# TF - SphR: PCC8801_3460
>PCC8801_1024(pstS) Score=9.8 Pos=-108 [Cyanothece sp. PCC 8801]
TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
>PCC8801_4067(sphX) Score=8.1 Pos=-157 [Cyanothece sp. PCC 8801]
CTTAGCAT-(3)-CTTTTTCT-(3)-GCTAAACT
>PCC8801_1433(spoT) Score=8.5 Pos=-224 [Cyanothece sp. PCC 8801]
TTTAACAG-(3)-CTAAACCT-(3)-TTTAAACT
>PCC8801_1847(SYNPCC7002_A1357) Score=7.5 Pos=-43 [Cyanothece sp. PCC 8801]
AATAAATT-(3)-TCTTATTT-(3)-ATTATCTT
>PCC8801_4178(purF) Score=7.5 Pos=-104 [Cyanothece sp. PCC 8801]
GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
>PCC8801_1683(nucH) Score=9.8 Pos=-246 [Cyanothece sp. PCC 8801]
ATTAAACT-(3)-CTTAAATT-(3)-GTTAAATA
>PCC8801_0430(fbp) Score=7.9 Pos=-278 [Cyanothece sp. PCC 8801]
TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
>PCC8801_0346(cysR) Score=9.7 Pos=-91 [Cyanothece sp. PCC 8801]
TTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
>PCC8801_3887(ackA) Score=9.1 Pos=-183 [Cyanothece sp. PCC 8801]
CTTTGACC-(3)-GTTTACCA-(3)-CTTAACCT
>PCC8801_1625(ppk) Score=7.2 Pos=-95 [Cyanothece sp. PCC 8801]
TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
>PCC8801_3662(rsbU) Score=7.4 Pos=-162 [Cyanothece sp. PCC 8801]
ATTAACGC-(3)-GATTAACC-(3)-CCTAATTA
>PCC8801_2302(SYNPCC7002_A0979) Score=7.1 Pos=-232 [Cyanothece sp. PCC 8801]
CATAATGA-(3)-TTTTAAGA-(3)-GTTAAAAA
# TF - Fur: PCC8801_0870
>PCC8801_0791(chlL) Score=2.7 Pos=-242 [Cyanothece sp. PCC 8801]
ATTTAGTAAATTTTAAAGT
>PCC8801_2575(SYNPCC7002_A2351) Score=3.1 Pos=-247 [Cyanothece sp. PCC 8801]
ATTTCTCCTTATTTTTAAT
>PCC8801_0349(sll1407) Score=3.3 Pos=-107 [Cyanothece sp. PCC 8801]
AATAATTAATTTTTTTTAT
>PCC8801_0256(ctaA) Score=2.2 Pos=-185 [Cyanothece sp. PCC 8801]
TTTTATTAACTTATGTAAA
>PCC8801_2812(SYNPCC7002_A0913) Score=4.4 Pos=-67 [Cyanothece sp. PCC 8801]
TATGATAAAATTTATTAAA
>PCC8801_4320(chlH) Score=2.3 Pos=-186 [Cyanothece sp. PCC 8801]
ATTTGTCAATATTTGTAAC
>PCC8801_0567(coxB) Score=2.7 Pos=-152 [Cyanothece sp. PCC 8801]
TTTGTTTATTATTTGTTAC
>PCC8801_3918(nifJ) Score=3.4 Pos=-67 [Cyanothece sp. PCC 8801]
TTTGTCAATAATTTGTAAC
>PCC8801_1443(sufA) Score=4 Pos=-90 [Cyanothece sp. PCC 8801]
ATTAGGAATAATTAGCAAC
>PCC8801_1928(SYNPCC7002_G0061) Score=2 Pos=-184 [Cyanothece sp. PCC 8801]
AATATTTTATATTTATAGT
>PCC8801_2860(fdx) Score=3.8 Pos=-49 [Cyanothece sp. PCC 8801]
ATTGTAAAAAAATATTAAC
>PCC8801_0870(fur) Score=4.6 Pos=-97 [Cyanothece sp. PCC 8801]
GTTGCAAATTATTTGCAAT
>PCC8801_3039(SYNPCC7002_G0098) Score=5.5 Pos=-89 [Cyanothece sp. PCC 8801]
GTTGACAAAAATTCTCATT
>PCC8801_3017(exbB) Score=5.7 Pos=-38 [Cyanothece sp. PCC 8801]
ATTGATAACTTTTCTCAAT
# TF - LexA: PCC8801_2186
>PCC8801_1259(SYNPCC7002_A0856) Score=4.4 Pos=-47 [Cyanothece sp. PCC 8801]
ACTACACTTGTATT
>PCC8801_2186(lexA) Score=4.3 Pos=-75 [Cyanothece sp. PCC 8801]
AGTACTTATGTTCG
# TF - NrtR: PCC8801_0269
>PCC8801_0271(pncB) Score=6 Pos=-74 [Cyanothece sp. PCC 8801]
TTTTGGTAAAAACTACTATAA
>PCC8801_0787(nadA) Score=6.1 Pos=-44 [Cyanothece sp. PCC 8801]
TTATGGTAAAAACAACTATAA
# TF - NtcA: PCC8801_2058
>PCC8801_1229(amt1) Score=5 Pos=-264 [Cyanothece sp. PCC 8801]
TGTATTTTTTGATACA
>PCC8801_1229(amt1) Score=4.1 Pos=-229 [Cyanothece sp. PCC 8801]
AGTAATAAAAAAAACA
>PCC8801_3101(SYNPCC7002_A0076) Score=4.6 Pos=-95 [Cyanothece sp. PCC 8801]
TGTATTGGTTGTTACA
>PCC8801_2066(SYNPCC7002_A2395) Score=4.8 Pos=-53 [Cyanothece sp. PCC 8801]
TGTAATATTAATTACA
>PCC8801_3053(SYNPCC7002_A1954) Score=4.8 Pos=-198 [Cyanothece sp. PCC 8801]
TGTAATCATAGTTACA
>PCC8801_3848(cce_3797) Score=5.1 Pos=-165 [Cyanothece sp. PCC 8801]
TGTAACTTTAGATACA
>PCC8801_2371(gifA) Score=4.9 Pos=-94 [Cyanothece sp. PCC 8801]
TGTATAAATTGCTACA
>PCC8801_0808(glnA) Score=4 Pos=-92 [Cyanothece sp. PCC 8801]
CGTATCATGGTATACA
>PCC8801_3212(hupS) Score=4.3 Pos=-127 [Cyanothece sp. PCC 8801]
TGTAACAACAATAACA
>PCC8801_3485(ndh) Score=4.6 Pos=-117 [Cyanothece sp. PCC 8801]
TGTAACCATAGCTACT
>PCC8801_3485(ndh) Score=3.8 Pos=-92 [Cyanothece sp. PCC 8801]
CGTAATTGGTTTTACA
>PCC8801_4396(nrtA) Score=4.6 Pos=-184 [Cyanothece sp. PCC 8801]
TGTAGCAAATAATACG
>PCC8801_4396(nrtA) Score=3.9 Pos=-106 [Cyanothece sp. PCC 8801]
AGTATTTATAGACACA
>PCC8801_2468(nirA) Score=4.6 Pos=-75 [Cyanothece sp. PCC 8801]
TGTTACAATTAATACA
>PCC8801_2463(narB) Score=4.4 Pos=-165 [Cyanothece sp. PCC 8801]
TGTATtAccaaATACA
>PCC8801_3375(nrrA) Score=4.5 Pos=-76 [Cyanothece sp. PCC 8801]
CGTAGCAGATGTTACA
>PCC8801_2329(ntcB) Score=4.7 Pos=-80 [Cyanothece sp. PCC 8801]
TGTATCAAATTCTACT
>PCC8801_3848(SYNPCC7002_A2101) Score=5.1 Pos=-165 [Cyanothece sp. PCC 8801]
TGTAACTTTAGATACA
>PCC8801_3216(psbA3) Score=4.4 Pos=-59 [Cyanothece sp. PCC 8801]
AGTAGTTATTGCTACT
>PCC8801_0154(rpoD) Score=4.4 Pos=-257 [Cyanothece sp. PCC 8801]
TGTAATCGAGGCTACA
>PCC8801_0807(apcF) Score=4 Pos=-251 [Cyanothece sp. PCC 8801]
TGTATACCATGATACG
>PCC8801_0870(fur) Score=3.4 Pos=-380 [Cyanothece sp. PCC 8801]
TGTTTATGCTAAAACA
>PCC8801_0567(coxB) Score=3.8 Pos=-148 [Cyanothece sp. PCC 8801]
TTTATTATTTGTTACC
>PCC8801_3918(nifJ) Score=3.5 Pos=-265 [Cyanothece sp. PCC 8801]
AGTAACCATAATTATT
>PCC8801_4247(ndhF) Score=3.6 Pos=-238 [Cyanothece sp. PCC 8801]
CGTATTATGAGTTAGA
# TF - NtcB: PCC8801_2329
>PCC8801_4396(nrtA) Score=4.5 Pos=-235 [Cyanothece sp. PCC 8801]
ATGCAAAAACCACAT
>PCC8801_4396(nrtA) Score=4 Pos=-213 [Cyanothece sp. PCC 8801]
ATGCTTTTATTGCAA
>PCC8801_2468(nirA) Score=3.9 Pos=-126 [Cyanothece sp. PCC 8801]
ATGCAAAATAATCAT
>PCC8801_4145(psbL) Score=4.3 Pos=-30 [Cyanothece sp. PCC 8801]
ATGCAATTTATTCAA
>PCC8801_2861(psbM) Score=4.2 Pos=-249 [Cyanothece sp. PCC 8801]
ATGCGGAACCTGTAT
# TF - Zur: PCC8801_4134
>PCC8801_0774(cce_1485) Score=7 Pos=-32 [Cyanothece sp. PCC 8801]
ATGATAATGATAATCATTCTAAT
>PCC8801_2484(cce_1485) Score=4.9 Pos=-84 [Cyanothece sp. PCC 8801]
CTCATAATGATTTTCATAATTGT
>PCC8801_2483(cce_1484) Score=4.9 Pos=-53 [Cyanothece sp. PCC 8801]
ACAATTATGAAAATCATTATGAG
>PCC8801_0773(cce_1484) Score=7 Pos=-40 [Cyanothece sp. PCC 8801]
ATTAGAATGATTATCATTATCAT
>PCC8801_0861(smtA) Score=5.7 Pos=-152 [Cyanothece sp. PCC 8801]
TCTAGAATGATAATCACTCTCAT
>PCC8801_0864(folE2) Score=5.9 Pos=-50 [Cyanothece sp. PCC 8801]
TTGAGAACGATTATCATTTTAAA
>PCC8801_0777(hemB2) Score=5.5 Pos=-72 [Cyanothece sp. PCC 8801]
TTGATAATGATTATCATTCCGTG
>PCC8801_0777(hemB2) Score=6.7 Pos=-32 [Cyanothece sp. PCC 8801]
ATAATAATGATTATCATTTTTAA
>PCC8801_0862(yciC2) Score=5.4 Pos=-76 [Cyanothece sp. PCC 8801]
TTGAGAATGATTCTTATTCTTGA
>PCC8801_0862(yciC2) Score=5.7 Pos=-38 [Cyanothece sp. PCC 8801]
ATGAGAGTGATTATCATTCTAGA
>PCC8801_3888(znuA) Score=5.3 Pos=-52 [Cyanothece sp. PCC 8801]
GATACAATGATAATCGTTATCAG
# TF - SufR: PCC8801_0414
>PCC8801_0414(sufR) Score=5.6 Pos=-160 [Cyanothece sp. PCC 8801]
AATAACAACCCCATTGTTGTCAAA
>PCC8801_0414(sufR) Score=5.7 Pos=-200 [Cyanothece sp. PCC 8801]
TTAAACAACATTTTTGTTGCTCAA
>PCC8801_3918(nifJ) Score=5.5 Pos=-134 [Cyanothece sp. PCC 8801]
AAAAACAACCATGAAGTTGTCTTA
>PCC8801_0415(sufB) Score=4.8 Pos=-188 [Cyanothece sp. PCC 8801]
TTTGACAACAATGGGGTTGTTATT
>PCC8801_0415(sufB) Score=5.9 Pos=-148 [Cyanothece sp. PCC 8801]
TTGAGCAACAAAAATGTTGTTTAA
# TF - Crp: PCC8801_0890
>PCC8801_3887(ackA) Score=4.3 Pos=-203 [Cyanothece sp. PCC 8801]
GGTGACAGAAATCAAA
>PCC8801_2372(murF) Score=4.8 Pos=-74 [Cyanothece sp. PCC 8801]
AGTGATCTGGGTCACA
>PCC8801_3186(serS) Score=3.7 Pos=-155 [Cyanothece sp. PCC 8801]
TTTGATCAATTTGACA
>PCC8801_0414(sufR) Score=3.8 Pos=-41 [Cyanothece sp. PCC 8801]
GTTGATTTAAGTCCTA
>PCC8801_0091(SYNPCC7002_A0687) Score=3.8 Pos=-153 [Cyanothece sp. PCC 8801]
TTTGATCTCGATCATT
>PCC8801_1783(nifS) Score=3.9 Pos=-80 [Cyanothece sp. PCC 8801]
TTTGAAAATTATCACC
>PCC8801_3705(chlA-II) Score=4.3 Pos=-250 [Cyanothece sp. PCC 8801]
TTTGATTTAATTCAAC
>PCC8801_1790(nifX) Score=4.3 Pos=21 [Cyanothece sp. PCC 8801]
AGTGACAATGTTCATA
>PCC8801_2557(gap2) Score=4 Pos=-31 [Cyanothece sp. PCC 8801]
ATTGAGCTAAAGCATA
>PCC8801_1006(cupS) Score=4.2 Pos=-199 [Cyanothece sp. PCC 8801]
ACTGATTTAATTCACT
>PCC8801_0019(slr1503) Score=4.6 Pos=-35 [Cyanothece sp. PCC 8801]
TGTGAGCTAAATCACT
>PCC8801_3693(SYNPCC7002_A2113) Score=4.2 Pos=-115 [Cyanothece sp. PCC 8801]
ATTGATATTAATCAAT
>PCC8801_2042(ppa) Score=4 Pos=-177 [Cyanothece sp. PCC 8801]
TGTGATACTCATCATA
>PCC8801_1079(rlpA) Score=3.8 Pos=-239 [Cyanothece sp. PCC 8801]
GGTGAAATTAGGCAAA
>PCC8801_2788(apcC) Score=3.9 Pos=5 [Cyanothece sp. PCC 8801]
GATGTTTAAAGTCACC
>PCC8801_4329(sigF) Score=3.7 Pos=-271 [Cyanothece sp. PCC 8801]
AGTGACCTAAATTCCG
# TF - CcmR: PCC8801_3406
>PCC8801_2762(mnhC) Score=4.7 Pos=-24 [Cyanothece sp. PCC 8801]
ATAGTTTTTTGTATAT
>PCC8801_3521(cmpA) Score=4.5 Pos=-268 [Cyanothece sp. PCC 8801]
ATACATATTAAGCTAT
>PCC8801_3646(glpX) Score=5 Pos=-74 [Cyanothece sp. PCC 8801]
ATAGACTTTTGACTAA
>PCC8801_2762(mnhC) Score=4.8 Pos=-56 [Cyanothece sp. PCC 8801]
ATAGGCTTTAAGCTAT
>PCC8801_1249(sbtA) Score=5.4 Pos=-174 [Cyanothece sp. PCC 8801]
ATAGATAAATGTCTAT
>PCC8801_4247(ndhF3) Score=5.6 Pos=-71 [Cyanothece sp. PCC 8801]
ATAGACTAAAGTCTAT
>PCC8801_4247(ndhF3) Score=5 Pos=-8 [Cyanothece sp. PCC 8801]
ATTGTTATATGTCTAT
>PCC8801_3406(ccmR) Score=4.4 Pos=-144 [Cyanothece sp. PCC 8801]
ATAGAATTTAATCAAA
>PCC8801_3406(ccmR) Score=4.8 Pos=-112 [Cyanothece sp. PCC 8801]
ATTGTATTTAATCTAT
>PCC8801_1398(cce_1687) Score=5.2 Pos=-46 [Cyanothece sp. PCC 8801]
ATAGCTTTTAATCTAT
>PCC8801_1398(cce_1687) Score=4.2 Pos=-14 [Cyanothece sp. PCC 8801]
ATAGAATAAATACAAT
# TF - HrcA: PCC8801_0875
>PCC8801_1190(groEL2) Score=10.2 Pos=-199 [Cyanothece sp. PCC 8801]
TTAGCACTC---------GAGTGCTAA
>PCC8801_2855(groES) Score=10.2 Pos=-82 [Cyanothece sp. PCC 8801]
TTAGCACTC---------GAGTGCTAA
# TF - PedR: PCC8801_4139
>PCC8801_3714(slr1957) Score=4.5 Pos=-148 [Cyanothece sp. PCC 8801]
AAGCAAGATTACCT
>PCC8801_4139(pedR) Score=4.7 Pos=-28 [Cyanothece sp. PCC 8801]
AAGTAAATGTACTA
>PCC8801_1619(rpe) Score=3.6 Pos=-275 [Cyanothece sp. PCC 8801]
AAGCAGCTATTCTG
>PCC8801_0791(chlL) Score=4.2 Pos=-42 [Cyanothece sp. PCC 8801]
AGGCAAATACACTT
>PCC8801_0789(chlN) Score=4.7 Pos=-357 [Cyanothece sp. PCC 8801]
AAGCAACTTTACCT
# TF - SmtB: PCC8801_0860
>PCC8801_0861(smtA) Score=6.9 Pos=-71 [Cyanothece sp. PCC 8801]
AATATCTGAATACCTGTTCAGATGTT
# RNA - TPP
>PCC8801_2662(thiC) Score=68.8 Pos=-106 [Cyanothece sp. PCC 8801]
CTTATAGCTAGGGGTGTCTGAATTAAACCAGGCTGAGAAAGACCCTTAGAACCTGAGACTGGGTAATACCAGCGTAGGGAAGCTGTTTCTTGAGGTATA
# RNA - Cobalamin
>PCC8801_2095(hupE) Score=60 Pos=-189 [Cyanothece sp. PCC 8801]
ATTATACCGAGGCTATTGGTTCTAGTGGGGAACAGCCACTAGAGGTAAGGGGGAAAGTTTGGTGTCAGTCCAACGCTGTCCCGCAACTGTGATGAAATTTTGAGCAAAAATCGAATATTTCTTAGTCAGAATACCCGCCAATTATTTAGCCAAATTAGT
# TF - ArsR: PCC8801_2322
>PCC8801_2322(arsR) Score=4.2 Pos=-231 [Cyanothece sp. PCC 8801]
ATGAAATTACGGTGAT
>PCC8801_2321(arsB) Score=5.9 Pos=-129 [Cyanothece sp. PCC 8801]
ATCAATTTTTTTTGAT
# RNA - ydaO-yuaA
>PCC8801_3675(tauC) Score=70.4 Pos=-268 [Cyanothece sp. PCC 8801]
GAGTAAGTCAGCTTAATCCAAGCCTCCATTCTGCAAAACTTCACTTTGTAAGAATTAAGACTGGAGCGGGGGACCCAACTAAGGGGCGCATTTCTAGGGAATCTTATCTAGAAAAGGACATCTCTCAGTCCTAGCCCGTCAGCTAACCTCGTCAGCTATTGAGAGGAGACTGAA
# RNA - L10_leader
>PCC8801_1738(rplJ) Score=49.1 Pos=-216 [Cyanothece sp. PCC 8801]
AATGCTTGTTTGGCTTACGCCGTAGACAGCAGGGGCAATTTGCTTAATGTCCTGCCGAGGTTGAGGCCTGATGAAAGGTAAACAATAGGGAGAAAAAGGGACTTTAGTCTGCTTTTTTGTCCTGTGT
# RNA - glnA
>PCC8801_4348(cce_1045) Score=47.2 Pos=-103 [Cyanothece sp. PCC 8801]
AATCGTTCATCCGCCTATCGGTCGGACGGAAGTAGGAAGTCATTGAGAGCTTCTGAAGGAACGCGCC