Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribD gene

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Macrococcus caseolyticus JCSC5402
Position: -138
Score: 112.41
Sequence: AGGACACCATTAAGC...
Locus tag: MCCL_1455
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: MCCL_1454
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: MCCL_1453
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: MCCL_1452
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -138 112.4 AGGACACCATTAAGC... MCCL_1455
Staphylococcus aureus subsp. aureus N315
Position: -128
Score: 123.35
Sequence: GTTAATTATCGACAA...
Locus tag: SA1589
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SA1588
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SA1587
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SA1586
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -128 123.3 GTTAATTATCGACAA... SA1589
Staphylococcus capitis SK14
Position: -134
Score: 119.23
Sequence: ATAATTACTCGACAA...
Locus tag: STACA0001_0662
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: STACA0001_0661
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: STACA0001_0660
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: STACA0001_0659
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -134 119.2 ATAATTACTCGACAA... STACA0001_0662
Staphylococcus carnosus subsp. carnosus TM300
Position: -176
Score: 124.43
Sequence: GAAGACGTCATTAAA...
Locus tag: Sca_1375
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Sca_1374
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Sca_1373
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Sca_1372
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -176 124.4 GAAGACGTCATTAAA... Sca_1375
Staphylococcus epidermidis ATCC 12228
Position: -151
Score: 115.42
Sequence: TTGAATTATCGACTT...
Locus tag: SE1441
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SE1440
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SE1439
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SE1438
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -151 115.4 TTGAATTATCGACTT... SE1441
Staphylococcus haemolyticus JCSC1435
Position: -280
Score: 115.43
Sequence: AATTCTTTCGGGGCG...
Locus tag: SH1153
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SH1154
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SH1155
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SH1156
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -280 115.4 AATTCTTTCGGGGCG... SH1153
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -293
Score: 124.96
Sequence: TATTCTTTCGGGGCA...
Locus tag: SSP0995
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SSP0996
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SSP0997
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SSP0998
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -293 125 TATTCTTTCGGGGCA... SSP0995
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