# TF - LexA: CLOHIR_00530
>CLOHIR_00530(lexA) Score=4.9 Pos=-165 [Clostridium hiranonis DSM 13275]
ACGAATAAATGTTTGT
>CLOHIR_01234(recA) Score=5.2 Pos=-41 [Clostridium hiranonis DSM 13275]
TAGAACAAATGTTTGA
>CLOHIR_00903(ruvC) Score=4.9 Pos=-79 [Clostridium hiranonis DSM 13275]
TAGTACATATGTTTGA
>CLOHIR_00026(recD) Score=5.1 Pos=-83 [Clostridium hiranonis DSM 13275]
ACGAACTTATGTTTGA
# TF - HrcA: CLOHIR_02043
>CLOHIR_00054(groES) Score=7.5 Pos=-84 [Clostridium hiranonis DSM 13275]
TTAGCACTCATAGTCTTAGAGTGCTAA
>CLOHIR_02043(hrcA) Score=7.4 Pos=-42 [Clostridium hiranonis DSM 13275]
TTAGCACTCTTAAACGATGAGTGCTAA
# RNA - Cobalamin
>CLOHIR_01689(cbiM) Score=101.9 Pos=-403 [Clostridium hiranonis DSM 13275]
GAATATAAATAGTTTTCGGTTTCCGCAAGGAATTAATAAGGAATCAGGTGAAAGACCTGAGCAGCCCCCGTTACTGTGAAGCTGACGAAAGTTAGAATAAAGCCACTGTAATTATAAATTATGGGAAGGTTAATGAGTAGGATGAAGCAAAGCCAGGAGACTTGCCGAAAATATAGAGTAAATTTC
# RNA - FMN
>CLOHIR_00483(ribD) Score=123 Pos=-211 [Clostridium hiranonis DSM 13275]
ACTATCTTCAGGGCAGGGTGAAATTCCCTACCGGTGGTAAAGCCCACGAGCTGCAAAGCATGATTCGGTGTAATTCCGAAGCCGACAGTAAAGTCTGGATGAAAGAAGATGAAAAG
>CLOHIR_01113(ribU) Score=112.6 Pos=-311 [Clostridium hiranonis DSM 13275]
GATGTCTTCAGGGCAGGGTGAGATTCCCGACCGGCGGTATAGTCCGCGAGCGTTTTTTAAAACGCAGGAATTGGCATAAGTTCAATTCAGGATTTGGTGAAATTCCAAAACCGACAGTATAGTCTGGATGAGAGAAGATGTGTTA
# RNA - Glycine
>CLOHIR_00302(COG1748) Score=31.4 Pos=-318 [Clostridium hiranonis DSM 13275]
TGAGGACTGCATTAGAGACTTTTTAAATGAAGCGCCGAAGAAGCAAAACAGAAATTTCATCTTGTTTCTGTGGAAACTGACAGGCAAAAGGAGGGCAGTCTG
>CLOHIR_00302(COG1748) Score=27.5 Pos=-217 [Clostridium hiranonis DSM 13275]
GACGATACTTTGGAGAGAGTGATTTAATTCACCGCCTACGAGGATATAACCAACTGGCAAAAGGACAGAGATATAGATGC
>CLOHIR_00161(grdX) Score=34 Pos=-185 [Clostridium hiranonis DSM 13275]
TGAAGCGTATAGGAGACTTCCTTAAATGGGGACCGAAGGTACAAATGTTTACTATTACCCGATAGTAAATGTGAAATTCTCAGGTGAATATACTATATGGCGG
>CLOHIR_02272(alsT) Score=63.4 Pos=-204 [Clostridium hiranonis DSM 13275]
TTAGGAACTCTGGAGAGTCTCCAAAAAAGGGGCGCCGAAGGTGTACGCAAACTAAGTTTGCAAATCTCTCAGGCAAAAGGACAGAGCAGTAAGGCA
# RNA - L10_leader
>CLOHIR_01568(rplJ) Score=80.9 Pos=-169 [Clostridium hiranonis DSM 13275]
AAAAAAGAATAGATTTGCCGTAGACAGTGGGTGCGTAAGCTTAATTTCCCGCCGAGGTTTTAGATATATTATTTAGAATGTTTAAGCCTCTGCGTCCGTCGATACAGAGGCTTTTTAAATGATACGGT
# RNA - L20_leader
>CLOHIR_01892(infC) Score=35.1 Pos=-246 [Clostridium hiranonis DSM 13275]
ACAGCAAGTAGAAATCCGTTTCTCACCTTACGACGAGAGTTAGTAAGTGTTAATATGAGTTAGAGAAGCTTTAGGTAAAAGCTTTATTAGTAATGAGAACTTATATGGCGGATGATAATTTATCATTCGCCTTTTTTAATATAATG
# RNA - L21_leader
>CLOHIR_01973(rplU) Score=31.3 Pos=-82 [Clostridium hiranonis DSM 13275]
AATAACTGTAATGCCGCTCAGAAAAGGTTGAAAACCCAGTGGGTACCTTTAATGGCGAGTTTGTGACCGAGGAG
# RNA - Lysine
>CLOHIR_00818(asd) Score=88.9 Pos=-393 [Clostridium hiranonis DSM 13275]
TAACCTGCGTAGAGGCGCTGTTTTCATCAGTATTGCGAGCTAGTTGGCAAACTTATCTCGTAAGAAAGGGAAAATAGCCGAAGAATTTATCTGGGCACAGATTTTTTCTGGGGTAGTATAAAATATATACTGCACTGTCACTTGTTTAGTGTTGAGCTACAAGGTTT
>CLOHIR_01388(lysC) Score=81.7 Pos=-300 [Clostridium hiranonis DSM 13275]
ACCAAGGTAGAGGCGCTATTGTTCAATAGTATCTAGAGGAGTTGGCAGACGTTGAATTTAGAGAAAGGGGATATAGCCGAAGATAGAATGTATGGCAATAATTCTTTCTGGGCCTGTATATAACATATGCAGGACTGTCGCTTTAATAAGTGTTGAGCTACAAGGTTACT
>CLOHIR_01339(lysW) Score=94.3 Pos=-275 [Clostridium hiranonis DSM 13275]
TAAATGATAGAGGCGCGGTATTTATCAGTACATAATAACTTAAGCAGGGCAGCTGTTATTATTGAAAGGAAATATCGCCGAAGTTCAGGCTTTGCACCAGGGTCTGTTCTGGGGTATCGTAGAATATGCGATACACTGTCACATCGAGTGGAGCGCTATCTTGGTTAG
# RNA - PreQ1
>CLOHIR_00398(iunH) Score=39.3 Pos=-145 [Clostridium hiranonis DSM 13275]
TGGGGCTTGTTCGAGAACTCCAAGCATAAAAAACTAAGGATCTTA
# RNA - Purine
>CLOHIR_00437(pbuO) Score=68 Pos=-169 [Clostridium hiranonis DSM 13275]
ATAAAAATTAATAATGTAATCATATAATTTTGACAATATGGGTCATAAGTTTCTACCAGCCACCGTAAAAGGGCTGACTATGATACTGAATTAAGTACTCCA
# RNA - PyrR
>CLOHIR_02208(pyrF) Score=47.3 Pos=-106 [Clostridium hiranonis DSM 13275]
AGTCTTTTAAGCTAGTCCAGAGAGACTGGGAAAGATATCTCATAGCGTTTTTTTGTTATGGAAAGATAAAATCCTTATGCCTCTTTTTGTGGTGTAAGGATTTTTTGTGTA
>CLOHIR_00048(pyrB) Score=25.2 Pos=-47 [Clostridium hiranonis DSM 13275]
ATAGCTTTAAATTCGGTTCAGTGAGGCCGAGAAGGAGGAATTAAAAAATGTTAAAATCAAGAAATCTAATACAGCCAGAAGACTTTACTGTTGAAGAAATAGATGAGGTTCTATCTCTTG
# RNA - SAM
>CLOHIR_02203(rhc) Score=20.7 Pos=-167 [Clostridium hiranonis DSM 13275]
ACTTATCAAGAATCGGGGCAGAGGGTCAGCTCGTATCCCGATACCAACCTAAATTTAAAGGTGGTCCTGCTGACATCGATAAGATAG
>CLOHIR_00307(metN) Score=87.5 Pos=-203 [Clostridium hiranonis DSM 13275]
TCTTATCAAGAGAGGTGGAGGGACTGGCCCTGTGAAACCCGGCAACCGGTATATTTCAATATATACAGCGGTGCTAAATCCTGCAACTAGTAATAATCAGTTGATAGATGAGTATA
>CLOHIR_00024(metK) Score=96.8 Pos=-292 [Clostridium hiranonis DSM 13275]
CCTTATCAAGAGAGGCTGAGGGACAGGCCCGATGAAGCCCGGCAACCACCCATAAGGGAAAAGGTGCTAATTCCTACAGGATTTATCCTGAAAGATGAGGTTA
# RNA - T-box(Ala)
>CLOHIR_01199(alaS) Score=113.9 Pos=-192 [Clostridium hiranonis DSM 13275]
CAAATGCAAAGAAAAGAAGGAGTAAATCTACTGATTTTGCACAGAGAGAGGGAATAGCTGAGACCCCTTGGAATAGGCAGATTGAAGCAGTCTTGGAGCATAAATCTTGAACGTATTTTACTATTAGAGATTTACGGTAGCGACGTTATAGCTAAGGATTACCGGAGAAGCAGATTTTATCTGTAAATTAGGGTGGTACCGCGAATAATACTCGCCCCTATGTT
# RNA - T-box(Arg)
>CLOHIR_01256(argG) Score=105.3 Pos=-416 [Clostridium hiranonis DSM 13275]
AGTAATCGTTGAAAAAGAAAGTAGCTCAGAATGATTTTATAGAGAGCAGGGGATGGTGGAAGCCTTGCATTGATATCTGAAGTGAAGAGAGCTTTGGAGATTGTTGTGAAAGTCTTAAAGATATAAGCAACAGGTAATCCTGCCTTAAAGGAAAGAGTGGATAGTATTAACTATCAATTAGAGTGGTAACGCGGATTATATTTCGTCTCTTGGTT
>CLOHIR_01842(artP) Score=120.7 Pos=-477 [Clostridium hiranonis DSM 13275]
TAAATCCAGTGACAAAGAGAGTAGCCTATAATGGATTTCCAGCGAGTCGGAGTTTGGTGTGAGTCCGATAATGAAGTATAGAGTGAAGAGAACTTTTGAGGAGAATTCCAGAAATAATAGTATGGAATTAGGTCGCCCGCCTTAAGGGTTTGAGAGGGTAGGTAGAAATACTTATCAATAAGAGTGGTAACGCGGTTAATTCGTCTCTTAGTC
# RNA - T-box(Asn)
>CLOHIR_00190(asnS) Score=124.3 Pos=-202 [Clostridium hiranonis DSM 13275]
TAAATGCAGTGAAAAGAAGAGTAGGTATTTTCTAATAGTTACAGAGAGTCGGCGTTGCTGAGAGTCCGATTGCTAATTGTCTATACTGAAGAACATCTTGGAGCAGCTGACCGAAAGCATTTGTTAGTAGGCTCAGACGGTAGGAACCGTTATATTCCATAAGCAAAAGCTTTATGAGTGGCTGAGATTATCAGCAATCAGGGTGGTACCGCGAATTGATTATTATACCTTTCGTCCCTATTAT
# RNA - T-box(His)
>CLOHIR_00267(hisX) Score=121.2 Pos=-406 [Clostridium hiranonis DSM 13275]
ATAAAGCGAAGAAGAGAAATAGTAGATAGTAAAGTCTTTTCAGAGAGATTTCGGTTGGTGTGAGAAATCAAGAACTAATTATCGAACACATCTCAGAGCATAGCACCGAGAAAGAAAGTTCATGTAGGCTGCTACGGTAGTACCCGTTATCGTACAAGGGTATCGTCTTTTAATAAGACTGTACTCTATGAGGCTAGTATCGTGAGGTACTAGTGAAGAGAGGTGGAACCACGGAATTAATACTCCCGTCCTCTAGCT
# RNA - T-box(Ile)
>CLOHIR_01069(ileS) Score=111.7 Pos=-355 [Clostridium hiranonis DSM 13275]
TAAAGGCTATGATGAAGACAGTAGATTCAGGATTTTATTTTTACAGAGAACTGGGTTAGCTGAGAACCAGCAAAATATACTGAATTGAATATCACTTCGGAGCTGAAGGCTGAAAGATTTATCCTATTTGGATTTATCAAATAAGTTATTCCGGTAATGTGCCGTTATACAGTAGAGTGTCGTATAGATAAATTTAAAAAAATATCTATGCGGAATTAGGGTGGTAACGCGAGCAACTCGTCCCTTTGTG
# RNA - T-box(Leu)
>CLOHIR_01984(leuS) Score=92.6 Pos=-285 [Clostridium hiranonis DSM 13275]
AGACAGTCTGAAGTAGTAGAATAGGAGTTATTTCAGAGAGCTGGTGTTAGCTGCGAACCAGTATAACAAATTTTTGAACTTGTCAGATACAAACTGTCAACCGTTGTTGGTTTAAAGACTCAACTAAGAGAGTTCAATTTATTTGAGCTAATTAGGGTGGTACCGCGAGTATATAATATCCTCGTCCCTAAACA
# RNA - T-box(Met)
>CLOHIR_01636(metS) Score=111.1 Pos=-288 [Clostridium hiranonis DSM 13275]
TAAAAGCGATGAAGAGAAGAGTAAGAATAGAGTAATTCTACAGAGAGCCAGAGAAGGTGAAAGCTGGTGTTTTGACGATATTCTGAATATGGACTTGGAGCTTTTTGGTCGAGCATAGATGTAAGACCTAAACGTTTAGACACGTTATAGTCTACTTGAGATATCCACTATTTGTATATATTGTGGATAAATTAGGGTGGTACCGCGAATACAATCGCCCCTATGAG
# RNA - T-box(Phe)
>CLOHIR_01898(pheS) Score=113.8 Pos=-318 [Clostridium hiranonis DSM 13275]
AATTAATGTTGATAGAGAAAAGTACTGTGAACCATTTCAGTAAAGAGATAGATTGTCGTTGGCTGTGAGCAATCTTCTGAGATATCATAGGAAGTTCGCTCTGGAGTTTCTAAGCTGAAATCTTACGATGTGTAGGTTTGGACGTATAAGATGCGTTAAATCTTTTGAGGTGGTCTAATTAAAGTTTATTAGGCTACTAGGGTGGTACCGCGGAATTATAGTCTTTCGTCCCTAGCTG
# RNA - T-box(Pro)
>CLOHIR_01549(proS2) Score=119.9 Pos=-290 [Clostridium hiranonis DSM 13275]
TGATTGCAATGATAAAGAAGTAGTAGGTAGTGAAAGTCTTACAGAGAGGAAATGTTGATGAGAAATTTCTAGATGGAAGCAACTGAACCAATCTTTTAGCTTAGAGGGGTAGCAACCTCTACGGATGGAGCCGTTATACTCCAGCAAGAGAATCACATGTTTTGTGATTAACTAGAGTGGTACCGCGGAAACTATGCCTTTCGTCTCTATTAA
# RNA - T-box(Ser)
>CLOHIR_02081(serS) Score=134.3 Pos=-343 [Clostridium hiranonis DSM 13275]
TGAAAAGGCAATGAAGGAGCTAAGTAAAAAACAGTTCTGTTTACAGAGAGTGAGTGGTCGGTGTGAACTCATATCAGTGGTTTTTGAATCTACTCTGGAGCTTCTAATCTGAAATAAGTTAGACGTATTCCTACGTTACAGGATTTTGAGAGGAATGTGCATTTATAGGTGCATTCAATTAGGGTGGCAACGCGGATAACAGATTTTCGTCCCTTTT
# RNA - T-box(Thr)
>CLOHIR_01888(thrZ) Score=106.8 Pos=-308 [Clostridium hiranonis DSM 13275]
TATTAGCGATGAAAAGACAGAGTAGGATAAAGATCGTCTTACAGAGATTTTGGGTCACCGGCTGAGAGCCCAATAGAAATGAGTTATCTGAAAACTAGCTTGGAGCAGGATTTAGTAGCGAAAGTGAAAGTATCCGGGTGATTACCTTATAATCTTCAAGAGGATGTTTTATACATCAACTTGGGTGGAACCGCGAGCACACTCGTCCCAATTTT
# RNA - T-box(Trp)
>CLOHIR_01115(mtnN) Score=101.4 Pos=-262 [Clostridium hiranonis DSM 13275]
TAAATCCTAAGACTGGAGAGAGTAGTCGGGTTGAGTTTGATACAGAGAGTTGCAAGTAGCTGAGATTGCAGCATAAATAAATTCGGTGAATGGGTCCACGAGGAGATAGGTGAATTATAGTAGCCGAACCGTCACTGCACGTTACGCAGAAGAGAGATACACGATAAGTGTATAATTTAGGTGGTACCGCGGTAATATCGTCCTAGTGTT
>CLOHIR_00214(trpP) Score=103.8 Pos=-381 [Clostridium hiranonis DSM 13275]
AGTAAATTCTTTGACGAGGAAGAGTAACTGTTTTTAGGTTCAATACAGAGAGTTGACGTTGGTGAGAGTCAGCAAGAAGGAAAATAGTGAATGGGCCTTAGAGAACCGGATTGAAATATTTTTAAAGTAGACTCCGGCGTTTGGTGTACGTTACAACACACAGAATATGTTAGTATTCTTACAGAGATGTATTTCTTGTATAATTTTACAAGATATACGAATTTAGGTGGCAACGCGAATTAATACTTCGTCCTATAT
# RNA - T-box(Tyr)
>CLOHIR_01268(tyrZ) Score=107.7 Pos=-206 [Clostridium hiranonis DSM 13275]
CAAAGGCTGAGAAGAAAAGAGTAGGATTTATGGGATTTTCAGAGAGCTCCAGGTTGGTGTGATGGAGTAATTTTGTATATCTGAAGTACATTTTGGAGCCGCTTTCCTGAAATAATAGTAGGGTTTGACGATTTGCATACGTTATAATGCAGTGTCTAGTATTTTGACACACTGAGTCGGATATCGTGAGGTATTCGAGAACTAAGGTGGTAACACGAGAGATATCTCCCGTCCTTTTTAT
# RNA - T-box(Val)
>CLOHIR_00746(valS) Score=123.6 Pos=-377 [Clostridium hiranonis DSM 13275]
TACAGACGTTGAAGAAGAGGAGTATTCAGTGACTTCCATCAGAGAGAGAAATCCATTGGCTGAGAGGTTTTTTAGGAGTAAGAGCTGGAGAAGGTAGCTTCGGAGTTTCCAAGCTGAGTTTAGTAGGTTTGGACGGGTGGAACCGTTATATTCTGTAGAGAGTCGAGGAATTTTTCCTCGGAATTAAGGTGGTAACGCGAGCTTTTCGTCCTTATGTA
# RNA - glmS
>CLOHIR_00014(glmS) Score=97.3 Pos=-218 [Clostridium hiranonis DSM 13275]
TTCTGTTTTTAGCGCCAGAACTTGTAAATTTAATATAAATTCAAGTTGACGAGGTCAGAGTTAATCGAATATTCGGCGGGTGCTCTGCGGTGTATTTACCATCGTAAAATTTCTTCAAAACTTAGAAGTGATTCTTTGAACAAAGGGAAATTTGAGTAAATAATT
# RNA - TPP
>CLOHIR_00425(thiC) Score=57.5 Pos=-275 [Clostridium hiranonis DSM 13275]
ATCGATGCTAGGGGCGCTGAAATAAGGTCAGCTGAGAGAGAAAGCCAAAAACTTACAAACCCTAAACACCTGATCAAGATAATGCTTGCGAAGGGAAGCTGGTAGAAAATTTTCA
>CLOHIR_00634(thiM) Score=56 Pos=-175 [Clostridium hiranonis DSM 13275]
AAAATCAAGCAGGGGAGCTTTTTCGGCTGAGAGTAGGTAAAACCTAGACCCTTAACCTGATTTGGATAATGCCAACGTAGGGAGAAGATAAGATATCAA
# TF - Rex: CLOHIR_00042
>CLOHIR_00687(adhE) Score=5.3 Pos=-209 [Clostridium hiranonis DSM 13275]
ATGATAAAAAAATATCAA
>CLOHIR_00139(phf1) Score=4.8 Pos=-107 [Clostridium hiranonis DSM 13275]
ATGTTAAAAATATAAAGA
>CLOHIR_00139(phf1) Score=5.1 Pos=-87 [Clostridium hiranonis DSM 13275]
TTGATAAAAAAATGACAA
>CLOHIR_00157(nadA) Score=5.5 Pos=-210 [Clostridium hiranonis DSM 13275]
ATGATAAAAAAATAACAA
>CLOHIR_00157(nadA) Score=5.4 Pos=-38 [Clostridium hiranonis DSM 13275]
TAGATAAAAAAATAACAA
>CLOHIR_00042(rex) Score=4.3 Pos=-55 [Clostridium hiranonis DSM 13275]
ATGTTATATAATAAACCA
>CLOHIR_00042(rex) Score=4 Pos=-101 [Clostridium hiranonis DSM 13275]
TTGATATAATATATTCAA
# RNA - yybP-ykoY
>CLOHIR_01890(COG1971) Score=35.8 Pos=-196 [Clostridium hiranonis DSM 13275]
ATTTTTAGCAATAAGGGAGTAGTTGGCAATCTTTTAAGATTGTAATTTAGTCAACATACTGGCAGTTTGACTGTCTGGCTTTATTTTGAATGACGAGACTTATCTGCAGCT
>CLOHIR_02014(atcL) Score=56.3 Pos=-218 [Clostridium hiranonis DSM 13275]
TACTTCTCGAAGGGGAGTAGCTTACACAGATAAGTGCAGTTGGTCGTCAATACAGCATATACGCTCGGTCAACTGGCGAGGATAGAATGTTAACCTTGATAGCGAGACCTTCAAAATAGACAA
# TF - CcpA: CLOHIR_01937
>CLOHIR_01952(rnfC) Score=3.6 Pos=-190 [Clostridium hiranonis DSM 13275]
TAGAAACATATATCTT
>CLOHIR_01036(CD2693) Score=4 Pos=18 [Clostridium hiranonis DSM 13275]
AAGAAAAAAATTGGCT
>CLOHIR_02123(CD3664) Score=4.3 Pos=-31 [Clostridium hiranonis DSM 13275]
AAATAAACATTTTCAT
>CLOHIR_00161(grdX) Score=4.2 Pos=47 [Clostridium hiranonis DSM 13275]
AAAAGAAAGTTTTCCT
>CLOHIR_00196(nanA) Score=4.3 Pos=-77 [Clostridium hiranonis DSM 13275]
AGGAAAACGTTAATTA
>CLOHIR_00161(grdX) Score=4.3 Pos=116 [Clostridium hiranonis DSM 13275]
TAGAAAATATATTCAT
>CLOHIR_00162(trxB3) Score=4.3 Pos=-97 [Clostridium hiranonis DSM 13275]
CGGAAAACATTTACAA
>CLOHIR_00836(cggR) Score=4.4 Pos=-163 [Clostridium hiranonis DSM 13275]
GATATATCGTTTTCTT
>CLOHIR_01291(aspB) Score=4.9 Pos=232 [Clostridium hiranonis DSM 13275]
AGGAAAACGATTTCGT
>CLOHIR_00174(gatA) Score=4.7 Pos=-153 [Clostridium hiranonis DSM 13275]
AAAAAAACATTTTCCT
>CLOHIR_01724(fba) Score=4.8 Pos=-112 [Clostridium hiranonis DSM 13275]
AAGAAAATGTTTGCAA
>CLOHIR_01209(pgi) Score=4.9 Pos=-159 [Clostridium hiranonis DSM 13275]
GAAAAAACGATTTCTT
>CLOHIR_01209(pgi) Score=4.1 Pos=-11 [Clostridium hiranonis DSM 13275]
AGAAAAATATTATGAT
>CLOHIR_00956(CD2791) Score=4.3 Pos=-141 [Clostridium hiranonis DSM 13275]
GAGAATAAGTTATCAA
>CLOHIR_00712(sigF) Score=4 Pos=-218 [Clostridium hiranonis DSM 13275]
AATAAAAAGTTATTCT
# TF - CD1503: CLOHIR_01288
>CLOHIR_01288(CD1503) Score=6.3 Pos=-68 [Clostridium hiranonis DSM 13275]
AGGAGTTAGTTACTTGACTAACTAACCAAT
# TF - CD0652: CLOHIR_00432
>CLOHIR_00432(CD0652) Score=6.5 Pos=-104 [Clostridium hiranonis DSM 13275]
TGTATATAGTGTATATACAGTTGACAGAATTTATATACA
>CLOHIR_00432(CD0652) Score=6.6 Pos=-115 [Clostridium hiranonis DSM 13275]
TTAAAAAATTGTGTATATAGTGTATATACAGTTGACAGA
>CLOHIR_00432(CD0652) Score=7 Pos=-63 [Clostridium hiranonis DSM 13275]
GTTATTATGTGTATATAGATAATATATACAGTATATACA
# RNA - FMN
>CLOHIR_00483(ribD) Score=123 Pos=-211 [Clostridium hiranonis DSM 13275]
ACTATCTTCAGGGCAGGGTGAAATTCCCTACCGGTGGTAAAGCCCACGAGCTGCAAAGCATGATTCGGTGTAATTCCGAAGCCGACAGTAAAGTCTGGATGAAAGAAGATGAAAAG
>CLOHIR_01113(ribU) Score=112.6 Pos=-311 [Clostridium hiranonis DSM 13275]
GATGTCTTCAGGGCAGGGTGAGATTCCCGACCGGCGGTATAGTCCGCGAGCGTTTTTTAAAACGCAGGAATTGGCATAAGTTCAATTCAGGATTTGGTGAAATTCCAAAACCGACAGTATAGTCTGGATGAGAGAAGATGTGTTA
# TF - BirA: CLOHIR_01622
>CLOHIR_02034(bioY2) Score=8.3 Pos=-152 [Clostridium hiranonis DSM 13275]
AGGTAAAC----------------GTTGACAT
# TF - IscR: CLOHIR_01195
>CLOHIR_01195(iscR) Score=6 Pos=-43 [Clostridium hiranonis DSM 13275]
TTAAACCATAGTAAAACAGTAGGAATTAA
>CLOHIR_01195(iscR) Score=5.7 Pos=-77 [Clostridium hiranonis DSM 13275]
TAATACTTGACAAAAATAGTCGGATATAA
>CLOHIR_01195(iscR) Score=5.9 Pos=-103 [Clostridium hiranonis DSM 13275]
ACAAATCATACTAAAATAGTAGGAAATAA
# TF - YhcF: CLOHIR_00206, CLOHIR_00582
>CLOHIR_00582(yhcF2) Score=4.8 Pos=-94 [Clostridium hiranonis DSM 13275]
TGTGTACTACACAGATAATACGCT
>CLOHIR_00582(yhcF2) Score=5.3 Pos=-242 [Clostridium hiranonis DSM 13275]
GGTGTACTACCATTATAATACAGT
>CLOHIR_00601(vanZ) Score=6.1 Pos=-78 [Clostridium hiranonis DSM 13275]
AGTGTACTAGTTGTATAATACACT
>CLOHIR_00582(yhcF2) Score=5.6 Pos=-40 [Clostridium hiranonis DSM 13275]
AGTGTACCACATAAATAGTACACC
>CLOHIR_00206(yhcF) Score=6.4 Pos=-44 [Clostridium hiranonis DSM 13275]
ATTGTATTAACAACTTAATACAAT
# TF - NagR: CLOHIR_01904
>CLOHIR_01904(nagR) Score=5.9 Pos=-36 [Clostridium hiranonis DSM 13275]
TAATTGGTATAGACCAAAAT
# TF - Fur: CLOHIR_01204
>CLOHIR_00610(PF10087) Score=5.5 Pos=-71 [Clostridium hiranonis DSM 13275]
CATAATAATGATTATCAAA
>CLOHIR_01757(zupT) Score=5.3 Pos=-53 [Clostridium hiranonis DSM 13275]
ATTAATATTCACTTTCATT
>CLOHIR_00731(feoA) Score=6.1 Pos=-39 [Clostridium hiranonis DSM 13275]
ATTGATAATGAATTTCATT
# TF - NrdR: CLOHIR_01054
>CLOHIR_00659(nrdD) Score=5.6 Pos=-64 [Clostridium hiranonis DSM 13275]
ACACTATATATAGTGG
>CLOHIR_00659(nrdD) Score=5.3 Pos=-33 [Clostridium hiranonis DSM 13275]
ATACTATATATAGTTG