Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing clpA gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -164
Score: 3.96009
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -135
Score: 4.17764
Sequence: TAATGTGACAGATGTCGCGGAT
Locus tag: CKO_02199
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: CKO_02198
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -164 4 AAATTTGAAGCAGTTAACGCTA CKO_02199
-135 4.2 TAATGTGACAGATGTCGCGGAT
Edwardsiella tarda EIB202
Position: -164
Score: 3.80968
Sequence: AAGTTTGAGGCAGTTAACGCAA
Position: -144
Score: 3.62804
Sequence: AATTGTGCGGCAGTGCGCTTTT
Locus tag: ETAE_2208
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: ETAE_2207
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -164 3.8 AAGTTTGAGGCAGTTAACGCAA ETAE_2208
-144 3.6 AATTGTGCGGCAGTGCGCTTTT
Enterobacter sp. 638
Position: -161
Score: 3.93333
Sequence: ATTTTTGAAGCAGTTAACGCTA
Position: -132
Score: 3.79092
Sequence: GAATGTGACAGATATCGCGGAT
Locus tag: Ent638_1398
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: Ent638_1399
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -161 3.9 ATTTTTGAAGCAGTTAACGCTA Ent638_1398
-132 3.8 GAATGTGACAGATATCGCGGAT
Erwinia amylovora ATCC 49946
Position: -161
Score: 3.96009
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -132
Score: 4.50465
Sequence: TTTTGTGATAGAGGTCGCTATT
Locus tag: EAM_1320
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: EAM_1321
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -161 4 AAATTTGAAGCAGTTAACGCTA EAM_1320
-132 4.5 TTTTGTGATAGAGGTCGCTATT
Escherichia coli str. K-12 substr. MG1655
Position: -164
Score: 3.96009
Sequence: AAATTTGAAGCAGTTAACGCTA
Locus tag: b0881
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: b0882
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -164 4 AAATTTGAAGCAGTTAACGCTA b0881
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -167
Score: 3.96009
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -77
Score: 4.31914
Sequence: ATTTGTGATGAGCATAACCTCT
Locus tag: KPN_00914
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: KPN_00915
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -167 4 AAATTTGAAGCAGTTAACGCTA KPN_00914
-77 4.3 ATTTGTGATGAGCATAACCTCT
Photorhabdus luminescens subsp. laumondii TTO1
Position: -170
Score: 4.34805
Sequence: AAGTTTGATATAGATAACGATA
Locus tag: plu1593
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: plu1594
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -170 4.3 AAGTTTGATATAGATAACGATA plu1593
Proteus mirabilis HI4320
Position: -268
Score: 3.74415
Sequence: TGTCTTTATTTACTTAACATTA
Position: -148
Score: 4.06448
Sequence: AACTTTGATGTAGCTAACGCTT
Locus tag: PMI0689
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: PMI0690
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -268 3.7 TGTCTTTATTTACTTAACATTA PMI0689
-148 4.1 AACTTTGATGTAGCTAACGCTT
Salmonella typhimurium LT2
Position: -164
Score: 3.96009
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -104
Score: 3.59584
Sequence: AGATGTTAGTTATCTATCAATT
Locus tag: STM0944
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: STM0945
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -164 4 AAATTTGAAGCAGTTAACGCTA STM0944
-104 3.6 AGATGTTAGTTATCTATCAATT
Serratia proteamaculans 568
Position: -176
Score: 3.59376
Sequence: AAGTTTGAAGCAGGTAACGCTA
Locus tag: Spro_1673
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: Spro_1674
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS-clpA -176 3.6 AAGTTTGAAGCAGGTAACGCTA Spro_1673