Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bioD gene

Properties
Regulog: BirA - Enterobacteriales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/gamma
Built upon 27 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -79
Score: 9.08123
Sequence: TTGTAAACC-(16)-GGTTTACGA
Locus tag: CKO_02353
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: CKO_02352
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: CKO_02351
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: CKO_02350
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -79 9.1 TTGTAAACC-(16)-GGTTTACGA CKO_02353
Edwardsiella tarda EIB202
Position: -94
Score: 8.79814
Sequence: CTGTAAACC-(16)-GGTTGACAT
Locus tag: ETAE_2554
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: ETAE_2553
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: ETAE_2552
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: ETAE_2551
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: ETAE_2550
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioF-bioC-bioD -94 8.8 CTGTAAACC-(16)-GGTTGACAT ETAE_2554
Enterobacter sp. 638
Position: -79
Score: 8.66221
Sequence: TTGTAAACC-(16)-GGTTTACCA
Locus tag: Ent638_1266
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Ent638_1267
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Ent638_1268
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: Ent638_1269
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -79 8.7 TTGTAAACC-(16)-GGTTTACCA Ent638_1266
Erwinia amylovora ATCC 49946
Position: -80
Score: 9.03293
Sequence: TTGTAAACC-(15)-AGTTTACAA
Locus tag: EAM_1210
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: EAM_1211
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: EAM_1212
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: EAM_1213
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -80 9 TTGTAAACC-(15)-AGTTTACAA EAM_1210
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -86
Score: 8.65482
Sequence: TCGTAAACC-(16)-GGTTGACAG
Locus tag: ECA2825
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: ECA2824
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: ECA2823
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: ECA2822
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -86 8.7 TCGTAAACC-(16)-GGTTGACAG ECA2825
Escherichia coli str. K-12 substr. MG1655
Position: -79
Score: 9.43903
Sequence: TTGTAAACC-(16)-GGTTTACAA
Locus tag: b0775
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: b0776
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: b0777
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: b0778
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -79 9.4 TTGTAAACC-(16)-GGTTTACAA b0775
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -230
Score: 9.43903
Sequence: TTGTAAACC-(16)-GGTTTACAA
Locus tag: KPN_00800
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: KPN_00801
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: KPN_00802
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: KPN_00803
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -230 9.4 TTGTAAACC-(16)-GGTTTACAA KPN_00800
Photorhabdus luminescens subsp. laumondii TTO1
Position: -86
Score: 8.44034
Sequence: ACGTAAACC-(15)-GGTTGACAG
Locus tag: plu1485
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: plu1486
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: plu1487
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: plu1488
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -86 8.4 ACGTAAACC-(15)-GGTTGACAG plu1485
Proteus mirabilis HI4320
Position: -85
Score: 8.39204
Sequence: ATGTAAACC-(16)-AGTTGACAT
Locus tag: PMI0603
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PMI0604
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PMI0605
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PMI0606
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -85 8.4 ATGTAAACC-(16)-AGTTGACAT PMI0603
Salmonella typhimurium LT2
Position: -79
Score: 9.08123
Sequence: TTGTAAACC-(16)-GGTTTACGA
Locus tag: STM0794
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: STM0795
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: STM0796
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: STM0797
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -79 9.1 TTGTAAACC-(16)-GGTTTACGA STM0794
Serratia proteamaculans 568
Position: -88
Score: 9.01262
Sequence: TTGTAAACC-(16)-GGTTgACAg
Locus tag: Spro_1311
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Spro_1312
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Spro_1313
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: Spro_1314
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -88 9 TTGTAAACC-(16)-GGTTgACAg Spro_1311
Yersinia pestis KIM
Position: -89
Score: 9.01262
Sequence: TTGTAAACC-(16)-GGTTGACAG
Locus tag: y3031
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: y3030
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: y3029
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: y3028
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -89 9 TTGTAAACC-(16)-GGTTGACAG y3031
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