# TF - ChiR: TM0808
>TM0808(chiR) Score=6.9 Pos=-27 [Thermotoga maritima MSB8]
AAGTTGTTTGCGGCATGCAACTA
# TF - GloR: TM0299
>TM0299(gloR) Score=6.4 Pos=-82 [Thermotoga maritima MSB8]
TACGCAAACGTTTGCTTA
>TM0300(gloE) Score=6.4 Pos=-173 [Thermotoga maritima MSB8]
TAAGCAAACGTTTGCGTA
# TF - HcpR: TM1171
>TM1171(hcpR) Score=6.5 Pos=-28 [Thermotoga maritima MSB8]
TCTGTAACAATTGTTACGGG
>TM1172(hcp) Score=6.5 Pos=-87 [Thermotoga maritima MSB8]
CCCGTAACAATTGTTACAGA
# TF - BglR: TM0032
>TM0032(bglR) Score=6.8 Pos=-45 [Thermotoga maritima MSB8]
AATTTCTTTCTGAGGAAGATAGA
# TF - UxaR: TM0439
>TM0066(kdgA) Score=6 Pos=-23 [Thermotoga maritima MSB8]
TTAAATATCACATATCA
>TM0436(aldH) Score=6.4 Pos=-25 [Thermotoga maritima MSB8]
TGAAACATCAAACATCT
>TM0432(aguE) Score=5.4 Pos=-50 [Thermotoga maritima MSB8]
TGAAGTATCAGACATCA
>TM0433(pelA) Score=6.4 Pos=-29 [Thermotoga maritima MSB8]
TGAAACATCAGATATCT
# TF - HrcA: TM0851
>TM0370(TM0370) Score=5.9 Pos=-16 [Thermotoga maritima MSB8]
TTATCAAAAGAAAAAAATGATTGCTAA
>TM0373(dnaK) Score=5.7 Pos=-179 [Thermotoga maritima MSB8]
TTATCATTCAAACATTTCATTTGCTAT
>TM0851(hrcA) Score=6.5 Pos=-30 [Thermotoga maritima MSB8]
TTAGCACTCAAAAGAAGGGAGTGCTAA
>TM0505(groS) Score=6.6 Pos=-48 [Thermotoga maritima MSB8]
TTAGCAGTCGAATGATGAGAGTGCTAA
# TF - IolR: TM0411
>TM0411(iolR) Score=6 Pos=-39 [Thermotoga maritima MSB8]
GTTGGTTAGTTAACGATAACAAA
# TF - KdgR: TM0065
>TM0064(uxaC) Score=5.9 Pos=-32 [Thermotoga maritima MSB8]
TGAGAAAACCATTTTCAAA
>TM0065(kdgR) Score=5.9 Pos=-88 [Thermotoga maritima MSB8]
TTTGAAAATGGTTTTCTCA
>TM0071(xloE) Score=5.2 Pos=-135 [Thermotoga maritima MSB8]
TTTGAAATAATCTTTTACA
>TM0070(xynB) Score=5.2 Pos=-103 [Thermotoga maritima MSB8]
TGTAAAAGATTATTTCAAA
>TM0060(xtpF) Score=6 Pos=-199 [Thermotoga maritima MSB8]
TGTGAAAGGAACTTTCAAA
>TM0061(xynA1) Score=6 Pos=-138 [Thermotoga maritima MSB8]
TTTGAAAGTTCCTTTCACA
# TF - CelR: TM1218
>TM0300(gloE) Score=6.2 Pos=-74 [Thermotoga maritima MSB8]
ATGAAAATGTTTTCAT
>TM0312(TM0312) Score=5.9 Pos=-49 [Thermotoga maritima MSB8]
ATGAAAACATTTTCAG
>TM0308(celQ) Score=5.6 Pos=-48 [Thermotoga maritima MSB8]
GTGAAAACAGTTTCAT
>TM1223(celE) Score=5.7 Pos=-70 [Thermotoga maritima MSB8]
ATGTAAACATTTTCAC
>TM1848(cbpA) Score=5.9 Pos=-59 [Thermotoga maritima MSB8]
ATGAAAACATTTTCAG
>TM0299(gloR) Score=6.2 Pos=-179 [Thermotoga maritima MSB8]
ATGAAAACATTTTCAT
>TM1524(cel12A) Score=5.9 Pos=-41 [Thermotoga maritima MSB8]
ATGTAAACATTTTCAT
# TF - ManR: TM1224
>TM1227(manB) Score=7.5 Pos=-38 [Thermotoga maritima MSB8]
AAATAAGTAAAGTTTACTAATTA
>TM1746(mtpE) Score=4.5 Pos=-120 [Thermotoga maritima MSB8]
GAATAATTACTCTTCACTTCGTT
>TM1746(mtpE) Score=5.1 Pos=-50 [Thermotoga maritima MSB8]
TTATTAGTAAGTGTTATTTATTA
# TF - NiaR: TM1602
>TM1643(nadB) Score=6.9 Pos=-39 [Thermotoga maritima MSB8]
TTTACAGCAGGTGTAAA
>TM1602(niaR) Score=6.9 Pos=-30 [Thermotoga maritima MSB8]
TTTACAGCAGGTGTAAA
# TF - NrdR: TM1707
>TM0384(nrdG) Score=5.3 Pos=-55 [Thermotoga maritima MSB8]
CCACAATATATTGTGG
>TM0152(TM0152) Score=3.8 Pos=-109 [Thermotoga maritima MSB8]
ATACTACAAAATGTAC
>TM0152(TM0152) Score=5.3 Pos=-140 [Thermotoga maritima MSB8]
ATACAATATATGGTAT
>TM1286(metE) Score=4.3 Pos=-25 [Thermotoga maritima MSB8]
ATACAACAAATGGAGG
>TM1286(metE) Score=4.8 Pos=-55 [Thermotoga maritima MSB8]
ACACAACATGTGGTAT
>TM0384(nrdG) Score=4.1 Pos=-85 [Thermotoga maritima MSB8]
CAACAATTTTTTGAGA
>TM0118(nrdJ) Score=5.3 Pos=-34 [Thermotoga maritima MSB8]
ACACAATATGTTGTTT
>TM0118(nrdJ) Score=4.5 Pos=-64 [Thermotoga maritima MSB8]
CTACCACATGTTGAAT
# TF - RbsR: TM0949
>TM0960(rbsK) Score=5.9 Pos=-34 [Thermotoga maritima MSB8]
TTTCGAAAACGATTTCATCA
>TM0960(rbsK) Score=6.5 Pos=-46 [Thermotoga maritima MSB8]
TTGTGAAAACGATTTCGAAA
# TF - Rex1: TM1427
>TM1420(TM1420) Score=6.6 Pos=-95 [Thermotoga maritima MSB8]
TTGTGAAGTAGGTAACAA
# TF - Rex: TM0169
>TM0983(TM0983) Score=5.1 Pos=-41 [Thermotoga maritima MSB8]
TTGAGATTTTTTTCACAA
>TM0379(noxE) Score=5 Pos=-32 [Thermotoga maritima MSB8]
TCGTGAAAAATTTCTCTT
>TM1814(cas6) Score=4.9 Pos=-40 [Thermotoga maritima MSB8]
ATGATAAAATTATCACAA
>TM0179(TM0179) Score=4.6 Pos=-30 [Thermotoga maritima MSB8]
TTGTTATAATAGTAACAA
>TM0228(hycF) Score=5.3 Pos=-499 [Thermotoga maritima MSB8]
TTGTGAAATTTTTGACGA
>TM1420(TM1420) Score=5 Pos=-45 [Thermotoga maritima MSB8]
TaGTGAAAAaTaTaACgt
>TM0012(hycA) Score=4.3 Pos=-27 [Thermotoga maritima MSB8]
aTGTGAAAAaaaTatCAg
>TM0686(dnaX) Score=5.1 Pos=-104 [Thermotoga maritima MSB8]
TaGTtAtttTTTTCACgA
>TM0201(hycD) Score=5.3 Pos=24 [Thermotoga maritima MSB8]
TTGAGAAATTTATCACAA
>TM1400(sat) Score=5.1 Pos=-47 [Thermotoga maritima MSB8]
TAGTTAAAAAAATAACAA
>TM1586(TM1586) Score=4.9 Pos=-177 [Thermotoga maritima MSB8]
GAGTAAAATATTTCACAA
>TM0423(gldA) Score=5.5 Pos=-52 [Thermotoga maritima MSB8]
TCGTGAAAAATTTAACAA
>TM0012(hycA) Score=5 Pos=-2 [Thermotoga maritima MSB8]
TTGTGAAAAaaTTCcCgA
# TF - RhaR: TM1069
>TM1070(rhaM2) Score=6.7 Pos=-56 [Thermotoga maritima MSB8]
TTGTGATTAATTTATGATAA
>TM1067(rtpE) Score=6.1 Pos=-74 [Thermotoga maritima MSB8]
TGTTGATATTATATTGATAA
>TM1069(rhaR) Score=4.4 Pos=-71 [Thermotoga maritima MSB8]
TTATCATAAATTAATCACAA
# TF - TM1030: TM1030
>TM1028(TM1028) Score=7.1 Pos=-34 [Thermotoga maritima MSB8]
ATTTGACTGACCAGTCAATC
# TF - TreR: TM0393
>TM0392(treT) Score=6.1 Pos=-38 [Thermotoga maritima MSB8]
ATTAATTCAAGTTACGAATAAAT
# TF - UgpR: TM1856
>TM1856(ugpR) Score=6.5 Pos=-30 [Thermotoga maritima MSB8]
ATATGTAAGCGCTTACAGGA
# TF - XylR: TM0110
>TM0309(xtpN) Score=5.4 Pos=-45 [Thermotoga maritima MSB8]
GAAATTTCTTTAGAGGAAAAAAT
>TM0070(xynB) Score=5.8 Pos=-189 [Thermotoga maritima MSB8]
ATTTTTTCCTTTCGGGAAATATT
>TM0071(xloE) Score=5.8 Pos=-53 [Thermotoga maritima MSB8]
AATATTTCCCGAAAGGAAAAAAT
>TM0061(xynA1) Score=5.8 Pos=-87 [Thermotoga maritima MSB8]
ATTTTTTCTTTACAAAAAATAAC
>TM0060(xtpF) Score=5.8 Pos=-254 [Thermotoga maritima MSB8]
GTTATTTTTTGTAAAGAAAAAAT
>TM0110(xylR) Score=5.4 Pos=-61 [Thermotoga maritima MSB8]
ATTATTTCCTGCATATAATTAAT
>TM1667(xylA) Score=5 Pos=-38 [Thermotoga maritima MSB8]
ATAATTGATTGATAGAAAAAATT
# TF - Zur: TM0122
>TM0122(zur) Score=7 Pos=-31 [Thermotoga maritima MSB8]
TTGCAAATGCTTTGCATTTGCAG
# TF - AraR: TM0275
>TM0280(glsA) Score=5.9 Pos=-44 [Thermotoga maritima MSB8]
AATAATGTACGTACCTAAAT
>TM0278(araF) Score=4.7 Pos=-1396 [Thermotoga maritima MSB8]
ccAtcGGTACGTACCgTTAT
>TM0276(araA) Score=4.7 Pos=-164 [Thermotoga maritima MSB8]
ATAACGGTACGTACCGATGG
>TM0276(araA) Score=6.3 Pos=-62 [Thermotoga maritima MSB8]
ATAATGGTACGTACTTTTAT
>TM0278(araF) Score=6.3 Pos=-1498 [Thermotoga maritima MSB8]
ATAAAaGTACGTACCaTTAT
# TF - Fur: TM1776
>TM0417(ftr) Score=4.9 Pos=-68 [Thermotoga maritima MSB8]
ATTGAGAATAATGATAAAC
>TM0807(tdxH) Score=5.6 Pos=-57 [Thermotoga maritima MSB8]
ATTGAGAATGGATATCAAA
>TM0050(feoA) Score=6.4 Pos=-35 [Thermotoga maritima MSB8]
TTTGAGAATCATTCTCAAA
>TM0386(bcp) Score=6 Pos=-38 [Thermotoga maritima MSB8]
ATTGAGAATTAGTTTCAAC
>TM0180(TM0180) Score=5.4 Pos=-52 [Thermotoga maritima MSB8]
TTTGAGAAACAATTTCAAA
# TF - GalR: TM1200
>TM1199(ltpE) Score=5.4 Pos=-53 [Thermotoga maritima MSB8]
ACGTGAACGTTCACGG
>TM1204(ganE) Score=5.6 Pos=-51 [Thermotoga maritima MSB8]
ACGGTAACGTTTACGT
# TF - ZnuR: TM0126
>TM0122(zur) Score=6.9 Pos=-143 [Thermotoga maritima MSB8]
TATACCATAATACGGTATA
# TF - ArgR: TM0371
>TM1780(argG) Score=6.7 Pos=-37 [Thermotoga maritima MSB8]
ATAATTATGCTATCAAGAA
>TM0371(argR) Score=6.7 Pos=-60 [Thermotoga maritima MSB8]
ATATTTATGCTATATATAT
# TF - UgtR: TM1228
>TM1235(ugtE) Score=6.2 Pos=-80 [Thermotoga maritima MSB8]
GTAGAAAATTTTCTAT
# TF - PhoB: TM1259
>TM1264(pstS) Score=7.7 Pos=-89 [Thermotoga maritima MSB8]
CTTAACA---CTTAACA
# TF - UctR: TM0326
>TM0322(uctP) Score=6.5 Pos=-34 [Thermotoga maritima MSB8]
GAAAAAAATATTTTTAAC
# TF - TM0766: 1654
>TM0766(TM0766) Score=7.4 Pos=-36 [Thermotoga maritima MSB8]
GTGTAATAGTATAATATTACAG
# RNA - FMN
>TM1828(ribD) Score=115.1 Pos=-61 [Thermotoga maritima MSB8]
GATGTGGAGGTTATATGGGACCCGAGAGGGTCCCTTTTCTTTTACACAGGGAGGGTGTTGTATGTATGAAACTTTCATGAAAAGAGCGATAGAGCTTGCAAAGAAAGGACTTGGAAGGGTGAA
# RNA - TPP
>TM0787(thi4) Score=69.8 Pos=-154 [Thermotoga maritima MSB8]
CCTTCCCCAGGGGGAGCTCCTATTCCGGGGCTGAGAGGAGGACGGAAGTCCTCGACCCCAAGAACCTGATCCGGGTAATGCCGGCGGAGGGATCGGGGAAGGAGGAAATAA
# RNA - Cobalamin
>TM0080(btuF) Score=95 Pos=-158 [Thermotoga maritima MSB8]
GTATGATTTTCAAATAGAAGCCTCCCTCACCGTGCGGTACCCTTCGGGGTTCAAAGGGGAAGCCGGTGAAAATCCGGCGCGGGGCCGCCACCGTGACCGGGGACGAAACCCGCAGAACGCCACTGGGGCGATCACCCTGGGAAGGCGCGGGGAGTAGGATGATCCGGAAGCCGGGAAACCCGCCCGCGGTGAAGGGGAACCA
# RNA - Lysine
>TM1523(asd) Score=90.7 Pos=-261 [Thermotoga maritima MSB8]
TTGACCCGACGGAGGCGCGCCCGAGATGAGTAGGCTGTCCCATCAGGGGAGGAATCGGGGACGGCTGAAAGGCGAGGGCGCCGAAGGGTGCAGAGTTCCTCCCGCTCTGCATGCCTGGGGGTATGGGGAATACCCATACCACTGTCACGGAGGTCTCTCCGTGGAGAGCCGATCGG
# RNA - L10_leader
>TM0456(rplJ) Score=36.7 Pos=-133 [Thermotoga maritima MSB8]
GAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCGTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTGGGAGGTGA
# RNA - L20_leader
>TM1590(infC) Score=46 Pos=-213 [Thermotoga maritima MSB8]
AAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGGGCAAGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCAAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATGACTGA
# TF - PuuR: TM0656
>TM0656(puuR) Score=4.8 Pos=-58 [Thermotoga maritima MSB8]
ATGTCTGTGATACTGAACAA
>TM0656(puuR) Score=6.8 Pos=-36 [Thermotoga maritima MSB8]
TTGTCAACTATAGTGGACAA