Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cydB gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Edwardsiella tarda EIB202
Position: -222
Score: 3.64631
Sequence: TATTGTTATATTTGTTATCTTT
Locus tag: ETAE_2580
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: ETAE_2579
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: ETAE_2578
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgE -222 3.6 TATTGTTATATTTGTTATCTTT ETAE_2580
Escherichia coli str. K-12 substr. MG1655
Position: -300
Score: 3.62694
Sequence: TAAATTGTTCTCGATCAAATTG
Position: -255
Score: 3.625
Sequence: TAAATTGATCACCGTCGAAAAA
Locus tag: b0733
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: b0734
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: b4515
Name: ybgT
Funciton: hypothetical protein
Locus tag: b0735
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgT-ybgE -300 3.6 TAAATTGTTCTCGATCAAATTG b0733
-255 3.6 TAAATTGATCACCGTCGAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -252
Score: 3.64742
Sequence: TATATTGATCACCGTCGAAAAA
Locus tag: KPN_00736
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: KPN_00737
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: KPN_00738
Name: ybgT
Funciton: hypothetical protein
Locus tag: KPN_00739
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgT-ybgE -252 3.6 TATATTGATCACCGTCGAAAAA KPN_00736
Proteus mirabilis HI4320
Position: -247
Score: 3.76546
Sequence: AAATATGCTGTTACTAACCTAA
Locus tag: PMI0573
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: PMI0574
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: PMI0575
Name: ybgT
Funciton: hypothetical protein
Locus tag: PMI0576
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgT-ybgE -247 3.8 AAATATGCTGTTACTAACCTAA PMI0573
Salmonella typhimurium LT2
Position: -256
Score: 3.72571
Sequence: TAAATTGATCGCTGTCGAAAAA
Locus tag: STM0740
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: STM0741
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: STM0742
Name: ybgT
Funciton: hypothetical protein
Locus tag: STM0743
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgT-ybgE -256 3.7 TAAATTGATCGCTGTCGAAAAA STM0740
Serratia proteamaculans 568
Position: -300
Score: 3.67893
Sequence: AAGTCTAACCCACATCACGTAA
Locus tag: Spro_1271
Name: cydA
Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: Spro_1272
Name: cydB
Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: Spro_1273
Name: ybgT
Funciton: hypothetical protein
Locus tag: Spro_1274
Name: ybgE
Funciton: hypothetical protein
cydA-cydB-ybgT-ybgE -300 3.7 AAGTCTAACCCACATCACGTAA Spro_1271