Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuD gene

Properties
Regulog: LiuQ - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 14 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -215
Score: 4.6206
Sequence: TTGAGTCAACCTCAA
Position: -50
Score: 4.79966
Sequence: TTGAGTTGTGCTCAA
Locus tag: RALTA_A1548
Name: null
Funciton: AMP-dependent synthetase and ligase
Locus tag: RALTA_A1549
Name: null
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: RALTA_A1550
Name: null
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
RALTA_A1548-RALTA_A1549-RALTA_A1550 -215 4.6 TTGAGTCAACCTCAA RALTA_A1548
-50 4.8 TTGAGTTGTGCTCAA
Ralstonia eutropha H16
Position: -234
Score: 5.34882
Sequence: TTGAGCTTTACTCAA
Position: -59
Score: 5.022
Sequence: TTGAGTAACACTCAC
Locus tag: H16_A1971
Name: h16_A1971
Funciton: AMP-dependent synthetase and ligase
Locus tag: H16_A1972
Name: ivd2
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: H16_A1973
Name: h16_A1973
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: H16_A1974
Name: h16_A1974
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
h16_A1971-ivd2-h16_A1973-h16_A1974 -234 5.3 TTGAGCTTTACTCAA H16_A1971
-59 5 TTGAGTAACACTCAC
Ralstonia eutropha JMP134
Position: -167
Score: 4.99667
Sequence: TTGACCAACACTCAA
Position: -59
Score: 5.27274
Sequence: TTGAGCTACGCTCAA
Locus tag: Reut_A1467
Name: null
Funciton: AMP-dependent synthetase and ligase
Locus tag: Reut_A1466
Name: null
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Reut_A1465
Name: null
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Reut_A1464
Name: null
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Reut_A1463
Name: null
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A1462
Name: null
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Reut_A1467-Reut_A1466-Reut_A1465-Reut_A1464-Reut_A1463-Reut_A1462 -167 5 TTGACCAACACTCAA Reut_A1467
-59 5.3 TTGAGCTACGCTCAA
Ralstonia metallidurans CH34
Position: -149
Score: 5.11817
Sequence: TTGAATGTTACTCAA
Position: -48
Score: 5.58543
Sequence: TTGAGTATTACTCAA
Locus tag: Rmet_0610
Name: null
Funciton: AMP-dependent synthetase and ligase
Locus tag: Rmet_0609
Name: null
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Rmet_0608
Name: null
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Rmet_0610-Rmet_0609-Rmet_0608 -149 5.1 TTGAATGTTACTCAA Rmet_0610
-48 5.6 TTGAGTATTACTCAA