# TF - CymR: BH1259
>BH0088(cysK) Score=5.2 Pos=-39 [Bacillus halodurans C-125]
GAAAACCAATAAATTTACTTGGGATTA
>BH1485(BH1485) Score=5.3 Pos=-73 [Bacillus halodurans C-125]
TAAATCATATCAAATTACATGGAATTA
>BH1489(cysC) Score=5.3 Pos=-53 [Bacillus halodurans C-125]
TAAAACATAGTAAACAGATATGAATTT
>BH0609(cysJ) Score=5.7 Pos=-87 [Bacillus halodurans C-125]
TAAAACCAATTTGACTTATCGGAATAA
>BH3125(BH3125) Score=4.8 Pos=-142 [Bacillus halodurans C-125]
TAAAACCCACTTGACAGATGGGGATTA
>BH3125(BH3125) Score=4.6 Pos=-50 [Bacillus halodurans C-125]
TAAAACAGACTTTTCCGATCTGTTTTA
# TF - Zur: BH1396
>BH1394(znuC) Score=5 Pos=-72 [Bacillus halodurans C-125]
TAAATCGGAATGATTCTTAATAT
>BH1790(yciC) Score=5.5 Pos=-54 [Bacillus halodurans C-125]
CAAATCGTAATGATAACTTTTAT
>BH1790(yciC) Score=6.7 Pos=-195 [Bacillus halodurans C-125]
CAAAGCGTAATTATTACGATTTA
>BH0366(BH0366) Score=6.6 Pos=-40 [Bacillus halodurans C-125]
TAAATAGGAATTATTACGATTTA
>BH0998(folE2) Score=6.2 Pos=-41 [Bacillus halodurans C-125]
TAAATCGTAATTATTCTTATTTA
# TF - XylR: BH2758
>BH2120(xynA) Score=5.8 Pos=-192 [Bacillus halodurans C-125]
AGTTTGTTCACTGGATCAACTAAGT
>BH2758(xylR) Score=6.7 Pos=-151 [Bacillus halodurans C-125]
ACTTAGTTTATTCAATAGACAAACT
>BH3678(BH3678) Score=6.1 Pos=-165 [Bacillus halodurans C-125]
ACTTTGTTTAATGGTAAAACAAAGT
>BH2757(xylA) Score=6.7 Pos=-102 [Bacillus halodurans C-125]
AGTTTGTCTATTGAATAAACTAAGT
# TF - TreR: BH0873
>BH2216(treP) Score=6.9 Pos=-102 [Bacillus halodurans C-125]
TAACTTGTATATACAAGATA
>BH2216(treP) Score=5.2 Pos=-65 [Bacillus halodurans C-125]
GGACTTGTATATACAAATTC
>BH0872(treA) Score=7 Pos=-100 [Bacillus halodurans C-125]
CAACTTGTATATACAAGTTA
# TF - Rex: BH0551
>BH3937(ldh) Score=5.1 Pos=-44 [Bacillus halodurans C-125]
CATGTGAAAATATTCACAAA
>BH3937(ldh) Score=5.7 Pos=-219 [Bacillus halodurans C-125]
CATGTGAAATATTTCACAAA
>BH3937(ldh) Score=6.2 Pos=-276 [Bacillus halodurans C-125]
AATGTGAAATATTTCACAAA
# TF - PerR: BH0951
>BH3116(BH3116) Score=4.1 Pos=-114 [Bacillus halodurans C-125]
TGATAAAAACTATAG
>BH0744(zosA) Score=4.3 Pos=-83 [Bacillus halodurans C-125]
TAATGATGATTATTA
>BH0744(zosA) Score=5 Pos=-189 [Bacillus halodurans C-125]
TTAAAATTATTATTG
>BH0744(zosA) Score=4.4 Pos=-206 [Bacillus halodurans C-125]
CAATAATTTTTATTA
>BH0951(perR) Score=5.4 Pos=-54 [Bacillus halodurans C-125]
TTATAAAGATTATAA
>BH3048(hemA) Score=4.1 Pos=-83 [Bacillus halodurans C-125]
TTAGACATGTTATAA
>BH3048(hemA) Score=5.3 Pos=-249 [Bacillus halodurans C-125]
TAATAATAATTCTAA
>BH1527(fur) Score=5.1 Pos=-77 [Bacillus halodurans C-125]
TAATAATCATTATTA
>BH1527(fur) Score=4.4 Pos=-101 [Bacillus halodurans C-125]
TAATAATAATTATCT
>BH1527(fur) Score=4.3 Pos=-118 [Bacillus halodurans C-125]
TTATAACAAATATTA
>BH1951(yxbB) Score=5.5 Pos=-55 [Bacillus halodurans C-125]
TTAGAATCATTATAA
# TF - NiaR: BH1216
>BH1217(nifS) Score=6.4 Pos=-102 [Bacillus halodurans C-125]
TACATATGTCTTGACATCTATA
>BH1218(nadB) Score=6.4 Pos=-39 [Bacillus halodurans C-125]
TATAGATGTCAAGACATATGTA
>BH3254(niaY) Score=5.3 Pos=-85 [Bacillus halodurans C-125]
GAAATGTGTCTTGTCATGTGTA
# TF - MtlR: BH3853
>BH3854(mtlA) Score=7.9 Pos=-90 [Bacillus halodurans C-125]
TTGTCACC------AATGACGA
# TF - MntR: BH2807
>BH1389(mntB) Score=6.2 Pos=-180 [Bacillus halodurans C-125]
AAAGTTTACTTAGGGAAACTTT
>BH0516(mntA) Score=5.5 Pos=-54 [Bacillus halodurans C-125]
TGTTTTGCCTTGGGGAAACTTT
# TF - LexA: BH2356
>BH2741(yqjW) Score=5 Pos=-30 [Bacillus halodurans C-125]
CAGAACAAATGTTCTT
>BH2741(yqjW) Score=4 Pos=-57 [Bacillus halodurans C-125]
ACGAACAAATATTCAC
>BH2354(yneB) Score=4.8 Pos=-288 [Bacillus halodurans C-125]
ACAAACAAGTGTTCTT
>BH2354(yneB) Score=4.6 Pos=-317 [Bacillus halodurans C-125]
GCAAACATAAGTTCTA
>BH2963(yhjD) Score=4.5 Pos=-40 [Bacillus halodurans C-125]
ACGAACACATGTTCCT
>BH3595(uvrB) Score=4.9 Pos=-91 [Bacillus halodurans C-125]
CAAAACAAACGTTCGT
>BH2383(recA) Score=4.9 Pos=-121 [Bacillus halodurans C-125]
GCGAATAAATGTTCGT
>BH2383(recA) Score=4 Pos=-343 [Bacillus halodurans C-125]
AAAAATTCACGTTTGT
>BH2140(parE) Score=4.9 Pos=-72 [Bacillus halodurans C-125]
CCGAACATGCGTTTGT
>BH2356(lexA) Score=4.9 Pos=-78 [Bacillus halodurans C-125]
TAGAACTTATGTTTGC
>BH2356(lexA) Score=4.7 Pos=-107 [Bacillus halodurans C-125]
AAGAACACTTGTTTGT
>BH1502(BH1502) Score=4.8 Pos=-51 [Bacillus halodurans C-125]
TCGAATGTACGTTCGT
>BH1502(BH1502) Score=4.8 Pos=-71 [Bacillus halodurans C-125]
ACGAACGTACGTTCTT
>BH0831(vpr) Score=4.3 Pos=17 [Bacillus halodurans C-125]
TCGAACTTTTGTTAGC
>BH0648(pcrA) Score=4.6 Pos=-8 [Bacillus halodurans C-125]
AAGAACAAGTGTTTGG
# TF - GanR: BH2018
>BH2019(ganO) Score=5.9 Pos=-127 [Bacillus halodurans C-125]
TTTCCGAAAATATTTTACTCAT
# TF - HrcA: BH1344
>BH1007(htpG) Score=7.1 Pos=-126 [Bacillus halodurans C-125]
TTAGCACTCGTTGCTTGCAAGTGCTAA
>BH1344(hrcA) Score=7.3 Pos=-114 [Bacillus halodurans C-125]
TTAGCACTCGAACTATGAGAGTGCTAA
>BH0561(groES) Score=7.5 Pos=-66 [Bacillus halodurans C-125]
TTAGCACTCGTTTGAAGAGAGTGCTAA
# TF - Fur: BH1527
>BH0303(yfhC) Score=6.1 Pos=-91 [Bacillus halodurans C-125]
TTTGAAAATGATTATCATT
>BH1025(yclN) Score=6.2 Pos=-49 [Bacillus halodurans C-125]
ACTGATAATGATTATCACT
>BH1025(yclN) Score=6.1 Pos=-71 [Bacillus halodurans C-125]
AATGATAATGCTTATCATT
>BH0567(nikA) Score=4.6 Pos=-35 [Bacillus halodurans C-125]
ATTGTTAATTATATTCAGA
>BH0567(nikA) Score=6.1 Pos=-51 [Bacillus halodurans C-125]
TTTGAAAATGATTATCATT
>BH0512(BH0512) Score=6.2 Pos=-52 [Bacillus halodurans C-125]
AATGAAAATCATTCTCATT
>BH0513(futB) Score=5.5 Pos=-92 [Bacillus halodurans C-125]
AACGATTATCATTCTCAAT
>BH0513(futB) Score=5.3 Pos=-98 [Bacillus halodurans C-125]
GTTGACAACGATTATCATT
>BH1527(fur) Score=5.4 Pos=-79 [Bacillus halodurans C-125]
AATAATAATCATTATTAAT
>BH1527(fur) Score=4.7 Pos=-103 [Bacillus halodurans C-125]
ACTAATAATAATTATCTGT
>BH1083(fhuB) Score=6.5 Pos=-51 [Bacillus halodurans C-125]
AGTGATAATGATTATCAAT
>BH2624(dat) Score=6.5 Pos=-59 [Bacillus halodurans C-125]
AATGATAATCATTATCACT
>BH2624(dat) Score=5.9 Pos=-100 [Bacillus halodurans C-125]
GATGATTATCATTATCAAT
>BH0612(BH0612) Score=4.1 Pos=-62 [Bacillus halodurans C-125]
ACTAATTATAATAATCAGA
>BH3891(ywjA) Score=6.1 Pos=-52 [Bacillus halodurans C-125]
ATTGAGAATGAATATCAAT
>BH3883(yetG) Score=6 Pos=-54 [Bacillus halodurans C-125]
TTTGATAATGATAATCAAT
>BH3883(yetG) Score=6 Pos=-48 [Bacillus halodurans C-125]
AATGATAATCAATATCAAA
# TF - Fnr: BH0231
>BH0228(BH0228) Score=5.7 Pos=-361 [Bacillus halodurans C-125]
TGTGATATAGATCACA
>BH3937(ldh) Score=4.8 Pos=-42 [Bacillus halodurans C-125]
TGTGAAAATATTCACA
>BH3937(ldh) Score=6 Pos=-217 [Bacillus halodurans C-125]
TGTGAAATATTTCACA
>BH3937(ldh) Score=6 Pos=-274 [Bacillus halodurans C-125]
TGTGAAATATTTCACA
>BH0740(coxA) Score=5.8 Pos=-224 [Bacillus halodurans C-125]
TGTGATATAAGTCACA
>BH0229(arfM) Score=4.8 Pos=-74 [Bacillus halodurans C-125]
TGTGAACCATGTCACT
# TF - CggR: BH3561
>BH3561(cggR) Score=6.6 Pos=-77 [Bacillus halodurans C-125]
CGGGACGTAAAATGTCTATGAGGGTCAAAAAACGTCC
# TF - BirA: BH1685
>BH3358(bioY1) Score=7.8 Pos=-33 [Bacillus halodurans C-125]
ATGTTAAC---------------GTAAACAT
>BH3358(bioY1) Score=8.6 Pos=-87 [Bacillus halodurans C-125]
ATGTCAAC---------------GTTGACAA
>BH3907(bioF) Score=8.8 Pos=-66 [Bacillus halodurans C-125]
ATGTTAAC---------------GTTAACAA
>BH1748(bioB) Score=8.7 Pos=-56 [Bacillus halodurans C-125]
TTGTTAAC---------------GTTTACAA
>BH0783(bioD) Score=8.7 Pos=-42 [Bacillus halodurans C-125]
ATGTTAAC---------------GTTAACAT
# TF - ArgR: BH2777
>BH1461(artP) Score=4.3 Pos=-63 [Bacillus halodurans C-125]
GTTAATATACATTCAT
>BH1461(artP) Score=4.1 Pos=-67 [Bacillus halodurans C-125]
TTGTGTTAATATACAT
>BH3187(argG) Score=4.4 Pos=-111 [Bacillus halodurans C-125]
ATGAATATTAATAAGT
>BH3187(argG) Score=4.2 Pos=-54 [Bacillus halodurans C-125]
ATGTATAAAAATAATA
>BH2900(argC) Score=4.1 Pos=-96 [Bacillus halodurans C-125]
ATATATAAAAATACAG
>BH2900(argC) Score=4.7 Pos=-76 [Bacillus halodurans C-125]
ATTTATTTTTATTCAG
>BH2896(carA) Score=4.6 Pos=-55 [Bacillus halodurans C-125]
ATGTATAAAAATTCTT
# TF - SinR: BH2125
>BH2131(yqxM) Score=5.7 Pos=-131 [Bacillus halodurans C-125]
GTTCTTTATAAAAAAC
# TF - PurR: BH0062
>BH2785(nusB) Score=7.9 Pos=-129 [Bacillus halodurans C-125]
GAAAACGAAAGTTG----------------AATTGTTCTGTTTT
>BH1514(xpt) Score=9.1 Pos=-301 [Bacillus halodurans C-125]
AAACACGAATAAAT----------------ATTCATTCGTTTTT
>BH0623(purE) Score=9.4 Pos=-353 [Bacillus halodurans C-125]
AAAAACGAACATTG----------------TATTGTTCGAGTTT
>BH0062(purR) Score=8.6 Pos=-57 [Bacillus halodurans C-125]
GAAACCGTATGAAA----------------AAATATTCGGTTTT
>BH4028(purA) Score=8.7 Pos=-134 [Bacillus halodurans C-125]
TGAACCGAACAAAT----------------AAATGTTCGGATTT
>BH1470(BH1470) Score=8.9 Pos=-119 [Bacillus halodurans C-125]
AAAAACGAACATTA----------------CAATATTCGATTAA
>BH0608(pbuG) Score=9.3 Pos=-294 [Bacillus halodurans C-125]
TAAGACGAATATTA----------------TAATGTTCGTCTTT
>BH3765(glyA) Score=6.7 Pos=-130 [Bacillus halodurans C-125]
GAACATGAAAGTTT----------------AATTATGCGGAAAT
>BH2816(BH2816) Score=6.6 Pos=-117 [Bacillus halodurans C-125]
AAACGAGATTTTAA----------------TAACGTTCTTTTTT
# TF - YdfD/YisV: BH0432
>BH0432(yisV) Score=-0.9 Pos=-56 [Bacillus halodurans C-125]
TCATCCAGTTCGCCTAGCTTGAGGCCAACCA
>BH0431(yisU) Score=5.8 Pos=-90 [Bacillus halodurans C-125]
TGGTTGGCCTCAAGCTAGGCGAACTGGATGA
# TF - CcpA: BH3241
>BH2819(yqgW) Score=4.5 Pos=-168 [Bacillus halodurans C-125]
AAGAAAACGTTTAAAA
>BH1826(acoR) Score=4.7 Pos=-117 [Bacillus halodurans C-125]
TTGTTAGCGCTTTCTT
>BH3921(gmuB) Score=4.2 Pos=-36 [Bacillus halodurans C-125]
GTGAAAGCGCTTATCA
>BH2019(cycB) Score=4.4 Pos=-55 [Bacillus halodurans C-125]
TATAAAACGCTTTCAT
>BH3824(BH3824) Score=4.7 Pos=-114 [Bacillus halodurans C-125]
TTTAAAGCGTTTCCAA
>BH3442(araF) Score=5 Pos=-64 [Bacillus halodurans C-125]
ATGACAACGCTTTCAT
>BH0701(dctP) Score=4.7 Pos=-76 [Bacillus halodurans C-125]
TTGAAAAGGTTTACAA
>BH3839(citS) Score=4.8 Pos=-41 [Bacillus halodurans C-125]
ATGAAAGCGTTTATTA
>BH1140(msmX) Score=4.6 Pos=-47 [Bacillus halodurans C-125]
TTGTAAGCGCTACAAT
>BH2820(yqgX) Score=4.5 Pos=-112 [Bacillus halodurans C-125]
TTTTAAACGTTTTCTT
>BH2023(ganB) Score=5.1 Pos=-47 [Bacillus halodurans C-125]
ATGTAAGCGTTTACTA
>BH3926(dagA) Score=4.5 Pos=-113 [Bacillus halodurans C-125]
AATAAAGCGCTTTCAT
>BH1117(rhiL) Score=4.9 Pos=-33 [Bacillus halodurans C-125]
ATGTAAGCACTTTCAA
>BH0745(citMII) Score=5 Pos=-56 [Bacillus halodurans C-125]
TTGAAAGCGCTTAATA
>BH2312(iolA) Score=4.5 Pos=-151 [Bacillus halodurans C-125]
AAAAAAGCGTTTACAA
>BH2312(iolA) Score=4.5 Pos=-85 [Bacillus halodurans C-125]
ATGAAATCGATTTCAA
>BH2320(iolB) Score=4.5 Pos=-44 [Bacillus halodurans C-125]
ATGAAATCGATTACAA
>BH2320(iolB) Score=4.5 Pos=-142 [Bacillus halodurans C-125]
CTGAAAGCGCTTTTAA
>BH2320(iolB) Score=4.8 Pos=-281 [Bacillus halodurans C-125]
TTGAAAACGATTTCAG
>BH0481(ytcP) Score=4.9 Pos=-66 [Bacillus halodurans C-125]
ATGATAGCGCTTTCTT
>BH3448(rbsB) Score=4.6 Pos=-19 [Bacillus halodurans C-125]
TTGAAAGGGGTTTCAT
>BH2757(xylA) Score=4.7 Pos=-33 [Bacillus halodurans C-125]
TTGATAACGCTTACTT
>BH3234(acsA) Score=4.4 Pos=6 [Bacillus halodurans C-125]
TTGCAAGCGCTTCCAG
>BH3232(bglS) Score=5.1 Pos=-127 [Bacillus halodurans C-125]
TTGAAAGCGCTTTCGA
>BH0902(araP) Score=5.1 Pos=-85 [Bacillus halodurans C-125]
TTGTAAACGCTTTCTT
>BH0905(araN) Score=5 Pos=-113 [Bacillus halodurans C-125]
ATGTAAACGTTAACAA
>BH3854(mtlA) Score=4.3 Pos=-39 [Bacillus halodurans C-125]
ATGAGAGCGCTTTATT
>BH1131(yngI) Score=4.6 Pos=-251 [Bacillus halodurans C-125]
AAGAAACCGTTTACAA
>BH1130(yngJ) Score=4.7 Pos=-105 [Bacillus halodurans C-125]
TTGGTAGCGCTTACAT
>BH1878(abnB) Score=4.2 Pos=-40 [Bacillus halodurans C-125]
TTGTAAGGGTTTTCAC
>BH2227(msmR) Score=4.5 Pos=-95 [Bacillus halodurans C-125]
TTGAAAACGCTTACCC
>BH1064(BH1064) Score=4.7 Pos=-114 [Bacillus halodurans C-125]
ATGTAAGCGATTACTT
>BH2166(kduI) Score=5.1 Pos=-48 [Bacillus halodurans C-125]
TTGAAAGCGTTATCTT
>BH3801(mmgA) Score=5 Pos=-65 [Bacillus halodurans C-125]
ATGTAAGCGCTTAAAT
>BH1092(glpF) Score=5 Pos=-159 [Bacillus halodurans C-125]
TTGACAGCGTTTACAA
>BH2717(glsA1) Score=5.3 Pos=-32 [Bacillus halodurans C-125]
ATGTAAACGCTTTCAT
>BH1831(lctP) Score=4.8 Pos=-70 [Bacillus halodurans C-125]
TTTAAAACGCTTACAT
>BH2216(treP) Score=4.4 Pos=136 [Bacillus halodurans C-125]
TTGAAAGCCTTGACAT
>BH2216(treP) Score=4.4 Pos=318 [Bacillus halodurans C-125]
GTGAAAACGCTTGCTG
>BH3103(lcfA) Score=4.9 Pos=448 [Bacillus halodurans C-125]
TTGTAACCGCTATCAA
>BH3823(pta) Score=4.8 Pos=-194 [Bacillus halodurans C-125]
TTGGAAACGCTTTAAA
>BH1856(sacP) Score=4.3 Pos=-170 [Bacillus halodurans C-125]
GAGAAAGCGTTGACAA
>BH0483(RmgR) Score=5.1 Pos=-228 [Bacillus halodurans C-125]
TTGTAAACGCTATCAT
>BH0483(RmgR) Score=5.4 Pos=-36 [Bacillus halodurans C-125]
TTGAAAGCGCTATCAA
>BH0193(BH0193) Score=5 Pos=-64 [Bacillus halodurans C-125]
ATGAAAGCGCATCCAA
>BH0296(bglP1) Score=5.2 Pos=-223 [Bacillus halodurans C-125]
ATGAAAGCGTTGACAA
>BH2206(odhA) Score=5 Pos=-64 [Bacillus halodurans C-125]
ATGAAAGCGTTATAAA
>BH0483(rmgR) Score=5.1 Pos=-228 [Bacillus halodurans C-125]
TTGTAAACGCTATCAT
>BH1911(lplB) Score=4.4 Pos=15 [Bacillus halodurans C-125]
GAGAAAGCGCATTCAA
>BH0483(rmgR) Score=5.4 Pos=-36 [Bacillus halodurans C-125]
TTGAAAGCGCTATCAA
>BH3680(BH3680) Score=4.9 Pos=6 [Bacillus halodurans C-125]
AGGAAAACGCTTACAA
>BH3845(BH3845) Score=4.9 Pos=-81 [Bacillus halodurans C-125]
ATGAAAGCGATTTCTT
>BH3845(BH3845) Score=4.6 Pos=24 [Bacillus halodurans C-125]
ATGATAGCGCTTTCTG
>BH2018(ganR) Score=4.6 Pos=-202 [Bacillus halodurans C-125]
TTGTAAGTGTTTTCTT
>BH3563(sigL) Score=4.4 Pos=-71 [Bacillus halodurans C-125]
TCGTAAGCGCTTACAG
>BH1425(glcK) Score=4.4 Pos=-206 [Bacillus halodurans C-125]
ATGAAAACGGTTTATG
# TF - GlnR
>BH0252(ureA) Score=5 Pos=-62 [Bacillus halodurans C-125]
TTGTCATCAAAGATAACAT
>BH0251(utrA) Score=4.8 Pos=-89 [Bacillus halodurans C-125]
ATGTAACGATTTCTAACGA
>BH1494(tnrA) Score=5.4 Pos=-111 [Bacillus halodurans C-125]
TTGTAAGAAAATCTAACAT
>BH0252(ureA) Score=4.6 Pos=-97 [Bacillus halodurans C-125]
CTGTAATCTTTTCTAACAA
>BH0251(utrA) Score=5 Pos=-193 [Bacillus halodurans C-125]
ATGTTATCTTTGATGACAA
>BH0251(utrA) Score=4.6 Pos=-158 [Bacillus halodurans C-125]
TTGTTAGAAAAGATTACAG
>BH0252(ureA) Score=4.8 Pos=-166 [Bacillus halodurans C-125]
TCGTTAGAAATCGTTACAT
# TF - MsmR: BH2227
>BH2227(msmR) Score=5.8 Pos=-97 [Bacillus halodurans C-125]
TATTGAAAACGCTTACCCTA
# TF - NrdR: BH3146
>BH0501(nrdA) Score=5.7 Pos=-395 [Bacillus halodurans C-125]
ATACAATATATAGAGT
>BH0501(nrdA) Score=5 Pos=-363 [Bacillus halodurans C-125]
TTACAATATCTAGTGT
>BH2810(nrdZ) Score=5.5 Pos=-178 [Bacillus halodurans C-125]
AATCAATATATAGTAT
>BH2810(nrdZ) Score=5.7 Pos=-145 [Bacillus halodurans C-125]
ATACTATATATTGAAT
# TF - RbsR: BH3727
>BH3727(rbsR) Score=6.7 Pos=-35 [Bacillus halodurans C-125]
ATCTGTAACCGGTTACACAT
# TF - TnrA: BH1494
>BH3867(glnA2) Score=4.9 Pos=-33 [Bacillus halodurans C-125]
TGTCACATTACATTACA
>BH3867(glnA2) Score=5.7 Pos=-103 [Bacillus halodurans C-125]
TGTCAGATAATCTAACA
>BH1772(alsT) Score=3.9 Pos=-191 [Bacillus halodurans C-125]
TGTCATTTAATGCATCA
>BH2309(pucH) Score=4.5 Pos=-260 [Bacillus halodurans C-125]
TGTCATAAAGCCTAACA
>BH2309(pucH) Score=4.2 Pos=-71 [Bacillus halodurans C-125]
TATCAGAAAATATAAAA
>BH2360(glnA) Score=5.6 Pos=-158 [Bacillus halodurans C-125]
TGTCAGATTATCTTACA
>BH3820(gltT) Score=4.2 Pos=-217 [Bacillus halodurans C-125]
TGTTAGCCTATTTGACA
>BH3820(gltT) Score=5.5 Pos=-127 [Bacillus halodurans C-125]
TGTCATAATATCTAACA
>BH3061(ilvB) Score=4.1 Pos=-93 [Bacillus halodurans C-125]
TGCTAGAAATTCTGGCA
>BH0421(nagA) Score=4.6 Pos=-178 [Bacillus halodurans C-125]
TGTTAGTAGATATAACA
>BH0422(nagP) Score=4.6 Pos=-145 [Bacillus halodurans C-125]
TGTTATATCTACTAACA
>BH0612(BH0612) Score=4.6 Pos=-80 [Bacillus halodurans C-125]
TGTAAGATATCCTCCCA
>BH3834(nrgA) Score=4 Pos=-138 [Bacillus halodurans C-125]
TGTCAGATATAGGCACA
>BH3834(nrgA) Score=4.9 Pos=-113 [Bacillus halodurans C-125]
TGTCTGATTATCTGACA
>BH3834(nrgA) Score=4.3 Pos=-41 [Bacillus halodurans C-125]
TATTAGAAAAACTTACA
>BH3641(BH3641) Score=4.3 Pos=-180 [Bacillus halodurans C-125]
TGTGAGATAATTTAGCA
>BH0758(BH0758) Score=4.8 Pos=-301 [Bacillus halodurans C-125]
TGTTAGGATTTTTAACA
>BH0758(BH0758) Score=4.2 Pos=-196 [Bacillus halodurans C-125]
TGTTAAAAAACTTCACA
>BH0746(BH0746) Score=4 Pos=-245 [Bacillus halodurans C-125]
TGATAAGTTACCTTACA
>BH0757(pucR) Score=4.2 Pos=-191 [Bacillus halodurans C-125]
TGTGAAGTTTTTTAACA
>BH0757(pucR) Score=4.8 Pos=-86 [Bacillus halodurans C-125]
TGTTAAAAATCCTAACA
>BH0757(pucR) Score=4.5 Pos=31 [Bacillus halodurans C-125]
TGTTAGATCTTCCAACA
>BH1368(yqzL) Score=4.4 Pos=-216 [Bacillus halodurans C-125]
TGCAAGAAAATGTCACA
>BH1494(tnrA) Score=5.5 Pos=-110 [Bacillus halodurans C-125]
TGTAAGAAAATCTAACA
>BH0251(urtA) Score=4.5 Pos=-192 [Bacillus halodurans C-125]
TGTTATCTTTGATGACA
>BH0251(urtA) Score=5 Pos=-157 [Bacillus halodurans C-125]
TGTTAGAAAAGATTACA
>BH0251(urtA) Score=4.4 Pos=-88 [Bacillus halodurans C-125]
TGTAACGATTTCTAACG
>BH0252(ureA) Score=4.4 Pos=-165 [Bacillus halodurans C-125]
CGTTAGAAATCGTTACA
>BH0252(ureA) Score=5 Pos=-96 [Bacillus halodurans C-125]
TGTAATCTTTTCTAACA
>BH0252(ureA) Score=4.5 Pos=-61 [Bacillus halodurans C-125]
TGTCATCAAAGATAACA
>BH1073(ysnE) Score=5.1 Pos=-87 [Bacillus halodurans C-125]
CGTCATAAAATCTAACA
>BH3406(yuiA) Score=4.1 Pos=-86 [Bacillus halodurans C-125]
TGTGAGAATACCTCGCA
>BH3408(yumC) Score=4.3 Pos=-277 [Bacillus halodurans C-125]
TGGCAAAAAAAGTGACA
>BH3408(yumC) Score=4.3 Pos=-125 [Bacillus halodurans C-125]
TGACAGATTTATTTACA
# TF - IolR1: BH2219
>BH3901(BH3901) Score=5.1 Pos=-127 [Bacillus halodurans C-125]
AGAAAGCGCTTAAC
>BH2222(BH2222) Score=5.3 Pos=-118 [Bacillus halodurans C-125]
GGAAAGCGCTTACT
>BH2222(BH2222) Score=5 Pos=-39 [Bacillus halodurans C-125]
GTTAAGCGCTTAAC
# TF - NsrR : BH1057
>BH1058(hmp) Score=6.2 Pos=-95 [Bacillus halodurans C-125]
TAAATATGTATTTTAAATATTGATTAA
>BH1058(hmp) Score=6.7 Pos=-48 [Bacillus halodurans C-125]
TAAATATGTATACAAAATACTTATTTA
# TF - HisR: BH0639
>BH3584(hisZ) Score=4.3 Pos=-71 [Bacillus halodurans C-125]
TCCTTTATCTTGTTAGTATA
>BH3584(hisZ) Score=5.6 Pos=-55 [Bacillus halodurans C-125]
TATATTAGCGAACTAAAGTA
>BH3359(yuiF) Score=5.1 Pos=-47 [Bacillus halodurans C-125]
TGATTTAATAAACTAAAGCA
# TF - ArsR: BH2996
>BH2995(BH2995) Score=6 Pos=-34 [Bacillus halodurans C-125]
ATCAAAAAAAATTGAT
>BH2996(arsR) Score=6 Pos=-91 [Bacillus halodurans C-125]
ATCAAAAAAAATTGAT
>BH2996(arsR) Score=5.8 Pos=-30 [Bacillus halodurans C-125]
ATCAAAAAAAGTTGAT
# TF - AseR: BH3000
>BH3000(aseR) Score=7.2 Pos=-55 [Bacillus halodurans C-125]
TATATAAGTATATGTTTATATA
# TF - SdpR: BH0945
>BH0945(sdpR) Score=5.9 Pos=-42 [Bacillus halodurans C-125]
ATTTAAGTAATTGCTTAAAT
# TF - RocR: BH3944
>BH3944(rocR) Score=8 Pos=-116 [Bacillus halodurans C-125]
CGAAAAAT-ATTTTTCT
>BH3944(rocR) Score=7.3 Pos=-73 [Bacillus halodurans C-125]
CGAAAAAA-AATTTGCA
>BH3943(rocD) Score=8 Pos=-172 [Bacillus halodurans C-125]
AGAAAAAT-ATTTTTCG
>BH3943(rocD) Score=7.3 Pos=-215 [Bacillus halodurans C-125]
TGCAAATT-TTTTTTCG
# TF - AcoR: BH1826
>BH1822(acoA) Score=5.7 Pos=-141 [Bacillus halodurans C-125]
GACAATGTGAGACGTAACAGTGTTGCTAGTTT
# TF - BkdR: BH2766
>BH2765(bcd) Score=5.6 Pos=-226 [Bacillus halodurans C-125]
TGCAATAATTTGCA
# TF - GmuR: BH3917
>BH3921(gmuB) Score=6.9 Pos=-81 [Bacillus halodurans C-125]
TAAAAGTATAGACATTTA
# TF - CcpN: BH1372
>BH3302(pckA) Score=5.3 Pos=-60 [Bacillus halodurans C-125]
TAAATGTGTTATACTAAATAA
>BH3149(gapB) Score=4.8 Pos=-66 [Bacillus halodurans C-125]
TAAAAGTGATATACTATTTAT
# RNA - SAM
>BH1253(hom) Score=90 Pos=-209 [Bacillus halodurans C-125]
ACTTATCGAGAGAGGCAGAGGGACTGACCCGATGATGCCCGGCAACCCGTTTGTTAGCCAAGCAAACGAAGGTGCTAATTTCAGCAGAATGATTTCATTCTGGAAGATAAGCGAA
>BH0835(BH0835) Score=106.5 Pos=-244 [Bacillus halodurans C-125]
TTTCTTATCCAGAGTGGTGGAGGGACTGGCCCTGTGAAGCCCGGCAACCTCTTTTTTTAAAGAAGGTGCCAATTCCAGCAGAACATGATGTTCTGAAAGATAAGAA
>BH3300(metK) Score=76.7 Pos=-268 [Bacillus halodurans C-125]
ACTCTTATCCAGAGTTGGTGGAGGGACAGGCCCGAAGAAACCCCAGCAACCAACACCTGTTAAACAAAGGTGAAAAGGTGCTAACCTGCAAGGCGTTGCCTTGAAAGATAAGAG
>BH3481(metN) Score=90.4 Pos=-331 [Bacillus halodurans C-125]
ACTCTTATCATGAGAGGTGGAGGGACTGGCCCGATGAAGCCCAGCAACCGCCAAGCAGCAAATCGCTTGGAAAAGGTGCTAATTCCTGCAAAGCGATGCTTTGAGAGATGAGAG
>BH1627(metI) Score=94.9 Pos=-281 [Bacillus halodurans C-125]
TCTTATCCAGAGAGGTGGAGGGAACGGCCCGAAGAAACCTCAGCAACCAGCCACGATCCTGTGGTCAGGTGCTAATTCCTGCAAGCATTATTTGCTTGAGAGATAAGAGGA
# TF - FadR: BH3102
>BH3488(fadN) Score=6.5 Pos=-36 [Bacillus halodurans C-125]
ATGAATGAGTATTCATTCGT
>BH3102(fadR) Score=6.9 Pos=-38 [Bacillus halodurans C-125]
ATGAATGAATACTCATTCAT
>BH3802(fadF) Score=6.5 Pos=-123 [Bacillus halodurans C-125]
ATGAGTGAATACTCATTCAT
>BH2144(BH2144) Score=6.8 Pos=-38 [Bacillus halodurans C-125]
TTGAATGAATATTCATTCAA
# TF - CysL
>BH3384(BH3384) Score=4.8 Pos=-214 [Bacillus halodurans C-125]
ATTTTTAATCTTAAT
# TF - RmgR: BH0483
>BH0484(yteP) Score=7.7 Pos=-155 [Bacillus halodurans C-125]
TCATTA-------------TCATTT
# TF - CodY: BH2462
>BH3406(yuiA) Score=4.3 Pos=-47 [Bacillus halodurans C-125]
AAAATTCTGATAATA
>BH2206(odhA) Score=4.3 Pos=-232 [Bacillus halodurans C-125]
TATTTTCAGAATTTA
>BH4033(glyP) Score=4.5 Pos=-51 [Bacillus halodurans C-125]
TATTATTTGAATATT
>BH1728(gltA) Score=4.5 Pos=-94 [Bacillus halodurans C-125]
AAATGTCAGAAAAAT
>BH0031(oppA2) Score=4.5 Pos=-295 [Bacillus halodurans C-125]
AATATTTTGACAAAT
>BH3819(pelB) Score=4.8 Pos=-174 [Bacillus halodurans C-125]
AATATTTATAAAATT
>BH3819(pelB) Score=4.5 Pos=-183 [Bacillus halodurans C-125]
TATATTCATAATATT
>BH3823(pta) Score=4.6 Pos=-114 [Bacillus halodurans C-125]
AATTTTATAAAAAAT
>BH0916(chi) Score=4.5 Pos=-125 [Bacillus halodurans C-125]
TATTTTCTAAAGATT
>BH0030(dppC) Score=4.5 Pos=-46 [Bacillus halodurans C-125]
ATTTGTCAAAATATT
>BH3488(fadN) Score=4.8 Pos=-134 [Bacillus halodurans C-125]
AATTTTCAGAAAATC
>BH1185(hpr) Score=4.7 Pos=-148 [Bacillus halodurans C-125]
ATTTTTTAAAAAATT
>BH1827(mcpC) Score=4.5 Pos=-114 [Bacillus halodurans C-125]
ATTTTTCAGATAAAT
>BH2773(spo0A) Score=5 Pos=-89 [Bacillus halodurans C-125]
AATTTTTTTAAAATT
>BH2374(BH2374) Score=4.7 Pos=-121 [Bacillus halodurans C-125]
ATTTGTCAAAAAATT
>BH3439(BH3439) Score=5 Pos=-62 [Bacillus halodurans C-125]
AATTTTCTGAATATA
>BH3439(BH3439) Score=4.5 Pos=-240 [Bacillus halodurans C-125]
AATTTTCGAAAAATA
>BH0347(oppA) Score=4.3 Pos=-32 [Bacillus halodurans C-125]
TATTTTCAAAATAGT
>BH1831(lutP) Score=4.4 Pos=-123 [Bacillus halodurans C-125]
ATTTATCAGTAAATT
>BH3820(gltO) Score=4.4 Pos=-258 [Bacillus halodurans C-125]
TATTTTTTGAAAAAA
>BH3201(ytcI) Score=4.3 Pos=-65 [Bacillus halodurans C-125]
AATATTCAAAATAAA
>BH0858(yocS) Score=4.4 Pos=26 [Bacillus halodurans C-125]
ATTTTTCAGTAAATA
>BH3062(ilvD) Score=4.5 Pos=-111 [Bacillus halodurans C-125]
TATTTTTTGACTATT
>BH3062(ilvD) Score=4.3 Pos=-217 [Bacillus halodurans C-125]
AATAGTCAAATTATT
# TF - GltC2: BH2102
>BH2102(gltC2) Score=5.7 Pos=-84 [Bacillus halodurans C-125]
ATTTTATAATTAAAT
>BH2101(gdhA) Score=5.7 Pos=-134 [Bacillus halodurans C-125]
ATTTAATTATAAAAT
# TF - AraR: BH1875
>BH1061(BH1061) Score=5.6 Pos=-172 [Bacillus halodurans C-125]
TTATTCGTACGAACAAATAA
>BH1861(abfA) Score=6.1 Pos=-198 [Bacillus halodurans C-125]
AAATTTGTACGTACAAAAAA
>BH1861(abfA) Score=5.5 Pos=-100 [Bacillus halodurans C-125]
TATTATGTACGTACAAGTTA
>BH1871(araD) Score=5.7 Pos=-71 [Bacillus halodurans C-125]
AAAATTGTACGTACAAGTGT
>BH1875(araR) Score=5.2 Pos=-36 [Bacillus halodurans C-125]
TCATTTGTACGTATAAGTTG
>BH0902(araP) Score=4.4 Pos=-49 [Bacillus halodurans C-125]
AAACGTGTACGTACACGATA
# TF - BltR: BH4046
>BH4045(BH4045) Score=5.9 Pos=-65 [Bacillus halodurans C-125]
GACTATCGTGTTACACCACACCT
# TF - NagR: BH0419
>BH0421(nagA) Score=5.2 Pos=-157 [Bacillus halodurans C-125]
AAATTGGTATATACAAATTA
>BH0422(nagP) Score=6.4 Pos=-94 [Bacillus halodurans C-125]
TAATAGGTATAGACAACTAA
>BH0419(nagR) Score=5 Pos=-153 [Bacillus halodurans C-125]
TAATTGGTATAGACATTTTA
# TF - LutR: BH1835
>BH1831(lutP) Score=6.2 Pos=-54 [Bacillus halodurans C-125]
TAAGTCATCTGATGACCTA
# TF - YhcF: BH0383
>BH0384(BH0384) Score=6 Pos=-51 [Bacillus halodurans C-125]
GTGTACTATTTCATTAGCACAA
# TF - YdfL: BH3496
>BH3495(BH3495) Score=6.3 Pos=-63 [Bacillus halodurans C-125]
GACTCTCCCCTTACTGGAGGGTT
# TF - KipR: BH1819
>BH1817(kipI) Score=5.4 Pos=-80 [Bacillus halodurans C-125]
ATTCTGAATATCGGAAC
# TF - BceR: BH3911
>BH3913(bceA) Score=7.9 Pos=-121 [Bacillus halodurans C-125]
TGTGAC-----TGTCAC
# TF - FapR: BH2494
>BH2494(fapR) Score=4.6 Pos=-110 [Bacillus halodurans C-125]
CTCTTAGTACCTAGTC
>BH0764(fabHB) Score=4.6 Pos=-65 [Bacillus halodurans C-125]
AAATTAGTACCAGATC
>BH2843(fabI) Score=4.3 Pos=-63 [Bacillus halodurans C-125]
TAATTAGGACCAAGTA
>BH2883(fabHA) Score=4.1 Pos=-69 [Bacillus halodurans C-125]
TAGTAGGTACTAATAA
# TF - IolR2: BH2313
>BH2320(iolB) Score=6.4 Pos=-45 [Bacillus halodurans C-125]
AATGAAATCGATTACAAT
>BH2312(iolA) Score=6.6 Pos=-86 [Bacillus halodurans C-125]
AATGAAATCGATTTCAAT
# TF - FruR: BH0826
>BH0826(fruR) Score=8.2 Pos=-72 [Bacillus halodurans C-125]
TGATTATTTATGATTGATTT
# TF - CtsR: BH0100
>BH3113(sspI) Score=0.3 Pos=-165 [Bacillus halodurans C-125]
TTTTCCA---TTTGACT
>BH3564(clpP) Score=-0.1 Pos=-93 [Bacillus halodurans C-125]
TTTGACC---TTTGACC
>BH0100(ctsR) Score=8.4 Pos=-86 [Bacillus halodurans C-125]
GGTCAAA---AGTCAAA
>BH2179(clpE) Score=8.5 Pos=-86 [Bacillus halodurans C-125]
AGTCAAA---AGTCAAA
# TF - CsoR: BH0558
>BH0557(copA) Score=5.3 Pos=-31 [Bacillus halodurans C-125]
ATACCTAATAGGGGTAT
>BH0556(copZ) Score=4.9 Pos=-54 [Bacillus halodurans C-125]
ATACAATAGGGGGGTAT
# TF - GlcR: BH0847
>BH0847(glcR) Score=8.6 Pos=-45 [Bacillus halodurans C-125]
ACTTATA---ACTTATA
# TF - CitT: BH3838
>BH0745(citM) Score=4.7 Pos=-163 [Bacillus halodurans C-125]
TGAACAAAATAAACAAAA
# TF - RhaR: BH1553
>BH1550(rhaEW) Score=3.9 Pos=-31 [Bacillus halodurans C-125]
CAAAATAAAACAAAAATAA
# TF - YybR/YdeP: BH0737
>BH0737(yybR) Score=5.2 Pos=-49 [Bacillus halodurans C-125]
TAGTTACATGTAGGTTACTA
>BH0738(BH0738) Score=5.2 Pos=-101 [Bacillus halodurans C-125]
TAGTAACCTACATGTAACTA
# TF - YodB/CatR: BH3303, BH0508
>BH3304(BH3304) Score=4.2 Pos=-56 [Bacillus halodurans C-125]
ACTTACTTACACAAAGT
>BH3304(BH3304) Score=4.7 Pos=-52 [Bacillus halodurans C-125]
ACTTACACAAAGTAATT
>BH3304(catD) Score=4.7 Pos=-52 [Bacillus halodurans C-125]
ACTTACACAAAGTAATT
>BH2236(yodC) Score=4.4 Pos=-63 [Bacillus halodurans C-125]
ACTTTACTTTTGTAAGT
# TF - YdfF: BH0391
>BH0391(ydfF) Score=5.7 Pos=-41 [Bacillus halodurans C-125]
TTCAACTATCATCGAA
>BH0392(ydfE) Score=5.7 Pos=-66 [Bacillus halodurans C-125]
TTCGATGATAGTTGAA
# TF - YybA: BH3077
>BH3077(yybA) Score=6.6 Pos=-42 [Bacillus halodurans C-125]
TTATTGTTGCATTTGCAATATAAA
>BH3077(yybA) Score=7 Pos=-89 [Bacillus halodurans C-125]
TTTTTGTTGCATTTACAACAAATT
>BH3078(yyaS) Score=7 Pos=-44 [Bacillus halodurans C-125]
AATTTGTTGTAAATGCAACAAAAA
>BH3078(yyaS) Score=6.6 Pos=-91 [Bacillus halodurans C-125]
TTTATATTGCAAATGCAACAATAA
# TF - YhgD: BH2145
>BH2145(yhgD) Score=6.4 Pos=-48 [Bacillus halodurans C-125]
TGACCATTTTGTTCATTTGGTCA
# RNA - FMN
>BH1554(ribD) Score=105.2 Pos=-437 [Bacillus halodurans C-125]
TTATCCTTCGGGGCTGGGTGGAAATCCCGACCGGCGGTGATGAAGCGAATGCTTCTTAGTCCGTGACCCGGTTGCTGATATCAGTAAGCGGTGGACCTGGTGAAAATCCGGGACCGACAGTGAAAGTCTGGATGGGAGAAGGAAACGTA
# RNA - TPP
>BH1431(thiC) Score=66.8 Pos=-195 [Bacillus halodurans C-125]
CAGGAGACTAGGGGTGTCTGCTTAAGTGGACTGAGAAAAAGGTGTGTTCCTTTTACCCTCATACCTGATCTGGATCATGCCAGCGTAGGGAAGTCGACTGCACGTGACGA
>BH2678(ylmB) Score=67.6 Pos=-205 [Bacillus halodurans C-125]
GAATCCACTAGGGGTGCAAACCGCTGAGAGAGATGTTTTTTAGCATCTTAACCCTCATTCACCTGATCTAGGTAATACTAGCGAAGGGAAGTGGCCATCGTCATTACT
>BH1933(thiC) Score=76.4 Pos=-253 [Bacillus halodurans C-125]
GAAATAACTAGGGGAGTCCAATGAGCTGGGCTGAGAAAAAAACGCGATGAAGTTTTTAAACCCTCGGGACCTGATCTGGATCATACCAGCGTGGGGAAGTTATCATGTTATACCAC
>BH0830(thiT) Score=77 Pos=-163 [Bacillus halodurans C-125]
ATAACCACTAGGGGTGTCGAAAGACTGAGAGAGGCGAATCCTCAACTCTTGGAACCTGATCTAGTTCATACTAGCGAAGGGAAGTGGCGCATTTCGTGAAA
# RNA - Cobalamin
>BH0284(cobT) Score=89.8 Pos=-253 [Bacillus halodurans C-125]
CTTTAATAGGCTTCTTAGGTGCCTCATTTGTAGGAGAATAGGGAAGTTCTGAAACGACGCGGAGCCCGCCACTGTAGTCGAGGAGCTGCTACAATACCACTGGGAAACTGGGAAGGTGTAGCATGCGATGAATCGGAGCCAGGAGACCTGCCTAAGAAGATGCGCTGTCATT
>BH1585(btuF) Score=118.7 Pos=-407 [Bacillus halodurans C-125]
CGTATATCGCGCTGAAGGGTCGTTCAATGTTTGAGCGTGAAAAGGGAAGTCGGTGAAAATCCGACACGGTCCCGCCACTGTAAATGGGAGAGGCTTGCAAGATCCACTGTCTAGCGACGGGAAGGGGGCAAGTACTCGATGAACATAAGTCAGGAGACCTGCCTTTCAGTTTGAGTGTGTAGC
>BH0438(metE) Score=123.6 Pos=-340 [Bacillus halodurans C-125]
ATTTCATCGTTTGGGAACAGGTACGTTAAGTCACATGATAGACTTAATGTTTAAAAGGGAATCCGGTGCAAATCCGGAGCGGTCCCGCCACTGTCATAGCTGAGTTGTAACGATATTGTCACTGACCGTTCATTGGTTGGGAAGACTGTTGCAATGTTGACGCTAGAGCCAGGAGACCTGCCTGTTCTAACAGCACTGCT
>BH0501(nrdA) Score=119.7 Pos=-351 [Bacillus halodurans C-125]
GTGTTTGTGGACGGTAAGGTGCCCGAAGCGGCTTAAAAGGGAATCTGGTGCAAATCCGGAGCTGTCCCCGCAACTGTGAGTGCTACGAACGGAACGATTTGCCACTGTACATCCTCTACTTCTTGAGAAATGTATGGGAAGGCTTCTAAGTAGGTAAAGCACGAGTCAGGAGACCTGCCTTACTTCCACAAGTTTCGCA
>BH0798(achX) Score=114.3 Pos=-384 [Bacillus halodurans C-125]
AGCACGCTCAAGCATTAGGTGGTTCAAACAATCGGTTGAATCTGAAAAGGGAAGCTGGTGAAAGTCCAGCACGGTCGCGCCACTGTAATAAGGAGCTACATGTGAGGAAACCACTGTCCAAAGGATGGGAAGGTACACATGGAGTGTTGATCTTAAGTCAGGAGACCTGCCTAATGTATGCACTTGCACCT
# RNA - PreQ1
>BH2244(queC) Score=49 Pos=-166 [Bacillus halodurans C-125]
TGTGAGAGAGGTTCGCGAACTCCCTCTATAAAAAACTAAGGCAAG
# RNA - Lysine
>BH3096(lysC) Score=116.4 Pos=-317 [Bacillus halodurans C-125]
AAGTGATGGTAGAGGTGCGAAAACCAAGAGTACACAGTCTGAGAGAAATGAGAATCGTTGACGACTGTTGGAAAGGGGGATTCGCCGAAGTGCAGATCGGGGCTCATTCCCATTTGCGCTGGACCTATGTTGAATAAGCATAGGGCTGTCACAACACTAGCCCCAACTAGTGCTGTGGAGAACTATCTCACGT
>BH3449(lysW) Score=127 Pos=-322 [Bacillus halodurans C-125]
AAGATGGGGTAGAGGAGCGGGTTTTAAGAGTAAGCGCTTGGAGGATGACAACGAGGATAAGCGCCGAAAGGAAAACTCGCCGAAGCGGAAGATGAGTCAAGCGTCTTCTTGCTGGGGTTGCATTGAATAAATGTAACACTGTCACAGCAGATTGCTGTGGAGAACTACTAACGTT
>BH1544(lysA) Score=121.7 Pos=-295 [Bacillus halodurans C-125]
GATGAGGTAGAGGTGCAATGCGAATCAGTACCCACTTGGAGTTTGATGGAACTAGGAAGAGTGGGGAAAGGTCAATTTGCCGAAGTGAATGTATGTCCATCCCATACGTTTGCTGGGTCGTTTTTGAATAAAAAACGAACTGCCGCTGACTGTTAGCGGAGAGCTATCTGCCAATG
>BH1742(dapA) Score=127.9 Pos=-355 [Bacillus halodurans C-125]
AAGTGAGGATAGAGGTGCAAAAACCAAGAGTACACAATTGGAGGAGAATGAGATCCGTTGAGAATTGTGGAAAGGGGAATTTGCCGAAGCTGGAAGAATCTCATGTTCTGAAGGCTGGTTCTGTATTAAATAAATACAGAACTGTCATATAGCGGATGTTGCTATATGGAGGGCTATCTCACGC
# RNA - Glycine
>BH2816(gcvT) Score=43.1 Pos=-327 [Bacillus halodurans C-125]
TCGACGCAGCTCTGGAGAGCGTCTAACACTAGACCACCTACGAAGACATTTCCTTTTTACGATAAGGGGAAAGAAACTTTCTGGTAACCGGACAGAGCTTTACAC
>BH2816(gcvT) Score=62.4 Pos=-417 [Bacillus halodurans C-125]
GATGAAAGCAAGGGGAGAGACTGCAAGGATGCAGCGCCGAAGGAGCAAACACAATTAGGGTGTGAATCTCTCAGGCAAAAAGACTCTTGCT
# RNA - Purine
>BH0746(guaD) Score=52.8 Pos=-183 [Bacillus halodurans C-125]
TAATCGAGCTCAACACTCTTCGTATATCCTCTCAATATGGGATGAGGGTCTCTACAGGTACCGTAAATACCTAGCTACGAAAAGAATGCAGTTAATGTG
>BH0607(guaA) Score=76.5 Pos=-240 [Bacillus halodurans C-125]
CATGTAGATATCATCCCTTTCGTATATACTTGGAGATAAGGTCCAGGAGTTTCTACCAGATCACCGTAAATGATCTGACTATGAAGGTGGAATGGCTCGATAT
>BH1514(xpt) Score=100.9 Pos=-206 [Bacillus halodurans C-125]
CATTTACATTAAAAAAAGCACTCGTATAATCGCGGGAATAGGGCCCGCAAGTTTCTACCAGGCTGCCGTAAACAGCCTGACTACGAGTGATACTTTGACATAG
>BH0608(pbuG) Score=94.6 Pos=-206 [Bacillus halodurans C-125]
ATAAATCGAAAACATCATTTCGTATAATGGCAGGAATAGGGCCTGCGAGTTTCTACCAAGCTACCGTAAATAGCTTGACTACGAAAATAATGGGTTTTTTACT
>BH0623(purE) Score=87.9 Pos=-248 [Bacillus halodurans C-125]
GTTCTTTATATAAAGTACCTCATATAATCTTGGGAATATGGCCCAAAAGTTTCTACCTGCTGACCGTAAATCGGCGGACTATGGGGAAAGATTTTGGATCTTC
# RNA - glmS
>BH0268(glmS) Score=125.8 Pos=-241 [Bacillus halodurans C-125]
TGACAGTTGAAGCGCCAGGACTATTCCACGGACGGTAACGGAATAGTTGACGAGGAGAGGGTTTATCGAAGGTTCGGCGGATGCCCTCCGGTTGCACATGACAGCCGCAAGCTTTTGTAAAAAACAGAGGGGCGACCTTCTGGACAAAGGCAAAAGCGTTCATGCTAAC
# RNA - GEMM_RNA_motif
>BH0563(BH0563) Score=46 Pos=-202 [Bacillus halodurans C-125]
CTTGAAAAAGGCGAGTGTTTGAAATGGAAAGACGCAAAGCTGCGAGTCTGAAATCCTTCTGAATAGGGATAGTCGAGTTGTCAAAAA
# RNA - PyrR
>BH2539(pyrB) Score=35.8 Pos=-223 [Bacillus halodurans C-125]
ATCGACCTTTAATGAAGGACAGAGAGCCTTCAAAGGCGTGACTTGTTTGAGAGAGGCAATCAGTAAAGCGAGGCCTTTCTCTACCTCTGCACGCCCGAAGCTGCACGATCGGGCGTGTTTTTTA
>BH2540(pyrP) Score=54.4 Pos=-142 [Bacillus halodurans C-125]
CCACCTCTTTAAATCAGTCCCGTGAGGCTGTTAAGAGGTACACTCTTTCTTGGGCACCTGTGTGCTTTTTTACAGGAGTAGTGTAACCTCTTTGTCATGGGCAAGGAGGTTTTTTGTT
>BH2541(pyrR) Score=67.6 Pos=-172 [Bacillus halodurans C-125]
AAGCTCCTTTAATGTTAGTCCAGTGAGGCTAAGAAGGAATCACGAAAACGCCGCTCGTCGTTTTCATGACTTTAGGTAACGTATACCCTTCTGCCCTTTGGACAGAAGGGTTTTTATA
# RNA - ykoK
>BH3225(sapB) Score=149.5 Pos=-318 [Bacillus halodurans C-125]
ACAACCACTTCGTTAGGTGAGGCTCCTGTATGGAGATATGCTGCTGCCCAAAAACGTCCAAAGACGCCAATGGGTCAACAGAAATCATCGACATAAGGTGATTTTTAATGTAGCTGGCAATGTCCTATGCCATACAGTGCTAAAGCTCTACGAATGAAGGGAATC
>BH1946(BH1946) Score=132.9 Pos=-365 [Bacillus halodurans C-125]
ATCATCCTCGTTAGGTGAGGCTCCTGTGCTGGAGATACGCTGCTGCCCAAAAACGTCCAAAGACGCCAATGGGTCAACAGAAACCATCGACATAAGGTGGTTTTTAACGTAGCTGGCTTCGTCCTATGCCGCACAGTGCTAAAGCTCTACGAATGGAGGAGTTTGGT
# RNA - ylbH
>BH2590(ylbH) Score=84.9 Pos=-313 [Bacillus halodurans C-125]
AATAAAAAAATCCCCGTAAGAATTGATCTTACGGGGTGCCCGTGATCATACGTTCTGTATGTACGAGGCTATGGGAGAGGAGAAACCGGAGGAAGAACTTATGGGGAAACGTAAGCCTTCTCCGCGG
# RNA - yybP-ykoY
>BH2553(ykoY) Score=74.3 Pos=-225 [Bacillus halodurans C-125]
ACATAGCTTTTAAGGGGAGTAGCTAATTACAATAAAGTCGTCATGACAGGGATCTCCCATAAATCCCTCGGCTTTATTGGCAACGGATATACGGTTGTTAGCAAGACCTTTACCAAATGG
# RNA - ydaO-yuaA
>BH0597(ktrA) Score=103.1 Pos=-223 [Bacillus halodurans C-125]
ACCTTTAATCGCTGAATCTCTATTGAGAGCGGGGGAACCATACCTGACAGAGTTGTTTCTGTCTTGGGGTGAATCTTATGTTTTTTATAAGAAGGGATACTCTCCATCCCTAATCCGACAGCTAACCTCGTAAGCGTTGATTCGAGAGAGGGT
# RNA - ykkC-yxkD
>BH0686(ykkC) Score=94.8 Pos=-155 [Bacillus halodurans C-125]
GCCAAATGTTTTCTAGGGTTCCGCTTGCAAGGCAAGGCCTGGTCCGAGAGAAAACGCAAAAAAGATTGTCTTTTTTGTCCACGGAGGGAGAAAAGCCCGGGAGAT
# RNA - L10_leader
>BH0121(rplJ) Score=83.6 Pos=-178 [Bacillus halodurans C-125]
ACAGGCGTTGAAACATACCGTAGACAGTAGGTGCGTGATTCGCTTAATTTCCTACCGAGGTAAGCAAATAGATGAAAGTCTTTTGACTGGACTCGTATGCCCTCATGTCTGCATGGGGGCATTTTCGTTGGCCTCTT
# RNA - L19_leader
>BH2478(rplS) Score=46.4 Pos=-66 [Bacillus halodurans C-125]
TACGATGTTCCGCTGCAGGGGTAGAAGCTGTCATGAGCATCTG
# RNA - L20_leader
>BH3140(infC) Score=74.5 Pos=-156 [Bacillus halodurans C-125]
TCAAAGCAAGAAGGAGCGCCCGCTTCTCACCTGATCGACGCACAGCGCAGTTGACAGGTCTACATGTAATAATGTCTCATGATGACAAACATGAGTGTGGGCGTCGTATGCCCACACTCTTTTGTGTTG
# RNA - L21_leader
>BH3011(rplU) Score=64.1 Pos=-86 [Bacillus halodurans C-125]
CCAATGACTACAACCGCACAGACTAGGTTTATAAATGGATCTCCCTACCTAGAATGGCGAGTCTGAGTATATGA
# RNA - T-box(Ala)
>BH1267(alaS) Score=82.8 Pos=-295 [Bacillus halodurans C-125]
GTAATACGTTGATGGAACGAGTACGTTGCAGACCATCCAAAAACGCCTACATAGCTAGTGCGTAATCAGAGAGGTTGTTCCTTGGCTGAAAGAACAACTGGATGAAGGGTAACGGAAGGCTACTCCGAAGTGCAGGAAAACCCTGCCGTTTGCTGCGTTAAGGCTTAAAGTGATGGACCTATGTCCATAATTAGGGTGGTACCGCGTGACTTCAGCTCTCGTCCCTTCATA
# RNA - T-box(Arg)
>BH0834(argS) Score=114.7 Pos=-255 [Bacillus halodurans C-125]
GAACGTTAAAGATTGGGAGAGTACTTTTACCGAAAGTCATAAAAGCGAGTCGGGATGGTGGGAGCCGATTGGACTGGTGAAAGGAAACGCACCCATGAAATGGCCTGTTGAATAAAAGTAGACAGGTCCGGTTTGTCACCGTTATGTGCATCAAGTGACTCACAAATGAGTAACGAGAGTGGTACCGCGGGTAAAAGCTCGCCTCTTTTTA
# RNA - T-box(Asn)
>BH1251(hisS) Score=137.9 Pos=-367 [Bacillus halodurans C-125]
GGTTTCCGATGAAGAGGAAAAGTAATTAAGATCTGTTTTCAAAGAGAGGAAGGTCAGCGGCTGAAAGCCTTCTAAAACAGCCTTAATGAATGAACACCTTTGAGGAGTCTTTCTGAACGCAATCGTTAGTAGGAGAGAACGTAGGCAGGCGTTATCTGCATTTGAGTGGAAGCATGTCATATCATGCTTCAATTAGGGTGGCACCACGGGAATCAACTCTCGTCCCTGATGG
# RNA - T-box(Cys)
>BH0110(cysE) Score=103.9 Pos=-312 [Bacillus halodurans C-125]
AAAGCGCGTTGAAGAGGAAAAGTAGGATGAACGGTAACGGACAGAGAGAGCTGTCTCGGCTGAAAGCAGCTTACGTTCACCCCATCTGAACATGCACCTCTGAGCCCTTGATTGAACGGAAGGTATACTTCATTAGTAGGTCAAGGCGGCTTGCACCGTTATTGCAGAATTGAGAGGGGAAATGGCAAATCGACCATTTCTCAAGCAGAGTGGGACCACGTGAAGAGCGTCTCTGTGCA
# RNA - T-box(Gly)
>BH1370(glyQ) Score=100.6 Pos=-326 [Bacillus halodurans C-125]
TCAATGCTATGACGGAGAACAGTACTTGATTCCTTTTACATAAAAGCGAACCTAGGATGGTGAGAGCTAGGGATGTAAACATCAAGGAAGGCACTCTTGAGCATGAACGATGAAAAGAAAGTGGCCTATGGTGTCATCATAGGCAAATAGGGTGGAACCGCGGGTTAACTCTCGTCCCTATGCC
# RNA - T-box(Ile)
>BH2545(ileS) Score=104.6 Pos=-330 [Bacillus halodurans C-125]
ACAATGGACGATGAGAGGGACAGTACACGTCACCCCTTCCAAAAGCGAGTCAGGGATGGTGGAAGCCTGATGGAACGTGAATGTGGAAAATCACCCTTTAGTTTTTGCACCGAACGATCGTTGATTCAGTAGGCTGCAACAGGTCATGCCTGTTAACAATGACACGAGGGAACAAGCAAAGAATGTCGTTTGTTCACTAGGGTGGTACCGCGGGAATACCTTCTCGTCCCTAAT
# RNA - T-box(Leu)
>BH3281(leuS) Score=116.6 Pos=-391 [Bacillus halodurans C-125]
TGAAAAAACAGTGACGAGGAGTAGTAGTGGGCCCCTGCTTGCGCCTAGAGAATTGACGGTTGGTGGAAGTCAATCGCAGCAGCCATGAACTCGCCTTGAAGTTGCATTGGTGAACAGGAAGTAGCCAATGACGTTGCCCGCGTTAAGGGACACGAGTGAGCCTTTAAAGGAGCAAGGTTAACGAGGGTGGTACCGCGGGTCGTTTGTTATACAAACCTCTCGTCCCTTTT
>BH3061(ilvB) Score=115.7 Pos=-362 [Bacillus halodurans C-125]
TTTTAACACGTTGAAGAGGATCAGTAATTAAAGGCGATCATCTACAGAGAGCTGCTAGGAGCTGAGAGGCAGCGATGATCCTTTAATGAAGCTCACCTCGGAGTGCGACTTCGAACAATCGGGCACAGCCTGCTTTAGTAGATGTTGCCGGGTGGTTTTTCACTACACCCGTTATCAAAATGAGACGATTTGATCGTCCATGAGGTAGCATTTGTAAAAATGCTACGAATGAGGGTGGTACCGTGAAAAGAGAAATCTTTTTGCCCCTTTG
# RNA - T-box(Lys)
>BH0807(lysX) Score=108.2 Pos=-331 [Bacillus halodurans C-125]
CTAACACGCGATGAAGAGAAGAGTACATACATCCCTTTCCTCACAGAAAGCCTGTAGTTGCTGAGAACGGGTAGGAGAGCTGTATGGAAGCAAGACTCTGAGCGGCACATCGGAACAACCCTACGCCGGCCGGCAAGCATTTAATCCAAAGGTTGGGATGGTGTGACAGGAGCTCCTGTTATTGAGCAATGTATAGGCTCACTATACACATGAGGTTCATATCGTGATATATGGACGAACTGGGGTGGCACCACGACAAGTGATCGTCCCCAAG
# RNA - T-box(Met)
>BH0053(metS) Score=73.4 Pos=-346 [Bacillus halodurans C-125]
GAGTCCTGATGAAGGGATGAGTACAGCTGATTGACCTATTTGCGTCATGCTAAGCAGAGAGCCGGGGGAGCTGGGAACCGGTATAGGGGGCAGCTGGAAGATGGTCCTGGGAGGGTTTTCTTTCGAGTGTTGCTTTTAAACATGAGGGAGGAACGTAGCTGGCGTTAACAGAGAAGTCAACGTGACTTCATGAGCCAATCATTGTGAAGTGATTGGAAAACATGGGTGGTACCGCGTGAGCACTAGGCTCTCGTCCCAATGGG
# RNA - T-box(Phe)
>BH3111(pheS) Score=103.7 Pos=-368 [Bacillus halodurans C-125]
TGAAAATGCGTGGAAAGAGAGTAGTAAGCTGAACCCTACCAACCAGGGACGAGATGCCAGCGACTGAAAGCACCTCGATGGAAAGGACAGCTGAATTCGCTCTGGAGCAGGCACTGGAACACAAGCGCATAGCTTGTTAAGGTGATCCCGGCAACAGCCGTTATGGAAATGAAGAGGATGCACTCAGTTTGTGCATCAATTAGGGTGGTATCGCGAAACCTTCGTCCCTTGT
# RNA - T-box(Pro)
>BH1505(proB) Score=92.4 Pos=-255 [Bacillus halodurans C-125]
ATTGCAGGCAATGAGAGGGATTAGTAAGCATCCATTCATGCAGTCAGAGAGCGGGACCCACAGGCTGAAAGGACCGTTGCCTCTGAATGTGCTGAACCTACCCTTGAGCTACCAGTGAAAAGCTGGACGTGTCTCGCGTTATGAGAGTAGAGTGGGCAATTATGCCAACAAAAGGTGGTACCGCGGATATCCAACCTCCGTCCTTTTT
# RNA - T-box(Ser)
>BH0024(serS) Score=139.4 Pos=-269 [Bacillus halodurans C-125]
ACAATGCGTTGAGAGGAACTAGTAATAGGAATACTTCTGTTCAGAGAGCTAGTGGACGGTGCGAACTAGCCAGAGGTGCCTATGAATCCATCCTTGAGTGGAATGCTGAACATAAGTAGGCGTTTCCGGTTCTGGCCGTTATCCAGATGAGTGGTCAGCGGTATAGCTGGCAACAAGGGTGGCAACGCGGGTGCTCTCGTCCCTTTTCT
>BH1602(serA) Score=107.6 Pos=-397 [Bacillus halodurans C-125]
CTTAAAAACGATGACGAAGATGAGGAATGTAGATGACCAATCCAGAGAGCTGGTGGTTGCTGTGAACCAGCTTGGCTCTACAATTTCCGTAGCCCTTCTGAGTTGACGCTCTGAACATTTAAGTAGGAGCGCTCCGGTTAATCCGTTACCTTGGAGACGTAGTTAAATCTCCTTGAGGCACATACTGCGACAACAAGTATGTGTGAATGAGGGTGGCACCGCGGTATGAACCTTCCGCCCCTCAC
# RNA - T-box(Thr)
>BH3141(thrS) Score=108.4 Pos=-304 [Bacillus halodurans C-125]
TTAAATGGTTATGATGAGGACATGGGTTCCATGGACGGTTTTTAGAGAGGGGAGGGTTGGTGCAACTCCCTAACTCGAAATGGTAACTTACCACCTCTGAACTGCAGCAGGGAACGATGGTCTAAGTATCTGCTGCCGGCATAAATGTCGTTATGAACAATCTTGAGCTGCAAAACGGGAATGCTTTTCGTTTTGTAGGAACAAGGGTGGAACCACGAGTAACACTCGTCCCTTTT
# RNA - T-box(Trp)
>BH2200(trpS) Score=119.9 Pos=-404 [Bacillus halodurans C-125]
TATGTTTGCAATGATGAAGAAGAGTATGAATCGTATCCTGTTCTAGAGAGCTGATGGTCGGTGGAAATCAGTACAGAAACGATGCAGAATGGGCTTCGGAGCATCCAAACCGAACGGGAATGGATCCTTAGTAGGCTTTGGCGATAGGTCTCGTCGTTACATGAGACACTTGTTCTCGAGTTGTGATGACAAGGAAGCAGGGTTATTTATTGACCAATGAAGGTGGTACCGCGGGCTCTCCCGTCCTTTTC
# RNA - T-box(Tyr)
>BH3228(tyrZ) Score=117.2 Pos=-282 [Bacillus halodurans C-125]
ATATTGAGCGTTGAAGAGTGACAGTAGCGAACGTCTCCCTGTAAAAAGAGAGCTGGTGGTTGGTGCAAATCAGTACAAAGGCGACTCGTGAAGTACAGCTTGGAGCTTTTTCTTTGCTATTTTGGTGAAGAAACGGGGCATGCCGTTATCATGTTGGAGTTGGGAGAAATGCTACTATTTCTCCAAAAAGGGTGGTACCGCGAGTAAGCTCGTCCCTTAT
# RNA - T-box(Val)
>BH3038(valS) Score=121.2 Pos=-287 [Bacillus halodurans C-125]
GTTAAATGCACAGATAGGGAAGAGTAGCTTCCGAACCCTTTTCAGAGAGAGGAATCCATTGGCTGGGAGGTTCCTTAGGATGTACGAGGTGAAGGTCGCCCTGGAGCAGCTTTACTGAACACAAGTAAGTAAGGTCGGCGAAAAGCCGTTATCATGTCGAGTGTGCCAATGGTGATGATTCCATAGGCAAACAAAGGTGGTACCGCGAGTAAACTCTCTTCGTCCTTTGA
# TF - MalR
>BH3327(yflS) Score=7.7 Pos=-46 [Bacillus halodurans C-125]
CTACTTTTTTT------TTAGGTTAATC
>BH3327(yflS) Score=7.4 Pos=-63 [Bacillus halodurans C-125]
TTGCTCTTTTA------CTACTTTTTTT
# TF - GlnL: BH2715
>BH2717(glsA1) Score=6.6 Pos=-77 [Bacillus halodurans C-125]
TTCTGT----TTCTGT
# TF - GamR: BH0914
>BH0913(BH0913) Score=4.6 Pos=-60 [Bacillus halodurans C-125]
TTATACGTAATGACAATTTT
>BH0916(chiA) Score=5.6 Pos=-92 [Bacillus halodurans C-125]
ATATTTGTTATTACATTTAT
>BH0916(chiA) Score=4.7 Pos=-68 [Bacillus halodurans C-125]
ATTTTAGTAGTAACTTTTAT
>BH0916(chiA) Score=5.2 Pos=-44 [Bacillus halodurans C-125]
AATATTGTTACTACAAATAA
>BH0912(licH) Score=5.6 Pos=-74 [Bacillus halodurans C-125]
TGATTAGTAGTAACAAATAT
>BH0913(BH0913) Score=4.8 Pos=-92 [Bacillus halodurans C-125]
TTAATTGTAGTTACTTATTT
>BH0913(BH0913) Score=5.6 Pos=-116 [Bacillus halodurans C-125]
ATATTTGTTACTACTAATCA
# TF - UxuR: BH1062
>BH1064(BH1064) Score=6.1 Pos=-186 [Bacillus halodurans C-125]
CTACCATACTAGTATGATTA
>BH1063(uxuA) Score=5.6 Pos=-45 [Bacillus halodurans C-125]
TATGTATACTAGTATGGTTA
# TF - LiaR: BH1200
>BH1195(liaI) Score=5.3 Pos=-98 [Bacillus halodurans C-125]
CTCAGACTCAAGGCGGAG
# TF - YvcP: BH0755
>BH0753(yvcR) Score=6.6 Pos=-94 [Bacillus halodurans C-125]
TGACAAC--TGTCACC
# TF - KojR: BH3692
>BH3692(kojR) Score=7 Pos=-26 [Bacillus halodurans C-125]
CAACCGAAACGTTTTGGAGG
>BH3691(gdb1) Score=7 Pos=-153 [Bacillus halodurans C-125]
AAACCGAAACGTTTTGGATT
>BH3691(gdb1) Score=5.5 Pos=-55 [Bacillus halodurans C-125]
GATCCAAAACGTTTCGGATG
# TF - MalR2: BH2923
>BH2903(BH2903) Score=5.4 Pos=-32 [Bacillus halodurans C-125]
TTACGTAAACGTTTTCGTTA
>BH0413(BH0413) Score=6.3 Pos=-41 [Bacillus halodurans C-125]
TTGTGCAAACGTTTGCCTAA
>BH2926(malE) Score=6.2 Pos=-87 [Bacillus halodurans C-125]
TTGTGCAAACGATTTCCTAA
>BH2927(nplT) Score=6.1 Pos=-254 [Bacillus halodurans C-125]
TTAGGAAATCGTTTGCACAA
# TF - BH1250: BH1250
>BH1244(BH1244) Score=5.6 Pos=-102 [Bacillus halodurans C-125]
ATATGAGAACGATTCCATAG
>BH1244(BH1244) Score=5.3 Pos=-32 [Bacillus halodurans C-125]
ATGTGAAATCGATTCCATAT
>BH2903(BH2903) Score=4.7 Pos=-32 [Bacillus halodurans C-125]
TTACGTAAACGTTTTCGTTA
# TF - ScrR2: BH1855
>BH1856(scrA) Score=6.1 Pos=-97 [Bacillus halodurans C-125]
GAATGGAACCGGTTCCTAAA
>BH1856(scrA) Score=7 Pos=-48 [Bacillus halodurans C-125]
TTGTGGAACCGGTTCCTAAA
# TF - BH1516: BH1516
>BH1516(BH1516) Score=6 Pos=-34 [Bacillus halodurans C-125]
CACAGAAAACGTTTTCGTTT
>BH0413(amyA) Score=6.5 Pos=-104 [Bacillus halodurans C-125]
AAAAGTAAACGTTTTCTTTT
>BH2903(malL) Score=5.9 Pos=-113 [Bacillus halodurans C-125]
TCACGTAAACGTTTTCTCTC
>BH2903(malL) Score=6.3 Pos=-32 [Bacillus halodurans C-125]
TTACGTAAACGTTTTCGTTA
# TF - ABC3918: BH1164
>BH1163(ABC3919) Score=7.3 Pos=-49 [Bacillus halodurans C-125]
TATACTGTGTATATAGATATTAACACATAA
# TF - BC2903: BH3492
>BH3492(BC2903) Score=7.2 Pos=-39 [Bacillus halodurans C-125]
TATGGTTAGTTACATAAGTAATGAACCAAG
# TF - BH0651: BH0651
>BH0651(BH0651) Score=8.7 Pos=-157 [Bacillus halodurans C-125]
TGTATATAATGTATATATAGTATATATACATTATATAAA
# TF - YhcF2: BH2647
>BH2647(yhcF2) Score=5.7 Pos=-105 [Bacillus halodurans C-125]
CTGTATGAACCATATAATACAC
>BH2647(yhcF2) Score=6.3 Pos=-78 [Bacillus halodurans C-125]
CTGTATTAAAGGATTAATACGC
>BH2647(yhcF2) Score=6.5 Pos=-42 [Bacillus halodurans C-125]
ATGTATTAAGTTGTTAATACAC
# TF - PdxW: BH0578
>BH0577(pdxO) Score=8.2 Pos=-96 [Bacillus halodurans C-125]
CTGACC-(18)-TTGTCC-(10)-GGTCAA
# TF - BH1940: BH1940
>BH1939(putA) Score=13 Pos=-95 [Bacillus halodurans C-125]
GAAAGTGGCTC-(14)-GAAAGTGGCTC-(6)-AATCCATTTTA
>BH0390(BH0390) Score=12.2 Pos=-142 [Bacillus halodurans C-125]
ATAATTGGTAC-(14)-ATAAGTGGTAC-(6)-CAACCAGTTCC