Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nirB gene

Properties
Regulog: HexR - Vibrionales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Built upon 190 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -174
Score: 5.18531
Sequence: TGTAATTTAGTTACA
Locus tag: PBPRA1428
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: PBPRA1427
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -174 5.2 TGTAATTTAGTTACA PBPRA1428
Vibrio fischeri ES114
Position: -184
Score: 5.03594
Sequence: TGTAAAAAAACTACA
Locus tag: VF_0776
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VF_0775
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -184 5 TGTAAAAAAACTACA VF_0776
Vibrio parahaemolyticus RIMD 2210633
Position: -84
Score: 4.90416
Sequence: TGTAATTGATTTACA
Locus tag: VPA0987
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VPA0986
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -84 4.9 TGTAATTGATTTACA VPA0987
Vibrio salmonicida LFI1238
Position: -184
Score: 5.22925
Sequence: TGTAATAAAACTACG
Position: -77
Score: 4.56127
Sequence: CGTAATTGATCTACA
Locus tag: VSAL_I0798
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VSAL_I0797
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -184 5.2 TGTAATAAAACTACG VSAL_I0798
-77 4.6 CGTAATTGATCTACA
Vibrio shilonii AK1
Position: -265
Score: 4.90875
Sequence: TGTAGGTAAATTACA
Position: -84
Score: 4.90416
Sequence: TGTAATTGATTTACA
Locus tag: VSAK1_05765
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VSAK1_05770
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -265 4.9 TGTAGGTAAATTACA VSAK1_05765
-84 4.9 TGTAATTGATTTACA
Vibrio splendidus LGP32
Position: -85
Score: 4.70682
Sequence: CGTAATTGATTTACA
Locus tag: VS_II0668
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VS_II0669
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -85 4.7 CGTAATTGATTTACA VS_II0668
Vibrio vulnificus CMCP6
Position: -231
Score: 4.59717
Sequence: TGAAAAAATATTACA
Position: -82
Score: 4.70682
Sequence: CGTAATTGATTTACA
Locus tag: VV20370
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VV20369
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nirB-nirD -231 4.6 TGAAAAAATATTACA VV20370
-82 4.7 CGTAATTGATTTACA