# TF - CymR: RBAM_024630
>RBAM_024380(yrrT) Score=5.9 Pos=-49 [Bacillus amyloliquefaciens FZB42]
TAATCCATACTATACTCATAGGAATTA
>RBAM_000840(cysK) Score=5.8 Pos=-39 [Bacillus amyloliquefaciens FZB42]
TAATACCAATAAATTTAGTCGGAAATT
>RBAM_003900(yxeK) Score=6 Pos=-85 [Bacillus amyloliquefaciens FZB42]
TTATTCTTATAAAATTACTAGGAAATA
>RBAM_030850(ytmI) Score=5.3 Pos=-54 [Bacillus amyloliquefaciens FZB42]
CAAAGCTTAGTAAACAAATTGGAATTA
>RBAM_004850(ydbM) Score=6 Pos=-82 [Bacillus amyloliquefaciens FZB42]
TAATACTTATTAACTTTATCGGAATTA
>RBAM_015400(cysH) Score=4.7 Pos=-299 [Bacillus amyloliquefaciens FZB42]
TTATTCCTATCAAAAAACTCGGGTTGA
>RBAM_030860(ytlI) Score=5.3 Pos=-100 [Bacillus amyloliquefaciens FZB42]
TAATTCCAATTTGTTTACTAAGCTTTG
# TF - NsrR : RBAM_009640
>RBAM_028210(hmp) Score=6.7 Pos=-92 [Bacillus amyloliquefaciens FZB42]
TAAAGATTCATTTTAAATATATCTTTT
>RBAM_028210(hmp) Score=7.3 Pos=-45 [Bacillus amyloliquefaciens FZB42]
TAAAGATATATTGAAAATACATCTTTA
>RBAM_003510(nasD) Score=5.8 Pos=-73 [Bacillus amyloliquefaciens FZB42]
ATAACATGCACCTTAAATATTTGTTTT
# TF - Zur: RBAM_023410
>RBAM_003550(yciC) Score=5.7 Pos=-38 [Bacillus amyloliquefaciens FZB42]
TAAATCGTAATCATTCTATTTTG
>RBAM_003550(yciC) Score=6.6 Pos=-103 [Bacillus amyloliquefaciens FZB42]
TAAATAGTAACGATTACGATTTA
>RBAM_009150(rpsN2) Score=6.7 Pos=-37 [Bacillus amyloliquefaciens FZB42]
CAAAACGTAATTATTACGATTTG
>RBAM_022140(rpmGA1) Score=6.8 Pos=-40 [Bacillus amyloliquefaciens FZB42]
TAAAACGTAATAATTACGATTTG
>RBAM_027710(rpmE2) Score=6.8 Pos=-39 [Bacillus amyloliquefaciens FZB42]
TAAAACGTAATTATTACGATTTG
>RBAM_003110(adcA) Score=5.5 Pos=-42 [Bacillus amyloliquefaciens FZB42]
GAAATCGTCATCATTCTGATTTA
>RBAM_003110(adcA) Score=5.8 Pos=-105 [Bacillus amyloliquefaciens FZB42]
CAAAACGTAATTACTTCGTTTTA
# TF - YtrA: RBAM_027400
>RBAM_027400(ytrA) Score=6.7 Pos=-238 [Bacillus amyloliquefaciens FZB42]
TGTACTACTTGATGTAATACA
# TF - XylR: RBAM_017340
>RBAM_017320(xynP) Score=6.4 Pos=-304 [Bacillus amyloliquefaciens FZB42]
AGTTAGTTTGTTCGGTCAACAAACT
>RBAM_017340(xylR) Score=6.1 Pos=-187 [Bacillus amyloliquefaciens FZB42]
AGTTTGTTGCCCAAACAAACTAACT
>RBAM_017350(xylA) Score=6.1 Pos=-101 [Bacillus amyloliquefaciens FZB42]
AGTTAGTTTGTTTGGGCAACAAACT
# TF - TreR: RBAM_007990
>RBAM_007970(treP) Score=6.8 Pos=-56 [Bacillus amyloliquefaciens FZB42]
AAACATGTATATACAAGTTT
>RBAM_007970(treP) Score=5.2 Pos=-89 [Bacillus amyloliquefaciens FZB42]
CGACATGTATATACATCATT
# TF - Rex: RBAM_006420
>RBAM_012360(yjlC) Score=6 Pos=-110 [Bacillus amyloliquefaciens FZB42]
ATTGTGCATGAATTCACAAT
>RBAM_004810(ydbI) Score=5.1 Pos=-73 [Bacillus amyloliquefaciens FZB42]
TTTGTTATATAATTTACAAT
>RBAM_003290(ldh) Score=5.6 Pos=-59 [Bacillus amyloliquefaciens FZB42]
AATGTGAAATACTTCACAAG
>RBAM_003290(ldh) Score=6.3 Pos=-82 [Bacillus amyloliquefaciens FZB42]
TTTGTGAAGTATTGCACAAT
>RBAM_036010(cydA) Score=5.5 Pos=-44 [Bacillus amyloliquefaciens FZB42]
TTTGTGAAATGTTGAGCAAT
>RBAM_036010(cydA) Score=5 Pos=-76 [Bacillus amyloliquefaciens FZB42]
TTTGTGAAATACCGAGCAAT
>RBAM_036010(cydA) Score=5.5 Pos=-106 [Bacillus amyloliquefaciens FZB42]
TTTGTGAAACATTGAGCAAA
# TF - PerR: RBAM_008820
>RBAM_024240(yybE) Score=5.1 Pos=-57 [Bacillus amyloliquefaciens FZB42]
TTATAATAACTATAG
>RBAM_013620(zosA) Score=5.3 Pos=-154 [Bacillus amyloliquefaciens FZB42]
TTAAAACAATTATAA
>RBAM_013620(zosA) Score=4.8 Pos=-177 [Bacillus amyloliquefaciens FZB42]
TGATAATTATTATCA
>RBAM_009770(plsC) Score=4.2 Pos=-87 [Bacillus amyloliquefaciens FZB42]
ATATAATTATTAGTA
>RBAM_009770(plsC) Score=4.1 Pos=-171 [Bacillus amyloliquefaciens FZB42]
TTAAATTCATTTTCA
>RBAM_011500(spxA) Score=4.5 Pos=-64 [Bacillus amyloliquefaciens FZB42]
TTAAAGTCATTTCAA
>RBAM_011500(spxA) Score=4.3 Pos=-90 [Bacillus amyloliquefaciens FZB42]
GTATAATACCTATAA
>RBAM_008820(perR) Score=4.4 Pos=-34 [Bacillus amyloliquefaciens FZB42]
TAATAATCTTTTTTA
>RBAM_008820(perR) Score=5.4 Pos=-51 [Bacillus amyloliquefaciens FZB42]
TTATAAACATTATAA
>RBAM_030100(mrgA) Score=6 Pos=-76 [Bacillus amyloliquefaciens FZB42]
TTATAATTATTATAA
>RBAM_009090(katA) Score=5.9 Pos=-78 [Bacillus amyloliquefaciens FZB42]
TTATAATCATTATAA
>RBAM_025230(hemA) Score=5.5 Pos=-39 [Bacillus amyloliquefaciens FZB42]
TTAGAATGATTATAA
>RBAM_025230(hemA) Score=5.9 Pos=-69 [Bacillus amyloliquefaciens FZB42]
TTATAATCATTATAA
>RBAM_021640(fur) Score=5.6 Pos=-76 [Bacillus amyloliquefaciens FZB42]
TTATAATAATTATAG
>RBAM_021640(fur) Score=5 Pos=-116 [Bacillus amyloliquefaciens FZB42]
TTAGAATGATTATCA
>RBAM_036960(ahpC) Score=4.9 Pos=-79 [Bacillus amyloliquefaciens FZB42]
TTAGAATTATTATTG
# TF - NiaR: RBAM_024940
>RBAM_003210(niaP) Score=5 Pos=-61 [Bacillus amyloliquefaciens FZB42]
ACAATGTGTAAAGACAGGTGTA
>RBAM_024930(nifS) Score=6.5 Pos=-84 [Bacillus amyloliquefaciens FZB42]
TACACCTGTCTTGACACCTATA
>RBAM_024920(nadB) Score=6.5 Pos=-43 [Bacillus amyloliquefaciens FZB42]
TATAGGTGTCAAGACAGGTGTA
# TF - MtlR: RBAM_004390
>RBAM_004390(mtlR) Score=7.6 Pos=-147 [Bacillus amyloliquefaciens FZB42]
CTGTCACA-----AGTGCCAA
>RBAM_004230(mtlA) Score=7.6 Pos=-146 [Bacillus amyloliquefaciens FZB42]
TTGTCACA-----TGTGCCAA
# TF - MntR: RBAM_022840
>RBAM_004660(mntH) Score=5.7 Pos=-65 [Bacillus amyloliquefaciens FZB42]
TAATTTGCATCTAGGAAACTTT
# TF - ManR: RBAM_024210
>RBAM_024210(manR) Score=7.4 Pos=-139 [Bacillus amyloliquefaciens FZB42]
TTTTTCCGGAACCTGCGGTAAAA
>RBAM_024200(manP) Score=7.7 Pos=-101 [Bacillus amyloliquefaciens FZB42]
TATTTCCGGAACTTATGGTAAAA
# TF - LicR: RBAM_035800
>RBAM_035790(licB) Score=6.2 Pos=-109 [Bacillus amyloliquefaciens FZB42]
TTTTCCGTTAACAGCGGAAAA
# TF - LexA: RBAM_017650
>RBAM_021830(yqjW) Score=4.3 Pos=-28 [Bacillus amyloliquefaciens FZB42]
CAGAACAAATGTTCCC
>RBAM_022900(yqhH) Score=4.1 Pos=-243 [Bacillus amyloliquefaciens FZB42]
TCGAGCAAGAGTTCTT
>RBAM_021430(ypuD) Score=4.7 Pos=-177 [Bacillus amyloliquefaciens FZB42]
CAGAACATAAATTCGT
>RBAM_017670(yneB) Score=4.1 Pos=-359 [Bacillus amyloliquefaciens FZB42]
GCGAACAAACATTCTT
>RBAM_017670(yneB) Score=4.4 Pos=-396 [Bacillus amyloliquefaciens FZB42]
AGAAACGTTTGTTCGT
>RBAM_017670(yneB) Score=5.1 Pos=-426 [Bacillus amyloliquefaciens FZB42]
ACAAACATAGGTTCGA
>RBAM_013560(ykvR) Score=4.2 Pos=-111 [Bacillus amyloliquefaciens FZB42]
GGGAACGTATGTTTGT
>RBAM_010690(yhjD) Score=4.7 Pos=-40 [Bacillus amyloliquefaciens FZB42]
AAGAACAAAGGTTCTC
>RBAM_025550(uvrC) Score=5.2 Pos=-62 [Bacillus amyloliquefaciens FZB42]
AAAAACAAATGTTCGT
>RBAM_032310(uvrB) Score=5 Pos=-90 [Bacillus amyloliquefaciens FZB42]
TCGAACTTTAGTTCGT
>RBAM_023990(sda) Score=4.4 Pos=-144 [Bacillus amyloliquefaciens FZB42]
CAGAACGATTGTTCTT
>RBAM_016780(recA) Score=4.7 Pos=-86 [Bacillus amyloliquefaciens FZB42]
CCGAATATGCGTTCGC
>RBAM_017900(parE) Score=4.3 Pos=-243 [Bacillus amyloliquefaciens FZB42]
GCGAACTCATGTTCTT
>RBAM_017650(lexA) Score=5.1 Pos=-73 [Bacillus amyloliquefaciens FZB42]
TCGAACCTATGTTTGT
>RBAM_017650(lexA) Score=4.4 Pos=-103 [Bacillus amyloliquefaciens FZB42]
ACGAACAAACGTTTCT
>RBAM_017650(lexA) Score=4.5 Pos=-140 [Bacillus amyloliquefaciens FZB42]
AAGAATGTTTGTTCGC
>RBAM_020950(hupA) Score=4.5 Pos=-282 [Bacillus amyloliquefaciens FZB42]
AGGAATATTTGTTCGG
>RBAM_026280(dnaE) Score=4.5 Pos=-69 [Bacillus amyloliquefaciens FZB42]
AAGAACATTTGTTTCT
>RBAM_037680(dinB) Score=4.1 Pos=-38 [Bacillus amyloliquefaciens FZB42]
AGGAACGTACGTTCTG
>RBAM_017070(aprX) Score=4.5 Pos=-146 [Bacillus amyloliquefaciens FZB42]
ACGAACAAAAGTTCCA
>RBAM_012500(xkdA) Score=5.4 Pos=-30 [Bacillus amyloliquefaciens FZB42]
AAGAACATATGTTCGA
>RBAM_010150(yhaO) Score=3.9 Pos=-70 [Bacillus amyloliquefaciens FZB42]
CAGAACGTGCATTCGT
>RBAM_026290(ytrH) Score=4.7 Pos=-80 [Bacillus amyloliquefaciens FZB42]
AGAAACAAATGTTCTT
>RBAM_010700(yhjE) Score=4.4 Pos=-128 [Bacillus amyloliquefaciens FZB42]
GAGAACCTTTGTTCTT
>RBAM_007010(pcrA) Score=5.2 Pos=-32 [Bacillus amyloliquefaciens FZB42]
TAGAACATATGTTTGA
# TF - HrcA: RBAM_023790
>RBAM_023790(hrcA) Score=7.3 Pos=-41 [Bacillus amyloliquefaciens FZB42]
TTAGCACTCGCTGACCTTGAGTGCTAA
>RBAM_006470(groES) Score=7.4 Pos=-62 [Bacillus amyloliquefaciens FZB42]
TTAGCACTCTTTAGAGCTGAGTGCTAA
# TF - GlvR: RBAM_008370
>RBAM_008360(glvA) Score=7.7 Pos=-129 [Bacillus amyloliquefaciens FZB42]
GGGAACTTTCCCGCTTTTTGAGAAAAA
# TF - Fur: RBAM_021640
>RBAM_036560(yxeB) Score=6.5 Pos=-36 [Bacillus amyloliquefaciens FZB42]
AATGATAATCATTATCACT
>RBAM_034370(ywjA) Score=5.7 Pos=-47 [Bacillus amyloliquefaciens FZB42]
ATTGAGAAATATTATCATT
>RBAM_030060(yusV) Score=5.5 Pos=-124 [Bacillus amyloliquefaciens FZB42]
ATTGATAATGATATTCAGA
>RBAM_029160(yumC) Score=5.2 Pos=-35 [Bacillus amyloliquefaciens FZB42]
ATTAATAACAATTTTCAAT
>RBAM_016850(miaB) Score=5.3 Pos=-111 [Bacillus amyloliquefaciens FZB42]
ATTGATTCTTATTCTCAAT
>RBAM_013920(ykuN) Score=6.5 Pos=-33 [Bacillus amyloliquefaciens FZB42]
AATGAAAATCATTATCAAT
>RBAM_013920(ykuN) Score=6.5 Pos=-70 [Bacillus amyloliquefaciens FZB42]
AATGAAAATCATTATCATT
>RBAM_010510(yhfQ) Score=6.4 Pos=-72 [Bacillus amyloliquefaciens FZB42]
AATGATAATGAATATCATT
>RBAM_008550(yfhC) Score=6.5 Pos=-40 [Bacillus amyloliquefaciens FZB42]
AATGATAATCATTTTCATT
>RBAM_004050(yclN) Score=5.9 Pos=-87 [Bacillus amyloliquefaciens FZB42]
GTTGATAATGATAATCATT
>RBAM_003480(ycgT) Score=6.1 Pos=-60 [Bacillus amyloliquefaciens FZB42]
ATTGATATTGATTCTCAAT
>RBAM_002130(btr) Score=5.6 Pos=-50 [Bacillus amyloliquefaciens FZB42]
AATGATAACAGTTATCATT
>RBAM_021640(fur) Score=4.8 Pos=-118 [Bacillus amyloliquefaciens FZB42]
TTTTAGAATGATTATCACA
>RBAM_030440(fhuD) Score=5.5 Pos=-51 [Bacillus amyloliquefaciens FZB42]
ACTGATAATGATTCTCTTT
>RBAM_030440(fhuD) Score=6.7 Pos=-187 [Bacillus amyloliquefaciens FZB42]
AATGATAATGATTATCAAT
>RBAM_030430(fhuB) Score=6.7 Pos=-49 [Bacillus amyloliquefaciens FZB42]
ATTGATAATCATTATCATT
>RBAM_030430(fhuB) Score=5.5 Pos=-185 [Bacillus amyloliquefaciens FZB42]
AAAGAGAATCATTATCAGT
>RBAM_002120(feuA) Score=6.1 Pos=-38 [Bacillus amyloliquefaciens FZB42]
ATTGATAATAGTTATCAAT
>RBAM_029060(besA) Score=6.5 Pos=-61 [Bacillus amyloliquefaciens FZB42]
ATTGAAAATCATTATCAAT
>RBAM_021190(fer) Score=5.2 Pos=-141 [Bacillus amyloliquefaciens FZB42]
TGTGATAAGCATTCTCAAT
>RBAM_020180(ypbR) Score=5.8 Pos=-314 [Bacillus amyloliquefaciens FZB42]
TATGAAAATGATTCTCATT
>RBAM_020180(ypbR) Score=6.2 Pos=-349 [Bacillus amyloliquefaciens FZB42]
ATTGAAAATCATTCTCAAT
>RBAM_004860(ydbN) Score=6.1 Pos=-208 [Bacillus amyloliquefaciens FZB42]
ACTGATAATGATTCTCAAT
>RBAM_029050(dhbA) Score=6.7 Pos=-53 [Bacillus amyloliquefaciens FZB42]
AATGATAATCATTATCAAT
>RBAM_007300(yetG) Score=5.8 Pos=-47 [Bacillus amyloliquefaciens FZB42]
TTTGAGAATCATTTTCATT
# TF - Fnr: RBAM_034460
>RBAM_034470(narK) Score=6 Pos=-79 [Bacillus amyloliquefaciens FZB42]
TGTGATGTAATTCACA
>RBAM_034430(narG) Score=5.8 Pos=-81 [Bacillus amyloliquefaciens FZB42]
TGTGACATAGTTCACA
>RBAM_003290(ldh) Score=6 Pos=-57 [Bacillus amyloliquefaciens FZB42]
TGTGAAATACTTCACA
>RBAM_003290(ldh) Score=5.4 Pos=-80 [Bacillus amyloliquefaciens FZB42]
TGTGAAGTATTGCACA
>RBAM_034440(arfM) Score=5.6 Pos=-73 [Bacillus amyloliquefaciens FZB42]
TGTGAAATACATCACT
# TF - ExuR: RBAM_012400
>RBAM_012380(uxaC) Score=6.5 Pos=-38 [Bacillus amyloliquefaciens FZB42]
TTGTTAACGTTAACAT
# TF - CggR: RBAM_031310
>RBAM_031310(cggR) Score=8.6 Pos=-65 [Bacillus amyloliquefaciens FZB42]
TGGGACGTTTTTTGTCATAGCGGGACATTTTCTGTCC
# TF - BirA: RBAM_020590
>RBAM_010550(bioY2) Score=8.6 Pos=-87 [Bacillus amyloliquefaciens FZB42]
ATGTTAAC---------------GTTGACAT
>RBAM_029080(bioY1) Score=7.9 Pos=-84 [Bacillus amyloliquefaciens FZB42]
TAGTAAAC---------------GTTGACAA
>RBAM_018290(bioW) Score=8.2 Pos=-64 [Bacillus amyloliquefaciens FZB42]
GTGTTAAC---------------GTTAACAT
>RBAM_018290(bioW) Score=7.2 Pos=-126 [Bacillus amyloliquefaciens FZB42]
CAGTTAAC---------------GTTGACAT
# TF - ArgR: RBAM_022580
>RBAM_022280(artP) Score=4.5 Pos=-51 [Bacillus amyloliquefaciens FZB42]
ACGAATAAATATTCAA
>RBAM_022280(artP) Score=4.6 Pos=-183 [Bacillus amyloliquefaciens FZB42]
ATAAATATTTATACAT
>RBAM_022280(artP) Score=4.6 Pos=-193 [Bacillus amyloliquefaciens FZB42]
CTGTATAAATATAAAT
>RBAM_026380(argG) Score=5.1 Pos=-51 [Bacillus amyloliquefaciens FZB42]
ATGCATTTTTATTAAT
>RBAM_011190(argC) Score=4.4 Pos=-88 [Bacillus amyloliquefaciens FZB42]
ATGAAAAAATATTAAA
>RBAM_011190(argC) Score=5.1 Pos=-61 [Bacillus amyloliquefaciens FZB42]
ATTAATTTTTATTCAT
>RBAM_011230(carA) Score=4.6 Pos=-53 [Bacillus amyloliquefaciens FZB42]
AAGTATAAAAATTCAT
>RBAM_037250(rocD) Score=4.1 Pos=-209 [Bacillus amyloliquefaciens FZB42]
ATTCATTATTTTAAAA
# TF - MhqR: RBAM_013430
>RBAM_030720(azoR2) Score=5.6 Pos=-137 [Bacillus amyloliquefaciens FZB42]
TATACTGATTTCGAGATA
>RBAM_019330(mhqE) Score=6.4 Pos=-34 [Bacillus amyloliquefaciens FZB42]
TATCTCGAAATCAAGATA
>RBAM_002870(mhqN) Score=6.8 Pos=-35 [Bacillus amyloliquefaciens FZB42]
TATCTCGAATTCGAGATA
>RBAM_002870(mhqN) Score=6.3 Pos=-178 [Bacillus amyloliquefaciens FZB42]
TATCTCGAATTCAAGATT
>RBAM_012720(mhqA) Score=6.6 Pos=-38 [Bacillus amyloliquefaciens FZB42]
TATCTCGAAATCGAGATA
# TF - SinR: RBAM_022930
>RBAM_022960(yqxM) Score=6.1 Pos=-55 [Bacillus amyloliquefaciens FZB42]
GTTCTTTAAAGAGAAC
>RBAM_031670(epsA) Score=6.3 Pos=-125 [Bacillus amyloliquefaciens FZB42]
GTTCTTTAAAAAGAAC
>RBAM_031680(slr) Score=6.3 Pos=-135 [Bacillus amyloliquefaciens FZB42]
GTTCTTTTTAAAGAAC
# TF - PurR: RBAM_000560
>RBAM_022650(nusB) Score=8.9 Pos=-149 [Bacillus amyloliquefaciens FZB42]
AAATCCGAATGAAA----------------AAATATTCGGCATT
>RBAM_029180(guaC) Score=9.5 Pos=-57 [Bacillus amyloliquefaciens FZB42]
AAAGACGAACATTT----------------TATTATTCGCTTTT
>RBAM_020260(xpt) Score=8.5 Pos=-287 [Bacillus amyloliquefaciens FZB42]
AAACACGAATAATC----------------AAAAGTTCGGAAAT
>RBAM_000560(purR) Score=9.1 Pos=-57 [Bacillus amyloliquefaciens FZB42]
AAATCCGTATGTTA----------------AATTATTCGGATTT
>RBAM_006840(purE) Score=9 Pos=-314 [Bacillus amyloliquefaciens FZB42]
AAACACGAACATTA----------------TATCGTTCGATAAT
>RBAM_037450(purA) Score=8.6 Pos=-132 [Bacillus amyloliquefaciens FZB42]
TAAGGCGAACAAAC----------------AAATGTTCGGATTT
>RBAM_006790(pbuG) Score=8.8 Pos=-316 [Bacillus amyloliquefaciens FZB42]
ATTAACGAATAAAC----------------GATTGTTCGTTTTT
>RBAM_034060(glyA) Score=8.6 Pos=-159 [Bacillus amyloliquefaciens FZB42]
GAATGCGAATGATG----------------TAATGTTCGTGTTT
>RBAM_027090(pbuO) Score=9.2 Pos=-55 [Bacillus amyloliquefaciens FZB42]
TAAAACGAATAATA----------------AAATGTTCGTCATT
>RBAM_012710(steT) Score=8.8 Pos=-202 [Bacillus amyloliquefaciens FZB42]
AATAACGAACCTTC----------------TAATGTTCGCTTTT
# TF - CcpA: RBAM_026860
>RBAM_036780(iolA) Score=4.5 Pos=67 [Bacillus amyloliquefaciens FZB42]
ATGAAGACGTTATCAA
>RBAM_036780(iolA) Score=4.8 Pos=-102 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGTTTAATT
>RBAM_036780(iolA) Score=4.5 Pos=-177 [Bacillus amyloliquefaciens FZB42]
ATGTAACCGTTTGCTT
>RBAM_024210(manR) Score=4.7 Pos=-82 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGGTTTCGT
>RBAM_023110(yqgY) Score=4.8 Pos=-73 [Bacillus amyloliquefaciens FZB42]
ATGAAAATGTTTACAT
>RBAM_023130(yqgW) Score=4.8 Pos=-61 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGGTTAAAA
>RBAM_008340(acoR) Score=5 Pos=-67 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGCTTTATT
>RBAM_025950(lrgA) Score=5.3 Pos=-67 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGCTTTAAA
>RBAM_031510(sigL) Score=4.5 Pos=567 [Bacillus amyloliquefaciens FZB42]
TGGAAAGCGCTTACAC
>RBAM_012380(uxaC) Score=4.2 Pos=-123 [Bacillus amyloliquefaciens FZB42]
ATGTTAACGGATACAA
>RBAM_012380(uxaC) Score=4.5 Pos=-38 [Bacillus amyloliquefaciens FZB42]
TTGTTAACGTTAACAT
>RBAM_031330(araR) Score=4.9 Pos=-229 [Bacillus amyloliquefaciens FZB42]
ATAAAAACGCTTACAA
>RBAM_020890(ndk) Score=4.5 Pos=-37 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCCTATACAT
>RBAM_036470(nupC) Score=4.6 Pos=-33 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGAATACAA
>RBAM_017350(xylA) Score=5.1 Pos=34 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGCAAACAA
>RBAM_031490(lutR) Score=4.7 Pos=-181 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGATTACTT
>RBAM_026810(acuA) Score=4.9 Pos=-72 [Bacillus amyloliquefaciens FZB42]
TTGAAAACGCTTTATA
>RBAM_036020(cimH) Score=4.3 Pos=21 [Bacillus amyloliquefaciens FZB42]
TTGCAAACGGATTCAA
>RBAM_034860(ywfI) Score=4.5 Pos=-178 [Bacillus amyloliquefaciens FZB42]
ATTATAGCGCTTTCAA
>RBAM_014960(ylbP) Score=4.9 Pos=-46 [Bacillus amyloliquefaciens FZB42]
ATTAAAGCGTTTACAA
>RBAM_013160(ykoM) Score=4.6 Pos=-51 [Bacillus amyloliquefaciens FZB42]
TTGTAAGGGTTTACAT
>RBAM_015920(sucC) Score=4.8 Pos=-52 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGCAGTCTA
>RBAM_023120(yqgX) Score=4.4 Pos=-109 [Bacillus amyloliquefaciens FZB42]
TTTTAACCGTTTTCAT
>RBAM_002800(glsA1) Score=5 Pos=-62 [Bacillus amyloliquefaciens FZB42]
TTGAAAACGTTTTCCA
>RBAM_025870(abnA) Score=5.3 Pos=-33 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGCTTTAAA
>RBAM_036180(citH) Score=4.7 Pos=-46 [Bacillus amyloliquefaciens FZB42]
GTGAAAGCGCTTACCA
>RBAM_020070(cspD) Score=4.4 Pos=-87 [Bacillus amyloliquefaciens FZB42]
TTAACAACGTTTACAT
>RBAM_010120(yhaR) Score=4.9 Pos=-29 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGGATTCAA
>RBAM_001800(mrp) Score=4.1 Pos=-32 [Bacillus amyloliquefaciens FZB42]
TTGTAAACGAATACAC
>RBAM_007780(citS) Score=4.5 Pos=1297 [Bacillus amyloliquefaciens FZB42]
TTGATAACGCTTTCGA
>RBAM_008300(acoA) Score=4.9 Pos=433 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGTTTGCTT
>RBAM_026800(acsA) Score=4.5 Pos=-102 [Bacillus amyloliquefaciens FZB42]
TATAAAGCGTTTTCAA
>RBAM_003280(amyE) Score=4.9 Pos=-118 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGTTAACAG
>RBAM_031320(araE) Score=4.9 Pos=-43 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGTTTTTAT
>RBAM_036190(bglS) Score=4.9 Pos=-230 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGTTGGCAT
>RBAM_036190(bglS) Score=4.5 Pos=-34 [Bacillus amyloliquefaciens FZB42]
AAGAAATCGCTTTCAA
>RBAM_025370(ilvB) Score=5.2 Pos=-498 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGTATACAA
>RBAM_007070(gatC) Score=5 Pos=-196 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGCTACCAA
>RBAM_014120(fruR) Score=4.5 Pos=-28 [Bacillus amyloliquefaciens FZB42]
ATGAATACGTTTCCAA
>RBAM_033080(rbsR) Score=5 Pos=-33 [Bacillus amyloliquefaciens FZB42]
ATGTAAACGGTTACAT
>RBAM_035790(licB) Score=5.1 Pos=-75 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGATTTCAT
>RBAM_025860(araA) Score=4.4 Pos=-32 [Bacillus amyloliquefaciens FZB42]
ATGCAAGCGCTTTATT
>RBAM_025570(xsa) Score=4.4 Pos=-98 [Bacillus amyloliquefaciens FZB42]
TGTAAAGCGCTTACAA
>RBAM_004230(mtlA) Score=4.6 Pos=-96 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGTTTTATG
>RBAM_004390(mtlR) Score=5 Pos=-96 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGTTTTATA
>RBAM_018380(yngI) Score=5.2 Pos=-44 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGTTTACTA
>RBAM_025750(glcD) Score=4.5 Pos=-37 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGCTTTTCT
>RBAM_036390(abnB) Score=4.9 Pos=-45 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGTTTTAAG
>RBAM_025770(cstA) Score=4.4 Pos=0 [Bacillus amyloliquefaciens FZB42]
ATGAATGCGATTACAA
>RBAM_027180(msmR) Score=4.8 Pos=-91 [Bacillus amyloliquefaciens FZB42]
TTGAAAACGCTTACTC
>RBAM_036360(bglP) Score=4.5 Pos=-257 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGTTGACAC
>RBAM_018230(yxjC) Score=5.2 Pos=-42 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGCTTACTA
>RBAM_023500(cccA) Score=5 Pos=-190 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGTATACAA
>RBAM_022450(mmgA) Score=4.6 Pos=-43 [Bacillus amyloliquefaciens FZB42]
GTGTAAGCGTTATCTT
>RBAM_036040(msmX) Score=5 Pos=-32 [Bacillus amyloliquefaciens FZB42]
AAGAAAGCGTTTACAA
>RBAM_008360(glvA) Score=4.8 Pos=-29 [Bacillus amyloliquefaciens FZB42]
ATGTAAACGTTATCAG
>RBAM_026150(phoP) Score=5.3 Pos=-166 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGTTTTCTT
>RBAM_007810(citM) Score=5.1 Pos=-33 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGTATTCAT
>RBAM_026400(ackA) Score=4.7 Pos=-146 [Bacillus amyloliquefaciens FZB42]
TTGTAAGCGGTACCAA
>RBAM_025520(sdhC) Score=4.3 Pos=-143 [Bacillus amyloliquefaciens FZB42]
ATGTACACGTTTTCTT
>RBAM_017320(xynP) Score=5.1 Pos=-104 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGCTTTTAT
>RBAM_035870(gmuB) Score=4.7 Pos=-38 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGTTTTAAC
>RBAM_036760(iolC) Score=5.1 Pos=-172 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGTTGTCAT
>RBAM_013910(ccpC) Score=4.6 Pos=-99 [Bacillus amyloliquefaciens FZB42]
AAGAAAACGCATACAT
>RBAM_025620(lcfA) Score=4.8 Pos=411 [Bacillus amyloliquefaciens FZB42]
ATGAAAACGTTATCAC
>RBAM_007970(treP) Score=4 Pos=318 [Bacillus amyloliquefaciens FZB42]
GTGAAAACGCTTGCGG
>RBAM_004800(dctA) Score=5.3 Pos=-54 [Bacillus amyloliquefaciens FZB42]
TTGAAAACGCTATCAT
>RBAM_034850(pta) Score=5 Pos=-99 [Bacillus amyloliquefaciens FZB42]
TTGAAAGCGCTATAAT
>RBAM_021610(drm) Score=4.5 Pos=-74 [Bacillus amyloliquefaciens FZB42]
ATGTAAACGGTTTATA
>RBAM_035290(sacP) Score=4.7 Pos=-175 [Bacillus amyloliquefaciens FZB42]
ACGAAAGCGCTATCAT
>RBAM_035290(sacP) Score=5 Pos=-151 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGCATTAAA
>RBAM_014970(apbA) Score=4.9 Pos=-132 [Bacillus amyloliquefaciens FZB42]
TTGTAAACGCTTTAAT
>RBAM_002610(glpT) Score=4.3 Pos=-200 [Bacillus amyloliquefaciens FZB42]
CTTAAAGCGTTTACAT
>RBAM_002610(glpT) Score=4.9 Pos=-162 [Bacillus amyloliquefaciens FZB42]
AAGAAAGCGCTATCAT
>RBAM_014810(ylbB) Score=4.3 Pos=-95 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGTTACACT
>RBAM_026180(citZ) Score=4.6 Pos=-114 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCATTTTCTT
>RBAM_031330(araR) Score=4.6 Pos=-59 [Bacillus amyloliquefaciens FZB42]
ATGAAAGGGCTTACTA
>RBAM_019130(odhA) Score=4.7 Pos=-101 [Bacillus amyloliquefaciens FZB42]
TTGGAAGCGTTTTTAT
>RBAM_035460(galK) Score=4.3 Pos=15 [Bacillus amyloliquefaciens FZB42]
AAGAAAGCGTTTGCTG
>RBAM_017960(yjmD) Score=4.3 Pos=0 [Bacillus amyloliquefaciens FZB42]
ATGAAAGCGGTTCTAG
>RBAM_035650(licC2) Score=5.1 Pos=-80 [Bacillus amyloliquefaciens FZB42]
ATGTAAGCGTTTCCAA
# TF - GlnR: RBAM_017250
>RBAM_017250(glnR) Score=5.3 Pos=-83 [Bacillus amyloliquefaciens FZB42]
ATGTTAAGATTCCTTACAT
>RBAM_017250(glnR) Score=5 Pos=-60 [Bacillus amyloliquefaciens FZB42]
TTGACACAAAATATAACAT
>RBAM_033830(ureA) Score=4.8 Pos=-204 [Bacillus amyloliquefaciens FZB42]
ATGTAACCTTTCTTCACAT
# TF - MsmR: RBAM_027180
>RBAM_027180(msmR) Score=5.4 Pos=-93 [Bacillus amyloliquefaciens FZB42]
TGTTGAAAACGCTTACTCTC
# TF - NrdR: RBAM_026040
>RBAM_017170(nrdI) Score=4.8 Pos=-85 [Bacillus amyloliquefaciens FZB42]
TCTCAATATGTTGTGT
>RBAM_017170(nrdI) Score=5.9 Pos=-52 [Bacillus amyloliquefaciens FZB42]
ATACTATATATAGTGT
# TF - RbsR: RBAM_033080
>RBAM_033080(rbsR) Score=6.3 Pos=-35 [Bacillus amyloliquefaciens FZB42]
TTATGTAAACGGTTACATAG
# TF - TnrA: RBAM_013130
>RBAM_033650(pucI) Score=3.9 Pos=-32 [Bacillus amyloliquefaciens FZB42]
TGTAAGGAAAACGTACA
>RBAM_017940(alsT) Score=4.8 Pos=-64 [Bacillus amyloliquefaciens FZB42]
TGTTAAAAGATCTAACA
>RBAM_011190(argC) Score=4.7 Pos=-38 [Bacillus amyloliquefaciens FZB42]
TGTTAAATAATTTCACA
>RBAM_024530(glnQ) Score=3.5 Pos=-123 [Bacillus amyloliquefaciens FZB42]
TATCAGAAATTACGAAA
>RBAM_017250(glnR) Score=4.3 Pos=-82 [Bacillus amyloliquefaciens FZB42]
TGTTAAGATTCCTTACA
>RBAM_017250(glnR) Score=4.9 Pos=-59 [Bacillus amyloliquefaciens FZB42]
TGACACAAAATATAACA
>RBAM_018620(gltA) Score=5 Pos=-52 [Bacillus amyloliquefaciens FZB42]
TGTCAGATTTTATGACC
>RBAM_018630(gltC) Score=5 Pos=-110 [Bacillus amyloliquefaciens FZB42]
GGTCATAAAATCTGACA
>RBAM_025370(ilvB) Score=5.2 Pos=-611 [Bacillus amyloliquefaciens FZB42]
TGTAATAAAATGTGACA
>RBAM_032200(nagA) Score=3.9 Pos=-129 [Bacillus amyloliquefaciens FZB42]
AGTTATATTTTATCACT
>RBAM_003530(nasB) Score=4.8 Pos=-100 [Bacillus amyloliquefaciens FZB42]
TGTAAGATAATGCGACA
>RBAM_003510(nasD) Score=4.9 Pos=-84 [Bacillus amyloliquefaciens FZB42]
TGTTACATTTCATAACA
>RBAM_003540(nasA) Score=4.8 Pos=-97 [Bacillus amyloliquefaciens FZB42]
TGTCGCATTATCTTACA
>RBAM_033680(nrgA) Score=5.2 Pos=-98 [Bacillus amyloliquefaciens FZB42]
TGTCAGATAACCTTACA
>RBAM_011360(appD) Score=4.1 Pos=-101 [Bacillus amyloliquefaciens FZB42]
TGTAATAATATACAACT
>RBAM_011430(oppA) Score=4.3 Pos=-231 [Bacillus amyloliquefaciens FZB42]
TGACAGAAAAACTGACC
>RBAM_007720(pel) Score=4.4 Pos=-40 [Bacillus amyloliquefaciens FZB42]
TGTAATAAATTGGAACA
>RBAM_029500(pucH) Score=4.9 Pos=-50 [Bacillus amyloliquefaciens FZB42]
TGTGATAAAAACTGACA
>RBAM_029510(pucR) Score=4.9 Pos=-146 [Bacillus amyloliquefaciens FZB42]
TGTCAGTTTTTATCACA
>RBAM_023580(recO) Score=4.9 Pos=-310 [Bacillus amyloliquefaciens FZB42]
TGTGAGATTACCTCACA
>RBAM_013130(tnrA) Score=4.1 Pos=-124 [Bacillus amyloliquefaciens FZB42]
TGTCAATTTTTCTGCCG
>RBAM_013130(tnrA) Score=4.8 Pos=-81 [Bacillus amyloliquefaciens FZB42]
CGTCAGAAAACCTGACA
>RBAM_033830(ureA) Score=4.2 Pos=-308 [Bacillus amyloliquefaciens FZB42]
TGTTATGAGAAATGACA
>RBAM_033830(ureA) Score=3.9 Pos=-203 [Bacillus amyloliquefaciens FZB42]
TGTAACCTTTCTTCACA
>RBAM_003850(yclG) Score=4.9 Pos=-121 [Bacillus amyloliquefaciens FZB42]
TGTTATATTATCTGACT
>RBAM_004280(lamB) Score=4.9 Pos=-137 [Bacillus amyloliquefaciens FZB42]
TGGTAGGTTTTCTGACA
>RBAM_004400(ydaB) Score=4.5 Pos=-54 [Bacillus amyloliquefaciens FZB42]
AGAAAGAAAATCTGACA
>RBAM_013140(ykzB) Score=4.8 Pos=-130 [Bacillus amyloliquefaciens FZB42]
TGTCAGGTTTTCTGACG
>RBAM_013140(ykzB) Score=4.1 Pos=-87 [Bacillus amyloliquefaciens FZB42]
CGGCAGAAAAATTGACA
>RBAM_019340(yodF) Score=4.9 Pos=-261 [Bacillus amyloliquefaciens FZB42]
TGTGATCTTATCTGACA
>RBAM_035380(ysnE) Score=4.1 Pos=-210 [Bacillus amyloliquefaciens FZB42]
TTGAACATTTTGTTACA
>RBAM_035380(ysnE) Score=4.3 Pos=-85 [Bacillus amyloliquefaciens FZB42]
TGTCACATTTCCGGACA
>RBAM_032990(yttA) Score=3.6 Pos=-26 [Bacillus amyloliquefaciens FZB42]
TGTAAGATAAAGAAAAA
>RBAM_029140(yuiA) Score=4.8 Pos=-76 [Bacillus amyloliquefaciens FZB42]
TGTTACATATTCTGACT
>RBAM_029160(yumC) Score=3.9 Pos=-229 [Bacillus amyloliquefaciens FZB42]
TGAAATGAAATATAAAA
>RBAM_029160(yumC) Score=4.9 Pos=-42 [Bacillus amyloliquefaciens FZB42]
TGTTATAATTAATAACA
>RBAM_030630(yvgT) Score=4.8 Pos=-37 [Bacillus amyloliquefaciens FZB42]
CGTCAGAAAATTTAACA
>RBAM_035200(ywdI) Score=4.7 Pos=-92 [Bacillus amyloliquefaciens FZB42]
CGTCAGAAAAAATAACA
>RBAM_034080(rpiB) Score=4.7 Pos=-131 [Bacillus amyloliquefaciens FZB42]
TGTCAGAAAATCTGCAA
>RBAM_033270(ywrD) Score=4.9 Pos=-78 [Bacillus amyloliquefaciens FZB42]
TGTGAGATTTTCTTTCA
>RBAM_037500(yycC) Score=4.1 Pos=-64 [Bacillus amyloliquefaciens FZB42]
TGTCATATCCTCTTACG
>RBAM_003080(rapJ) Score=4.4 Pos=-48 [Bacillus amyloliquefaciens FZB42]
TATGATAAAATATAACA
>RBAM_003840(yclF) Score=3.4 Pos=-211 [Bacillus amyloliquefaciens FZB42]
CTTTAAATTTTATTAAA
>RBAM_003840(yclF) Score=4.9 Pos=-174 [Bacillus amyloliquefaciens FZB42]
AGTCAGATAATATAACA
>RBAM_012870(ykgA) Score=4.4 Pos=-86 [Bacillus amyloliquefaciens FZB42]
GGTTAGATATTCTCTCA
>RBAM_012870(ykgA) Score=3.7 Pos=-63 [Bacillus amyloliquefaciens FZB42]
TTTCATTATTCATCACA
>RBAM_036070(yxkC) Score=3.3 Pos=-68 [Bacillus amyloliquefaciens FZB42]
CTATAGGTTATTTTACA
>RBAM_006710(gabP) Score=5.4 Pos=-100 [Bacillus amyloliquefaciens FZB42]
TGTCATATTTTCTTACA
# TF - BglR: RBAM_019370
>RBAM_019360(bglA) Score=6.7 Pos=-146 [Bacillus amyloliquefaciens FZB42]
AATTATACCGGTACAATT
>RBAM_019370(bglR) Score=6.7 Pos=-121 [Bacillus amyloliquefaciens FZB42]
AATTGTACCGGTATAATT
# TF - YisR: RBAM_010980
>RBAM_010970(yisQ) Score=7 Pos=-105 [Bacillus amyloliquefaciens FZB42]
TTAAGTCGGATTTTTGCAAG
# TF - HisR: RBAM_006980
>RBAM_032140(hisZ) Score=5.3 Pos=-61 [Bacillus amyloliquefaciens FZB42]
CATATTAGCGAACTAAAGGA
>RBAM_029090(yuiF) Score=5.7 Pos=-39 [Bacillus amyloliquefaciens FZB42]
TACATTAGCAAACTAAAGGA
# TF - AseR: RBAM_035850
>RBAM_035850(aseR) Score=6.9 Pos=-46 [Bacillus amyloliquefaciens FZB42]
TATATAAACATCTGCTTATATA
# TF - CzrA: RBAM_018890
>RBAM_005600(czcD) Score=6.9 Pos=-106 [Bacillus amyloliquefaciens FZB42]
TATATGAGCACATAATCATATA
>RBAM_030670(czcD) Score=7.3 Pos=-87 [Bacillus amyloliquefaciens FZB42]
TATATGAGTATATGTTCATATA
# TF - YwrC: RBAM_033280
>RBAM_033280(ywrC) Score=4.7 Pos=-92 [Bacillus amyloliquefaciens FZB42]
TTACGTATCGAAA
# TF - RocR: RBAM_037260
>RBAM_037260(rocR) Score=8.7 Pos=-59 [Bacillus amyloliquefaciens FZB42]
CGCAAAAT-TTTTTGCG
>RBAM_034980(rocA) Score=7.6 Pos=-199 [Bacillus amyloliquefaciens FZB42]
CGCAAAGA-ATTTTGCA
>RBAM_034980(rocA) Score=7.8 Pos=-165 [Bacillus amyloliquefaciens FZB42]
CGCAAAAT-TCTTTGCG
>RBAM_037250(rocD) Score=8.7 Pos=-177 [Bacillus amyloliquefaciens FZB42]
CGCAAAAA-ATTTTGCG
# TF - AcoR: RBAM_008340
>RBAM_008300(acoA) Score=8.1 Pos=-129 [Bacillus amyloliquefaciens FZB42]
GACAAAATGAGACACCTGTCTCAAACTGTCTC
# TF - GmuR: RBAM_006170
>RBAM_035870(gmuB) Score=6.9 Pos=-78 [Bacillus amyloliquefaciens FZB42]
TAAAAGTATAGACATTTA
# TF - BkdR: RBAM_022380
>RBAM_022370(ptb) Score=5.8 Pos=-130 [Bacillus amyloliquefaciens FZB42]
TGCAATAAATTGCA
>RBAM_022380(bkdR) Score=4.7 Pos=-31 [Bacillus amyloliquefaciens FZB42]
TGCAAATTTTTTCA
>RBAM_022380(bkdR) Score=5.6 Pos=-61 [Bacillus amyloliquefaciens FZB42]
TGCAAATTATTGCA
# TF - CcpN: RBAM_023550
>RBAM_027580(pckA) Score=4.7 Pos=-63 [Bacillus amyloliquefaciens FZB42]
GATATATGTTATACTAATTCC
>RBAM_026060(gapB) Score=5.1 Pos=-68 [Bacillus amyloliquefaciens FZB42]
TTAATGTGTTATACTATATAT
# TF - BglZ: RBAM_013640
>RBAM_003590(bglC) Score=6.6 Pos=-60 [Bacillus amyloliquefaciens FZB42]
TCTGAAACGCGTTTCATA
>RBAM_013640(bglZ) Score=6.1 Pos=-47 [Bacillus amyloliquefaciens FZB42]
TATGAAACGCATTCCAGA
# TF - FadR: RBAM_025610
>RBAM_013850(ykuF) Score=6.8 Pos=-40 [Bacillus amyloliquefaciens FZB42]
ATGAATGATTATTCATTCAA
>RBAM_010470(lcfB) Score=6.9 Pos=-44 [Bacillus amyloliquefaciens FZB42]
ATGAATGACTATTCATTCAT
>RBAM_029920(fadN) Score=6.7 Pos=-39 [Bacillus amyloliquefaciens FZB42]
ATGAATGACTATTCATTCAA
>RBAM_025610(fadR) Score=6.9 Pos=-38 [Bacillus amyloliquefaciens FZB42]
ATGAATGAATAGTCATTCAT
>RBAM_034330(fadF) Score=6.3 Pos=-82 [Bacillus amyloliquefaciens FZB42]
TTGACTGAACACTCATTCAT
# TF - CitR: RBAM_009690
>RBAM_009700(citA) Score=6.3 Pos=-90 [Bacillus amyloliquefaciens FZB42]
TGATTAAAAGTTTTAATTA
>RBAM_009690(citR) Score=6.3 Pos=-32 [Bacillus amyloliquefaciens FZB42]
TAATTAAAACTTTTAATCA
# TF - DeoR: RBAM_036490
>RBAM_036480(dra) Score=6.5 Pos=-84 [Bacillus amyloliquefaciens FZB42]
ATGAACATAATTTCAA
>RBAM_036480(dra) Score=4.1 Pos=-61 [Bacillus amyloliquefaciens FZB42]
ATttACAtAtgTTCAA
# TF - YtlI: RBAM_030860
>RBAM_030850(ytmI) Score=5.4 Pos=-129 [Bacillus amyloliquefaciens FZB42]
ATTAATTTTCTTGAA
>RBAM_030860(ytlI) Score=1.6 Pos=-36 [Bacillus amyloliquefaciens FZB42]
ATCAAAAAAAgTAAA
>RBAM_030850(ytmI) Score=5.8 Pos=-107 [Bacillus amyloliquefaciens FZB42]
TTTACTTTTTTTGAT
>RBAM_030860(ytlI) Score=2.4 Pos=-14 [Bacillus amyloliquefaciens FZB42]
tTCAAgAAAATTAAT
# TF - YwbI: RBAM_035570
>RBAM_035570(ywbI) Score=6 Pos=-63 [Bacillus amyloliquefaciens FZB42]
ATAGGTAAAATACATAT
>RBAM_035580(cidA) Score=6 Pos=-60 [Bacillus amyloliquefaciens FZB42]
ATATGTATTTTACCTAT
# TF - YdfI: RBAM_005930
>RBAM_005940(ydfJ) Score=10.6 Pos=-89 [Bacillus amyloliquefaciens FZB42]
GCCCAAACGTAC--GCCCTTATGTAC
# TF - CysL: RBAM_034830
>RBAM_030610(cysJ) Score=5.2 Pos=-143 [Bacillus amyloliquefaciens FZB42]
ATTAGTAATCTTAAT
>RBAM_030610(cysJ) Score=3.9 Pos=-115 [Bacillus amyloliquefaciens FZB42]
ATTATATATTTTACT
>RBAM_034830(cysL) Score=4.5 Pos=-64 [Bacillus amyloliquefaciens FZB42]
ATTAGTAAAATATAT
>RBAM_034830(cysL) Score=4.8 Pos=-33 [Bacillus amyloliquefaciens FZB42]
ATTAGGAAAAATAAT
# TF - YetL: RBAM_007360
>RBAM_007360(yetL) Score=4.7 Pos=-149 [Bacillus amyloliquefaciens FZB42]
ACGATACCGCCTTCTCTA
>RBAM_007370(yetM) Score=4.7 Pos=-31 [Bacillus amyloliquefaciens FZB42]
TAGAGAAGGCGGTATCGT
# TF - OhrR: RBAM_012960
>RBAM_012950(ohrA) Score=5.6 Pos=-49 [Bacillus amyloliquefaciens FZB42]
TATATTGTGTAAAATTAA
>RBAM_012950(ohrA) Score=6.3 Pos=-34 [Bacillus amyloliquefaciens FZB42]
TAAATTGTACACAATATA
# TF - LmrA: RBAM_002990
>RBAM_002990(lmrA) Score=5.2 Pos=-55 [Bacillus amyloliquefaciens FZB42]
AATAGACCAGTCACTA
# TF - CodY: RBAM_016000
>RBAM_011430(oppA) Score=4.3 Pos=-115 [Bacillus amyloliquefaciens FZB42]
AATAATCAGAAAAGA
>RBAM_014460(slp) Score=4.4 Pos=-115 [Bacillus amyloliquefaciens FZB42]
AATTATATAACAATT
>RBAM_002460(ybxG) Score=4.4 Pos=-268 [Bacillus amyloliquefaciens FZB42]
TATTATCTTAATATT
>RBAM_038050 Score=4.5 Pos=-39 [Bacillus amyloliquefaciens FZB42]
ACTATTCTGAAAAAT
>RBAM_014000(rok) Score=4.6 Pos=-133 [Bacillus amyloliquefaciens FZB42]
CATTTTCAGAAAATA
>RBAM_010680(yhjC) Score=4.6 Pos=-85 [Bacillus amyloliquefaciens FZB42]
AAATTTCAGACTATT
>RBAM_005540(cotR) Score=4.5 Pos=-185 [Bacillus amyloliquefaciens FZB42]
TATTTTTAAATAATT
>RBAM_028120(yuaF) Score=4.7 Pos=-84 [Bacillus amyloliquefaciens FZB42]
ACTTATCAGAAAATT
>RBAM_028130(yuaE) Score=4.7 Pos=-77 [Bacillus amyloliquefaciens FZB42]
AATTTTCTGATAAGT
>RBAM_010260(serC) Score=4.4 Pos=-75 [Bacillus amyloliquefaciens FZB42]
AAAAATCAAAAAATT
>RBAM_029670(frlB) Score=4.8 Pos=-103 [Bacillus amyloliquefaciens FZB42]
AAATTTCAGAAAATA
>RBAM_003510(nasD) Score=4.4 Pos=-109 [Bacillus amyloliquefaciens FZB42]
AATTTTTAGATTTTT
>RBAM_017250(glnR) Score=4.7 Pos=-100 [Bacillus amyloliquefaciens FZB42]
AATTTTCAAAGAATT
>RBAM_012430(yjnA) Score=5 Pos=-84 [Bacillus amyloliquefaciens FZB42]
AATTTTCCGAAAATT
>RBAM_003260(ycgA) Score=4.6 Pos=-182 [Bacillus amyloliquefaciens FZB42]
TATTTTCTGAATAGT
>RBAM_003250(amhX) Score=4.6 Pos=-104 [Bacillus amyloliquefaciens FZB42]
ACTATTCAGAAAATA
>RBAM_033830(ureA) Score=4.6 Pos=-251 [Bacillus amyloliquefaciens FZB42]
AATATTCTATAAATT
>RBAM_020410(yppF) Score=4.3 Pos=-76 [Bacillus amyloliquefaciens FZB42]
AATTTTTTAAAAACA
>RBAM_009690(citR) Score=4.6 Pos=-67 [Bacillus amyloliquefaciens FZB42]
AATATTTAAAAAATA
>RBAM_036120(metE2) Score=4.4 Pos=-188 [Bacillus amyloliquefaciens FZB42]
TTTATTCTGAAAAAT
>RBAM_026530(braB) Score=4.6 Pos=-41 [Bacillus amyloliquefaciens FZB42]
AATTGACAGAATATT
>RBAM_026530(braB) Score=4.7 Pos=-56 [Bacillus amyloliquefaciens FZB42]
TATTATCTGACAATT
>RBAM_002680(gldA) Score=4.5 Pos=-55 [Bacillus amyloliquefaciens FZB42]
TATTTTCTGACAAGT
>RBAM_015170(ylmA) Score=4.8 Pos=-42 [Bacillus amyloliquefaciens FZB42]
AGTTTTTAGAAAATT
>RBAM_009720(yhdG) Score=4.8 Pos=-165 [Bacillus amyloliquefaciens FZB42]
AATTTTCAAAAAAGT
>RBAM_002750(gltP) Score=4.4 Pos=-229 [Bacillus amyloliquefaciens FZB42]
AATTATCAAAATTTT
>RBAM_027650(ytkC) Score=4.9 Pos=-70 [Bacillus amyloliquefaciens FZB42]
ATTTTTCTGAAAAAT
>RBAM_025530(yslB) Score=4.5 Pos=-213 [Bacillus amyloliquefaciens FZB42]
AATTTATTGACAATT
>RBAM_025520(sdhC) Score=4.5 Pos=-98 [Bacillus amyloliquefaciens FZB42]
AATTGTCAATAAATT
>RBAM_002760(ybgE) Score=4.4 Pos=-152 [Bacillus amyloliquefaciens FZB42]
AAAATTTTGATAATT
>RBAM_028640(nupN) Score=4.5 Pos=-243 [Bacillus amyloliquefaciens FZB42]
ATTTTTTAAAAAATA
>RBAM_028640(nupN) Score=4.5 Pos=-244 [Bacillus amyloliquefaciens FZB42]
TATTTTTTAAAAAAT
>RBAM_019090(yocR) Score=4.4 Pos=-49 [Bacillus amyloliquefaciens FZB42]
TATATTCTTACAATT
>RBAM_019100(yocS) Score=4.4 Pos=-169 [Bacillus amyloliquefaciens FZB42]
AATTGTAAGAATATA
>RBAM_024530(glnQ) Score=4.6 Pos=-96 [Bacillus amyloliquefaciens FZB42]
AATATTCATAAAAAT
>RBAM_024530(glnQ) Score=4.5 Pos=-126 [Bacillus amyloliquefaciens FZB42]
AATTATCAGAAATTA
>RBAM_013310(kinE) Score=4.6 Pos=-90 [Bacillus amyloliquefaciens FZB42]
AATTTTCTGAAATGT
>RBAM_028570(kapD) Score=4.4 Pos=-93 [Bacillus amyloliquefaciens FZB42]
TATTTTTAGAAAATG
>RBAM_029920(fadN) Score=4.5 Pos=-132 [Bacillus amyloliquefaciens FZB42]
AAATTTAAAAAAATT
>RBAM_029370(hom) Score=4.8 Pos=-185 [Bacillus amyloliquefaciens FZB42]
AATATTTAGAAAATA
>RBAM_031050(opuBA) Score=4.8 Pos=-66 [Bacillus amyloliquefaciens FZB42]
AATTGTCTGAAAAGT
>RBAM_031100(opuCA) Score=4.7 Pos=-41 [Bacillus amyloliquefaciens FZB42]
ACTTTTCAGAAAAAT
>RBAM_007070(gatC) Score=4.5 Pos=-163 [Bacillus amyloliquefaciens FZB42]
AATTTTCTGACATAT
>RBAM_010600(comK) Score=4.2 Pos=-88 [Bacillus amyloliquefaciens FZB42]
TATATTCAAAAAAAA
>RBAM_017790(sspO) Score=4.7 Pos=-169 [Bacillus amyloliquefaciens FZB42]
AATTTTCTCACAATT
>RBAM_028580(yuxJ) Score=4.4 Pos=-178 [Bacillus amyloliquefaciens FZB42]
CATTTTCTAAAAATA
>RBAM_012770(dppA) Score=4.5 Pos=-58 [Bacillus amyloliquefaciens FZB42]
ATTTGTTAGAATATT
>RBAM_007060(opuE) Score=4.5 Pos=-273 [Bacillus amyloliquefaciens FZB42]
ATATGTCAGAAAATT
>RBAM_011920(ycjH) Score=4.6 Pos=-70 [Bacillus amyloliquefaciens FZB42]
AAATTTCTAATAATT
>RBAM_019920(ilvA) Score=4.5 Pos=-67 [Bacillus amyloliquefaciens FZB42]
TATTATTTGAATATT
>RBAM_019920(ilvA) Score=4.4 Pos=-75 [Bacillus amyloliquefaciens FZB42]
AATTGTCTTATTATT
>RBAM_033730(spoIIQ) Score=4.8 Pos=-44 [Bacillus amyloliquefaciens FZB42]
TATTTTCAGAAAAGT
>RBAM_020010(ilvD) Score=4.5 Pos=-56 [Bacillus amyloliquefaciens FZB42]
AATAAACTGAAAATT
>RBAM_021220(serA) Score=4.5 Pos=-44 [Bacillus amyloliquefaciens FZB42]
AATTATCAGATATTT
>RBAM_026810(acuA) Score=4.6 Pos=-100 [Bacillus amyloliquefaciens FZB42]
AATTTTTAAAATATA
>RBAM_009700(citA) Score=4.6 Pos=-51 [Bacillus amyloliquefaciens FZB42]
TATTTTTTAAATATT
>RBAM_034930(bacA) Score=4.4 Pos=-26 [Bacillus amyloliquefaciens FZB42]
TATTTACTTAAAATT
>RBAM_034930(bacA) Score=4.5 Pos=-67 [Bacillus amyloliquefaciens FZB42]
TATTTTCAAATAATA
>RBAM_019340(yodF) Score=4.6 Pos=-280 [Bacillus amyloliquefaciens FZB42]
TTTTTTCTGAAAAAT
>RBAM_016820(spoVS) Score=4.4 Pos=-186 [Bacillus amyloliquefaciens FZB42]
TATTTTATAAAAATA
>RBAM_017800(citB) Score=4.7 Pos=-77 [Bacillus amyloliquefaciens FZB42]
AATTGTGAGAAAATT
>RBAM_026400(ackA) Score=4.6 Pos=-172 [Bacillus amyloliquefaciens FZB42]
ATTTATCAGAAAATA
>RBAM_026800(acsA) Score=4.6 Pos=-73 [Bacillus amyloliquefaciens FZB42]
TATATTTTAAAAATT
>RBAM_016830(tdh) Score=4.5 Pos=-137 [Bacillus amyloliquefaciens FZB42]
AATATTCAAAAAAAA
>RBAM_026520(iscS) Score=4.7 Pos=-152 [Bacillus amyloliquefaciens FZB42]
AATTGTCAGATAATA
>RBAM_026520(iscS) Score=4.6 Pos=-167 [Bacillus amyloliquefaciens FZB42]
AATATTCTGTCAATT
>RBAM_026180(citZ) Score=4.2 Pos=-224 [Bacillus amyloliquefaciens FZB42]
ATTAATCAGATTATT
>RBAM_025370(ilvB) Score=4.7 Pos=-464 [Bacillus amyloliquefaciens FZB42]
AATTGTCTAATAATT
>RBAM_003440(putB) Score=4.8 Pos=-23 [Bacillus amyloliquefaciens FZB42]
TATTTTTAGAATATT
>RBAM_036400(hutP) Score=4.5 Pos=-36 [Bacillus amyloliquefaciens FZB42]
AGTTATCAGAATATT
>RBAM_003650(srfAA) Score=4.4 Pos=-398 [Bacillus amyloliquefaciens FZB42]
AATATTTTTAAAAAT
>RBAM_029140(yuiA) Score=4.9 Pos=-34 [Bacillus amyloliquefaciens FZB42]
TATTATCAGAAAATT
>RBAM_011930(metI) Score=4.6 Pos=-314 [Bacillus amyloliquefaciens FZB42]
AATTATTAGAAATTT
>RBAM_006710(gabP) Score=4.3 Pos=-160 [Bacillus amyloliquefaciens FZB42]
AAATAACAGAAAATT
>RBAM_006710(gabP) Score=4 Pos=-45 [Bacillus amyloliquefaciens FZB42]
ACTTGTCGGAATATT
>RBAM_010310(yhaA) Score=4.2 Pos=-57 [Bacillus amyloliquefaciens FZB42]
AATCTTCTGACATTT
>RBAM_035750(ybgE) Score=4.3 Pos=-48 [Bacillus amyloliquefaciens FZB42]
TATTTTCAAATAAGT
# TF - QdoR: RBAM_032230
>RBAM_002990(lmrA) Score=4.9 Pos=-54 [Bacillus amyloliquefaciens FZB42]
ATAGACCAGTCACTATAT
# TF - FatR: RBAM_024270
>RBAM_024270(fatR) Score=7 Pos=-3 [Bacillus amyloliquefaciens FZB42]
GGAATGAATATTCATTCC
# TF - IolR: RBAM_036790
>RBAM_036780(iolA) Score=6.5 Pos=-224 [Bacillus amyloliquefaciens FZB42]
TAACCAAGAAATGACCAAAACA
>RBAM_036780(iolA) Score=4.6 Pos=-213 [Bacillus amyloliquefaciens FZB42]
TGACCAAAACATAACCTGTAAA
>RBAM_036790(iolR) Score=-0.6 Pos=-69 [Bacillus amyloliquefaciens FZB42]
ACTATTGATTAACTTCTGGTGT
# TF - GltC: RBAM_018630
>RBAM_018630(gltC) Score=5.2 Pos=-32 [Bacillus amyloliquefaciens FZB42]
ATCTCAAAATGAGAT
>RBAM_018630(gltC) Score=5.3 Pos=-54 [Bacillus amyloliquefaciens FZB42]
ATATATAATTTAGAT
>RBAM_018620(gltA) Score=5.3 Pos=-106 [Bacillus amyloliquefaciens FZB42]
ATCTAAATTATATAT
>RBAM_018620(gltA) Score=5.2 Pos=-128 [Bacillus amyloliquefaciens FZB42]
ATCTCATTTTGAGAT
# TF - BltR: RBAM_006050
>RBAM_006040(bltD) Score=6.4 Pos=-120 [Bacillus amyloliquefaciens FZB42]
GACTATACGGTAACCATATCCTT
# TF - NagR: RBAM_032220
>RBAM_032200(nagA) Score=6.2 Pos=-73 [Bacillus amyloliquefaciens FZB42]
TAACTGGTCTAGATAACTAG
>RBAM_007900(nagP) Score=5.8 Pos=-66 [Bacillus amyloliquefaciens FZB42]
AAATTGGTATAGATCACTAG
# TF - LutR: RBAM_031490
>RBAM_031470(lutA) Score=6.4 Pos=-51 [Bacillus amyloliquefaciens FZB42]
CAGGTCATCAGATGACCAG
>RBAM_031490(lutR) Score=6.3 Pos=-157 [Bacillus amyloliquefaciens FZB42]
AAGGTCATCTGATGACCGG
>RBAM_031500(lutP) Score=6.4 Pos=-67 [Bacillus amyloliquefaciens FZB42]
CCGGTCATCAGATGACCTT
# TF - FrlR: RBAM_029620
>RBAM_029660(frlO) Score=5.2 Pos=-32 [Bacillus amyloliquefaciens FZB42]
CGGACTATAATGATATATAACG
>RBAM_029660(frlO) Score=5.8 Pos=-22 [Bacillus amyloliquefaciens FZB42]
TGATATATAACGTTATAGTCCG
>RBAM_029610(yurJ) Score=6.5 Pos=-116 [Bacillus amyloliquefaciens FZB42]
TGTATTATGACGTTATAATACA
>RBAM_029670(frlB) Score=6.6 Pos=-43 [Bacillus amyloliquefaciens FZB42]
TGTTATATAACATTATATAATA
>RBAM_029670(frlB) Score=5.5 Pos=-63 [Bacillus amyloliquefaciens FZB42]
ATTAATATAACGTTATATAATG
>RBAM_029620(frlR) Score=6.5 Pos=-61 [Bacillus amyloliquefaciens FZB42]
TGTATTATAACGTCATAATACA
# TF - YhcF: RBAM_009330
>RBAM_009320(yhcE) Score=6.4 Pos=-46 [Bacillus amyloliquefaciens FZB42]
GTGTACTATGTTACTCATACAC
# TF - KipR: RBAM_004330
>RBAM_004280(ycsF) Score=5.5 Pos=-56 [Bacillus amyloliquefaciens FZB42]
ATTCCGAATAGCGGAAT
# TF - AdaA: RBAM_037970
>RBAM_037970(adaA) Score=7.5 Pos=-80 [Bacillus amyloliquefaciens FZB42]
TTTGTTATCTTGCTCC
# TF - CcpC: RBAM_013910
>RBAM_026180(citZ) Score=5.5 Pos=-172 [Bacillus amyloliquefaciens FZB42]
ATAAGAATTTGTTAT
>RBAM_017800(citB) Score=5.3 Pos=-146 [Bacillus amyloliquefaciens FZB42]
ATAAGACGATCTTAT
# TF - BceR: RBAM_027330
>RBAM_027310(bceA) Score=7.9 Pos=-110 [Bacillus amyloliquefaciens FZB42]
TGTGAC-----TGTCAC
# TF - AlsR: RBAM_033180
>RBAM_033180(alsR) Score=5.8 Pos=-46 [Bacillus amyloliquefaciens FZB42]
TAATATGTTTCACGAATAA
>RBAM_033170(alsS) Score=5.8 Pos=-126 [Bacillus amyloliquefaciens FZB42]
TTATTCGTGAAACATATTA
# TF - DesR: RBAM_036850
>RBAM_036870(des) Score=7.9 Pos=-101 [Bacillus amyloliquefaciens FZB42]
ATGACAAATGTCAT
# TF - CssR: RBAM_030120
>RBAM_012750(htrA) Score=6.4 Pos=-90 [Bacillus amyloliquefaciens FZB42]
TTTTCATTTTATCCCA
>RBAM_030110(htrB) Score=6.4 Pos=-200 [Bacillus amyloliquefaciens FZB42]
TTTTCATTTTATCCCA
>RBAM_012750(htrA) Score=8.5 Pos=-111 [Bacillus amyloliquefaciens FZB42]
TTTTCACAATTTCCCA
>RBAM_030120(cssR) Score=1.1 Pos=-71 [Bacillus amyloliquefaciens FZB42]
TGTGAAATTATGAAAA
>RBAM_030110(htrB) Score=8.5 Pos=-221 [Bacillus amyloliquefaciens FZB42]
TTTTCATAATTTCACA
>RBAM_030120(cssR) Score=0.4 Pos=-93 [Bacillus amyloliquefaciens FZB42]
TGGGATAAAATGAAAA
# TF - FapR: RBAM_015710
>RBAM_010400(fabHB) Score=4.9 Pos=-60 [Bacillus amyloliquefaciens FZB42]
AAATTAGTACCAAGTA
>RBAM_011330(fabHA) Score=4.5 Pos=-74 [Bacillus amyloliquefaciens FZB42]
GAATTAGTACCTGATA
>RBAM_015710(fapR) Score=4.6 Pos=-41 [Bacillus amyloliquefaciens FZB42]
CTATTAGTACCTAGTC
>RBAM_011730(fabI) Score=4.4 Pos=-52 [Bacillus amyloliquefaciens FZB42]
GATCAGGTACTAAAAC
>RBAM_009770(plsC) Score=4.7 Pos=-81 [Bacillus amyloliquefaciens FZB42]
TTATTAGTACCAGGTA
# TF - ComA: RBAM_028760
>RBAM_003650(srfAC) Score=9 Pos=-337 [Bacillus amyloliquefaciens FZB42]
TTTCGGTGTGCCGCAT--------------TTTCGG
>RBAM_004010(rapC) Score=7.1 Pos=-103 [Bacillus amyloliquefaciens FZB42]
TTGCGCTCTGCCGAAA--------------TTTCGG
>RBAM_012450(rapA) Score=7.3 Pos=-112 [Bacillus amyloliquefaciens FZB42]
TTGCGGATATCCGAAA--------------TTGCGG
>RBAM_028800(degQ) Score=8.1 Pos=-146 [Bacillus amyloliquefaciens FZB42]
TTGCGGTGTCACGCAG--------------TTTCGG
# TF - FruR: RBAM_014120
>RBAM_014120(fruR) Score=8.3 Pos=-95 [Bacillus amyloliquefaciens FZB42]
TGAATGAATTTGAGTGATTT
>RBAM_014120(fruR) Score=8.3 Pos=-115 [Bacillus amyloliquefaciens FZB42]
TGAAAGATTTTGATAGTTAT
# TF - CtsR: RBAM_001080
>RBAM_033150(gs14) Score=7.5 Pos=-27 [Bacillus amyloliquefaciens FZB42]
GGTAAAA---AGTCAAA
>RBAM_031850(clpP) Score=0.6 Pos=-69 [Bacillus amyloliquefaciens FZB42]
TTTGACC---ATTGACC
>RBAM_001080(ctsR) Score=8.5 Pos=-38 [Bacillus amyloliquefaciens FZB42]
AGTCAAA---AGTCAAA
>RBAM_013460(clpE) Score=7.7 Pos=-85 [Bacillus amyloliquefaciens FZB42]
AATCAAA---GGTCAAA
# TF - CsoR: RBAM_030700
>RBAM_030680(copA) Score=5.4 Pos=-27 [Bacillus amyloliquefaciens FZB42]
ATACCCCCTGGGGGTTT
>RBAM_030690(copZ) Score=5.9 Pos=-44 [Bacillus amyloliquefaciens FZB42]
ATACCCTACAGGGGTAT
# TF - Btr: RBAM_002130
>RBAM_002120(feuA) Score=8.2 Pos=-97 [Bacillus amyloliquefaciens FZB42]
TCCATGG---------------TCCATGG
# TF - GlcR: RBAM_033520
>RBAM_033520(glcR) Score=8.1 Pos=-45 [Bacillus amyloliquefaciens FZB42]
ACTTATA---ACTTACA
# TF - CitT: RBAM_007790
>RBAM_007810(citM) Score=4.7 Pos=-154 [Bacillus amyloliquefaciens FZB42]
TGAACAAAATGAACGAAA
# TF - YcnK: RBAM_004210
>RBAM_004210(ycnK) Score=7.5 Pos=-110 [Bacillus amyloliquefaciens FZB42]
AACATTTT--CACATATT
>RBAM_004210(ycnK) Score=8.2 Pos=-108 [Bacillus amyloliquefaciens FZB42]
CATTTTTT--CATATTTT
# TF - AraR: RBAM_031330
>RBAM_025570(xsa) Score=5.6 Pos=-169 [Bacillus amyloliquefaciens FZB42]
TAATTGGTTCGTACAAATTA
>RBAM_025860(araA) Score=5.3 Pos=-57 [Bacillus amyloliquefaciens FZB42]
ATATTCGTACGTATATTTTT
>RBAM_031330(araR) Score=5.6 Pos=-167 [Bacillus amyloliquefaciens FZB42]
ACATTTGTACGTACTTATGA
>RBAM_031330(araR) Score=5.4 Pos=-124 [Bacillus amyloliquefaciens FZB42]
AAATTAGTACGCACAAATAA
>RBAM_025860(araA) Score=5.8 Pos=-99 [Bacillus amyloliquefaciens FZB42]
AAAATTGTTCGTACAAATAA
>RBAM_025870(abnA) Score=5.2 Pos=-105 [Bacillus amyloliquefaciens FZB42]
TTTTTTGTCTGTACAAATAT
>RBAM_031320(araE) Score=5.4 Pos=-152 [Bacillus amyloliquefaciens FZB42]
TTATTTGTGCGTACTAATTT
>RBAM_031320(araE) Score=5.6 Pos=-109 [Bacillus amyloliquefaciens FZB42]
TCATAAGTACGTACAAATGT
# TF - DctR: RBAM_004790
>RBAM_004800(dctA) Score=4.3 Pos=-105 [Bacillus amyloliquefaciens FZB42]
AGACCAAAAAGACCAAAATGTCCGTTATGATCATAA
# TF - AnsR: RBAM_021720
>RBAM_021720(ansR) Score=-1.2 Pos=-135 [Bacillus amyloliquefaciens FZB42]
TTCGCTTTTCGCAT
>RBAM_021710(ansA) Score=7.5 Pos=-55 [Bacillus amyloliquefaciens FZB42]
ATGCGAAAAGCGAA
# TF - YczG: RBAM_004130
>RBAM_004130(yczG) Score=6.5 Pos=-108 [Bacillus amyloliquefaciens FZB42]
GTTCGAATATTATCGAAC
>RBAM_004120(ycnE) Score=6.5 Pos=-51 [Bacillus amyloliquefaciens FZB42]
GTTCGATAATATTCGAAC
# TF - YfmP: RBAM_007640
>RBAM_007640(yfmP) Score=6.9 Pos=-69 [Bacillus amyloliquefaciens FZB42]
AAGTTTACGTTTACGTTAAGGT
# TF - YtcD: RBAM_026070
>RBAM_026080(ytbD) Score=6.1 Pos=-135 [Bacillus amyloliquefaciens FZB42]
AAAAGTACGTTCTTTT
>RBAM_026070(ytcD) Score=6.1 Pos=-64 [Bacillus amyloliquefaciens FZB42]
AAAAGAACGTACTTTT
# TF - HxlR: RBAM_003640
>RBAM_003630(hxlA) Score=5.6 Pos=-72 [Bacillus amyloliquefaciens FZB42]
AAAGTGCGTACTTC
# TF - YybR/YdeP: RBAM_037620
>RBAM_008000(yfkO) Score=5.5 Pos=-100 [Bacillus amyloliquefaciens FZB42]
CAGTATCAAAATGAATACTA
>RBAM_037630(ppaC) Score=6 Pos=-193 [Bacillus amyloliquefaciens FZB42]
TAGTACCTTTTTTGATACTA
>RBAM_037620(yybR) Score=6 Pos=-33 [Bacillus amyloliquefaciens FZB42]
TAGTATCAAAAAAGGTACTA
# TF - YodB/CatR: RBAM_030960, RBAM_019300
>RBAM_011500(spxA) Score=4.6 Pos=-105 [Bacillus amyloliquefaciens FZB42]
ACTTACTTTTTTATAGT
>RBAM_019300(yodB) Score=5.3 Pos=-80 [Bacillus amyloliquefaciens FZB42]
GCTTACTAAATGTAACT
>RBAM_008420(catD) Score=5.5 Pos=-42 [Bacillus amyloliquefaciens FZB42]
GCTTACATAAAGTAAGT
>RBAM_019310(yodC) Score=5.3 Pos=-63 [Bacillus amyloliquefaciens FZB42]
AGTTACATTTAGTAAGC
# TF - PadR: RBAM_008450
>RBAM_031740(yveG) Score=7.1 Pos=-95 [Bacillus amyloliquefaciens FZB42]
AAACGTGTAAATAGTTACATGTTT
# TF - YybA: RBAM_037790
>RBAM_031720(paiA) Score=7 Pos=-105 [Bacillus amyloliquefaciens FZB42]
TTTATGTTGCAAATACAACAAAAT
>RBAM_031720(paiA) Score=6.5 Pos=-58 [Bacillus amyloliquefaciens FZB42]
TTTTCATTGCAAATACAACAAAAA
>RBAM_037790(yybA) Score=6.9 Pos=-44 [Bacillus amyloliquefaciens FZB42]
ATTATATTGCATATGCAACAAAAA
>RBAM_037800(yyaT) Score=6.9 Pos=-100 [Bacillus amyloliquefaciens FZB42]
TTTTTGTTGCATATGCAATATAAT
>RBAM_031710(yyaS) Score=7 Pos=-46 [Bacillus amyloliquefaciens FZB42]
ATTTTGTTGTATTTGCAACATAAA
>RBAM_031710(yyaS) Score=6.5 Pos=-93 [Bacillus amyloliquefaciens FZB42]
TTTTTGTTGTATTTGCAATGAAAA
# TF - BsdA: RBAM_003790
>RBAM_003790(bsdA) Score=6.2 Pos=-36 [Bacillus amyloliquefaciens FZB42]
ATACCTTAAAGGTAT
>RBAM_003800(bsdB) Score=6.2 Pos=-64 [Bacillus amyloliquefaciens FZB42]
ATACCTTTAAGGTAT
# TF - GbsR (YuaC): RBAM_028170
>RBAM_028160(gbsA) Score=6.2 Pos=-47 [Bacillus amyloliquefaciens FZB42]
ATTAAATTTTTATTTAAC
# TF - YhgD: RBAM_010380
>RBAM_010380(yhgD) Score=5.8 Pos=-42 [Bacillus amyloliquefaciens FZB42]
TGACTAAAACGTTCAAACGGTCA
>RBAM_010390(yhgE) Score=5.8 Pos=-46 [Bacillus amyloliquefaciens FZB42]
TGACCGTTTTGTCAAATGAGTCA
# RNA - FMN
>RBAM_021420(ribD) Score=114.5 Pos=-133 [Bacillus amyloliquefaciens FZB42]
AGAGAAGCTATGCAAAAAATAAACTTACTGTATAGTCTTATTTCCTATGGATTAAAACTGGCAAAGCCCCGAACTGTGTAAACATTCGGGGCTTTTTTGACGCCAAATTGCGTGGAAGAAGGGAGGGATAACGATGGAAGAATATTAT
>RBAM_021200(ribU) Score=125.3 Pos=-149 [Bacillus amyloliquefaciens FZB42]
AGGTTCAGCAGACGTTTTGATGCTTATATCAAACGTTTCTTTGCCAAGCCTTAGTAAGCTCCCGCTTTTTAACAAAAGCGGTTTTTTTATTGGGGCGCAAAAGAACCTTTCCTCTTTTCGAGAGATTTGATCGAAA
# RNA - TPP
>RBAM_013090(ykoE) Score=80.8 Pos=-294 [Bacillus amyloliquefaciens FZB42]
GGAAACGCACTAGGGGTGCTGTTATCGGCTGAGATAAAACATGCGGCAGGCGTGTTTTGATCCCTTATAACCCGATCTGGATAATACCAGCGTGGGGAAGTGCAGATTGACCGGA
>RBAM_011660(tenA) Score=80.3 Pos=-192 [Bacillus amyloliquefaciens FZB42]
ATGACCACTAGGGGTGTCCTTCATAAGGGCTGAGATAAAAGTGAGACTTTTAGACCCTCATAACTTGAACAGGTTCAGACCTGCGTAGGGAAGTGGAGCGGTATTTTTTT
>RBAM_015180(ylmB) Score=68.4 Pos=-181 [Bacillus amyloliquefaciens FZB42]
ATTCACCCTGGGGGTGCTGCCATGCGGCTGAGAGAGACGTTTGTCTCAACCCTTAACGGACCTGATCCGGATCATGCCGGCGGAGGGAAGCGGTGAAAAAAGCGGAG
>RBAM_009060(thiC) Score=82.3 Pos=-231 [Bacillus amyloliquefaciens FZB42]
ATAGTTACTGGGGGTGCCCGTCTGAGCGGGCTGAGAGAGAAGCGGCGGCTTCTTAACCCTTTGGACCTGATCTGGTTCGTACCAGCGTGGGGAAGTAAAGGTTTTATTATTG
>RBAM_028100(thiT) Score=62.6 Pos=-200 [Bacillus amyloliquefaciens FZB42]
ATGACCACAAGGGGAGCATTAAAGCTGAGAGTGAACGTTTTGTTCTGACCCTTTGAACCTGTTAGTTAACGCTGGCGTAGGGATGTGGCAAAGCCAAATGAT
>RBAM_005680 Score=80.9 Pos=-180 [Bacillus amyloliquefaciens FZB42]
AAAGTCACTAGGGGAGCTTTAATAGCTGAGAAGAGACAATACGTCCTGACCCTTTGAACCTGATTTGGTTAATACCAGCGTAGGGAAGTGAAAAATTAGAGAGAT
# RNA - PreQ1
>RBAM_013490(queC) Score=44 Pos=-53 [Bacillus amyloliquefaciens FZB42]
CGGGAGAGGTTCTAGCTACACCCTCTATAAAAAACTAAGGACGAGC
# RNA - SAM
>RBAM_018760(yoaD) Score=84.3 Pos=-215 [Bacillus amyloliquefaciens FZB42]
TTTTCTATCCAGAGAGGTGGAGGGACTGGCCCTACGAAACCTCGGCAACATTTATTGTGCCAATTCCAGCAAGCGTATGCTTGAAAGATAGGAA
>RBAM_013040(metE) Score=68.3 Pos=-239 [Bacillus amyloliquefaciens FZB42]
TCTCTTATCGAGAGTTGGGCGAGGGATTGGCCTTTTGACCCCAACAGCAACCGACCGTAATTCCATTGTGAAATGGGGCGCGTGATTTTTGCGCCGAGACGACTGTCTCATAAGGCACGGTGCTAATTCCATCAGACGTGATCTGAGAGATAAGAG
>RBAM_036120(metE2) Score=78.2 Pos=-164 [Bacillus amyloliquefaciens FZB42]
CCTTATCAAGAGAGGTGGAGGGACTGGCCCTATGATACCCGGCAACCGCTGTTCAGCAGAATGGTGCTAAATCCTGAAGATAAGGTTG
>RBAM_015400(cysH) Score=74.1 Pos=-230 [Bacillus amyloliquefaciens FZB42]
GCTTATCAAGAGCGGCTGAGGGACTGGACCGATGACGCCCGGCAACCTGCGTGTATTGCAAGGTGCCGCATCCAGAAAAATGCACAGCATTTTGAAGATAAGGGCT
>RBAM_013370(mtnW) Score=82.3 Pos=-153 [Bacillus amyloliquefaciens FZB42]
TCTTATCAAGAGCAGGCAGAGGGACGAGCCCGATGAAGCCCGGCAACCGACTGATAAAGCACGGTGCTAATTCTTGCAGCAGGAGCTGAGAGATAAGATTC
>RBAM_013340(mtnK) Score=69.2 Pos=-265 [Bacillus amyloliquefaciens FZB42]
TCTCTTATCGAGAGTTGGGCGAGGGATTGGCCTTTTGACCCCAACAGCAACCGACCGTAATTCCATTGTGAAATGGGGCGCGTACATTTTGCGCCGAGACGATTGTCTCATAAGGCACGGTGCTAATTCCATCAGATGTTATCTGAGAGATAAGAG
>RBAM_027570(metK) Score=73 Pos=-310 [Bacillus amyloliquefaciens FZB42]
ACTCTTATCCCGAGCTGGCGGAGGGACAGGCCCGATGAAGCCCAGCAACCGGTTTCTCTGTAAAAAAGCAGGTGAAAACACTGTGGGAAACCAAGGTGCTAACCTGATGCAAGGTTTAATATTTTCCTTGAGCGATAAGAG
>RBAM_029830(metN) Score=94.3 Pos=-213 [Bacillus amyloliquefaciens FZB42]
TCTCTTATCAAGAGAGGTGGAGGGAAGTGCCCTATGAAGCCCGGCAACCATCAACAATGTTGAAATGGTGCCAATTCACTCGAAGCGGTCTGCTTTGAAAGATGAGAG
>RBAM_011930(metI) Score=89.9 Pos=-194 [Bacillus amyloliquefaciens FZB42]
TCTTATCACGAGAGGTGGAGGGACTGGCCCTTTGAAACCTCAGCAACCGGTTTGCTTTGCCGCGGGAAGGCAAAGTGCCAAGGTGCTAAATCCAGCAAGCGATTCACATGCTTGGAAGATAAGAGGA
>RBAM_011020(metF) Score=92.7 Pos=-212 [Bacillus amyloliquefaciens FZB42]
GTTCTTATCAAGAGAAGCCGAGGGACTGGCCCGACGACGCTTCAGCAACCGGTGTAGTGGTTTACCCAAACCATGACCAAGGTGCTAAATCCAGCAAGCTAAAAACAGCTTGGAAGATAAGAA
# RNA - Lysine
>RBAM_025540(lysC) Score=138.9 Pos=-306 [Bacillus amyloliquefaciens FZB42]
TGGTGAAGATAGAGGTGCGAACTTCAATAGTAAGCCTTTGGAGAATGATGGATTCTGCGAAAAAGGCTGAAAGGGGAGCGTCGCCGAAGTGTATCACATCCCATCGGTGTGATTCGCTGGCCTTGCATTAAATAAATGTAAGGCTGTCAAGAATTCATTTTCTTGGAGGGCTATCTCGTTG
>RBAM_030450(yvsH) Score=107.6 Pos=-292 [Bacillus amyloliquefaciens FZB42]
TCGGTGAGGTAGAGGTTGCGCTTGATGATGAGTCGCACATGCCAGGCTGATAGGGGCCGCAAAACATGTGTTAAAGGCATCAGCGCCGAAGTGTAAAGAAAGCCGATCCTTCTTTATGCTGGGACTGTATCTGAATAAGTGCAGGACTGCCGCGTGCTTTTTCGCGGAGGGCTATCCGGAGA
# RNA - Glycine
>RBAM_022890(gcvT) Score=24.8 Pos=-176 [Bacillus amyloliquefaciens FZB42]
ACTCTGGAGAGTGTCTGCACTTAGAAGCAGCAGACCACCAAAGGGGACGTCTTTATGATATGTTCATAAAGTAAACTTTCAGGTGCCGGGACAGAG
>RBAM_022890(gcvT) Score=61.2 Pos=-280 [Bacillus amyloliquefaciens FZB42]
AATGACAGCAAGGGGAGAGACTCGGACGAAAGATGGGCGTCCGGGCGCCGAAGGAGCAAACTGCGGAGTGAATCTCTCAGGCAAAAGAACTCTTGCTCGACG
>RBAM_036990(ydgF) Score=51.6 Pos=-227 [Bacillus amyloliquefaciens FZB42]
AGGAGCGGCTTCTGGAGAGACCGCGGGTTTTCCGCGGCGCCGAAGGGTTCACAATCTCAGGCAAAAGGACAGAAGAGTACCG
# RNA - Purine
>RBAM_006840(purE) Score=82.5 Pos=-233 [Bacillus amyloliquefaciens FZB42]
ATGAAATCAAAACACGACCTCATATAATCTTGGGAATATGGCCCATAAGTTTCTACCCGGCTGCCGTAAACGGCCGGACTATGCAGGAAAGTGATAAACAGCT
>RBAM_036140(nupG) Score=68.4 Pos=-239 [Bacillus amyloliquefaciens FZB42]
TCATGTAATATCGTTATTCTTGTATATGATCAGTAATATGGTCTGATTGTTTCTACCTAGTGCCGTAAAAGACTAGACTACAAGAAAGTTTGCATAAATTTG
>RBAM_006160(pbuE) Score=60.6 Pos=-155 [Bacillus amyloliquefaciens FZB42]
CACAACCGAATATTGCATACATTGTATAACCTCAATGATATGGTTTGAGGGTGTCTACCAGGAACCGTAAAATCCTGATTACAAAAATTGTCCCGTAC
>RBAM_020260(xpt) Score=79.7 Pos=-200 [Bacillus amyloliquefaciens FZB42]
TGATTAATATCATACGAACACTCATATAATCGCGTGGATATGGCACGCAAGTTTCTACCGGTCACCGTAAATGTCCGACTATGAGTGAGCAATGGAACGGC
>RBAM_006790(pbuG) Score=82.3 Pos=-233 [Bacillus amyloliquefaciens FZB42]
AGAAATCAAATATGCAGATATCGTATAATGGCGGGGATATGGCCCGCAAGTTTCTACCAAGCTACCGTAAATGGCTTGACTACGGATCAATCTCAATCGTTTGA
# RNA - glmS
>RBAM_002320(glmS) Score=131.7 Pos=-260 [Bacillus amyloliquefaciens FZB42]
TTATAATTACAGCGCCCGAACTAAGCGCCCGAAAAACGGCTTAGTTGACGAGGATGGAGGTTATCGAATTTTCGGCGGATGCCTCCCGGCTGATTCATTTAGATCACAGCCGTAAGGATTTCTTCAAACCGGAGGGGCGACTCTCCGAACAAAGAGAAATCACATGATCTTCC
# RNA - PyrR
>RBAM_015300(pyrR) Score=64.5 Pos=-147 [Bacillus amyloliquefaciens FZB42]
GATTCTTTAACACAGTCCAGAGAGGCTGAGAAGGATAACGGATAGGACAGAAGAGATACGCATGTGTCTTCGTCCTGGAAAGGAACCCCTCTATGCTCTGGCAGGAGGGGTTTTTTCTTCT
>RBAM_015310(pyrP) Score=53.8 Pos=-151 [Bacillus amyloliquefaciens FZB42]
CCCTTTTTAAATGCATTCCAGAGAGTTTGCAAAGAGGATTTTAAAACACAAAGCCGGGCGGATCGACGCGGCCGGGTTTTGTATGCCTCTTTGCGCAAAAAGCAAAGAGGTTTTTTTATACC
>RBAM_015320(pyrB) Score=72.2 Pos=-141 [Bacillus amyloliquefaciens FZB42]
AAACCTTTTAAAGAAAGTCCAGAGAGGCTTGGAAGGGTTATAACGGGAAGAAGCTGTACCTGCTTCTCTCTTTAACCGCACCCCGAGTCTATAGACCGGGGTGTTTTTTACGG
# RNA - ykoK
>RBAM_013120(mgtE) Score=146.4 Pos=-399 [Bacillus amyloliquefaciens FZB42]
AAGAACTTCGTTAGGTGAGGCTCCTGTATGGAGATACGCTGCTGCCCAAAAATGTCCAAAGACGCCAATGGGTCAACAGGAATCATCGACATAAGGTGATTCTTAACGCAGCTGGATGGCTGTCCTATGCCATACAGTGCTAAAGCTCTACGATTGGAGGCCCCGCA
# RNA - ylbH
>RBAM_014870(ylbH) Score=123.2 Pos=-302 [Bacillus amyloliquefaciens FZB42]
TAAAAAAATCCCCGCAGATACCTGCGGGGTCCTTCTATTCCTTAACAAGTTAAGGAGAAGGAAAAGGGAGAGGAGAAACCGGAGGAAGAACTTATGGGGAAACGTAAGTCTTCTCCGCGGTT
# RNA - yybP-ykoY
>RBAM_013210(ykoY) Score=82.7 Pos=-167 [Bacillus amyloliquefaciens FZB42]
GAAATCCCAAAGGGGAGTAGCGTCCGGATATTCCGGAAACAAAGTCGTCAATTCATGGATCATATCCATCGGCTTTGTTGGCATGCCAATCATTCATGTCTAGCAAGACCTTTGCCTTATATCG
# RNA - ydaO-yuaA
>RBAM_004540(ydaO) Score=102.7 Pos=-299 [Bacillus amyloliquefaciens FZB42]
AATCTATATCGCTTAATCTGTAATCAGAGCGGGGGAACCAATTTGCGGCGGATGCCGCTTGGGGTGAATCCTTTTTCAGGTAGGGCCAACTCTCATCAGCCCGAATCCGACAGCTAACCTCGTAAGCGTTCATGAGAGGAGATGA
# RNA - ykkC-yxkD
>RBAM_012900(ykkC) Score=90.8 Pos=-174 [Bacillus amyloliquefaciens FZB42]
GACATGTTTTCTAGGGTTCCGCATGTTCATACATGGCCTGGTCCGAGAGAAAACACATATGCGGACATATCCCGCATATGCACACGGAGGGAAAAAAGCCCGGGAGAGTC
>RBAM_036060(yxkD) Score=82.7 Pos=-168 [Bacillus amyloliquefaciens FZB42]
AACAGTGGTTTTCTAGGGTTCCGCAATGCTGAATTGGTCTGGACCGAGAGAAAACACACAGCAGGTTCCTGCTGTGACACGTTGGGATAAAAGCCCGGGAGTT
# RNA - L10_leader
>RBAM_001290(rplJ) Score=94.1 Pos=-205 [Bacillus amyloliquefaciens FZB42]
ATAATATGTCATTTATACCGTAGACAGCAGGGGCCGTTAAGGCTTAATATCCTGCCGAGGTGTATATATATCACAGCTATTACGTTACGTATGCTTGTATATACAGCCTCCATGTCCACATGGAGGCTTTTTATATGAAATCGT
# RNA - L13_leader
>RBAM_001740(rplM) Score=55.8 Pos=-104 [Bacillus amyloliquefaciens FZB42]
GTATGTATTTCAACCCCACGATAAGCCCCGGAACTTATTGTGTTGTGAAATAGAACGT
# RNA - L19_leader
>RBAM_015870(rplS) Score=39.3 Pos=-61 [Bacillus amyloliquefaciens FZB42]
CGATGTTCCGCTGTGCCTTGCAGTTGTGGCCAAGAGCATCTGTT
# RNA - L20_leader
>RBAM_025930(infC) Score=81 Pos=-208 [Bacillus amyloliquefaciens FZB42]
AAATCACAAGCAGAGGCACCCGCTTCTCACCTGATTGACACATTCATGTAGTTGGCAGGTTGACCGTACATTTTTATTTATGCAGATGTTCGTAGTGTGGGTGTGTTGTCATGCCCGCACTTTTTGTTTGCC
# RNA - L21_leader
>RBAM_025010(rplU) Score=56.8 Pos=-88 [Bacillus amyloliquefaciens FZB42]
ACCAATGCTACAACCGCTCGGGACAGGTGATAAGAGCTTTAAAGCCCCCTGTTGCTGGCGAGTCTTAGTCTAATA
# RNA - T-box(Ala)
>RBAM_024510(alaS) Score=91.1 Pos=-289 [Bacillus amyloliquefaciens FZB42]
CGAATCTCGAGTGACGGATATGAGTACGCCGAAGCCCTGTTTAAGAGAGAAGCTCCGATACGCTGAAAGGAGCTTCAGCAGAAGATCGGCCGAAGCTAATCCTGAGTGCAGTTAAAGGCTGCCGCAGTCCTGCGTTACGGGATGAAAGGTGACAGGCCTTTTTCGGCCTGTAATCAGGGTGGTACCGCGAGACAGCTCTCGTCCCTGTG
# RNA - T-box(Asn)
>RBAM_024670(hisS) Score=99.1 Pos=-297 [Bacillus amyloliquefaciens FZB42]
TTTTGAACCGATAATGGAGAAGAGTAGGTCAGAATGCATGGAGAAGAGAGGAACCGTCCCGGGCTGAAAGCGGATCCGCACTGCATCTTTCTCGAAACAACACTCCGGAGGTTCCCTGCTGAACGCTTTTGCAAGTCATTAGGCAGCGGACGTGAACCTGCGTTAAAGGTCAGAGCGGGGATGCTTCGGCATTCCAACTAGGGTGGCACCACGGGTATAACTCTCGTCCCTACT
# RNA - T-box(Cys)
>RBAM_001180(cysE) Score=104.6 Pos=-307 [Bacillus amyloliquefaciens FZB42]
TACGATTGTTGACAGGGAAGAGTATAAAACAATGACCATTACAGAAAGAATCTTCATCGGCTGAGAGAGATTCATGCGTCATGTTTTAGAAGTGCGCCCTTAAGACCTTTGAAGAACATTTCTGCGGAAATCAGTATTTAAAGGCGGCCGCCGCCGTTACCGGCTTTTAAGTTGGGAAAACAGTGACTTGTTTTTCAAACAGAGTGGAACCGCGCGGTAAAAGCGTCTCTGTCAT
# RNA - T-box(Gly)
>RBAM_023570(glyQ) Score=87 Pos=-263 [Bacillus amyloliquefaciens FZB42]
ATATGTTGCAGTGACAGAAAGAAGTACTTGCGTCCAACTCATACAAGCGACCTTAGGGCAGTGTAAGCTAAGGATGAGCGCGCAACGAAAGGCATTCTCGAGCAACCCTTTAAAAAGAGGCTGAGTGATTCACATCCTCAGCAACTAGGGTGGAACCGCGGGAGAACTCTCGTCCCTATG
# RNA - T-box(Ile)
>RBAM_015260(ileS) Score=97.2 Pos=-280 [Bacillus amyloliquefaciens FZB42]
AAAAGACGATTGAAAGGGACCGGCATGACTCAAAACAGGCTATAAAGCGACCCGGGGAAGGTGAAAGCCCGGGATGGCCGGAATCATGCAGATCAGCCCTTTAGTTTCCTTTCTGAACCGAGAGTAGGAAAGGACGTTCCATCACGTTACGATGTTCGAGAGGAAAAGACGGATGATCCGTTTTTTCTAAAAGGGTGGTACCGCGAGATAAGCTTTCTCGTCCCTTATGG
# RNA - T-box(Leu)
>RBAM_027250(leuS) Score=132.7 Pos=-323 [Bacillus amyloliquefaciens FZB42]
GATAAGAACAGTGAAGAGGAGCAGTAAGAAGCAGATTTTGCAATCAGAGAGTTGACGGCCGGTGCAAGTCAATCAAGTCTGTTTCCGAACTCGCCTCAGAGTTGCAGCGGCAAAACCGCTGACGCATAACTGCGTTAAAAGTATCAAGTGAGTGCGGCTCAAAACCGCGCTAACGAGGGTGGTACCGCGGGAAATAAAAATCTCTCGTCCCTTTT
>RBAM_025370(ilvB) Score=118.6 Pos=-303 [Bacillus amyloliquefaciens FZB42]
ATAAAAAGCGCAGAAGAGGATAAGTAGCTTTGCTGAAGTTTTTCACAGAGAGCCGGTAACGCTGAGAGCCGGTAAAACAAATCAAAGTGAACTCCCCTCAGAGTGCCGGTCTGAAATGTAAAGAGTAGGACTCGGCCGAGTGAACGCAATGTTTACTCGTTATCAAAACGGATAATCATTATCCATGAGACGGTCTGCATATGACCGTAAACAAGGGTGGTACCGCGGAGAGCAAAGCCTTTTCGCCCCTTTT
>RBAM_031370(yvbW) Score=106.9 Pos=-302 [Bacillus amyloliquefaciens FZB42]
ATAAAACACTGTGAACGGGAGCAGTAAAAGAATCCAGTCAGAAAAAGAGAGCCGCGGGTTGGTGCAACGCGGACTGATTGTTCTTTGAACTCGCCCGGAAGTGGCAGGGCGGAACGGAATTGTCGAAATATTCCCTATGTCCTAACGGCTGACCTTCGTTAAAAGGTTTTTAAGCTGGATTCCGGACATTCGGGATCAACAAGAGTGGTACCGCGGCTGCCTGAGGCACGCCGTCTCTTTT
# RNA - T-box(Lys)
>RBAM_024030(lysX) Score=85.6 Pos=-278 [Bacillus amyloliquefaciens FZB42]
CCGAAAAGCGCTGAAGAGACGAGTAGACAGATATCATTCATGACAGAGAGCTCCGGGAGCTGTGAAGGAGTATGAATGGATGTGTTGAAACAAACCTCTTAGCTTCGCATCGGAATCATGCAACACGACGATGATGCGGCGGATACTCCTGTTACCGAGTAAGCTTTGTACCCGGCAAGGCCGGCACCAAACCGAATTGAGGTGGCATAGCGGGCTGTTTCCCGTCCTCAAG
# RNA - T-box(Phe)
>RBAM_025710(pheS) Score=62.4 Pos=-316 [Bacillus amyloliquefaciens FZB42]
TGTAAAAACCGTGACAGAGGACGTCAATTTTTGCACACACTGCCTTCCAGGGAGAAAATGCCGCTGACTGAAAGCATTTTTATCGCAGCACAAAAATTGATTTTCACCTCTCGAGTTGTCACCGGGACCGCGCCAAACGCGCGTAAAGGTGAACCGGAACGATCGTTTCCGTTATGTCAATGAAGCTGTCGGCAGATGAAGTCTGCCTTAAAAAGGGTGGTACCGCGGCCACAACTCGTCCCTTCT
# RNA - T-box(Pro)
>RBAM_012930(proB) Score=93.2 Pos=-282 [Bacillus amyloliquefaciens FZB42]
ATTGAGCGTTGAAGAGGATCAGTACGCAGAACTTTCTGTGACAGAGAGCAAAATGGCCCGCTGAAACATTTTGCCGCATGAAACCTGCCGAACCTGCCTTGGAGTCCTGAGGGGAAAACTCAGGCGCGATAACCTGGCGTTACAGGAAAGCGGGACGCGTGAAAAACGCGTTCAAACAAGGTGGTACCACGGAAAGCCCATTTCGTCCTTATTTT
>RBAM_021930(proI) Score=86.8 Pos=-252 [Bacillus amyloliquefaciens FZB42]
GGAACGCGATGACGAGGAACTAGTATATAAACAACGGCAGCAGAGAGCAATGTCCCCGGCTGAAAGACATTGCGGCCCTCTTGTTTACAGAACCTGCCCTCAGAGCGGTTAGGAAAACCTAAACGTATCCCCTCGTTACGGGATTTGAGCTGAGCACGGCTGATTCGTGCTAATGTAAGGTGGTACCGCGAAACCTTTTCGTCCTTTTTGA
# RNA - T-box(Ser)
>RBAM_000160(serS) Score=125.9 Pos=-266 [Bacillus amyloliquefaciens FZB42]
GAAAAGCGTTGACAGGAAGCAGTAGGGGGCCCCTCTTTCAAAGAGAGCCGATGGGTGGTGCGAATCGGTGAAAGATGCTGTCCGAATCCGTCCTTGAGCGAAATGCTGAAACCAAGTAGGCATTTACGGGAAAACCGTTATGTGTTAAAGCGGGAAGCAAGTGTGAGCTTGTTTTCAATCAGGGTGGCAACGCGAGAGCTCTCGTCCCTTTTAG
# RNA - T-box(Thr)
>RBAM_025990(thrS) Score=80.5 Pos=-299 [Bacillus amyloliquefaciens FZB42]
GCTACACGTATTGATAAGGACATGAAGCATTGATACCGGCTTTATAAGAGAGGAGAGCCCAGGCTGAAAGCTTTCCAGCTATGGATCATTGTCTTTACCGCCTTTGAACTTCAGCTGTGAACGCCGGAAGAAGCGCCAGTAATAGCTGACGGGAACTCCCGTTACAGAGTTTAGAGCCGCAGGTGCCGAAACAATCGGCCGCGCGGAAAAAAGGGTGGAACCACGATTCCGTTTATTTAACCTCGTCCCTTTC
# RNA - T-box(Trp)
>RBAM_011420(trpS) Score=120.8 Pos=-268 [Bacillus amyloliquefaciens FZB42]
TGTGATTGCGATGATGAAGAGTAGTACACATTTTCACCCGTTTGAAGAGAGTCTGCGGTGCTGGGAGCAGGTAACGGGCGATGTGGAATGGACTTCTGAGCAGCTGACCGAACGTTAGTAGGCCCAGCCGGAGCAGCCTCCGTTACCAACGTCTCGAGCGATTCCATTGTAATGGAATAATCAGGGTGGCACCACGGTTCATTCGTCCCTTTT
# RNA - T-box(Tyr)
>RBAM_026790(tyrS) Score=132.8 Pos=-284 [Bacillus amyloliquefaciens FZB42]
CGAAAAGGTTTTGATTGAGACAAGTAGGGTATCTGATTGTTCAAGAGAGCTGATGGCCGGTGAAAATCAGCACATAAGATATGCCGAATACACTCATGAACCGCTTTTGCGAACAAAGCCCTTCCAAGGCTTTCAGTAGTGAAAGAACGGACACGGTCCGTTATCAAAAAGAGTGATAAAAGCTTTTTTATGCTTTTATTAGTAGGGTGGTACCGCGATTATATCGTCCCTTCG
# RNA - T-box(Val)
>RBAM_025140(valS) Score=117.6 Pos=-281 [Bacillus amyloliquefaciens FZB42]
TACACCTGCTTTGAACGGGAAGAGTACAAGAAAGACGCATGAAGAGAGAGAAGCTACTGTGCTGAAAGGCTTCTTATGCCGTCTCATTGGAAGGTCGCCCGGGAGCATAATTTCTTGAACATACAGTAGAGAAATTCGGGCCGCACCCGTTATCCGTTTAAGTGCATGAACAAATCTGTTCATGAAAAAAGGTGGTACCGCGAAAGAGCTTTTCGTCCTTTAT
# TF - MalR: RBAM_028630
>RBAM_007730(yflS) Score=5.2 Pos=-89 [Bacillus amyloliquefaciens FZB42]
TTTTTTAATTA---------TTTATTAACTT
>RBAM_034210(ywkA) Score=-0.8 Pos=-206 [Bacillus amyloliquefaciens FZB42]
AACTTAAAAAA---------AAATTAAGTAA
# TF - YvbF/YvaV: RBAM_031060, RBAM_031110
>RBAM_031050(opuBA) Score=7.8 Pos=-111 [Bacillus amyloliquefaciens FZB42]
TAAACTTTTTAATTTACAAAGTTTA
>RBAM_031110(yvbF) Score=7 Pos=-201 [Bacillus amyloliquefaciens FZB42]
TGAAATTTGTAAAATAAAAAGTTTA
>RBAM_031050(opuCA) Score=7.8 Pos=-111 [Bacillus amyloliquefaciens FZB42]
TAAACTTTTTAATTTACAAAGTTTA
>RBAM_031060(yvaV) Score=7.8 Pos=-199 [Bacillus amyloliquefaciens FZB42]
TAAACTTTGTAAATTAAAAAGTTTA
# TF - GutR: RBAM_006530
>RBAM_006540(gutB) Score=6.8 Pos=-140 [Bacillus amyloliquefaciens FZB42]
TAAAAAGTACAGTGCGGCTGTCCTTTTAT
>RBAM_006530(gutR) Score=6.8 Pos=-89 [Bacillus amyloliquefaciens FZB42]
ATAAAAGGACAGCCGCACTGTACTTTTTA
# TF - GlnL: RBAM_002820
>RBAM_002800(glsA1) Score=8.5 Pos=-124 [Bacillus amyloliquefaciens FZB42]
TTTTGT----TTTTGT
>RBAM_002800(glsA1) Score=7.5 Pos=-114 [Bacillus amyloliquefaciens FZB42]
TTTTGT----TTCTGT
# TF - YbzH: RBAM_018560
>RBAM_018550(ybcL) Score=6.2 Pos=-56 [Bacillus amyloliquefaciens FZB42]
ATATCGATATATCACAATAT
>RBAM_018560(ybzH) Score=6.4 Pos=-30 [Bacillus amyloliquefaciens FZB42]
ATATCGTAAAATCACGATAT
# TF - PutR: RBAM_003470
>RBAM_003440(putB) Score=6.9 Pos=-59 [Bacillus amyloliquefaciens FZB42]
TTGTGGTAAAACCACAA
# TF - LiaR: RBAM_030210
>RBAM_030260(liaI) Score=5.1 Pos=-99 [Bacillus amyloliquefaciens FZB42]
ATACGACTCCGGTCTGAT
# TF - YrkD: RBAM_005420
>RBAM_005430(yrkE) Score=5.2 Pos=-40 [Bacillus amyloliquefaciens FZB42]
ATACCCCCAGGGGTAA
>RBAM_005420(yrkD) Score=5.8 Pos=-127 [Bacillus amyloliquefaciens FZB42]
ATACCTGTAAGGGTAT
>RBAM_005430(yrkE) Score=5.7 Pos=-104 [Bacillus amyloliquefaciens FZB42]
ATACCCCTACCGGTAT
# TF - LytT: RBAM_025960
>RBAM_025950(lrgA) Score=8.2 Pos=-103 [Bacillus amyloliquefaciens FZB42]
TTTTTGCATTTC---------ATTCAGCCGTTT
>RBAM_025950(lrgA) Score=9.5 Pos=-124 [Bacillus amyloliquefaciens FZB42]
CTTTTGCATTTC---------TTTTTGCATTTC
# TF - YcxD: RBAM_003730
>RBAM_003720(ycxC) Score=13.3 Pos=-107 [Bacillus amyloliquefaciens FZB42]
ATCTGTACC-(0)-GGTACAGTT-(12)-CATTGTACT
# TF - ScrR: RBAM_031840
>RBAM_031830(cscB) Score=7.3 Pos=-241 [Bacillus amyloliquefaciens FZB42]
TATGTCAACCGATTGACATA
>RBAM_031840(scrR) Score=7.3 Pos=-169 [Bacillus amyloliquefaciens FZB42]
TATGTCAATCGGTTGACATA
# TF - GntR2: RBAM_018000
>RBAM_017950(kdgK) Score=6 Pos=-53 [Bacillus amyloliquefaciens FZB42]
TTACTAAACCGGTTTACCAA
>RBAM_017950(kdgK) Score=5.7 Pos=-40 [Bacillus amyloliquefaciens FZB42]
TTACCAAACCGATTTAGTCT
# TF - PdxQ: RBAM_005770
>RBAM_005780(pdxO2) Score=12.5 Pos=-104 [Bacillus amyloliquefaciens FZB42]
CTGACAT-(16)-CTGTACC-(7)-ATGTCAG
>RBAM_005640(dapA) Score=11.6 Pos=-101 [Bacillus amyloliquefaciens FZB42]
CTGACAT-(16)-CTGTACC-(7)-ATGTCAT
# TF - YhdI/YdeL: RBAM_005860
>RBAM_005850(ydeK) Score=10.9 Pos=-111 [Bacillus amyloliquefaciens FZB42]
ACTGGCAT-(16)-ACTGGCCA-(8)-AGGCCAAT
# TF - GabR: RBAM_004140
>RBAM_004150(gabT) Score=12.5 Pos=-182 [Bacillus amyloliquefaciens FZB42]
TACCAT-(13)-TTGGTA-(10)-TACCAA