# TF - RpoH: DESPIG_01221
>DESPIG_02499(rpoZ) Score=6.1 Pos=-147 [Desulfovibrio piger ATCC 29098]
CTTGACA------------ACCAAT
>DESPIG_01221(rpoH) Score=5.5 Pos=-247 [Desulfovibrio piger ATCC 29098]
CCGGAAG------------CCCCAT
# TF - PhoB: DESPIG_03037
>DESPIG_00907 Score=4.4 Pos=-41 [Desulfovibrio piger ATCC 29098]
GTGTAACCTACTCGTCAC
>DESPIG_00907 Score=3.8 Pos=-30 [Desulfovibrio piger ATCC 29098]
TCGTCACATCATTGACGC
>DESPIG_00907 Score=3.9 Pos=-19 [Desulfovibrio piger ATCC 29098]
TTGACGCGAGGTCGTAAC
>DESPIG_03037(phoB) Score=4.1 Pos=-147 [Desulfovibrio piger ATCC 29098]
TTGTTACGAAAATGTGAC
>DESPIG_03037(phoB) Score=4.1 Pos=-91 [Desulfovibrio piger ATCC 29098]
TTTTTACGGCCCTGTCAC
>DESPIG_03037(phoB) Score=5.7 Pos=-80 [Desulfovibrio piger ATCC 29098]
CTGTCACACAATTGTAAC
>DESPIG_03036(pstS) Score=4.2 Pos=-149 [Desulfovibrio piger ATCC 29098]
GTGTGACAGGGCCGTAAA
>DESPIG_03036(pstS) Score=5.1 Pos=-93 [Desulfovibrio piger ATCC 29098]
GCGTCACATTTTCGTAAC
# TF - PerR: DESPIG_00983
>DESPIG_01431 Score=5.1 Pos=-31 [Desulfovibrio piger ATCC 29098]
ATTGAGAATCATTACTATT
>DESPIG_00983(perR) Score=4.7 Pos=-7 [Desulfovibrio piger ATCC 29098]
AATAGTAATGTTTATTAAA
>DESPIG_02487(rbO) Score=5.1 Pos=-143 [Desulfovibrio piger ATCC 29098]
ATTAAGAAAAATTACTATT
>DESPIG_02517(rbr2) Score=5.8 Pos=-64 [Desulfovibrio piger ATCC 29098]
AACAGGAATAGTTCCTGAT
# TF - NikR: DESPIG_01530
>DESPIG_00816(nikK) Score=5.2 Pos=-134 [Desulfovibrio piger ATCC 29098]
GTGTAAA-------------CTAACGC
# TF - TunR: DESPIG_00487
>DESPIG_00488(modA) Score=5 Pos=-99 [Desulfovibrio piger ATCC 29098]
TTGTCGCGCTTTTCGTATAATCCGTGCCTG
# TF - ArsR: DESPIG_02964
>DESPIG_02962 Score=5.2 Pos=-30 [Desulfovibrio piger ATCC 29098]
ATTTGGCAATTTTGCCAATA
>DESPIG_02962 Score=4.5 Pos=-22 [Desulfovibrio piger ATCC 29098]
ATTTTGCCAATAAGGAATAT
>DESPIG_02964(arsR) Score=5.6 Pos=-31 [Desulfovibrio piger ATCC 29098]
ATTTTGCCAAATGACCAAAT
# TF - Ddes_0528, DESPIG_03026: DESPIG_03026
>DESPIG_03025 Score=5.3 Pos=-107 [Desulfovibrio piger ATCC 29098]
CTGTGAAAAGATTCCCTG
>DESPIG_03025 Score=6.1 Pos=-87 [Desulfovibrio piger ATCC 29098]
TTGTGACGATGGTCACAG
# TF - Fur: DESPIG_03126
>DESPIG_00813 Score=5.3 Pos=-75 [Desulfovibrio piger ATCC 29098]
TTGAAATTCTTTTTCAA
>DESPIG_00813 Score=5.1 Pos=-81 [Desulfovibrio piger ATCC 29098]
TTGACATTGAAATTCTT
>DESPIG_00814 Score=5.7 Pos=-112 [Desulfovibrio piger ATCC 29098]
TTGACATTCATTTTCAA
>DESPIG_00069 Score=4.6 Pos=6 [Desulfovibrio piger ATCC 29098]
ATGACTTTCATCCTCAT
>DESPIG_00069 Score=4.6 Pos=0 [Desulfovibrio piger ATCC 29098]
ATGCAAATGACTTTCAT
>DESPIG_00020 Score=4.7 Pos=-63 [Desulfovibrio piger ATCC 29098]
TTGACATCAATTTTCAA
>DESPIG_02510 Score=4.8 Pos=0 [Desulfovibrio piger ATCC 29098]
ATGAAATTCTTTTTCTA
>DESPIG_02510 Score=5.1 Pos=-6 [Desulfovibrio piger ATCC 29098]
TTGAAAATGAAATTCTT
>DESPIG_00269 Score=5.3 Pos=28 [Desulfovibrio piger ATCC 29098]
TTGAAATTCTTTTTCAA
>DESPIG_00269 Score=5 Pos=22 [Desulfovibrio piger ATCC 29098]
TTGACTTTGAAATTCTT
>DESPIG_02348(copA) Score=5.7 Pos=-177 [Desulfovibrio piger ATCC 29098]
TTGATTTTCATTTTCAA
>DESPIG_02348(copA) Score=4.3 Pos=-183 [Desulfovibrio piger ATCC 29098]
CACATATTGATTTTCAT
>DESPIG_02348(copA) Score=4.2 Pos=-225 [Desulfovibrio piger ATCC 29098]
TTGACTTTGAGGATCTT
>DESPIG_01861 Score=4.7 Pos=-32 [Desulfovibrio piger ATCC 29098]
ATGAAATTCAATTTATT
>DESPIG_01861 Score=5.5 Pos=-38 [Desulfovibrio piger ATCC 29098]
TTGAAAATGAAATTCAA
>DESPIG_01980 Score=5.3 Pos=-50 [Desulfovibrio piger ATCC 29098]
TTGAATTTCTTTTTCAT
>DESPIG_01980 Score=5.3 Pos=-56 [Desulfovibrio piger ATCC 29098]
TTGACATTGAATTTCTT
>DESPIG_01466(fld) Score=4.7 Pos=-52 [Desulfovibrio piger ATCC 29098]
TTGAATTTCTTTTTCTA
>DESPIG_01466(fld) Score=5.4 Pos=-58 [Desulfovibrio piger ATCC 29098]
TTGAAATTGAATTTCTT
>DESPIG_01418(feoA) Score=5 Pos=-188 [Desulfovibrio piger ATCC 29098]
ATGAAAGTGATTTTCTT
# TF - DVU2644: DESPIG_01491
>DESPIG_01491 Score=5.7 Pos=-204 [Desulfovibrio piger ATCC 29098]
CGAATGTCGACATACT
>DESPIG_01491 Score=6.1 Pos=-282 [Desulfovibrio piger ATCC 29098]
CGAATGTCGACATTTT
>DESPIG_01488 Score=6.1 Pos=-49 [Desulfovibrio piger ATCC 29098]
AAAATGTCGACATTCG
>DESPIG_01488 Score=5.7 Pos=-127 [Desulfovibrio piger ATCC 29098]
AGTATGTCGACATTCG
# TF - SahR: DESPIG_01931
>DESPIG_01931(sahR) Score=5.8 Pos=-83 [Desulfovibrio piger ATCC 29098]
ATATCCAGATAGGCTGATAT
>DESPIG_01931(sahR) Score=4.1 Pos=-61 [Desulfovibrio piger ATCC 29098]
GCATCAAGCAAATTTGATAC
>DESPIG_02490(metF) Score=6.2 Pos=-73 [Desulfovibrio piger ATCC 29098]
TTATCAAGTTATATTGATAT
>DESPIG_01871(panC) Score=6.1 Pos=-18 [Desulfovibrio piger ATCC 29098]
ATATCACCATACCTTGATAT
>DESPIG_01871(panC) Score=4.2 Pos=-10 [Desulfovibrio piger ATCC 29098]
ATACCTTGATATGCAGATAT
# TF - DvMF_1708: DESPIG_02293
>DESPIG_02289 Score=5.7 Pos=-86 [Desulfovibrio piger ATCC 29098]
CTATCGGCGGGCTGATAG
# TF - DESPIG_02495: DESPIG_02495
>DESPIG_02495 Score=6.3 Pos=-89 [Desulfovibrio piger ATCC 29098]
TAAAACTATAAAACTAGTTTTT
>DESPIG_02495 Score=6.8 Pos=-81 [Desulfovibrio piger ATCC 29098]
TAAAACTAGTTTTTTAGTTGAC
>DESPIG_02495 Score=6.8 Pos=-55 [Desulfovibrio piger ATCC 29098]
TGAAACTACTTTTTTAGTTTGA
# RNA - FMN
>DESPIG_01856(ribB) Score=95 Pos=-271 [Desulfovibrio piger ATCC 29098]
TCCATTCTCAGGGCGGGGTGCAAGTCCCCACCGGCGGTGATGGCGGTTTTCCGCATGAGCCCGCGAGCGCCGTACCATGCAACGTGGTGCGGGTCAGCAGATACCGGTGAGATCCCGGAGCCGACGGTAACAGTCCGGATGAAAGAGAACGGTTCG
# RNA - TPP
>DESPIG_01371(thiC) Score=61.3 Pos=-162 [Desulfovibrio piger ATCC 29098]
GCCCGCCAGCTAGGGGAGCCGTGAACGGCAGTTGCACGGCTGAGAGTGGGATAGTCCCAGACCCTGTGAACCTGACGCAGTTCGCACTGCCGTAGGGAAGCTGAGCCGCACCCGC
>DESPIG_02760(thiS) Score=19.6 Pos=-127 [Desulfovibrio piger ATCC 29098]
GCCGTGCGGCCCTGCACCTGATGCAGATAGTGCTGTCGAAGGGAAGCTGGCAACGTGCGCT
>DESPIG_02760(thiS) Score=15.4 Pos=-179 [Desulfovibrio piger ATCC 29098]
TGGGGGAGCCTGCGGGCTGAGAAAGGGTGCAAGGACCCTGACCCC
# RNA - Cobalamin
>DESPIG_00414(btuC) Score=83.1 Pos=-106 [Desulfovibrio piger ATCC 29098]
TAGAGTAGCGCGTCCATGGTCGCCGGAACCTGCCGGCGTCAAAAGGGAATCCCGTGAGAATCGGGAGCGGACCCGCCGCCGTAAGGCCCGCAGACCAGCTTCCTTCATGTGCCACTGGCAACGGGAAGGCCGGAAGCCGGGGGCCGAGCCGGAATACCTGCCGTGGACCGTGGCCGTTGGCC
>DESPIG_01756(cbiK2) Score=47.8 Pos=-220 [Desulfovibrio piger ATCC 29098]
CCCAAACCGTTTCTGATGGCGCAGCCATGCGGGGAATTCCGTGTGAATCGGAAACAGTCGCGCTGCGGTAAGAGGGTACGGAGCTTCTTTGGCGACACGCCACGACAGCCAGCCGTCACGGTGAAGGCGAAGCAAAGGCCCGGAGGCATGCCTCCCCATTCCCTCAAGTCCGAATACCCGCCCCATCCCCAACCTTTCAACG
>DESPIG_00246(nrdD) Score=71.6 Pos=-330 [Desulfovibrio piger ATCC 29098]
CATCTTGAGCGGGCAGAAGCGCTGCTACGAGCTTCATCGGGAATCCCGTGAGATCCGGGAGCGGACCCGCCGCCGTAAGTCGCAGAACCTGCTCCCCCCGTGTGCCACTGGCAGCCGCCGGGAAGGCCGAGAGCAGGGTGACGAGCCGGAAGACCTGCTTCTGCCGCTTGTCCATGGGG
# RNA - yybP-ykoY
>DESPIG_02522(COG0530) Score=58 Pos=-173 [Desulfovibrio piger ATCC 29098]
TCCGCACCTAAGGGGAGTAACTGGGTCCTTGAGACCCTGGCAGCATCAACAGCCTGACATATCGTCTGGTGCTGCCGTTGGCCCTGCCGACTAGTGAGACCTTGGCCGCATGACT
# TF - Rex: DESPIG_02066
>DESPIG_02071(atpI1) Score=4.7 Pos=-11 [Desulfovibrio piger ATCC 29098]
ATTGTGATAATTTGTACATT
>DESPIG_02241(sat) Score=5.4 Pos=-82 [Desulfovibrio piger ATCC 29098]
TTTGTTAGATTATTCACAAG
>DESPIG_02774(apsB) Score=4.4 Pos=-142 [Desulfovibrio piger ATCC 29098]
CTTGTTACTAAAAACACAAG
>DESPIG_01072(ppaC) Score=4.6 Pos=-101 [Desulfovibrio piger ATCC 29098]
CTTGTGCTAAAGGTAACAAG
>DESPIG_01460(adk) Score=4.7 Pos=-55 [Desulfovibrio piger ATCC 29098]
TCTGTTCTTTTTTGCACAAA
>DESPIG_02016(atpF1) Score=5 Pos=-99 [Desulfovibrio piger ATCC 29098]
TTTGCGAATTTTGTCACCAA
# TF - DVU2275: DESPIG_02141
>DESPIG_02142 Score=5.2 Pos=-192 [Desulfovibrio piger ATCC 29098]
CATTAAAATTTCTTT
>DESPIG_02142 Score=5.5 Pos=-213 [Desulfovibrio piger ATCC 29098]
AGAGAAAGTTTTTTT
# TF - DVU2827: DESPIG_02851
>DESPIG_02849 Score=5.2 Pos=-208 [Desulfovibrio piger ATCC 29098]
TGATGCATTTTAGCATCA
>DESPIG_02849 Score=4.9 Pos=-157 [Desulfovibrio piger ATCC 29098]
AGGCGCAGATTTGCATCA
>DESPIG_02849 Score=5.3 Pos=-332 [Desulfovibrio piger ATCC 29098]
GGGTGCAAAAATGCATCA
>DESPIG_02848 Score=4.9 Pos=-356 [Desulfovibrio piger ATCC 29098]
TGATGCAAATCTGCGCCT
>DESPIG_02848 Score=5.2 Pos=-305 [Desulfovibrio piger ATCC 29098]
TGATGCTAAAATGCATCA
>DESPIG_02849 Score=4.4 Pos=-89 [Desulfovibrio piger ATCC 29098]
TGTTACAAAAATGGCACA
>DESPIG_02848 Score=5.3 Pos=-181 [Desulfovibrio piger ATCC 29098]
TGATGCATTTTTGCACCC
>DESPIG_02848 Score=4.4 Pos=-424 [Desulfovibrio piger ATCC 29098]
TGTGCCATTTTTGTAACA
# TF - DVU0151: DESPIG_02989
>DESPIG_02990 Score=4.4 Pos=-170 [Desulfovibrio piger ATCC 29098]
GTTTGCGCAAGCGG
# TF - DVU2894: DESPIG_00321
>DESPIG_02462 Score=5.1 Pos=-402 [Desulfovibrio piger ATCC 29098]
CGTCAGTTATCTGACG
>DESPIG_00321 Score=5.2 Pos=-46 [Desulfovibrio piger ATCC 29098]
TGTCAGTGTATTGACA
# TF - DVU0621: DESPIG_01832
>DESPIG_01831(nrfH) Score=5.8 Pos=-250 [Desulfovibrio piger ATCC 29098]
GTCAGATTTTTCGGAA
>DESPIG_01831(nrfH) Score=5.6 Pos=-229 [Desulfovibrio piger ATCC 29098]
GTCTTTTTTTTCTGAA
# TF - DVUA0100: DESPIG_00681
>DESPIG_01878 Score=4.7 Pos=-475 [Desulfovibrio piger ATCC 29098]
GCCAACATCATTGCA
>DESPIG_00690 Score=4.5 Pos=-119 [Desulfovibrio piger ATCC 29098]
ATCAAAAATGTTGGC
>DESPIG_00695 Score=4.2 Pos=-254 [Desulfovibrio piger ATCC 29098]
GCAAACACCATTGCC
>DESPIG_00689 Score=4.5 Pos=-216 [Desulfovibrio piger ATCC 29098]
GCCAACATTTTTGAT
# TF - ZraR: DESPIG_02784
>DESPIG_02788(zraP) Score=4.2 Pos=-211 [Desulfovibrio piger ATCC 29098]
TGCATAAAAACTGGACA
>DESPIG_02788(zraP) Score=4.7 Pos=-243 [Desulfovibrio piger ATCC 29098]
TGTATAATTTTTGACCA
# TF - CadR-PbrR: DESPIG_01845
>DESPIG_01843(cadA) Score=5.4 Pos=-373 [Desulfovibrio piger ATCC 29098]
ACCCTATAGCGACTATAGGCC
# TF - RpoN: DESPIG_00589
>DESPIG_01518(nudF) Score=3.6 Pos=8 [Desulfovibrio piger ATCC 29098]
TGCGGCCGGCATGCTGCTG
>DESPIG_02393(glcD) Score=4 Pos=-112 [Desulfovibrio piger ATCC 29098]
TTCGGAGCAGGTCTTGCTG
>DESPIG_02787(zraP) Score=4.4 Pos=-128 [Desulfovibrio piger ATCC 29098]
GCTTGCATGTTTTTTGCAA
>DESPIG_02139 Score=5.3 Pos=-147 [Desulfovibrio piger ATCC 29098]
TATGGCACGCTTGTTGCTG
>DESPIG_02849 Score=4.8 Pos=-80 [Desulfovibrio piger ATCC 29098]
AATGGCACAGGCATTGCTA
>DESPIG_00642(amt) Score=5.1 Pos=-127 [Desulfovibrio piger ATCC 29098]
TATGGCACAGGGCTTGCTT
>DESPIG_01879 Score=4.1 Pos=-43 [Desulfovibrio piger ATCC 29098]
CCTGGTCTATCTTTTGCAA
>DESPIG_00689 Score=4.5 Pos=-73 [Desulfovibrio piger ATCC 29098]
TGTGGCATGATTCTGGCAT
>DESPIG_02462(fliM) Score=4.8 Pos=-51 [Desulfovibrio piger ATCC 29098]
TTTGGCCTTGTTCTTGCAT
>DESPIG_00690 Score=5.2 Pos=-54 [Desulfovibrio piger ATCC 29098]
CATGGCACGCTTTATGCTT
>DESPIG_00156 Score=4.6 Pos=-59 [Desulfovibrio piger ATCC 29098]
CATGGTACGTTTTATGCTT
>DESPIG_02269 Score=5.1 Pos=-49 [Desulfovibrio piger ATCC 29098]
AATGGCATGTTTTTTGCTG
>DESPIG_02193 Score=5.3 Pos=-68 [Desulfovibrio piger ATCC 29098]
TCTGGCACGGTTCCTGCTG
>DESPIG_02142 Score=5.1 Pos=-99 [Desulfovibrio piger ATCC 29098]
TTTGGCACAGCCTATGCTT
>DESPIG_02788(zraP) Score=5.1 Pos=-110 [Desulfovibrio piger ATCC 29098]
TTTGGCACGCGGGTTGCTA
>DESPIG_01831(nrfH) Score=5.4 Pos=-119 [Desulfovibrio piger ATCC 29098]
ACTGGCACGCCCCTTGCTC
>DESPIG_02990 Score=5.3 Pos=-105 [Desulfovibrio piger ATCC 29098]
ATTGGCACGGGTGTTGCTT
>DESPIG_02585 Score=5.3 Pos=-57 [Desulfovibrio piger ATCC 29098]
ATTGGCACGGACTTTGCTG
# TF - DVU0110: DESPIG_02519
>DESPIG_02269 Score=5.3 Pos=-164 [Desulfovibrio piger ATCC 29098]
TGTAAAAAAAGCTGACA