# TF - HisR: CLOBOL_07128
>CLOBOL_07128(hisR) Score=5.5 Pos=-113 [Clostridium bolteae ATCC BAA-613]
GACTTTAATATGCTAAAATG
>CLOBOL_01668(hisX) Score=5.3 Pos=-25 [Clostridium bolteae ATCC BAA-613]
CGCTTTAGTGTGCTAATATG
>CLOBOL_03939(hisZ) Score=4.8 Pos=-63 [Clostridium bolteae ATCC BAA-613]
CACTTTACCATAGAAAAGCA
# TF - NiaR: CLOBOL_03917
>CLOBOL_03914(nadA) Score=5.1 Pos=-108 [Clostridium bolteae ATCC BAA-613]
CCTATATGTCTTGTCACATGTA
# RNA - Cobalamin
>CLOBOL_07302(nikA) Score=104.9 Pos=-325 [Clostridium bolteae ATCC BAA-613]
CGAACATAACCGTATCAGGTCACCTTTGGGTTTAACAGCTGCAAAGGGTGAAAAGGGAATCAGGTGAAAATCCTGAGCGAACCGGTCACTGTAAATGTGGAGAAACCTCCGGACAGACCATTGCATATATTTGCGAGAAGGTGGGGGGATTGAAGATGCATAAGCCAGGAGACCTGCCTGATAGGAAAAACGGCGGCG
# RNA - FMN
>CLOBOL_02256(ribU) Score=114.4 Pos=-352 [Clostridium bolteae ATCC BAA-613]
TAAAGTTCTTCGGGGCAGGGTGTGATTCCCTACCGGCGGTAATAGTCCGCGACCCGCTACGGCGGCTGATCTGGTGTGATTCCAGAACCGACAGTATAGTCTGGATGAGAGAAGAAGGTG
# RNA - GEMM_RNA_motif
>CLOBOL_00225 Score=53.7 Pos=-394 [Clostridium bolteae ATCC BAA-613]
AAAAAATAATTAGCAAAACTGGTGAAAGCTAGTGACGCAAAGCTACAGGGATTTCTCTCTAAAAAGAGGTGTCAGCCAGCTGCATGA
>CLOBOL_04793(NT01CX_2393) Score=34.5 Pos=-376 [Clostridium bolteae ATCC BAA-613]
TATATTCAGGTAGCAAAGTAGTTGAAAGTCTATGACGCAAAGCTAAAAGGCCTGTGAAATGGTAGCCAGTTGCACGT
>CLOBOL_00226 Score=53.7 Pos=-182 [Clostridium bolteae ATCC BAA-613]
AAAAAATAATTAGCAAAACTGGTGAAAGCTAGTGACGCAAAGCTACAGGGATTTCTCTCTAAAAAGAGGTGTCAGCCAGCTGCATGA
>CLOBOL_00697 Score=50.3 Pos=-138 [Clostridium bolteae ATCC BAA-613]
GTAAATATTGGGGCAAAGCACGTGAAAACGTGTGACGCAAAACTAGAGGGCCTGTAAGATGGCAGCCAGTTGCATTT
# RNA - Glycine
>CLOBOL_01537(gcvT) Score=39.8 Pos=-125 [Clostridium bolteae ATCC BAA-613]
CGGACGATACTCTGGAGAGCATAGCACCGAAGAAGCCAAATCTTTCAGGTCCAAGGACAGAGCGCATGAA
>CLOBOL_01537(gcvT) Score=39.7 Pos=-265 [Clostridium bolteae ATCC BAA-613]
GAAGATGGATTCGGGAGAGACTGACCAAAATGTATGAAAGATACAGAATACGCTTGATATAGCGTATCCGTGTATTATCAGCATACAGAACACAGCGCCGAAGGGGAAGCGGAAAACTCTCAGGCAAAAGGACCGGATACC
>CLOBOL_05294(glyA2) Score=47.8 Pos=-349 [Clostridium bolteae ATCC BAA-613]
TGATGGATTCGGGAGAGACTGCACAGGCAGCGCCGAAGGGGAAGCGAAGAACTCTCAGGCAAAAGAACCGGATACTGG
>CLOBOL_05294(glyA2) Score=34 Pos=-272 [Clostridium bolteae ATCC BAA-613]
GACGAAACTCTGGAAAGCGATAGCACCGACGAAGCCAAATCTTTCAGGTACAAAGACAGAGCGCATGAACA
>CLOBOL_00277(pfoR) Score=49.2 Pos=-386 [Clostridium bolteae ATCC BAA-613]
CGGACGGGACTCTGGAGAAGGTCACTAAAATGTGAATACCGATGAAGCAACCGGCGGCATAGCAGCAACCGCGTCAGGGAAACTTTCAGGTAAAAGGACAGAGGCAGACAT
>CLOBOL_00277(pfoR) Score=49.8 Pos=-463 [Clostridium bolteae ATCC BAA-613]
GTTGATGAATTCGGGAGAGATTACCGCCAGGTAACGCCGAAGGGGATGCGCAAACTCTCAGGCAAAAGAATCGAATTC
# RNA - L10_leader
>CLOBOL_06829(rplJ) Score=66.2 Pos=-334 [Clostridium bolteae ATCC BAA-613]
ATACCACAGTATTGAATGCCCTGAGACAGCAGGTACCGTAAGGTGTAAGGCGAAAACGCCTGCCGAGGAACATACAAAACTCTGATTATTTATGATGAGATTTTGCGAACCTCTCTGTCTTTACGGCGGAGAGGTTTTTTGTCCGGTCT
# RNA - L20_leader
>CLOBOL_05438(infC) Score=16 Pos=-240 [Clostridium bolteae ATCC BAA-613]
GACAGGAAAGCAGGTATCCGCCTCACCCTGGCACGAACATGTGACCCGGGTTCATAGATGAAACGATGTGCTGTATTATTTCA
# RNA - Lysine
>CLOBOL_04168(dapA) Score=98 Pos=-328 [Clostridium bolteae ATCC BAA-613]
ATCATAGAGTAGAGGTTGCGTTGATCATGAGTAGATAAGCCGGATGTGGCAGGCACAGGTGATGGCTTAGGGAAAGGGAGAAACGCCGAAGAGGAAGCGTTCCGTGTTCACGCCCCCTCTGGGCATATGGTTAAGAGCCGTATGACTGTCATCCGGGTGGATGGAGAGCTACCAAAGAA
>CLOBOL_04690(alsT) Score=79.9 Pos=-338 [Clostridium bolteae ATCC BAA-613]
AGGATGCGATAGAGGCGCAGTAAGCATTAGTATCTGTGTGATAATGGATGCCATCCCCAGGGTGGCGGACAGAGGGGATTTTGTCCCGGAGGCCGGCGGGCCGGAGCACACAGGGAAAGGGATTACTGCCGAAACGGATTCTGTCTGCCGGCGGAATGTGTTGGGATGCAGTCTAACAGGCTGCGTACTCTCACTTTTTAAAGTGGTGGCGCTATTGGCTGG
# RNA - PreQ1
>CLOBOL_02330(queT) Score=19.8 Pos=-57 [Clostridium bolteae ATCC BAA-613]
GACCGGTGTGTTCGAGACCTTCCACACCTAAAACAAAACTAAAGGAGA
# RNA - Purine
>CLOBOL_03369(guaD) Score=57.4 Pos=-253 [Clostridium bolteae ATCC BAA-613]
AGAAGTATAAGTATTCAAAACTTATATATGCTCAAGATAGGTTGAGCGTTTCTACCAACTACCGTAATAGTTGACTATAAGTTTTCACATCAGGTAC
>CLOBOL_04589(COG2509) Score=46.5 Pos=-153 [Clostridium bolteae ATCC BAA-613]
ACTATAACCGTTGTGATGCCTGTATAAGTTCATGATTGGATGAACGTTTCTACCAGCTACCGGAATAGTTGACTACATGCTTCTATTTTGTATACTG
# RNA - S15
>CLOBOL_05362(rpsO) Score=20.5 Pos=-62 [Clostridium bolteae ATCC BAA-613]
CTGGTGACTCCAGCCGGCAGCCTGGTTTTTGGTGAGATGAATAATATTAAGGAGGAAACACCATGATTTCAAAGGAAAAGAAAGCACAGATTATCGCAGAGTATGGCCGTAAGCCAGG
# RNA - SAM
>CLOBOL_06841(metK) Score=46 Pos=-215 [Clostridium bolteae ATCC BAA-613]
TCCCTTATTCAGAGTGATGGAGGTACAAAGGACCTGTGAAGTCACGGCAACCCCGGTTGAGTATATCAGCAAGATATGCGAAAGGGCCGGAAGGTGCCAGCCTGAGCGAGGAGTATGCTATGGAGCATACTTGGTCGAGCAATAAGAG
# RNA - T-box(Asn)
>CLOBOL_01137(aspS2) Score=56 Pos=-419 [Clostridium bolteae ATCC BAA-613]
CAACAGCAATGAAAGAGACTCTGGCCTGAGAAATGTGACAGGAAGGGGGCGTCACCGACTGAGAGCGCCGCCGGGCAGGACTGGGCTAAGGGAACACTCTGGAGCTGGTATATCGAAGCGGCCAGGACACGGCTGATAGTAGGTATATCCGTTGTACACGTTACGTACATAGAGAGGGGAGCTGGAAGCGCAGGGCAGTCTGCTGCGGGACCAGGTCTCAATGCGGGTGGTACCGCGGGAAATGTCTGAATTGAATCCCGTCCCGGAATG
# RNA - T-box(Ile)
>CLOBOL_06015(ileS) Score=64.8 Pos=-303 [Clostridium bolteae ATCC BAA-613]
GAAAAAGGCATAGATGGAGACAGTAGGCCTGCAGGAACGCCTCAGAGAGCCGGAGATGGTGGAAACCGGTGCAAGTAATGCAGAACTGAAGATCACTCCGGAGCTGTCCGGCTGAAGGGATGCGTCAGCAGCGCATGATAGGCCGGGACGCGTTTCCCGCGTTAAGGGAACTCATATGATGGTATGCAGTAATAGGTGGTTAAACGAAGCGGTTTATGGCTTTCGTCCTGTTC
# RNA - T-box(Leu)
>CLOBOL_01934(leuS) Score=98.1 Pos=-364 [Clostridium bolteae ATCC BAA-613]
TGCAAATACGCAGATAGGGAAGAGTAGATAACCGGATGGATGCAGAGAGCCGGCGGCTGGTGAAAGCCGGTGACGGATGGTTGTTGAACTGGCCCTGGAGTAGCCTGTCCCAACGAGGAAGGGCCGCCGGAAACGGGGGACCGGGAACCAGTAGGTCAGGACGGAGACCTTACCGTTATAAGAGGATTAAGTGCATGCGTCAGACAGCATGAACCAGAGTGGTACCGCGCGGGGATTTTTAAGCCTTGCGTCTCTAGC
# RNA - T-box(Phe)
>CLOBOL_02009(pheS) Score=90.4 Pos=-276 [Clostridium bolteae ATCC BAA-613]
ATCAAAAGCGATGAAGGTGCATAGTAGACGTTTATTTTCCATCAGAGAGGGGAGGCCACCGGCTGAAAGCCTGCCCGGGTTCAGATAGACGGTTGAAATTCCCACCGGAGCTGTACGGGCAAAAGGATGCTTTCGCCAATCCGTGAAAGGATTCCGGTAGTCTGTGACGCAGGCACACGTTACGTGCATCAAGTGTCTGTATACTCCAGTTATAGGTTCTGGGGTGATACAGGAAGCAGGGTGGTACCGCGAGTTTACAGTCTCGTCCCTTCA
# RNA - T-box(Pro)
>CLOBOL_06453(proS2) Score=95.7 Pos=-309 [Clostridium bolteae ATCC BAA-613]
AGATATGACATGGAAAGGGAACAGTAAGCGTGATTGCACGTCACAGAGAGAGGGCCGCAGGTGAGAGGTCCTTACGGTTGGCAGATGCTGAACCCACCCTGGAGTCCTGTATGATGAATGCAGCGTATGTCCGGCGTTAACGGATGATGAGAGAACCATAAGGGCGGCTTAAGCCCGAAGGTTAATAAGGGTGGTACCGCCGAGTCATTCGGTCCCTTGT
# RNA - T-box(Thr)
>CLOBOL_01887(thrZ) Score=60.9 Pos=-234 [Clostridium bolteae ATCC BAA-613]
AGCAAAGGCATTGAGGGAAGCAGTAGTCAGTGGGAAGTATCCAGAGAGCAGGCCGGTTGGTGGAATGGCCGCATACCAAAGATTGACGAATACCAGTCCTGAGCCGCGTCAGGGATGTCCGGACATGTGTTACAGCATAAAGAAGGATGGGAAATGGCGCCGTACCCCGCGTTAAGGGATAAATGAGTGAAAATCAAGGTGGAACCGTGTGAATGCACCCTTGGA
# RNA - T-box(Trp)
>CLOBOL_01967(trpX) Score=107.9 Pos=-370 [Clostridium bolteae ATCC BAA-613]
TTAAACCGTAGAGAAAGAGGAGTAAGCTATCAAAGCTTTAACACAGAGAGCCGCAGGCGGTGGGATTGCGGTATGGGGCTGGCAGCTGAATGGACTTTTGAGGGCGGTCTTGAAGGATTGTTTTATCTGTAGGGACCGACGGATTCCGCAACCGTTATACATGTGGCGCATATGTTGGTATGTGTAAAGTGGACTTTTTAGTCAATTTGAGTGGCACCGCGGATTTCATTCGTCTCAATCGT
>CLOBOL_04492(trpE) Score=68.9 Pos=-486 [Clostridium bolteae ATCC BAA-613]
TAAAAAACTGTTGAGCAGGAGTAAGTAAGATTGTAATTCCAGGCGCAGAGAGCTTCCGGCCGGTGTAAGGGAGCATTGGATTAGAGTCTGAATGGACCTGCGAGGGCAGCTGGAAACCAGGGTCATAGAGATATGTCTGATGGGAGTATGGGCTGACGGGTATCCCACCGTTACCAGGGAGAACGCATGATGGTGCGTTGCAGAGCGGGCGTATTTTATTTCTTTGTTCGATGACACAGCATCAGGTTAATTTTAACTTGATGCTTTTTTAATTCCCAGACCGGAGAATGGCGGGGAGAGTGCAGGACATGGAAAGCGCCAACCAGGGTGGTACCGCAGAAGCCGGAAGAAGCTTTTGTCCCTGCT
# RNA - T-box(Tyr)
>CLOBOL_06297(tyrS) Score=117.8 Pos=-284 [Clostridium bolteae ATCC BAA-613]
AAAGAATGCCATGAAGGAGAACAGTAGTACAGAGGCTTTTCTTACAGAGAGCGCCCGGTTGGTGGAAGGACGCAGGAAAGACTGTATGAATACGCTCCGGAGCAGCAGCCTGAAGGTTTTAGTAGGGTTTGACGGGAACGCCCGATACAGCGTGAGAGTGTTGACAGACACTCGATGAGGAATGTTCTGTGAAGGACATTCAAGTACAGAGGTGGTACCGCATAACCTGCCCTCTGC
>CLOBOL_03268(tyrS) Score=70.2 Pos=-448 [Clostridium bolteae ATCC BAA-613]
TGAATTGGCTATGACGGGAACAAGTAGTAGCCTGCAGGAACAGACAGAAAGCAGCCGGATGATGAGAGGCGCATGGAAAGCAGGTCATGAATACATCCCTGAGCTTCGCACCCAACAGCGCTGCTTCATATAACAGCCTTAGTAGGCTGCGACGGGTCCTGCATCCGTTATCGTGCTAGAGTATACGGGCGTTTGGCCAGAGCCTGGCGCCAGTACTCGAAGAGGCAGGCAGCGTGAGCTGTCTGTGAACATCAGGTGGTAACACGGGGCTTACGGGCTTCGTCCTTTTG
# RNA - glmS
>CLOBOL_03730(glmS) Score=53.3 Pos=-328 [Clostridium bolteae ATCC BAA-613]
ATAGCAAAGCTAAGCGCCATGCACCTTTTAGCGGGTACGTGAACAGCAGGAACGTCTGCTGCCGTTTATAAGGTTAACGAGGTGGAGAGAGAATCGAGAAATTCGGCGGGTGCTCTCCCATGCTGTCCGGGCGTGTTGCATACTGGAAAATATGCGGGTAACTGCAAAACAAAGCCAGTGTGACCGGATGTA
# RNA - TPP
>CLOBOL_02869(thiD) Score=51.8 Pos=-253 [Clostridium bolteae ATCC BAA-613]
TTGTAAATAAACGGGGAGCTCACTTAAGTGGGCTGAGAGTAAGCTGTTCATGCTTAGACCCATTACCTGATTTGGATAATGCCAACGTAGGGACCATAACGGACGATTGCC
>CLOBOL_04495(thiW) Score=60.6 Pos=-118 [Clostridium bolteae ATCC BAA-613]
CTAAATGACAACAGGGAGCTTGTGAAGCAGGCTGAGAGGAAGTAATCGAACTTCGACCTATCGCACCTGATTTGGGTAATGCCAACGTAGGGAAATATGAGACATGTATGT
>CLOBOL_05155(COG0011) Score=61 Pos=-189 [Clostridium bolteae ATCC BAA-613]
ACAATGAAAAGGGGTGCTGGAGTGGAATCCGGCTGAGATGGAATATGTTCTGAACCCTGATACCTGATCTGGATAATGCCAGCGTAGGAAGCCTGCAGAAGATGTGAATTT
# RNA - ydaO-yuaA
>CLOBOL_01252(COG0591) Score=79.8 Pos=-327 [Clostridium bolteae ATCC BAA-613]
TCACCAAGTCGCTTAATGCTGCTATGCAGCAGTGGGAGAACCGATTTTTAGGGGTGTATTCATCCGTCTGAGCCTGTCGCGGCTCCCGGATGATAGGGAACCTTTCTTTCCCGAACCCGGCAGCTAATCTCATAGGCGGAAGAGGGACAGGGACA
# RNA - yybP-ykoY
>CLOBOL_01900 Score=43.1 Pos=-214 [Clostridium bolteae ATCC BAA-613]
CAGTTCCAATAAAAGGGAGTAGCGAACCACCAGAAGGTGGATTTTAAATCGTCATCTCGGTGCCGGAGGCACCCGTATAAAATGAAATGTGCAAGACTTTTATTGTGGCA
>CLOBOL_04443(atcL) Score=33.8 Pos=-268 [Clostridium bolteae ATCC BAA-613]
GGAACAGCTCGAAAGGGAGTAGTTTAGATATATTGTCAACAACCTCGGTTCCAACGGAACCTGGCAATATATGCCTTTATGGTTACAAGACTTTTATGCGTGGT
>CLOBOL_03265(COG1971) Score=49.7 Pos=-186 [Clostridium bolteae ATCC BAA-613]
AGCAAGTGATAAGGGAGTAATTGGCATGCCCCGCCCTGCCGGGCATGTAATAAGGTCAACATACTGATAGTTTCTATCTGGCTTTATTTGAAACAATGAGACTTATCTACAGCATTC
# RNA - THF
>CLOBOL_05170(folT) Score=86.3 Pos=-346 [Clostridium bolteae ATCC BAA-613]
GCAGAGTAGGTATATGTGCGTTAAGTGCCGGCTGGACAGGGAGTTGTCAGCTGGACGAAAGAGGATTCCCAAAGGGAAACTGTCTGCGGTACATATGCCGCATCCCGCTGCAAC
# TF - HrcA: CLOBOL_02018
>CLOBOL_06802(groES) Score=7.2 Pos=-124 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCAACTCTTGACAGTGCTAA
>CLOBOL_06029(htpG) Score=7.5 Pos=-130 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCAACAAAAATGAGTGCTAA
>CLOBOL_02018(hrcA) Score=6.9 Pos=-16 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCCCGAACGTTGAGTGCTAA
>CLOBOL_03752(hsp20) Score=6.1 Pos=-167 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCGACTCTTGACTTTGCTAA
>CLOBOL_01718(clpB) Score=7 Pos=-149 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCGACCCTTGACAGTGCTAA
>CLOBOL_03574(hsp20) Score=7.2 Pos=-75 [Clostridium bolteae ATCC BAA-613]
TTAGCACTCACCTCTTGACAGTGCTAA
# TF - ArgR: CLOBOL_03166
>CLOBOL_01168(argG) Score=5.2 Pos=-10 [Clostridium bolteae ATCC BAA-613]
TTGTATATTTATGAAA
>CLOBOL_01168(argG) Score=5.5 Pos=-93 [Clostridium bolteae ATCC BAA-613]
TTTCATAATTATACAT
>CLOBOL_01170(argC) Score=5.2 Pos=-211 [Clostridium bolteae ATCC BAA-613]
TTTCATAAATATACAA
>CLOBOL_01170(argC) Score=5.5 Pos=-128 [Clostridium bolteae ATCC BAA-613]
ATGTATAATTATGAAA
>CLOBOL_06058(argF) Score=5 Pos=-38 [Clostridium bolteae ATCC BAA-613]
ATGCATAAAGATGCAT
>CLOBOL_06058(argF) Score=5.5 Pos=-28 [Clostridium bolteae ATCC BAA-613]
ATGCATAAATATAAAT
# TF - Rex: CLOBOL_04148
>CLOBOL_06541(adhE) Score=4.8 Pos=-135 [Clostridium bolteae ATCC BAA-613]
TTGACATTTTTTTAACGA
>CLOBOL_00811(stpK) Score=5.2 Pos=-119 [Clostridium bolteae ATCC BAA-613]
ACGTTAAAAATTTATCAA
>CLOBOL_06541(adhE) Score=5.6 Pos=-93 [Clostridium bolteae ATCC BAA-613]
TTGTTAATTAATTATCAA
>CLOBOL_05214(gap) Score=5.3 Pos=-54 [Clostridium bolteae ATCC BAA-613]
TTGATTAATATTTAACAA
>CLOBOL_03318(ladH) Score=5.7 Pos=-92 [Clostridium bolteae ATCC BAA-613]
TTGTTATAATATTAACAA
>CLOBOL_02749(fba) Score=5.2 Pos=-37 [Clostridium bolteae ATCC BAA-613]
TAGTTAATAAAATAACAA
>CLOBOL_05631(phf1) Score=5.6 Pos=-61 [Clostridium bolteae ATCC BAA-613]
TTGATATAATTTTAACAA
>CLOBOL_06020(pncB) Score=5.5 Pos=-141 [Clostridium bolteae ATCC BAA-613]
TTGTTAAATTTTTATCAT
>CLOBOL_05166(pgpB) Score=5.4 Pos=-81 [Clostridium bolteae ATCC BAA-613]
TTGTTAAAATATTAACAG
>CLOBOL_02457(COG1959) Score=5.4 Pos=-33 [Clostridium bolteae ATCC BAA-613]
TTGTTACAATTTTAACAA
>CLOBOL_00463(asrA) Score=4.6 Pos=-133 [Clostridium bolteae ATCC BAA-613]
ATGATAAAAATTTATTAT
>CLOBOL_00463(asrA) Score=5.4 Pos=-75 [Clostridium bolteae ATCC BAA-613]
TTGTTATAATAATAACAT
>CLOBOL_04148(rex) Score=4.3 Pos=-79 [Clostridium bolteae ATCC BAA-613]
TTGACATTTTTTTGACGT
# TF - LexA: CLOBOL_03828
>CLOBOL_02320(recA) Score=4.9 Pos=-8 [Clostridium bolteae ATCC BAA-613]
GAGAACATTTGTTCGC
>CLOBOL_03828(lexA) Score=4.5 Pos=-46 [Clostridium bolteae ATCC BAA-613]
CAGAACGTCTGTTCTT
>CLOBOL_03828(lexA) Score=5.1 Pos=-8 [Clostridium bolteae ATCC BAA-613]
CAGAACAAATGTTTGT
>CLOBOL_00438(umuC) Score=5.3 Pos=-122 [Clostridium bolteae ATCC BAA-613]
AAGAACAAATGTTCGA
>CLOBOL_04661(COG4277) Score=5.2 Pos=-8 [Clostridium bolteae ATCC BAA-613]
AAGAACAAATGTTCTT
>CLOBOL_04661(COG4277) Score=4.7 Pos=50 [Clostridium bolteae ATCC BAA-613]
GCAAACATACGTTCTG
>CLOBOL_03827(PF01476) Score=5.1 Pos=-160 [Clostridium bolteae ATCC BAA-613]
ACAAACATTTGTTCTG
>CLOBOL_03827(PF01476) Score=4.5 Pos=-122 [Clostridium bolteae ATCC BAA-613]
AAGAACAGACGTTCTG
>CLOBOL_06773(GNAT) Score=5.1 Pos=-8 [Clostridium bolteae ATCC BAA-613]
ACAAACAAATGTTCTG
>CLOBOL_04045(PS51257) Score=5.1 Pos=-34 [Clostridium bolteae ATCC BAA-613]
TAGAACATATGTTCTG
# RNA - TPP
>CLOBOL_02869(thiD) Score=51.8 Pos=-253 [Clostridium bolteae ATCC BAA-613]
TTGTAAATAAACGGGGAGCTCACTTAAGTGGGCTGAGAGTAAGCTGTTCATGCTTAGACCCATTACCTGATTTGGATAATGCCAACGTAGGGACCATAACGGACGATTGCC
>CLOBOL_04495(thiW) Score=60.6 Pos=-118 [Clostridium bolteae ATCC BAA-613]
CTAAATGACAACAGGGAGCTTGTGAAGCAGGCTGAGAGGAAGTAATCGAACTTCGACCTATCGCACCTGATTTGGGTAATGCCAACGTAGGGAAATATGAGACATGTATGT
# RNA - FMN
>CLOBOL_02805(ribD) Score=117.1 Pos=-688 [Clostridium bolteae ATCC BAA-613]
AATATCTTCAGGGCAGGGTGCAATTCCCTACCGGTGGTACAGCCCACGAGCCGCAAGGCATGATTCGGTGAAACTCCGAAGCCGACAGTACAGTCTGGATGAAAGAAGATGGAACG
>CLOBOL_02256(ribU) Score=114.4 Pos=-352 [Clostridium bolteae ATCC BAA-613]
TAAAGTTCTTCGGGGCAGGGTGTGATTCCCTACCGGCGGTAATAGTCCGCGACCCGCTACGGCGGCTGATCTGGTGTGATTCCAGAACCGACAGTATAGTCTGGATGAGAGAAGAAGGTG
# TF - TreR: CLOBOL_05032
>CLOBOL_05033(treP) Score=5.3 Pos=-89 [Clostridium bolteae ATCC BAA-613]
AACTTGTTTAAACAAGAT
>CLOBOL_05033(treP) Score=4.9 Pos=-54 [Clostridium bolteae ATCC BAA-613]
TACTTGTTTAAACAAGAT
# TF - YtrA: CLOBOL_00493
>CLOBOL_00493(ytrA) Score=6.2 Pos=-65 [Clostridium bolteae ATCC BAA-613]
AACTGTATTAATATACTTAATACAGAT
# TF - BirA: CLOBOL_06056
>CLOBOL_00883(SSF54637) Score=9 Pos=-66 [Clostridium bolteae ATCC BAA-613]
TTGTTAAC----------------GTTGACAA
# TF - CLOBOL_00921: CLOBOL_00921
>CLOBOL_00921(CLOBOL_00921) Score=8.7 Pos=-102 [Clostridium bolteae ATCC BAA-613]
GAATTGTAT---AGACAATTT
>CLOBOL_00922(CLOBOL_00922) Score=8.7 Pos=-105 [Clostridium bolteae ATCC BAA-613]
AAATTGTCT---ATACAATTC
# TF - PdxR: CLOBOL_06805
>CLOBOL_05306(pdxU) Score=10.4 Pos=-104 [Clostridium bolteae ATCC BAA-613]
ATCTGGACT-(15)-AACTGGATA-(8)-AGTCCACCT
>CLOBOL_04694(pdxU) Score=11.4 Pos=-124 [Clostridium bolteae ATCC BAA-613]
AACTGGACT-(15)-AACTGGATA-(8)-ATTCCACTT
# TF - CzrA: CLOBOL_01424
>CLOBOL_01424(czrA) Score=6.2 Pos=-55 [Clostridium bolteae ATCC BAA-613]
CATATGAACAATCATTCATATG
# TF - Fur: CLOBOL_05844, CLOBOL_05592
>CLOBOL_03816(PF12672) Score=5.3 Pos=-289 [Clostridium bolteae ATCC BAA-613]
AATGAGAAAAAAACTCAAT
>CLOBOL_05489(PF10087) Score=4.9 Pos=-113 [Clostridium bolteae ATCC BAA-613]
CATGATAAACTTTCTCATG
>CLOBOL_00281(feoB) Score=6.2 Pos=-36 [Clostridium bolteae ATCC BAA-613]
ATTGATAAATTTTCTCAAT
>CLOBOL_05591(BACPEC_03058) Score=5.9 Pos=-186 [Clostridium bolteae ATCC BAA-613]
ATTGAGAAAAAATATCAAT
# TF - UxuR: CLOBOL_01979
>CLOBOL_06887(uxaB2) Score=6.3 Pos=-42 [Clostridium bolteae ATCC BAA-613]
AAATGTAAGCACTTACAAAA
>CLOBOL_06887(uxaB2) Score=5.8 Pos=-139 [Clostridium bolteae ATCC BAA-613]
AAATGTAAATACTTACAAAA
>CLOBOL_01311(pfkA) Score=6.4 Pos=-37 [Clostridium bolteae ATCC BAA-613]
TTTTGTAAGCGCTTACAATT
>CLOBOL_01978(uxaA) Score=6.3 Pos=-89 [Clostridium bolteae ATCC BAA-613]
AATTGTAAGCACTTACAAAA
>CLOBOL_01978(uxaA) Score=5.8 Pos=-192 [Clostridium bolteae ATCC BAA-613]
TTCTGTAAGCGCTTACAAGC
>CLOBOL_01979(uxuR) Score=6.3 Pos=-137 [Clostridium bolteae ATCC BAA-613]
TTTTGTAAGTGCTTACAATT
>CLOBOL_01979(uxuR) Score=5.8 Pos=-34 [Clostridium bolteae ATCC BAA-613]
GCTTGTAAGCGCTTACAGAA
# TF - IdeR: CLOBOL_00284, CLOBOL_01420, CLOBOL_05596
>CLOBOL_01420(ideR) Score=4.3 Pos=-91 [Clostridium bolteae ATCC BAA-613]
CAGATTAGCACTTTCTAACTCT
>CLOBOL_05596(ideR) Score=5.2 Pos=-140 [Clostridium bolteae ATCC BAA-613]
ATGTTTAGTGTATGCTATCTTT
>CLOBOL_00284(ideR) Score=4.4 Pos=-193 [Clostridium bolteae ATCC BAA-613]
AAAGTTATGGTATCCTAACTGC
>CLOBOL_05595 Score=4.8 Pos=-210 [Clostridium bolteae ATCC BAA-613]
GATGTTAGAAAAATATAACTAA
>CLOBOL_05595 Score=5.7 Pos=-104 [Clostridium bolteae ATCC BAA-613]
AAAGATAGCATACACTAAACAT
>CLOBOL_05594(feoB) Score=5 Pos=-51 [Clostridium bolteae ATCC BAA-613]
ATAGTTAGCGAAAGCTAATGAA
>CLOBOL_05594(feoB) Score=4.3 Pos=-31 [Clostridium bolteae ATCC BAA-613]
AAAATAAGAAAAATATAACAAG
>CLOBOL_00283 Score=4.3 Pos=-81 [Clostridium bolteae ATCC BAA-613]
GCAGTTAGGATACCATAACTTT
>CLOBOL_00460(COG0426) Score=5.4 Pos=-107 [Clostridium bolteae ATCC BAA-613]
ATTATTAGTGTACACTAATTTA
# TF - NrdR: CLOBOL_00526
>CLOBOL_02823(nrdD) Score=4 Pos=-171 [Clostridium bolteae ATCC BAA-613]
ATACATCTTATCGTAT
>CLOBOL_02823(nrdD) Score=5 Pos=-140 [Clostridium bolteae ATCC BAA-613]
ACACAACATTTAGTGG