phosphogluconate
Phylum:	Proteobacteria/gamma

Built upon 190 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -174 Score: 5.18531 Sequence: TGTAATTTAGTTACA Locus tag: PBPRA1428 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: PBPRA1427 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-174	5.2	TGTAATTTAGTTACA	PBPRA1428
Vibrio fischeri ES114
Position: -184 Score: 5.03594 Sequence: TGTAAAAAAACTACA Locus tag: VF_0776 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VF_0775 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-184	5	TGTAAAAAAACTACA	VF_0776
Vibrio parahaemolyticus RIMD 2210633
Position: -84 Score: 4.90416 Sequence: TGTAATTGATTTACA Locus tag: VPA0987 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VPA0986 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-84	4.9	TGTAATTGATTTACA	VPA0987
Vibrio salmonicida LFI1238
Position: -184 Score: 5.22925 Sequence: TGTAATAAAACTACG Position: -77 Score: 4.56127 Sequence: CGTAATTGATCTACA Locus tag: VSAL_I0798 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VSAL_I0797 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-184	5.2	TGTAATAAAACTACG	VSAL_I0798
	-77	4.6	CGTAATTGATCTACA
Vibrio shilonii AK1
Position: -265 Score: 4.90875 Sequence: TGTAGGTAAATTACA Position: -84 Score: 4.90416 Sequence: TGTAATTGATTTACA Locus tag: VSAK1_05765 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VSAK1_05770 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-265	4.9	TGTAGGTAAATTACA	VSAK1_05765
	-84	4.9	TGTAATTGATTTACA
Vibrio splendidus LGP32
Position: -85 Score: 4.70682 Sequence: CGTAATTGATTTACA Locus tag: VS_II0668 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VS_II0669 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-85	4.7	CGTAATTGATTTACA	VS_II0668
Vibrio vulnificus CMCP6
Position: -231 Score: 4.59717 Sequence: TGAAAAAATATTACA Position: -82 Score: 4.70682 Sequence: CGTAATTGATTTACA Locus tag: VV20370 Name: nirB Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: VV20369 Name: nirD Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD	-231	4.6	TGAAAAAATATTACA	VV20370
	-82	4.7	CGTAATTGATTTACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing nirD gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --