Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cobD gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anoxybacillus flavithermus WK1
Position: -396
Score: 131.85
Sequence: TATGTCCGTTGCAAA...
Locus tag: Aflv_1041
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Aflv_1042
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Aflv_1043
Name: btuD-cbiZ
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Aflv_1044
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Aflv_1045
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Aflv_1046
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Aflv_1047
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Aflv_1048
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: Aflv_1049
Name: cobU2
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Aflv_1050
Name: pduO
Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
Locus tag: Aflv_1051
Name: cblT
Funciton: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
Locus tag: Aflv_1052
Name: cblS
Funciton: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
btuF-btuC-btuD-cbiZ-cbiB-cobD-cobU-cobS-cobC-cobU2-pduO-cblT-cblS -396 131.9 TATGTCCGTTGCAAA... Aflv_1041
Bacillus halodurans C-125
Position: -407
Score: 118.66
Sequence: CGTATATCGCGCTGA...
Locus tag: BH1585
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: BH1586
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: BH1587
Name: btuD-cbiZ
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: BH1588
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: BH1589
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: BH1590
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: BH1591
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: BH1592
Name: cobS
Funciton: Cobalamin synthase
Locus tag: BH1593
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: BH1594
Name: cobU2
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: BH1595
Name: pduO
Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
btuF-btuC-btuD-cbiZ-cbiB-cobD-cobU-cbiP-cobS-cobC-cobU2-pduO -407 118.7 CGTATATCGCGCTGA... BH1585
Geobacillus kaustophilus HTA426
Position: -341
Score: 122.23
Sequence: CTAAATCAACTCGCA...
Locus tag: GK2266
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: GK2265
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: GK2264
Name: btuD-cbiZ
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: GK2263
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: GK2262
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: GK2261
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: GK2260
Name: cobS
Funciton: Cobalamin synthase
Locus tag: GK2259
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: GK2258
Name: cobU2
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: GK2257
Name: pduO
Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
Locus tag: GK2256
Name: cblT
Funciton: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
Locus tag: GK2255
Name: cblS
Funciton: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
btuF-btuC-btuD-cbiZ-cbiB-cobD-cobU-cobS-cobC-cobU2-pduO-cblT-cblS -341 122.2 CTAAATCAACTCGCA... GK2266
Paenibacillus sp. JDR-2
Position: -357
Score: 95.13
Sequence: ACGAATAAATCATGG...
Locus tag: Pjdr2_3355
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Pjdr2_3354
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Pjdr2_3353
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Pjdr2_3352
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Pjdr2_3351
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Pjdr2_3350
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Pjdr2_3349
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Pjdr2_3348
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Pjdr2_3347
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
btuF-btuC-btuD-cobT-cobU-cbiB-cobS-cobD-cbiZ -357 95.1 ACGAATAAATCATGG... Pjdr2_3355