# TF - NagR: LAR_0271
>LAR_0271(nagR) Score=4.2 Pos=-82 [Lactobacillus reuteri JCM 1112]
AAATTGGTCTAGATTTTTGG
>LAR_0405(glmS) Score=4.4 Pos=-134 [Lactobacillus reuteri JCM 1112]
TAAATCATATAGACCAATCT
>LAR_0405(glmS) Score=4.4 Pos=-43 [Lactobacillus reuteri JCM 1112]
CTAGTTATCTATACCAATTT
# TF - PurR: LAR_0210
>LAR_0128(purE) Score=4.9 Pos=-102 [Lactobacillus reuteri JCM 1112]
ATACACGAACTAT
>LAR_0131(purC) Score=5.6 Pos=-153 [Lactobacillus reuteri JCM 1112]
AAACACGAACAAT
>LAR_0210(purR) Score=5.2 Pos=-64 [Lactobacillus reuteri JCM 1112]
AAATCCGAACATT
# TF - CcpA: LAR_0536
>LAR_1508(malT2) Score=4.6 Pos=-52 [Lactobacillus reuteri JCM 1112]
ATGTAAGCGTAATCAT
>LAR_1508(malT2) Score=4.2 Pos=-89 [Lactobacillus reuteri JCM 1112]
GTGCAAGCGGTTGCAA
>LAR_1453(scrT) Score=4 Pos=-190 [Lactobacillus reuteri JCM 1112]
AAAATAGCGTTATCAT
>LAR_1453(scrT) Score=4 Pos=-133 [Lactobacillus reuteri JCM 1112]
ATGTAATGGATTACAA
>LAR_0399(rbsK) Score=4.5 Pos=-76 [Lactobacillus reuteri JCM 1112]
TTGTAATCACTTTCAA
>LAR_0467(araE) Score=4.7 Pos=-63 [Lactobacillus reuteri JCM 1112]
ATGAAAGCGCGTTCAT
>LAR_0415(pgi) Score=4.4 Pos=-69 [Lactobacillus reuteri JCM 1112]
TTGAAACCGACTTCAT
>LAR_0419 Score=4.2 Pos=-144 [Lactobacillus reuteri JCM 1112]
TTGTTTCCGCTTACAT
>LAR_1640(glpF2) Score=4.7 Pos=-50 [Lactobacillus reuteri JCM 1112]
TAGAAAACGCATACAA
>LAR_1033(lacS) Score=4.7 Pos=-42 [Lactobacillus reuteri JCM 1112]
TTGTAAGCGATTACAG
>LAR_0399(rbsK) Score=4.4 Pos=-135 [Lactobacillus reuteri JCM 1112]
TGAAAAGCGATTTCAA
>LAR_0435(arcA) Score=4.7 Pos=-72 [Lactobacillus reuteri JCM 1112]
TTGACAACGTTTACAT
>LAR_1662(galK) Score=4.4 Pos=-93 [Lactobacillus reuteri JCM 1112]
TTGTAAGCGCTTATTG
>LAR_1662(galK) Score=4.5 Pos=-125 [Lactobacillus reuteri JCM 1112]
GTGTAATCGTTTTCTT
>LAR_0851(lrgA) Score=4.4 Pos=-101 [Lactobacillus reuteri JCM 1112]
GTGAAAACGAATACAA
>LAR_1448(galM) Score=4.4 Pos=-33 [Lactobacillus reuteri JCM 1112]
GTAAAAGCGCTTACTT
>LAR_0192(ndk) Score=4.6 Pos=-74 [Lactobacillus reuteri JCM 1112]
CTAAAAACGCTTTCAA
>LAR_0364(lulA) Score=4.6 Pos=-115 [Lactobacillus reuteri JCM 1112]
ATTAAATCGTTTTCAA
>LAR_0722(pyk) Score=4.4 Pos=-139 [Lactobacillus reuteri JCM 1112]
ATGATAGCGCTTTTTT
>LAR_0029(dhaT) Score=4.4 Pos=-39 [Lactobacillus reuteri JCM 1112]
ATGGAATCGTATTCAA
>LAR_0310(adhE) Score=4.8 Pos=-132 [Lactobacillus reuteri JCM 1112]
TTGTAAGCGAATTCAT
>LAR_0033(gabD) Score=4.6 Pos=-30 [Lactobacillus reuteri JCM 1112]
ATGTAAGCGTTTATTT
>LAR_0033(gabD) Score=4.1 Pos=-132 [Lactobacillus reuteri JCM 1112]
ATAAAAGGGCTTTTAT
>LAR_1256(ptsH) Score=4 Pos=-102 [Lactobacillus reuteri JCM 1112]
TATTTAACGCTTACAA
>LAR_0399(rbsK) Score=4.4 Pos=-135 [Lactobacillus reuteri JCM 1112]
TGAAAAGCGATTTCAA
>LAR_0406(lp_0827) Score=4.8 Pos=-149 [Lactobacillus reuteri JCM 1112]
ATGGAAACGCTATCAT
>LAR_1565(lplA1) Score=4.7 Pos=-104 [Lactobacillus reuteri JCM 1112]
TTGCAAACGCTTACTA
>LAR_0608(pdhA) Score=4.3 Pos=-40 [Lactobacillus reuteri JCM 1112]
AAGCAATCGCTTACAT
>LAR_0608(pdhA) Score=4.7 Pos=-90 [Lactobacillus reuteri JCM 1112]
ATGAAAGCGCTTGTAT
>LAR_0276(lacL) Score=4.4 Pos=-53 [Lactobacillus reuteri JCM 1112]
ATGAAAGCGCTATACT
>LAR_0972(agl3) Score=4.5 Pos=-66 [Lactobacillus reuteri JCM 1112]
ACGAAAACGTTTACAT
>LAR_0399(rbsK) Score=4.5 Pos=-76 [Lactobacillus reuteri JCM 1112]
TTGTAATCACTTTCAA
>LAR_0078(nplT) Score=4.9 Pos=-130 [Lactobacillus reuteri JCM 1112]
ATGTAATCGTTTACAT
>LAR_1455(arcD) Score=4.6 Pos=-65 [Lactobacillus reuteri JCM 1112]
TTGAAGCCGCTTTCAA
>LAR_1512(coaA) Score=4.6 Pos=-44 [Lactobacillus reuteri JCM 1112]
GAGTAACCGTTTTCAT
>LAR_0083(malR3) Score=5.3 Pos=-74 [Lactobacillus reuteri JCM 1112]
TTGAAAACGTTTACAA
# TF - AraR: LAR_0473
>LAR_0467(araE) Score=6.4 Pos=-103 [Lactobacillus reuteri JCM 1112]
TGATTTATCCGTACAAATAT
# RNA - L10_leader
>LAR_0302(rplJ) Score=75.6 Pos=-150 [Lactobacillus reuteri JCM 1112]
GATTAAATATGACTCTGCCTAAGACTCAGGTGGCGAAAGCCTTAATCGAATGCCTGCCGAGGAAGAAATGAAAGTTCCTTCTCTATGTCTGCGGTCATAGGGATTTTTTTATAAATCCGA
# RNA - TPP
>LAR_1494(cytX) Score=59.3 Pos=-182 [Lactobacillus reuteri JCM 1112]
TTGCATAAACGGGGAGCTTGCAGACAGGCTGAGAGGGGACTATGCGTCTCGACCCAATGAACCTGATTTGGATAATGCCAACGTAGGAAGGATTAATAAAGGACGACCAG
>LAR_1550(ykoE) Score=71.9 Pos=-156 [Lactobacillus reuteri JCM 1112]
GAATAAATCTGGGGTGCCAAACGGCTGAGATAATACCCATTGAACCTGCTCTGGTTAATACCAGCGAAGGGAGATTCAGTGATATTAACTT
>LAR_0968(thiM) Score=54.3 Pos=-162 [Lactobacillus reuteri JCM 1112]
TATTGCATTAGGGGTGCCCATAGTGCTGGGCTGAGATGTGCAGAGACGCATGGACTCTAGAACCTGTAAGTTAACGCTTGCGTAGGAAAATGCACCGAACTTTAATA
# RNA - FMN
>LAR_0824(ribD) Score=127.3 Pos=-287 [Lactobacillus reuteri JCM 1112]
ATTTTCTTCGGGGCAGGGTGAAATTCCCAACCGACGGTAACAAGTACGCTTGGAGTCCGTGACCCGTTAGCATTTATGTTAACGGTTGAACCAGTGAAAATCTGGTACCGACAGTATAGTCTGGATGGGAGAAGAAAACTAA
# RNA - PyrR
>LAR_0117(pyrB) Score=59.6 Pos=-292 [Lactobacillus reuteri JCM 1112]
ATACCTTTAACTTAGTCCCGTGAGGCTAGGAAGGATTTAATTGAGCGTTTAAGTACACCTTCTTAGCTATTGCTGAGAAGGTTTTTCTTTTAA
>LAR_0247(codB) Score=47.8 Pos=-140 [Lactobacillus reuteri JCM 1112]
GTTCTTTTAATGTAGCCCAGAGAGACTACAAAAGACAAAATAATATAAGCATAGTGGGCACAAAACTATGCTTCCTCTTTTGTAAAGCTCTAGGACCATTAAAGGGACTAGAGCTTTTTTAGGTC
>LAR_0117(pyrB) Score=40 Pos=-148 [Lactobacillus reuteri JCM 1112]
CGACCATTTAATTGTTTCCAGAGAGAGCAGAACGGTATGTTGTTTTTAGCCTACTTATATCCTAAAAGCAAACAGTGATGACTCTCGAAATTTAAATGGGAAGTTATCACTGTTTTGT
>LAR_0081(carA) Score=49.9 Pos=-198 [Lactobacillus reuteri JCM 1112]
ATTATCCTTTAATTTGGTCCCGTGAGGCTAACAAGGGCAGCGTTGTATTACTAACATTGAATCATACATATATATTCAATTTTTCGTATACGCTTAAGCCCATTACCAATGGTTTAAGCGTTTTTTAT
>LAR_0450(pyrP) Score=57.8 Pos=-94 [Lactobacillus reuteri JCM 1112]
AGACCTTTAATCGGAGTCCTGTGAGGCTTCAAAGGTGCGGATAAATTCTCAATACTCTTTCCATAGTTAGGATTGGGCAGAGGAAGAGACGACTTTGGAGCAGGGATTCCAAGGTCGTTTTTTCTTTA
# RNA - L13_leader
>LAR_1362(rplM) Score=19.9 Pos=-74 [Lactobacillus reuteri JCM 1112]
TGGTATTTCTTTTCCATCTAATAACTCGGTACACTATTATATGTAAAAGAAAAAC
# RNA - L19_leader
>LAR_1082(rplS) Score=30.4 Pos=-61 [Lactobacillus reuteri JCM 1112]
AACGGTATTCCGCTGCCCGTCATACAGGACATGAATGTCGG
# RNA - L20_leader
>LAR_1175(infC) Score=57.8 Pos=-180 [Lactobacillus reuteri JCM 1112]
AAAGAAAAAGCAGAAGCACCCGCTTCTCGCCTAGGTGGTATTGATCGCCGGGCTGACGAGATGAATGATAATCGACCACTAGGATAAGGTCGTTGTTATGAAGCGGGGTACTTTTGTGCCTCGCTTTTTTGCTTGATC
# RNA - L21_leader
>LAR_1124(rplU) Score=50.6 Pos=-89 [Lactobacillus reuteri JCM 1112]
CCAACAACTACAACCGCACGTTATTAAGTCTAAAGCTTATTTAGCTGCTTAGTACGGCGAGTCTGAGATATTAA
# RNA - Lysine
>LAR_0592(lysA) Score=95.3 Pos=-272 [Lactobacillus reuteri JCM 1112]
TAAATCGAAGAGGCGCAACCGACACTAGTAAACTAATTTAGTTCGCCAAGACATTGAGGTTAGTTGAACAGGGAAGTTGCCGAAGCGCTTAGTTTGGCATATTAAGCAGCTGGGTCGTAGTTGAATAAGCTACGGACTGTCGCAGGACAATAAGAGCCTGCGTTGCGCTATCGACAAATC
>LAR_1410(lysP) Score=101.9 Pos=-303 [Lactobacillus reuteri JCM 1112]
CATTCGATGAAGAGGTTGCATATTTTATTAGTAACTGATATTAGGTGAATAAGCACCGGAGTATTAGTGAAAGGGAAATATGCCGAAACACTACTTAGCTTATTTCTGGTAGGTGTTGGGCTATAGTCATAATAGGCTATAGACTGTCGCAATAATTGCGGGGCGCTTCCTAAATT
# RNA - Purine
>LAR_1713(pbuX) Score=65.3 Pos=-187 [Lactobacillus reuteri JCM 1112]
ACTACATCAAATAAATAGCCTATATAATACCGAAATATGGTCGGTTAGTCTCTACCTAAAGCCGTAAACTTTAGACTATAAGCGCTTCTTAAAAACTGAC
# RNA - S15
>LAR_0625(rpsO) Score=15.9 Pos=-75 [Lactobacillus reuteri JCM 1112]
TTCTCAGTTTAACGATCCTCACCGACGTTATACTTAGATCTTAGGCGCATTAATATTGAAAGGTGGGAAAATAGCATGGCTATTTCAAAAGAACGTAAAGATCAAATTATTAAGGAATTCGCAACTCACGAAGG
# TF - Rex: LAR_0341
>LAR_0310(adhE) Score=4.4 Pos=-238 [Lactobacillus reuteri JCM 1112]
TTGTGAAATAGACTTCAA
>LAR_0310(adhE) Score=5.1 Pos=-104 [Lactobacillus reuteri JCM 1112]
TTGTTTAAATGTTCACAA
>LAR_1724(gldA) Score=4.8 Pos=-38 [Lactobacillus reuteri JCM 1112]
TTGTTAACTTATACACAA
>LAR_0064(noxE) Score=5.1 Pos=-245 [Lactobacillus reuteri JCM 1112]
TTGTGAGTAATTTTACAA
>LAR_0064(noxE) Score=4.6 Pos=-35 [Lactobacillus reuteri JCM 1112]
TTGTGAAAATCAGAACAT
>LAR_0341(rex) Score=4.7 Pos=-157 [Lactobacillus reuteri JCM 1112]
TTGTATTTTAGTTCACAA
>LAR_0029(dhaT) Score=5.2 Pos=-164 [Lactobacillus reuteri JCM 1112]
TTGTGAATATTATGACAA
# RNA - T-box(Ala)
>LAR_0519(alaS) Score=43.1 Pos=-233 [Lactobacillus reuteri JCM 1112]
AATATGACACGTCTGGGACATGCTATAGCTAACGGAAAATTCCAGAGACAGTTGGTGAGGTGTGACAACTGATTTCCTAGCTTTAGTGCTCCCCATTCGGATAATTTGATATTTAACCTTGGGTAACCAAGAAGTAAAGAGGTAAACGAATTCCATCGTTGCAAGCAGAGTGGTACCGCGTCAATCCGGCGTCTCTGATTC
# RNA - T-box(Asn)
>LAR_1767(asnA) Score=123 Pos=-308 [Lactobacillus reuteri JCM 1112]
GAAAAGCGATGAGAAAGAAGAGTAACTAGTTGTATTCGTTCAGTGAACTGGTGGTAGTGAGAAACCAGTCGACCCTACGCTAGTGAATAACACTTTCGCGAGTGCTGCCAACCCAAATAGGTTTACTTAAAGTAGGCTTGGCCGGATCCGGACCGTTACCTCACCGGCAGAGCATGATGTGCTCTTGAGGAGGCCTAGTTTTATACTAGACAATTTGGGTGGTACCGCGGAAAAAAGCCTTTCGTCCCTTGATT
# RNA - T-box(Asp)
>LAR_1731(hisS) Score=67.8 Pos=-281 [Lactobacillus reuteri JCM 1112]
TATAAAAGCATTGACGTAGAAACAAAGTGCCTGTGTAATTGACAGAGACCCAGTTGAGCTGAGAGCTGGGAGCAGACATGATCCACCTCTACTAGCTGAAAGGATGAATTTTAGTAGTCTGTTCCGGTGATTCCGTTATCATCAGGAGTTAACGCAACTCCATGAGGCAGTGACTGTGAGGTTACTGTAAAATAGAGGTGGAACAGTGATGAATATCGCCCTCTAA
>LAR_0695(aspS) Score=50.6 Pos=-233 [Lactobacillus reuteri JCM 1112]
AATAGCTGTTGATAAAGAATGCTCGGGTACTTGAAATTATCAGCGATTGGAGAAAGGTGAGAGCTCCAAATATTTCAGCCTCGATTGACCCTTTTGAAGCTGGGCAATATGCTCCGTCGTTTAGACGTTATTTTTGAGTGATACCAAGGTGGTACCGTGCATTTGCACCCTTGTAAT
# RNA - T-box(Arg)
>LAR_1204(argS) Score=63.1 Pos=-228 [Lactobacillus reuteri JCM 1112]
ATGAAAATAGGATTTGAGGAGTAGTAGCATTTTGAAATCTACAGCGACCCTTTGTTGATGAGAGTTAGGGGCTTTTCGATTTGTGAAGGCGTGCCTCAGATATTTCAATTAAATCAATGAATGAGTGGAATTCTAATTCAATTAGAGTGGTACCGCGGGTAAATCTCGTCTCTAGT
# TF - MntR: LAR_1415
>LAR_1743(mntH) Score=4.8 Pos=-89 [Lactobacillus reuteri JCM 1112]
TTTTTATGTTACCCTAACAA
# RNA - T-box(Gly)
>LAR_0711(glyQ) Score=50.1 Pos=-216 [Lactobacillus reuteri JCM 1112]
TATTGGCAATGACAGAGATTATGGATAAACCAAATCAGCGAGCAGGGGATAGTGCAAGCCTTGTAATTTATTTATCCTTGGCACTCTAACAGCCGCTTAAACTAAGCTGTTTTACAGAGATGTAAAAAAGTAGGGTGGAACCGCGATTAACTTCGTCCCTACAGT
# RNA - T-box(Ile)
>LAR_0578(ileS) Score=90.7 Pos=-276 [Lactobacillus reuteri JCM 1112]
TAAAATCGTTGAAGAGAATTGGAATAATTATCGTAACATTAAAGCGAGTCAACAATTGGTGAGAGGTTGATAATGTTTAACTATTCCTGATCATCTCGGAGTACCTCATTTGAGTTAGTTAGAATGAGGCGGTTCATTATCGTTATCTAATGACATGAGGAAACTTTAATCTTAAGGTTTTAAATCCGGGTGGTACCGCGAAGAAGCTTCGTCCCAGTAAT
>LAR_1696(brnQ) Score=109.6 Pos=-290 [Lactobacillus reuteri JCM 1112]
CGATCGCAATGAGAAAGAAGAGTATGTTAGACGATAGCTTCAGCGAGTCTCGTTTGGTGTGAGGAGACAGTTTTAACTCTAACTGAAAATCACTTTCGAGTCTACAGCTTAAATACCAGTAAGCTGTAGTGGTTACACCCATTATCGTGTCAGCGTATCGCCATTATGGCCGTACGTGTGAGGTATTGTTAGCAATAGCAGTACAATGATAGGGTGGTACCACGCTCAGCGTCCCTTAGCC
# RNA - T-box(Leu)
>LAR_1228(leuS) Score=104.2 Pos=-270 [Lactobacillus reuteri JCM 1112]
TAAATATTTGATCGTAATAGAAATAGTAGTATTTGACGAGGTCAGCAGAGATCCTGTGGTGGTGTGAACAGGAGACTGGTCATTTACGAACTCATCTAAATGTGATTATTACTGAATTTTAGTAGGTAATGACGTTTACCGCGTTAAGGTCTTAAGCGCCATGGATTCCATGGAAAACGGGTGGTACCGCGGAGTTATTTCGTCTCGTAG
# RNA - T-box(Met)
>LAR_1486(rhc) Score=82.2 Pos=-329 [Lactobacillus reuteri JCM 1112]
AGATATTGCTTAGAAAAGATGAGTAATTATTTAATGCCATTACAGAGAGCTAGGAAAGATGAGAACTAGTATGGTGACGAATAATGAAGATGGTCTTGGAGCAGACTGATGCTGTGAGCATACATGTTAGCAGCAAGCGATTAGCACCCGTTACCGTGCTGGAGTATTTTTATGTACTTTTTGCGGGTCTTATTGTGAGATAAGGCTAAATTAGGGTGGTATCACGTTAATGAATATTAGACGTCCCTAGG
>LAR_0184(metQ) Score=98 Pos=-335 [Lactobacillus reuteri JCM 1112]
TTAAAACATATCGAAAAGCAGAGTAAGTAGCGAGGCTTACAAGAGAGCTTCTGGGTGGTGTAAAGAAGCAAGCGTAACTACTGAAGATGGGCTTGGAATGGTATCGATGATTGTTAGTCGATAACGGGTTAGCACACGTTATTAGTGCTAGGTAATTCTAATTATTTTATTAGAGTAACCTACTGAGGCTGGGTCTGTGAAGATTCAGCAAATAAAGGTGGTAACGCGAGCACTCGTCCTTTGA
>LAR_1132(metQ2) Score=71.3 Pos=-304 [Lactobacillus reuteri JCM 1112]
TAAAATTACGTTAGAAAAGATGAGTAATTATTTTACGACCAATACAGAGAGCCATAGGAGCTGAGAAATGGCAGGAAACGAAATAATGAAGATGGTCTTTGGTTAATTGAGAGGGTGAACTTTGCTTAAAAGCAAATTTTCTACGGGGTAGCAACCGTTATCTATGCTTCTAATTTCAAGCTGGGATTAGAATGGAGGGTACTTTTGTACTGAAGACAGGGTGGTAACACGTTATTAACGTCCCTAAG
>LAR_0993(mmuM) Score=85.7 Pos=-296 [Lactobacillus reuteri JCM 1112]
AGAATTCGCTGAGATCGAATGAGTAACTAATGATAGATTTAACAGAGAGCTGTGACTGGTGCAATGCAGTATTTCTAGAGTTAGTGAAGATGGTTCGTGAGCGATTGATCGGTGAATAATTAGCAGATCACGGCGTTGCTACCGTTACCCAAGCTGCAAATTTATTACTTATGAATAAGTTTGTTTGAGTGCAGGATTTTAACTTTCCTGAATTTGGGTGGTACCGCGTATTGATCGTCCCTTGA
>LAR_1028(metE2) Score=78.7 Pos=-312 [Lactobacillus reuteri JCM 1112]
TAACCGCAATGAAAAGATGAGTAATTGATGGTCGCCTTCTCCAGAGAACTGCGGATGATGGGAAGCAGCGTTGGCTAAGTCAGTGAAGATGGTCTTGGAGCGATGAAAGTTGTGAGCTATTTGTAAGCAGCTTACGGGTTGGTGTACGTTATAACACTTGGGTATTCCCTTGGAGTACTTGTAGAGAGTTTGGCTGTGAGGTCAAGCTAAAATAGGGTGGTAACACGCTATCGATGTCTAATCATTACGCGTCCCTAGAAC
>LAR_1752(metE2) Score=87.1 Pos=-345 [Lactobacillus reuteri JCM 1112]
AAACAGCTTAGAAAAGATGAGTAATCTTAGAATCTTATTACAGAGAATCACGGTTGATGAGAGGTGACATAAGAGACTAAGATGAAGATGGTCTTGGAGCTTCACGAATTACGAGTATTTTATATAAGTAATTCACGATTGACGACCGATAAAACGTCTGGGTATAGCTTCCATTAGTGTACCTATTGAGGATAGTATTGTGAGATGCTATCAAATTAGGGTGGTAACACGTTAATTAACCATTGATTAATCAACGTCCCTAGGAA
# RNA - T-box(Phe)
>LAR_1151(pheS) Score=95.6 Pos=-246 [Lactobacillus reuteri JCM 1112]
ATTAAAAGCGATGATGAGAGCTAGTAGCTAAACGATCCTGTTAGAGAGTTGCAACCATGAGCTGAGAATTGCAATCAGTGATCTAAAGCGAATTTCACTTTCGGAGCTGATACGTAATGGTATTCCGGCCAATCACCGTTATTGATTACTAGAGTGTGTAGGATTTTCCCCTACAAACTAGGGTGGTACCGCGAAGCCTCGTCCCTATA
# RNA - T-box(Pro)
>LAR_0335(proB) Score=18.4 Pos=-207 [Lactobacillus reuteri JCM 1112]
ATTTTAATTGTAGATAAAAGTAGGTCAGTCCAGGAACGATAGTCATCGACTGCAAGCTATCGCCAGTACCGAAGCCCTGCTACAACTTTAATATATTCTAATAATAAAATAATTTAAAAGTGTAAAGCGCGTCTTTAAACGAGAATGGTACCGCCATAATTGGTGTCTCGG
# RNA - T-box(Ser)
>LAR_0091(serS) Score=63.5 Pos=-241 [Lactobacillus reuteri JCM 1112]
AGAAAACACGAATGCATTTCAAGTAGGTTGTTCAGAGAAGCAGCGGGTGGTGGGAGCTGTCGACCGAAACTCCGGTGCAAAAATATGTGGGCAGGTAATTCTGCACGGATAGTAGCCGTTATCTACTTCGAAGGGTGACTAAAGATAGTCAAACTTGGGTGGTACCGCGGAACTAGAGCCATTTCGTCCCAAAATA
# RNA - T-box(Thr)
>LAR_1745(thrS) Score=62.3 Pos=-199 [Lactobacillus reuteri JCM 1112]
TCGATTGAAGGATATGCACCTTCAAAGTCCTCTACAGAGAGTAAGTGCCTTGAGTGGAAGTACTTATGAGTGACAATGATGGTTGTACCACCTTCCCTTATTATTAGCCGAGATAAGGCTAGTCGGATCGTGTCCGTTACCGCACCTTAGAGAGGACATTACTAGTGTGTCCTAAAGATGGGTGGAACCACGCTAATTTTTGTTAATTGACGTCCCTGATAC
# RNA - T-box(Trp)
>LAR_0194(trpS) Score=37.2 Pos=-196 [Lactobacillus reuteri JCM 1112]
TAAAATTAACTATATTAAGTAGCGCGAGTCTTAGCGAGGGACAGTTGGTGAAAAGGTCCCCAAAGTGCGAAATGGTCACAACAAAATACATAATGAGCGGCAATGATGATTGCAATTTAGGTGGCACCGCGCGAAAAGCGTCCTATTTAG
# RNA - T-box(Tyr)
>LAR_0142(tyrS) Score=69.3 Pos=-238 [Lactobacillus reuteri JCM 1112]
CAAAGATGAAGAAGTAATCTTAGTAGTAAGCGGTTGGACATTTAGGAAGCAAGTGGTAACTGTAAACTTTGCCAATGCCGTTATACGAATTACACTTACGGAGTCTTTCAGTATTTGAACGGATCGTCTCGTTATCGACTAGAGTGGTAGCTAGCTAGCTGCAATCAAGGTGGTAACGCGGTAAATCGTCCCTGACTT
>LAR_1714(tyrT) Score=61.1 Pos=-250 [Lactobacillus reuteri JCM 1112]
ACAATTATCGTTTCAGTAGAACCTTCGTTGGGCGTAAGAGAGCCGGTGGTTAGGTGCGAACCGGTCAGGCGGAGTGTTTCGAATTATCACGTGATCTGAATTGTCCGGCCATATTCAGTGCCGTTACCACCTGATATGAGTGCGCATAAAATCAAGATGCGTAGGTGGGTGGTACCGCGATTAAAATAATCGTCCCGTTGAT
# RNA - T-box(Val)
>LAR_0490(valS) Score=118.3 Pos=-283 [Lactobacillus reuteri JCM 1112]
AATAAGCATTGACCGAAAGAGTAGTAAAGCGGCACCTAAAAAGCGAGATCCTGATAGTGAGAGAGGATTAGTTAAACTTTATGAAGGTAGTTCGGGAGCTGATATACTGAAATTAATAGTAGGTATGTCCGGTTCATTTACCGTTATGAAATGATAAAGTGGAGTATTTTATACTCAAATTAGGTGGTACCGCGATGATTCGTCCTATCGAT
# TF - SdaR: LAR_0599
>LAR_0599(sdaR) Score=5 Pos=-338 [Lactobacillus reuteri JCM 1112]
CATAGTTCCTATTATCAAAA
>LAR_0600(grtP) Score=5 Pos=-172 [Lactobacillus reuteri JCM 1112]
TTTTGATAATAGGAACTATG
# TF - CopR: LAR_0894
>LAR_0894(copR) Score=5.1 Pos=-32 [Lactobacillus reuteri JCM 1112]
GAATTTACATGTGTAAACGC
>LAR_0423(copA2) Score=4.6 Pos=-70 [Lactobacillus reuteri JCM 1112]
TTGTTGACAACTGTAAACTT
>LAR_0423(copA2) Score=6.4 Pos=-27 [Lactobacillus reuteri JCM 1112]
ATGATTACAATTGTAAACTA
# TF - FabT: LAR_0928
>LAR_0928(fabT) Score=6.3 Pos=-58 [Lactobacillus reuteri JCM 1112]
ATTTTGATAATCAAATT
>LAR_0929(fabA) Score=5.6 Pos=-59 [Lactobacillus reuteri JCM 1112]
AATTTGATCATCGAATA
# TF - MalR: LAR_0049
>LAR_0051(malT) Score=6 Pos=-124 [Lactobacillus reuteri JCM 1112]
TTGCGCAAGCGGTTGCGCAA
# TF - DeoR: LAR_0109
>LAR_0095(nupC) Score=5.2 Pos=-251 [Lactobacillus reuteri JCM 1112]
ATGACAGCGTTTTCAT
>LAR_0105(deoC) Score=5.6 Pos=-39 [Lactobacillus reuteri JCM 1112]
ATGAAAACGCATTCAA
# TF - NrtR: LAR_0147
>LAR_0148(pncB) Score=6.1 Pos=-75 [Lactobacillus reuteri JCM 1112]
TAAAAGTTAATCATACTTTTA
# TF - PerR: LAR_1232
>LAR_1232(perR) Score=5.3 Pos=-107 [Lactobacillus reuteri JCM 1112]
TTAGAATAATTATTA
>LAR_1232(perR) Score=5.5 Pos=-31 [Lactobacillus reuteri JCM 1112]
TTATAATTATTTTAA
>LAR_1019(ahpC) Score=5.6 Pos=-94 [Lactobacillus reuteri JCM 1112]
TTAGAATTGTTCTAA
>LAR_1019(ahpC) Score=5.7 Pos=-33 [Lactobacillus reuteri JCM 1112]
TAAGAATGATTCTAA
>LAR_1418(pcl2) Score=5.4 Pos=-102 [Lactobacillus reuteri JCM 1112]
TTTTAATGATTCTAA
>LAR_1418(pcl2) Score=6 Pos=-38 [Lactobacillus reuteri JCM 1112]
TTATAATGATTCTAA
>LAR_1231(ycnB) Score=5.4 Pos=-107 [Lactobacillus reuteri JCM 1112]
TTAAAATAATTATAA
>LAR_1231(ycnB) Score=5.6 Pos=-31 [Lactobacillus reuteri JCM 1112]
TAATAATTATTCTAA
# TF - RbsR: LAR_1219
>LAR_1219(rbsR) Score=4.7 Pos=-35 [Lactobacillus reuteri JCM 1112]
TAGATAAAACTGTTTACTAA
# TF - ArgR: LAR_0436, LAR_1111
>LAR_0081(carA) Score=3.6 Pos=-136 [Lactobacillus reuteri JCM 1112]
CATACATATATATTCAAT
>LAR_0702(argG) Score=4.7 Pos=-164 [Lactobacillus reuteri JCM 1112]
ATTAAATAATTATTCTAT
>LAR_0698(artPQ) Score=4.7 Pos=-253 [Lactobacillus reuteri JCM 1112]
ATTGCATAAATAAACATT
>LAR_0081(carA) Score=4.7 Pos=-261 [Lactobacillus reuteri JCM 1112]
TTTGCATAAAAATTCATT
# TF - GalR: LAR_0856, LAR_1660
>LAR_0856(galR) Score=5.5 Pos=-54 [Lactobacillus reuteri JCM 1112]
AAACGTTTACTAAAAATAT
>LAR_0857(melA) Score=5.4 Pos=-128 [Lactobacillus reuteri JCM 1112]
ATATTTTTAGTAAACGTTT
>LAR_0276(lacL) Score=4.9 Pos=-95 [Lactobacillus reuteri JCM 1112]
AAAATTTACGTAAATTTTA
>LAR_1662(galK) Score=4.9 Pos=-53 [Lactobacillus reuteri JCM 1112]
TTGTATTTAGTAAAAGTTT
# TF - HrcA: LAR_0677
>LAR_0342(groS) Score=6.5 Pos=-61 [Lactobacillus reuteri JCM 1112]
TTAGCACTTGAAGAGTTTGAGTGCTAA
>LAR_1257(clpL) Score=6.9 Pos=-211 [Lactobacillus reuteri JCM 1112]
TTAGCATTCATGGCTAAAGAGTGCTAA
>LAR_0379(clpP) Score=5.8 Pos=-47 [Lactobacillus reuteri JCM 1112]
TTAGCATATAAGACTAACGAGTGCTAA
>LAR_0677(hrcA) Score=6.5 Pos=-45 [Lactobacillus reuteri JCM 1112]
TTAGCACTTGACCCTAATGAGTGCTAA
# TF - Zur: LAR_1528
>LAR_0207(znuA) Score=6.8 Pos=-36 [Lactobacillus reuteri JCM 1112]
TAAATAGTAACGATTACGATTAA
>LAR_0209(znuB) Score=5.3 Pos=-9 [Lactobacillus reuteri JCM 1112]
TAAAAAGTAATGTTAACTTTAAG
# TF - NrdR: LAR_1178
>LAR_1249(nrdD) Score=5.3 Pos=-92 [Lactobacillus reuteri JCM 1112]
CCACAACATATAGTGT
>LAR_0313(nrdH) Score=5.6 Pos=-115 [Lactobacillus reuteri JCM 1112]
GTACTATATATTGTGT
>LAR_1221(dgk2) Score=4.4 Pos=-88 [Lactobacillus reuteri JCM 1112]
CCACCAAATATTGTAA
>LAR_1221(dgk2) Score=5 Pos=-56 [Lactobacillus reuteri JCM 1112]
CCACAATATTTTGTAG
>LAR_1670(pnuN) Score=5.6 Pos=-72 [Lactobacillus reuteri JCM 1112]
CCACAATATCTTGTGT
>LAR_1670(pnuN) Score=4.9 Pos=-30 [Lactobacillus reuteri JCM 1112]
GCACAACATATAGTAG
# TF - LacR: LAR_1034
>LAR_1033(lacS) Score=5.2 Pos=-79 [Lactobacillus reuteri JCM 1112]
AATATTTACTAAAATTA
# TF - MalR3: LAR_0083
>LAR_0078(nplT) Score=6.1 Pos=-69 [Lactobacillus reuteri JCM 1112]
TTAAGTAAACGTTTACATTA
>LAR_1508(malT2) Score=5 Pos=-115 [Lactobacillus reuteri JCM 1112]
AAAAGTAAACGGTTGCTAAT
# TF - GntR2: LAR_0764
>LAR_0810(gntK) Score=6 Pos=-54 [Lactobacillus reuteri JCM 1112]
AGGTGTAACGATAAACTA
# RNA - THF
>LAR_1766(folT) Score=36.6 Pos=-95 [Lactobacillus reuteri JCM 1112]
TTGGGGTAGGAATCTCAGAGTTATTGTCTAACGGAACGGAATGTGAACGTTAGGAGGAGGCTTATAACTAGCTGCTTTGTTATTCCGCATTCACCATGAA
# TF - CtsR: LAR_1405
>LAR_0379(clpP) Score=6.7 Pos=-93 [Lactobacillus reuteri JCM 1112]
AAACATTTGACCTTTTTTGACCAA
>LAR_0677(hrcA) Score=6.5 Pos=-101 [Lactobacillus reuteri JCM 1112]
AATTGTTTGACGTTTCTTGACTTT
>LAR_1257(clpE) Score=0.2 Pos=-59 [Lactobacillus reuteri JCM 1112]
ATGGTCAAGAAAGGTCAAAACATT
>LAR_0342(groS) Score=-1.1 Pos=-128 [Lactobacillus reuteri JCM 1112]
ATGGTCAAAAAAAGTCAAAGTGTT
# TF - LexA: LAR_0650
>LAR_0650(lexA) Score=5.2 Pos=-71 [Lactobacillus reuteri JCM 1112]
GCGAACGTACGTTTGA
>LAR_0752(parE) Score=4.6 Pos=-45 [Lactobacillus reuteri JCM 1112]
TCGAACATACGTTTAG
>LAR_0509(recA) Score=4.3 Pos=-89 [Lactobacillus reuteri JCM 1112]
ACGAACTTTTGTTCAC
>LAR_1238(umuC) Score=4.8 Pos=-59 [Lactobacillus reuteri JCM 1112]
TTGAACATATGTTTGA
>LAR_0047(addB) Score=4.8 Pos=-67 [Lactobacillus reuteri JCM 1112]
AAGAATATATGTTCGT
>LAR_0372(uvrB) Score=4.4 Pos=-132 [Lactobacillus reuteri JCM 1112]
ACGAATACATGTTTGG
# TF - BirA: LAR_0705
>LAR_0704(bioY) Score=8.7 Pos=-71 [Lactobacillus reuteri JCM 1112]
ATAGTAACC----------------GGTTACAAT
# TF - Lp_2742: LAR_1262
>LAR_1262(lp_2742) Score=6.5 Pos=-48 [Lactobacillus reuteri JCM 1112]
TTAGTTACATAAGTGATTAA
# TF - YwzG: LAR_0307
>LAR_0307(ywzG) Score=7.2 Pos=-44 [Lactobacillus reuteri JCM 1112]
ATATTATATGACATATAATAT
# TF - MleR: LAR_1442, LAR_1437
>LAR_1441(mleS) Score=5.7 Pos=-100 [Lactobacillus reuteri JCM 1112]
TATCAATTTTATTTATA
>LAR_1442(mleR) Score=5.7 Pos=-53 [Lactobacillus reuteri JCM 1112]
TATAAATAAAATTGATA
# TF - CzcR1: LAR_1706
>LAR_1705(cadD1) Score=6.5 Pos=-60 [Lactobacillus reuteri JCM 1112]
ATATATCAAATTCGATATAT
>LAR_1705(cadD1) Score=6.3 Pos=-33 [Lactobacillus reuteri JCM 1112]
GTATATCGAATTTGATATAT
# TF - FlpA: LAR_1338
>LAR_1340(copZ) Score=5.7 Pos=-69 [Lactobacillus reuteri JCM 1112]
AAATTGATGATAATCAATTT
>LAR_1339(dps) Score=5.7 Pos=-298 [Lactobacillus reuteri JCM 1112]
AAATTGATGATAATCAATTT
# TF - YxeR: LAR_1741
>LAR_1741(yxeR) Score=3.4 Pos=-38 [Lactobacillus reuteri JCM 1112]
ACGGTGACACGGTGTCACGAT
>LAR_1741(yxeR) Score=4.5 Pos=-83 [Lactobacillus reuteri JCM 1112]
TGATTGACATGGTGTCACTTT
# RNA - SMK_box_riboswitch
>LAR_1229(metK) Score=60.1 Pos=-111 [Lactobacillus reuteri JCM 1112]
TTCTCGTTATAAAGCAATTCCCGATAGGATTCACGTCTGAACGTGAAGATGCCTTGTAACCGCAACTACAAACTATTTGAAAGTTTCAATAGAATATGGGGGAATTAGAAAATG
# TF - LAR_1807: LAR_1807
>LAR_1806(azlC) Score=8.2 Pos=-91 [Lactobacillus reuteri JCM 1112]
ATATTGTAA---ATACAATTA
>LAR_1807(LAR_1807) Score=8.2 Pos=-35 [Lactobacillus reuteri JCM 1112]
TAATTGTAT---TTACAATAT