# TF - TrpR: PBPRA0642
>PBPRA2485(aroF2) Score=6.3 Pos=-274 [Photobacterium profundum SS9]
CGAACTAGTTTACTAGTACG
>PBPRA2452(aroA) Score=4.7 Pos=-71 [Photobacterium profundum SS9]
GGTACTAGCGAACTGATGCA
# TF - FabR: PBPRA3467
>PBPRA0468(plsC) Score=5.2 Pos=-30 [Photobacterium profundum SS9]
AGCGAACGCTTGTACGCT
>PBPRA0957(fadL) Score=4.8 Pos=-222 [Photobacterium profundum SS9]
AGAGTACAGTTGAACGCT
>PBPRA0957(fadL) Score=4.5 Pos=-190 [Photobacterium profundum SS9]
CAGGTACACATGTACGCT
>PBPRB0742(OLE1) Score=5.4 Pos=-38 [Photobacterium profundum SS9]
AGCGCACACATGTACGCT
>PBPRA0424(lcfH) Score=6.3 Pos=-35 [Photobacterium profundum SS9]
AGCTTACAAGTGTAAGCT
>PBPRA3584(hyIII) Score=5.7 Pos=-71 [Photobacterium profundum SS9]
AGCTTACACGTGTACCCT
>PBPRA1773(fabA) Score=6.5 Pos=-56 [Photobacterium profundum SS9]
AGCGTACACGTGTACGCT
# TF - NsrR: PBPRA3342
>PBPRB0907(nnrS) Score=5.1 Pos=-48 [Photobacterium profundum SS9]
GGTGTATCATTTATGCATG
>PBPRA3342(nsrR) Score=5.1 Pos=-88 [Photobacterium profundum SS9]
GTTATATTTATAATGCACC
>PBPRA2631(tehB) Score=5 Pos=-80 [Photobacterium profundum SS9]
GATGTATTATTTACACATC
>PBPRA1144(norV) Score=5.7 Pos=-95 [Photobacterium profundum SS9]
CATGTATTATTTATACATG
>PBPRA1144(norV) Score=4.6 Pos=-43 [Photobacterium profundum SS9]
CATGCATTCAAAATACGAG
>PBPRA3343(hmp) Score=5.1 Pos=-33 [Photobacterium profundum SS9]
GGTGCATTATAAATATAAC
# TF - HexR: PBPRA2430
>PBPRA2602(gapA) Score=4.5 Pos=-55 [Photobacterium profundum SS9]
TGTAATTTTACCACC
>PBPRA0265(ppc) Score=4.9 Pos=-28 [Photobacterium profundum SS9]
TGTAACAAAATTACG
>PBPRA0265(ppc) Score=4 Pos=-163 [Photobacterium profundum SS9]
CGAAATAAAGTTTCA
>PBPRA1428(nirB) Score=5.2 Pos=-174 [Photobacterium profundum SS9]
TGTAATTTAGTTACA
>PBPRA2224(dld) Score=4.8 Pos=-389 [Photobacterium profundum SS9]
CGTTATTTAATTACA
>PBPRA0224(gpmM) Score=5.4 Pos=-93 [Photobacterium profundum SS9]
TGTAGTAAAATTACA
>PBPRA0737(aceB) Score=5.2 Pos=-303 [Photobacterium profundum SS9]
GGTAATTAAATTACG
>PBPRA0833(pepD) Score=5 Pos=-713 [Photobacterium profundum SS9]
CGTAACTTAATTACA
>PBPRA0833(pepD) Score=4.5 Pos=-639 [Photobacterium profundum SS9]
TGAAAGTTTATTACA
>PBPRB0363(mtlA) Score=4.6 Pos=-210 [Photobacterium profundum SS9]
TGTAATTCACTTACA
>PBPRA3328(pgi) Score=4.2 Pos=-135 [Photobacterium profundum SS9]
AGTTGTAAAATTACA
>PBPRB0412(glgX) Score=4.7 Pos=-336 [Photobacterium profundum SS9]
CGTAATAAAAATACG
>PBPRB0405(glgC) Score=4.6 Pos=-146 [Photobacterium profundum SS9]
TGAAATGAAATTACA
>PBPRB0405(glgC) Score=4.3 Pos=-99 [Photobacterium profundum SS9]
TGTAATTATACATCA
>PBPRA0235(tpiA) Score=4.5 Pos=-18 [Photobacterium profundum SS9]
TTTAGTTAATTTACA
>PBPRA0556(grcA) Score=5.4 Pos=-234 [Photobacterium profundum SS9]
TGTAATTTTACTACA
>PBPRA1203(ptsG) Score=5.1 Pos=-298 [Photobacterium profundum SS9]
TGAAATTTTATTACA
>PBPRA1203(ptsG) Score=4.8 Pos=-176 [Photobacterium profundum SS9]
TGAAATTAAATTTCA
>PBPRA2430(hexR) Score=5.1 Pos=-225 [Photobacterium profundum SS9]
TGAAATTAAACTACA
>PBPRA2430(hexR) Score=4.4 Pos=-80 [Photobacterium profundum SS9]
AGTAGTATAATTTCA
>PBPRA2357(lctP) Score=4.6 Pos=-428 [Photobacterium profundum SS9]
CGTAATTTTACGACA
>PBPRA2223(lctP) Score=4.1 Pos=-437 [Photobacterium profundum SS9]
TGTAATATAACACCA
>PBPRA2431(pykA) Score=4.8 Pos=-75 [Photobacterium profundum SS9]
TGTAGTAATATTTCA
>PBPRB1262(eda) Score=5.1 Pos=-137 [Photobacterium profundum SS9]
TGTAATTTTATTTCA
>PBPRA0542(gltB) Score=4.3 Pos=-295 [Photobacterium profundum SS9]
TGTAGGATAGTTACA
# TF - ArgR: PBPRA0390
>PBPRA0266(argC) Score=3.8 Pos=-39 [Photobacterium profundum SS9]
AAAGCTTTAACAATCAAA
>PBPRA0266(argC) Score=3.8 Pos=-260 [Photobacterium profundum SS9]
TAAACATATTAATTCAGA
>PBPRA0596(carA) Score=4.4 Pos=-28 [Photobacterium profundum SS9]
ATTGCATTTTTATTTTTT
# TF - BirA: PBPRA3445
>PBPRA2330(bioA) Score=5.8 Pos=-36 [Photobacterium profundum SS9]
cgaTAAAtC---------------GGTTgAaAg
>PBPRA2329(bioB) Score=7.5 Pos=-149 [Photobacterium profundum SS9]
aTGTAAACC---------------taTTgACAg
# TF - NrdR: PBPRA0796
>PBPRB0442(nrdD) Score=4.8 Pos=-51 [Photobacterium profundum SS9]
AGCCTATATTTTGTGT
>PBPRB0442(nrdD) Score=4.7 Pos=-82 [Photobacterium profundum SS9]
ACACCACATGTTGTAT
>PBPRA2459(nrdA) Score=4 Pos=-151 [Photobacterium profundum SS9]
CATCACTATCTTGTAA
>PBPRA2459(nrdA) Score=5.5 Pos=-119 [Photobacterium profundum SS9]
CCCCAATATGTAGTGT
# TF - Zur: PBPRA3326
>PBPRA1054(znuC) Score=6 Pos=-55 [Photobacterium profundum SS9]
GTGATGTTATAATATAACACCTT
>PBPRA1055(znuA) Score=5.6 Pos=24 [Photobacterium profundum SS9]
AAGGTGTTATATTATAACATCAC
>PBPRA0375(VC2551) Score=6.2 Pos=-25 [Photobacterium profundum SS9]
GTAATGTTATATTATTACATTAC
>PBPRA0374(zbp) Score=6.2 Pos=-376 [Photobacterium profundum SS9]
GTAATGTTATATTATTACATTAC
# TF - PdhR: PBPRA3197
>PBPRA3197(pdhR) Score=6.2 Pos=-80 [Photobacterium profundum SS9]
ATTGGTAAGACCAAT
# TF - FadR: PBPRA2608
>PBPRA1773(fabA) Score=3.3 Pos=-74 [Photobacterium profundum SS9]
CACTGATCCGAGTTGTT
>PBPRA0064(fadB) Score=5.5 Pos=-59 [Photobacterium profundum SS9]
AACAGGTCAAACCAGTT
>PBPRA2915(fadE2) Score=5.3 Pos=-127 [Photobacterium profundum SS9]
AAGTGGTAAGACCTCTT
>PBPRA2594(fadH) Score=5.2 Pos=-36 [Photobacterium profundum SS9]
TACTGGTCAGACCATAA
>PBPRA0958(fadL) Score=5 Pos=-101 [Photobacterium profundum SS9]
AACTGGTCAGATTTGAT
>PBPRA0961(fadI) Score=4.9 Pos=-91 [Photobacterium profundum SS9]
TTGTGGTCTGACCTCTA
# TF - PrpR: PBPRB0234
>PBPRB0234(prpR) Score=4.9 Pos=-97 [Photobacterium profundum SS9]
ATTGTTAACAAT
>PBPRB0234(prpR) Score=5.4 Pos=-34 [Photobacterium profundum SS9]
ATTGTTGACAAT
>PBPRB0234(prpR) Score=4.8 Pos=-202 [Photobacterium profundum SS9]
ATTGTCTACAGT
>PBPRB0234(prpR) Score=5.1 Pos=-130 [Photobacterium profundum SS9]
ACTGTCGACAAT
# TF - HutC: PBPRA2169
>PBPRA2170(hutI) Score=5.3 Pos=-68 [Photobacterium profundum SS9]
TTATTTGTATATACATATTG
>PBPRA2169(hutC) Score=5.2 Pos=-32 [Photobacterium profundum SS9]
TTATTTGTATAGGCAATTAT
# TF - IscR: PBPRA0749
>PBPRA0177(nfuA) Score=5.3 Pos=-37 [Photobacterium profundum SS9]
AAATCTTACTAAATAGGTCAGGTAT
>PBPRA0749(iscR) Score=7.1 Pos=-66 [Photobacterium profundum SS9]
ATACTTGACCATTTTAGTCGGGTAT
>PBPRA0749(iscR) Score=6.4 Pos=-91 [Photobacterium profundum SS9]
AAACCTGACTAAAATCGTCAGGTAA
>PBPRA0531(erpA) Score=7.1 Pos=-68 [Photobacterium profundum SS9]
ATACTTGAACAAGTTAGTCAGGTAT
# TF - NagC: PBPRA1029
>PBPRB0360(nagB) Score=5.5 Pos=-60 [Photobacterium profundum SS9]
CTTATTTTACAATGAAAATAATG
>PBPRA0868(ybfM) Score=4.9 Pos=-105 [Photobacterium profundum SS9]
TATTTTTCGAAGAATAAATTAAG
>PBPRA0556(grcA) Score=4.7 Pos=-204 [Photobacterium profundum SS9]
TATTTTTTAAACTTTAAACTAAC
>PBPRA2603(aldE) Score=5.5 Pos=-108 [Photobacterium profundum SS9]
GATATTTTTAAACGAAAAATAAG
>PBPRA1207(tfoX1) Score=4.8 Pos=-163 [Photobacterium profundum SS9]
CTTATTTCGCGTTAAATAATATG
>PBPRA1724(gapB) Score=5.3 Pos=-250 [Photobacterium profundum SS9]
CTTATATTTCATCAAAAAATAAG
>PBPRA2790(ompC) Score=4.9 Pos=-338 [Photobacterium profundum SS9]
CATAATTCGCGATAAAAAAATAG
>PBPRA2790(ompC) Score=5.1 Pos=-293 [Photobacterium profundum SS9]
ATTATTTCACGGCGTGAAATAAG
>PBPRB0407(mcp2) Score=4.6 Pos=-134 [Photobacterium profundum SS9]
TTTTATTTCACTCAAAAATTAAC
>PBPRA1032(nagE2) Score=5 Pos=-202 [Photobacterium profundum SS9]
TTTGTTTCGAATCATAAAATAAT
>PBPRA1032(nagE2) Score=4.8 Pos=-108 [Photobacterium profundum SS9]
TTTAATTTGCGGAGCGAAATTAA
>PBPRA1031(nagB) Score=4.8 Pos=-171 [Photobacterium profundum SS9]
TTAATTTCGCTCCGCAAATTAAA
>PBPRA1031(nagB) Score=5 Pos=-77 [Photobacterium profundum SS9]
ATTATTTTATGATTCGAAACAAA
>PBPRB0765(nagA) Score=5.3 Pos=-131 [Photobacterium profundum SS9]
CTTATTTTCTATCGAGAATTAAG
>PBPRA0863(ptsH) Score=5.2 Pos=-216 [Photobacterium profundum SS9]
TTTATTTTAAGCATCGAAATAAA
>PBPRA3080(pyrG) Score=4.8 Pos=-129 [Photobacterium profundum SS9]
ATTGATTTGAGACAAAAAAAAAC
>PBPRA1203(ptsG) Score=4.3 Pos=-335 [Photobacterium profundum SS9]
GTATCTTCGTTACGTAAAATAAC
>PBPRA3132(epd) Score=5.2 Pos=-232 [Photobacterium profundum SS9]
TTTAATTTGCAGTGTGAAAAAAA
>PBPRA2110(tfoX) Score=4.7 Pos=-169 [Photobacterium profundum SS9]
TATTATTTGTGTCTTAAATAATA
>PBPRB0312(cbp) Score=4.7 Pos=-30 [Photobacterium profundum SS9]
GTTGTTTTTTTCTATAAAACAAC
# TF - SiaR: PBPRA2286
>PBPRA2281(siaP) Score=4.8 Pos=-118 [Photobacterium profundum SS9]
TTTGAAGAAAACCTTCATA
>PBPRA2287(nanA) Score=5.1 Pos=-38 [Photobacterium profundum SS9]
TGTGAAGTTTAACTTCGCT
>PBPRA2286(siaR) Score=5.3 Pos=-83 [Photobacterium profundum SS9]
TATGGAGTTTAGCTTCACA
>PBPRA2285(nanE) Score=5.5 Pos=-78 [Photobacterium profundum SS9]
GGTGGAGTTAAACTTCATT
>PBPRA2285(nanE) Score=5.2 Pos=-105 [Photobacterium profundum SS9]
GTTGAAGTAAAACTTCATC
>PBPRA2285(nanE) Score=5 Pos=-226 [Photobacterium profundum SS9]
TATGGAGTTAGGCTCCATT
# TF - NtrC: PBPRA3495
>PBPRA3492(glnA) Score=5.1 Pos=-199 [Photobacterium profundum SS9]
CGCACCATAATAGGGCG
>PBPRA3186(glnK) Score=5.5 Pos=-140 [Photobacterium profundum SS9]
TGCATCATATTGGTGCG
>PBPRA3494(ntrB) Score=5.9 Pos=-66 [Photobacterium profundum SS9]
TGCACCAATATGGTGCG
# TF - Fur: PBPRA1035
>PBPRA2593(COG0778) Score=4.3 Pos=-19 [Photobacterium profundum SS9]
TTGTAAGAGCAATTATTATTT
>PBPRA2102(hutW) Score=5.8 Pos=-287 [Photobacterium profundum SS9]
AAATAAGATTGATTATCATTT
>PBPRB1034 Score=4.9 Pos=-141 [Photobacterium profundum SS9]
TAATACAAATAATAATTATTT
>PBPRB1812(viuB) Score=5.9 Pos=-45 [Photobacterium profundum SS9]
AAATGATAATGGTTTTCATTA
>PBPRB1034 Score=5.9 Pos=-135 [Photobacterium profundum SS9]
AAATAATAATTATTTTCATTA
>PBPRA2102(hutW) Score=5.4 Pos=-342 [Photobacterium profundum SS9]
GAATAATATCAATTATCATTT
>PBPRA3184(fbpA) Score=5.5 Pos=-2 [Photobacterium profundum SS9]
TATTGATAATTGTTATCATTG
>PBPRB1817(fecB) Score=5.3 Pos=-69 [Photobacterium profundum SS9]
AAATAAAAATAGTTATCAATC
>PBPRB1905(feoA) Score=5.2 Pos=-97 [Photobacterium profundum SS9]
AAACTATAATAGTTATCATTT
>PBPRA1535(hutA) Score=5.3 Pos=-79 [Photobacterium profundum SS9]
TAACGATAGTAATTCTCATTT
>PBPRB0614(VCA1041) Score=5.7 Pos=-63 [Photobacterium profundum SS9]
TAATGCGAATGAATATCATTT
>PBPRB2013(PF11449) Score=5.7 Pos=-77 [Photobacterium profundum SS9]
ACTTGATAATAATTCTCATTT
>PBPRB2013(PF11449) Score=4.4 Pos=-71 [Photobacterium profundum SS9]
TAATAATTCTCATTTGCATTT
>PBPRB1172(VV20793) Score=5.9 Pos=-54 [Photobacterium profundum SS9]
AATTGATAATGAATATCATTA
>PBPRA1058(feoA) Score=5.6 Pos=-36 [Photobacterium profundum SS9]
AAATACTAATAATTCTTATTA
>PBPRA1567 Score=5.4 Pos=-160 [Photobacterium profundum SS9]
TAATGATAATGATTGTCATCT
>PBPRA2569(sodA) Score=5.4 Pos=-54 [Photobacterium profundum SS9]
TAATGCGAGTAATTATCATTA
>PBPRA0166(COG3315) Score=5.4 Pos=-45 [Photobacterium profundum SS9]
TAATGATAGTCATTATCATCT
>PBPRB1816(PBPRB1816) Score=5.3 Pos=-121 [Photobacterium profundum SS9]
GATTGATAACTATTTTTATTT
>PBPRB1864(COG2910) Score=4.6 Pos=-46 [Photobacterium profundum SS9]
TAATACGAATTAGAATCATTA
>PBPRB1825(COG4771) Score=5.5 Pos=-43 [Photobacterium profundum SS9]
TAACGATAATAATTATCATTC
>PBPRA0317(bfd) Score=5.1 Pos=-59 [Photobacterium profundum SS9]
AAATGCAAACGATTCTCGTTT
>PBPRB0694(PF11932) Score=5.6 Pos=-98 [Photobacterium profundum SS9]
AAATGAGATTCATTTTCAATT
>PBPRB0694(PF11932) Score=4.4 Pos=-20 [Photobacterium profundum SS9]
AAATACTATTGATGAGCAATA
>PBPRB1222(fhuE) Score=5.7 Pos=-160 [Photobacterium profundum SS9]
AAATGCTAACAATTATCACTT
>PBPRA2103(tonB-hmu) Score=5.8 Pos=-196 [Photobacterium profundum SS9]
AAATGATAATCAATCTTATTT
>PBPRA2103(tonB-hmu) Score=5.4 Pos=-141 [Photobacterium profundum SS9]
AAATGATAATTGATATTATTC
>PBPRA1259(nrfB) Score=4.8 Pos=-208 [Photobacterium profundum SS9]
TAATGAGAATGGGTGTCAATT
>PBPRA1259(nrfB) Score=5.1 Pos=-191 [Photobacterium profundum SS9]
AATTGCAAATGGTTTTTATTT
>PBPRB0979(ptrB) Score=5 Pos=-73 [Photobacterium profundum SS9]
AAATGAGAATCATTCTTGATC
>PBPRA2792(COG3016) Score=5.4 Pos=-190 [Photobacterium profundum SS9]
TATTGATATTGATTATCAGTT
>PBPRA2792(COG3016) Score=4.9 Pos=-167 [Photobacterium profundum SS9]
ATTTGATAATCAATATCAACT
>PBPRA3532(VC0074) Score=5.2 Pos=-19 [Photobacterium profundum SS9]
AACTGATAATGATTAGCGTTT
>PBPRA1566(fhuA) Score=4.7 Pos=-138 [Photobacterium profundum SS9]
CAATGATAGTAGTTATCATTG
>PBPRB1213(PF03929) Score=5.3 Pos=-87 [Photobacterium profundum SS9]
CAATGAAAACGATTATCAATT
# TF - UxuR: PBPRB1510, PBPRB1875
>PBPRB1875(uxuR) Score=5.4 Pos=-153 [Photobacterium profundum SS9]
AAAGAGGTTGACCAATTT
>PBPRB1878(uxuQ) Score=5.2 Pos=-54 [Photobacterium profundum SS9]
ACATTGGTTAACCAAACG
>PBPRB1877(uxuP) Score=4.6 Pos=-192 [Photobacterium profundum SS9]
CGTTTGGTTAACCAATGT
>PBPRB1877(uxuP) Score=5.2 Pos=-45 [Photobacterium profundum SS9]
ATATAGGTCAACCAATTG
>PBPRB1877(uxuP) Score=5.7 Pos=-79 [Photobacterium profundum SS9]
GAATTGGTTGACCAATAT
>PBPRB1878(uxuQ) Score=5.6 Pos=-167 [Photobacterium profundum SS9]
ATATTGGTCAACCAATTC
>PBPRB1878(uxuQ) Score=5.1 Pos=-201 [Photobacterium profundum SS9]
CAATTGGTTGACCTATAT
>PBPRB1515(uxaC) Score=4.4 Pos=-61 [Photobacterium profundum SS9]
CCATAGGTTCACCAATCT
# TF - KdgR: PBPRB1738
>PBPRB1737(kduD) Score=5.6 Pos=-194 [Photobacterium profundum SS9]
TTTTAAAAAGCCTTTTCAAAA
>PBPRB1737(kduD) Score=5.8 Pos=-121 [Photobacterium profundum SS9]
TTTTAAAACGTTATTTCAAAA
>PBPRB1726(kdgM) Score=5.6 Pos=-122 [Photobacterium profundum SS9]
AATTAAAACGCCGTTTCAATG
>PBPRB1726(kdgM) Score=5.8 Pos=-32 [Photobacterium profundum SS9]
AATTAAAACGGCGTTTTAAAA
>PBPRB1723(togX1) Score=5.5 Pos=-149 [Photobacterium profundum SS9]
AAATGAACCGTTGTTTCGATT
>PBPRB1723(togX1) Score=5.3 Pos=-85 [Photobacterium profundum SS9]
AATTAAAACGGCGTTTCGAGG
>PBPRB1731(kduI) Score=5.4 Pos=-124 [Photobacterium profundum SS9]
TTTTGAAACGATGTATCAATA
>PBPRB1738(kdgR) Score=5.7 Pos=-158 [Photobacterium profundum SS9]
TTTTGAAATAACGTTTTAAAA
>PBPRB1738(kdgR) Score=5.6 Pos=-85 [Photobacterium profundum SS9]
TTTTGAAAAGGCTTTTTAAAA
>PBPRB1733(kdgK) Score=5.4 Pos=-81 [Photobacterium profundum SS9]
TTATGAACCGATGTTTTATTT
# TF - FruR: PBPRA1572
>PBPRA1573(fruB) Score=5.5 Pos=-240 [Photobacterium profundum SS9]
GCTGAAACGATTCAGT
>PBPRA1573(fruB) Score=5.2 Pos=-218 [Photobacterium profundum SS9]
GCTGAAAGGTTTCAGC
>PBPRA1573(fruB) Score=5.5 Pos=-151 [Photobacterium profundum SS9]
GCTGAAACGATTCAGC
>PBPRA1572(fruR) Score=5.6 Pos=-205 [Photobacterium profundum SS9]
GCTGAATCGTTTCAGC
>PBPRA1572(fruR) Score=5 Pos=-138 [Photobacterium profundum SS9]
GCTGAAACCTTTCAGC
>PBPRA1572(fruR) Score=5.2 Pos=-116 [Photobacterium profundum SS9]
ACTGAATCGTTTCAGC
# TF - PurR: PBPRA2109
>PBPRA2764(fhs) Score=5.3 Pos=-96 [Photobacterium profundum SS9]
GCGCAAACGATTGCGT
>PBPRA1026(gsk) Score=5.2 Pos=-124 [Photobacterium profundum SS9]
TAGCAAAGGTTTGCGT
>PBPRA0186(xanP) Score=5.8 Pos=-187 [Photobacterium profundum SS9]
AAGCAAACGTTTGCTA
>PBPRA3419(purH) Score=5.9 Pos=-168 [Photobacterium profundum SS9]
GAGCAAACGTTTGCGT
>PBPRA0795(glyA) Score=6.1 Pos=-94 [Photobacterium profundum SS9]
ACGAAAACGTTTGCGT
>PBPRA2909(upp) Score=5.7 Pos=-126 [Photobacterium profundum SS9]
AGGGAAACGTTTGCGT
>PBPRA2641(folD) Score=5.8 Pos=-86 [Photobacterium profundum SS9]
AAGCAAACGTTTGCGC
>PBPRA1469(purC) Score=6.1 Pos=-143 [Photobacterium profundum SS9]
AGGCAAACGTTTGCTT
>PBPRA0780(guaB) Score=4.9 Pos=-82 [Photobacterium profundum SS9]
AGCCAAACGATTGCTT
>PBPRA0781(guaA) Score=5.9 Pos=-91 [Photobacterium profundum SS9]
ACGAAAACGTTTGCCT
>PBPRA2910(purM) Score=5.6 Pos=-79 [Photobacterium profundum SS9]
ACGCAAACGTTTCCCT
>PBPRA1685(purT) Score=6.1 Pos=-73 [Photobacterium profundum SS9]
AGGCAAACGTTTGCGT
>PBPRA0788(purL) Score=5.6 Pos=-198 [Photobacterium profundum SS9]
GCGCAAACGGTTGCGT
>PBPRA2649(cvpA) Score=5.8 Pos=-63 [Photobacterium profundum SS9]
AGGTAAACGTTTGCGT
>PBPRA1767(pyrD) Score=5.4 Pos=-184 [Photobacterium profundum SS9]
ACGGAATCGTTTGCGT
# TF - RbsR: PBPRB1561
>PBPRB1556(rbsD) Score=5.7 Pos=-118 [Photobacterium profundum SS9]
CCATCGAAACGTTTGCGTAA
# TF - ModE: PBPRB1554
>PBPRB1349(modA) Score=7.3 Pos=-50 [Photobacterium profundum SS9]
CGATATGTAGTAAGGTATATATCG
# TF - AgaR: PBPRB1036, PBPRB0140
>PBPRB1036(agaR) Score=7.4 Pos=-49 [Photobacterium profundum SS9]
GAAACA--------------CGAAAT
>PBPRB0157(agaY) Score=6.6 Pos=-201 [Photobacterium profundum SS9]
GAAAGG--------------AGAAAG
>PBPRB1036(agaR) Score=7.4 Pos=-146 [Photobacterium profundum SS9]
GAAAGG--------------CGAAAG
>PBPRB0140(agaR2) Score=6.6 Pos=-39 [Photobacterium profundum SS9]
GAAAGA--------------CGTAAG
>PBPRB0140(agaR2) Score=7.3 Pos=-250 [Photobacterium profundum SS9]
GAAAGG--------------TGAAAG
# TF - LexA: PBPRA0165
>PBPRA0694(recN) Score=5.6 Pos=-64 [Photobacterium profundum SS9]
TACTGTACGTAGATACAGTA
>PBPRA0566(xerD) Score=4.4 Pos=-78 [Photobacterium profundum SS9]
TACTGTGTTTATATCCATGC
>PBPRB0973(umuD) Score=5.4 Pos=-4 [Photobacterium profundum SS9]
AACTGTGCATACATACAGTG
>PBPRA0832(dinB) Score=6.1 Pos=-64 [Photobacterium profundum SS9]
TACTGTATATAAAAACAGTT
>PBPRA0165(lexA) Score=5.3 Pos=-65 [Photobacterium profundum SS9]
GACTGTATAAACAAACAGGG
>PBPRA0165(lexA) Score=5.3 Pos=-85 [Photobacterium profundum SS9]
CACTGGATATACTCACAGTA
>PBPRA3068(recA) Score=5.7 Pos=-64 [Photobacterium profundum SS9]
CACTGTATGAATAGACAGTA
>PBPRA1116(ruvA) Score=5 Pos=-65 [Photobacterium profundum SS9]
TGCTGGATATCCATCCAGCA
>PBPRA3290(uvrA) Score=5.4 Pos=-91 [Photobacterium profundum SS9]
TACTGTATCTTTATACAGCA
>PBPRA3513(uvrD) Score=5.4 Pos=-27 [Photobacterium profundum SS9]
CATTGTATAAATAACCAGTA
>PBPRA3003(yebG) Score=5.5 Pos=-38 [Photobacterium profundum SS9]
TACTGTATAAGCAGCCAGTA
>PBPRA2590(topB) Score=5.2 Pos=-88 [Photobacterium profundum SS9]
AACTGTTGTTATATCCAGTA
>PBPRA0115(rmuC) Score=5.4 Pos=-68 [Photobacterium profundum SS9]
TGCTGGACATTTATCCAGTA
>PBPRA0694(recN) Score=5.4 Pos=-42 [Photobacterium profundum SS9]
TACTGTATGAAAACACAGGT
# TF - LiuR: PBPRB1113
>PBPRB1098(etfB) Score=5.6 Pos=-168 [Photobacterium profundum SS9]
GTTGACGTAAACGTAAAT
>PBPRB1099(etfD) Score=5.6 Pos=-66 [Photobacterium profundum SS9]
ATTTACGTTTACGTCAAC
>PBPRB1112(ivdA) Score=5.9 Pos=-117 [Photobacterium profundum SS9]
CTTTACGTTTACGTAAAT
>PBPRB1113(liuR) Score=5.7 Pos=-203 [Photobacterium profundum SS9]
CTTGACGTTTACGTAAGC
>PBPRB1112(ivdA) Score=5.7 Pos=-88 [Photobacterium profundum SS9]
GCTTACGTAAACGTCAAG
>PBPRB1113(liuR) Score=5.9 Pos=-174 [Photobacterium profundum SS9]
ATTTACGTAAACGTAAAG
# TF - EbgR: PBPRA2083
>PBPRA2084(ebgA) Score=4.2 Pos=-53 [Photobacterium profundum SS9]
AAAACTTTAACTAACATAGCT
>PBPRA2084(ebgA) Score=5.9 Pos=-65 [Photobacterium profundum SS9]
ATTTATTTTACTAAAACTTTA
>PBPRA2083(ebgR) Score=5.3 Pos=-191 [Photobacterium profundum SS9]
GATAATTTTACTAAAACATCA
>PBPRA2084(ebgA) Score=5.5 Pos=-332 [Photobacterium profundum SS9]
TTGTATTTTACTAAAATTTAA
>PBPRA2084(ebgA) Score=4.3 Pos=-78 [Photobacterium profundum SS9]
AACAGATTTACCAATTTATTT
# TF - PsrA
>PBPRA2594(fadH) Score=5.5 Pos=-76 [Photobacterium profundum SS9]
ATGTAAACAAATGTTTGAAA
>PBPRA0064(fadB) Score=4.9 Pos=-115 [Photobacterium profundum SS9]
TTTTAAATAAGTGTTGAAAT
>PBPRA0961(fadI) Score=5.7 Pos=-135 [Photobacterium profundum SS9]
AATAAAACATTTGTTTGAAA
>PBPRB0510(fadD) Score=5.4 Pos=-179 [Photobacterium profundum SS9]
AATTATACACTCGTTTAAAA
>PBPRA2573(fadL2) Score=5.5 Pos=-355 [Photobacterium profundum SS9]
TTTAAAACGGTTGTTTTAAA
>PBPRA2339(SO3908) Score=5.5 Pos=-69 [Photobacterium profundum SS9]
AGTTAAACGTATGTTTGAAT
>PBPRA2573(fadL2) Score=5.1 Pos=-373 [Photobacterium profundum SS9]
TTCTAAACGCCCGTTTTATT
>PBPRA0064(fadB) Score=5 Pos=-128 [Photobacterium profundum SS9]
GGTTAAACAATTGTTTTAAA
# TF - RutR: PBPRA2268
>PBPRA2243(xdhA) Score=5.9 Pos=-47 [Photobacterium profundum SS9]
TATTGACTCAAAGGTCAGAA
>PBPRA2243(xdhA) Score=5.6 Pos=-74 [Photobacterium profundum SS9]
AGTTGACTAAAAAGTCAGCT
# TF - NorR2: PBPRB1897
>PBPRB1897(norR2) Score=5.8 Pos=-41 [Photobacterium profundum SS9]
CGATGTAAAAATCACATCA
>PBPRB1896(hcp) Score=5.3 Pos=-146 [Photobacterium profundum SS9]
CGTTGTAATAACCACATCA
>PBPRB1896(hcp) Score=6.1 Pos=-169 [Photobacterium profundum SS9]
TGATGTAATTATCACATCA
# TF - TreR: PBPRA1223
>PBPRA1224(treB) Score=5.9 Pos=-78 [Photobacterium profundum SS9]
TATTGGGAATGTTCCCATTG
>PBPRA1224(treB) Score=6.6 Pos=-134 [Photobacterium profundum SS9]
TTATGGGAATGTTCCCATTT
# RNA - MOCO_RNA_motif
>PBPRA1124(moaA) Score=86.6 Pos=-140 [Photobacterium profundum SS9]
AGCTGCCATAACTCCGAGCTTTAGTCACTACGTTTTCTGCTTTTCTTAAATTCAGAATATATGTGTTCAGAGCCAGTGACATACTGTCACCAGGGTCAATTTAGAAATGAATCGGCCTCCCGTATTTGGAAAGGTGTTCCATGGCGCAACAATT
# RNA - FMN
>PBPRB0898(ribB) Score=99.5 Pos=-330 [Photobacterium profundum SS9]
TCTGAATTCTCAGGGCGGGGCGCAATTCCCCACCGGCGGTAATTCAGAGCACTCAATAGTGAGTTAACTGAAAAGCCCGCGAGCGCTTATCTTTTTTATAATGATAAGGTCAGCAGATCTGGTGTAATACTTCCTGTCAGTATGAGTCCAGAGCCGACGGTTATAGTCCGGATGAAAGAGGATCAGT
# RNA - Trp_leader
>PBPRA2485(aroF2) Score=42.5 Pos=-174 [Photobacterium profundum SS9]
TCTCATGGTGGTGGCACTTCTCTATACGGGTTGTGTGATTTGCTGTTCCTAACGGACAGAATAGACATAAGCCCGCCAGATGCGGGCTTTTTCATAC
# RNA - yybP-ykoY
>PBPRA0058(COG2119) Score=71.8 Pos=-202 [Photobacterium profundum SS9]
CCGTTTCCTTTGGGGAGTAGCCTCTCGATCTATCGAGATAATCGTCAACATACTTGAAGCAAAATCTTCATGGCGATTATGACTCACACTAATCCTACTTTAGTGAGTTTGGCGAGACCATTGGTAAACCAGC
>PBPRA2002(ykoY) Score=54.5 Pos=-228 [Photobacterium profundum SS9]
TGCCCCTGTTTGGGGAGTAGTCACCAATTGTTCGTCTGTCGTCATCACGAAGCCCCATGCTTCCGGCAGCCGAGAATGGATTTGTTTCTGTAAAACAGTAAGCACCATTTTGACGAGACCAACGCCATTATTT
# RNA - Purine
>PBPRB1379(add) Score=76.1 Pos=-179 [Photobacterium profundum SS9]
GTAATAATGGGTAAAGTTACTTCGTATAACCCCACTTATAGGGTGTGGGGGTCTCTACCAGAATCCGTAAAATTCTGATTACGAAGAGTTGAGTGATTGAT
# RNA - Lysine
>PBPRA2736(lysW2) Score=117.6 Pos=-254 [Photobacterium profundum SS9]
TAATCAGTAGAGGTGCGCTGCCTATAAGTAACCGTGCGGAGGATGATACCGACGATGCCGGAGAAAGGAGTCAGTGCCGAAGTAACTGTTGTTATCACACTCAGTTGCTGGGTCTGCGTCGAATAGGCGCAGGACTGCCATAGTTTTTTTCCTATGGAGCGCTACCTGAAGGGG
>PBPRA3293(lysC) Score=77.7 Pos=-299 [Photobacterium profundum SS9]
AAAACGGAAGAGGAGCGTTACCCAGGTATTTAGATTGCAGGGCCCCACCCTAAAGCAACCTAAAGAGGGGGAGTAACGCCGAGATATAACTGATTGGGGCTCAGCGATATCGGCTATGAAGGTTGAATCCTTCTGGCTGTCACCTTTTTATGCATAAGTACCATATAAAAAGGTGGGGAGCTTCTGGTTGTAG
>PBPRA1083(lysW) Score=135.3 Pos=-377 [Photobacterium profundum SS9]
CTAAGGGTAGAGGCGCATTGTCTATAAGTAACAAGCTGGAGGGTGATTCCTATGATTGCTTGTGAAAGGAGCCAATGCCGAAGTAAGAAGGCGTTAATCGAACGTTCTTGCTGGGGTTGTATCGAATAGGTGCAACACTGCCATAGTATATAATTACATTAACTATGGAGCGCTACTGTGAGGGG
# RNA - Leu_leader
>PBPRA0419(leuA) Score=34.4 Pos=-201 [Photobacterium profundum SS9]
AAAAAATGAAAAATCGTTTCTCTTTACTCTTAAGCCTCCTCCTTATCGTGAATAATTCGCGCGGGTAGCTTATAGGTGAGAAACACCACATAAGAATCTAAAAACCCGCGCAGTCTGCGCGGGTTTTTGC
# RNA - TPP
>PBPRA0413(thiB) Score=64 Pos=-289 [Photobacterium profundum SS9]
ACCGTTCTCATTGGGGAGCCCGTATTTATACAGATGCACGTAGCAACTAGAGTACAGGCTGAGATTGCATCGCAGAACCCACAGAACCTGAACCAGGTCATGCTGGCGTAGGAATTGAGAAAAGAAGGTCG
>PBPRA0106(thiC) Score=81.8 Pos=-234 [Photobacterium profundum SS9]
GAAACTTGTCGGAGTGCCACATGGCTGAGACCGTATTACGGGATCCGTTGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGAAAATCTTCTGC
>PBPRB0688(thiD) Score=71.4 Pos=-177 [Photobacterium profundum SS9]
AGCTTGTTAGTCGGGGAGCCTTTGGCTGAGACCACTTCGGTGGGACCCGTTGAACCTGATCCAATTAACATTGGCGGAGGGAACTAATAGTAATGCCCT
# RNA - GEMM_RNA_motif
>PBPRA2288(tagA) Score=80 Pos=-187 [Photobacterium profundum SS9]
TATGTAAAGGGCAAACTAGTCGAAAGGCTAGGACGCAAAGCTACCGGTTTAAGGGTTATTAAGACCTATGACAGCGGAGCCGCCATAGC
>PBPRB0312(cbp) Score=59.2 Pos=-155 [Photobacterium profundum SS9]
CACATTGTTGGCAAACTATCCTAAAGGGTAGGACGCAAAGCTTCCGGTCTGTCGACGTCAGTCTATGATAGCGGGGTTACCGTCTT
>PBPRA2110(tfoX) Score=72.5 Pos=-225 [Photobacterium profundum SS9]
ACGAAACAAGGCAAACTATTCGAAAGAATAGGACGCAAAGCTTCCGACCTAAAAGGTATTATTTGTGTCTTAAATAATAAACCTCATGGTAGCGGGGTTGCCGATGG
# RNA - S15
>PBPRA0615(rpsO) Score=81.2 Pos=-60 [Photobacterium profundum SS9]
GTGTCGGCTGAATCAGAGATTGGCGACACAAATTAAAAACATCTAGTATTAGGAAGAGTTATGTCTCTGAATGCAGAAACTAAAGCAGCTATCGTTGCTGAATACGCACAATGCGAAAA
# RNA - Glycine
>PBPRA2132(glyP) Score=73.3 Pos=-197 [Photobacterium profundum SS9]
GAGGAGCCTCTGGAGAGACCCGTTAAATCGGGCGCCGAAGGAGCAAGCTTTCCTTTTTGCTGTTTTAACATGCATGGAAAGTGAAACTCTCAGGCAAAAGGACAGAGGAGATAAGAT
>PBPRA2132(glyP) Score=26.3 Pos=-375 [Photobacterium profundum SS9]
TGAAGATAGCAGGAGAGTGGCATATTATTCGCTAGCAGAATCATTCTGATACGAGTATAAGCCCGCCGAAGAAGTAAGCGTTCTTAAACCGTTTGTTACTGTTCAAACACAAGACGTTAATCTTTCAGGCACTGGATTACATACC
# RNA - Thr_leader
>PBPRA0552(thrA) Score=76.4 Pos=-211 [Photobacterium profundum SS9]
TATCAGCACAACCACAACCACAACCATTATTATTACTGGCACGATTATTCGTGTTGGTGCGGGCTGATACGCATAAGATTCTAAAAAAAAGCCCGCACTTCTTATTAGATGCGGGCTTTTTTTTTAA
# RNA - Cobalamin
>PBPRA3464(btuB) Score=62 Pos=-263 [Photobacterium profundum SS9]
ACTAGCATCGCAGTGCGCTGGTCTGCCAAATATGGCTAGGGAACACGGTGAAATTCCGTGACTGACGCGCAGCGGTGATAGAGAACGAAAGCACACGGACGTAAGTTCCAAACACTGTTTCAGACAATTGCGCAATGCAATCGGTATGAAGCGGGAAGTTGTTGCCTAGGTGGTTACCCAATCATGCTCTTAAGTCCGAAGACCGACCAGTGTACAAAGCAAATCG
# RNA - His_leader
>PBPRA1092(hisG) Score=80.2 Pos=-189 [Photobacterium profundum SS9]
TACATCACCATCATCATCCTGACTAGTCTTTCGGGAGGATACGCCTCACTCTGGAAGACAACCAAAAACTCTTCCAGTGTTTGATAAAATAAAGAATTCAAACCCTCGGAGAGCAACACTTCCGAGGGTTTTTT
# TF - NarP: PBPRA0849
>PBPRA0948(ccmA) Score=4 Pos=-156 [Photobacterium profundum SS9]
TTTTACTATAGGGGTA
>PBPRA2525(nirB3) Score=4.8 Pos=-205 [Photobacterium profundum SS9]
TAACCCTTTAGTAGTA
>PBPRA1259(nrfB) Score=4.8 Pos=-428 [Photobacterium profundum SS9]
TACCCCTTATTGGGTA
>PBPRA1259(nrfB) Score=4.6 Pos=-304 [Photobacterium profundum SS9]
TGCTACTTAAGGGGTA
>PBPRB0331(dmsD) Score=4.5 Pos=-286 [Photobacterium profundum SS9]
TACTCTTTAAGTGGTA
>PBPRB0330(dmsA) Score=4.7 Pos=-93 [Photobacterium profundum SS9]
TACCACTTAAAGAGTA
>PBPRA2524(cysG2) Score=4.9 Pos=-262 [Photobacterium profundum SS9]
TACTACTAAAGGGTTA
>PBPRA3485(pckA) Score=4.7 Pos=-99 [Photobacterium profundum SS9]
TACCCCTTTAGGGTTG
>PBPRA0851(napF) Score=4.4 Pos=-164 [Photobacterium profundum SS9]
TAGCCCTAAGTGGGTA
>PBPRA3391(aspA) Score=4.4 Pos=-143 [Photobacterium profundum SS9]
TACCACTAAAGGGGAG
>PBPRA0850(narQ) Score=4.6 Pos=-168 [Photobacterium profundum SS9]
TACCCACTTAGGGCTA
>PBPRA0850(narQ) Score=4.3 Pos=-65 [Photobacterium profundum SS9]
TAATACTAAAGTATTA
>PBPRA1428(nirB) Score=5.1 Pos=-106 [Photobacterium profundum SS9]
TACCCCTTTAGGGCTA
>PBPRA1258(nrfA) Score=5 Pos=-209 [Photobacterium profundum SS9]
TACCCAATAAGGGGTA
# TF - SoxR: PBPRB1505
>PBPRB1506(PF07690) Score=6.2 Pos=-62 [Photobacterium profundum SS9]
ACCTCAAGTTAACCTGAGGC
>PBPRB1505(soxR) Score=6.2 Pos=-46 [Photobacterium profundum SS9]
GCCTCAGGTTAACTTGAGGT
# TF - ZntR: PBPRA3418
>PBPRA1220(zntA) Score=6.6 Pos=-89 [Photobacterium profundum SS9]
ACCTTGGATTTAACTCCAAGGT
# TF - CueR: PBPRA2823
>PBPRA2824(copA) Score=4.7 Pos=-92 [Photobacterium profundum SS9]
ACCTTACACCAACCAGAAGGT
>PBPRA1006(VCA0262) Score=5.5 Pos=-201 [Photobacterium profundum SS9]
ACCTTACCCTTAGGGAAAGGT
>PBPRA2823(cueR) Score=4.7 Pos=-82 [Photobacterium profundum SS9]
ACCTTCTGGTTGGTGTAAGGT
# TF - GalR: PBPRA2078
>PBPRB1872(mglB) Score=5 Pos=-154 [Photobacterium profundum SS9]
TTGGGGGAACGTTTACATTA
>PBPRA2082(galE) Score=6 Pos=-105 [Photobacterium profundum SS9]
TCGTGGAAACGTTTACACAA
>PBPRA2078(galR) Score=5 Pos=-152 [Photobacterium profundum SS9]
TACTGATAACGATTACAAAA
# TF - CelR: PBPRA0499
>PBPRA0495(celB) Score=6.7 Pos=-150 [Photobacterium profundum SS9]
TCGCGCAACCGGTTGCGCTT
>PBPRA0494(celG) Score=6.4 Pos=-286 [Photobacterium profundum SS9]
AAGCGCAACCGGTTGCGCGA
# TF - VF_1255: PBPRA2146
>PBPRA2147(nhaX) Score=7.6 Pos=-134 [Photobacterium profundum SS9]
CTCATGTAACCGCTTACATGAA
# TF - CelR3: PBPRB2003
>PBPRB2008(celB2) Score=6 Pos=-19 [Photobacterium profundum SS9]
TACGGAAACCGGTTTCCATT
# TF - VIBHAR_07005: PBPRA2039
>PBPRA2039(VIBHAR_07005) Score=6.5 Pos=-47 [Photobacterium profundum SS9]
TGGTGTTATATATCACTATAACAGTA
# TF - VSAK1_25095: PBPRA2242
>PBPRA2276(VSAK1_24895) Score=4.7 Pos=-301 [Photobacterium profundum SS9]
TTGTATACAA
>PBPRA2276(VSAK1_24895) Score=4 Pos=-46 [Photobacterium profundum SS9]
ATGTATACAA
>PBPRA2242(VSAK1_25095) Score=4.8 Pos=-100 [Photobacterium profundum SS9]
TTGTACACAA
>PBPRA2263(PA1517) Score=4.7 Pos=-154 [Photobacterium profundum SS9]
TTGTATACAA
>PBPRA2263(PA1517) Score=4.1 Pos=-323 [Photobacterium profundum SS9]
ATGTACACAA
>PBPRA2264(PA1518) Score=4.1 Pos=-65 [Photobacterium profundum SS9]
TTGTGTACAT
>PBPRA2275(VSAK1_24900) Score=4.7 Pos=-29 [Photobacterium profundum SS9]
TTGTATACAA
>PBPRA2275(VSAK1_24900) Score=4 Pos=-284 [Photobacterium profundum SS9]
TTGTATACAT
>PBPRA2265(PA1519) Score=4.7 Pos=-231 [Photobacterium profundum SS9]
TTGTATACAA
>PBPRA2259(PA1513) Score=3.7 Pos=-91 [Photobacterium profundum SS9]
CGGTATACAA
>PBPRA2264(PA1518) Score=4.7 Pos=-234 [Photobacterium profundum SS9]
TTGTATACAA
# TF - MetJ: PBPRA0260
>PBPRA2837(metT) Score=7.2 Pos=-85 [Photobacterium profundum SS9]
GGATGTTTAGACGTCT
>PBPRA2837(metT) Score=7.1 Pos=-77 [Photobacterium profundum SS9]
AGACGTCTAGAAGTTG
>PBPRA0261(metB) Score=6.1 Pos=-90 [Photobacterium profundum SS9]
GGAAGTGTTGACGTCT
>PBPRA0261(metB) Score=7 Pos=-98 [Photobacterium profundum SS9]
AGACGTCTGGAAGTGT
>PBPRA0261(metB) Score=8.1 Pos=-106 [Photobacterium profundum SS9]
AGACATATAGACGTCT
>PBPRA2239(mtsA) Score=6.6 Pos=-239 [Photobacterium profundum SS9]
AGACGTCTAGATGGAA
>PBPRA0263(metF) Score=7.7 Pos=-82 [Photobacterium profundum SS9]
AGACATATAGACGTCT
>PBPRA0263(metF) Score=7.1 Pos=-74 [Photobacterium profundum SS9]
AGACGTCTAAACGGTT
>PBPRA0260(metJ) Score=5.4 Pos=-106 [Photobacterium profundum SS9]
AGACGTCAACACTTCC
>PBPRA0260(metJ) Score=7.7 Pos=-90 [Photobacterium profundum SS9]
AGACGTCTATATGTCT
>PBPRA1379(metE) Score=5.5 Pos=-196 [Photobacterium profundum SS9]
GGAAGTGTAAACATCT
>PBPRA1379(metE) Score=7.5 Pos=-188 [Photobacterium profundum SS9]
AAACATCTAGACGTCT
>PBPRA3294(metH) Score=6.7 Pos=-77 [Photobacterium profundum SS9]
AGGTATTTAGACGTCT
>PBPRA3294(metH) Score=7.2 Pos=-69 [Photobacterium profundum SS9]
AGACGTCTAGATTTCC
>PBPRA2940(metN) Score=5 Pos=-161 [Photobacterium profundum SS9]
TTACGTTTAGCCATCT
>PBPRA2940(metN) Score=5.7 Pos=-153 [Photobacterium profundum SS9]
AGCCATCTAGCCGTAA
>PBPRA2940(metN) Score=5.5 Pos=-121 [Photobacterium profundum SS9]
AGCCATCCAGACACCC
>PBPRA1378(metR) Score=6.2 Pos=-232 [Photobacterium profundum SS9]
AGCGGTATGGATGGCT
>PBPRA1378(metR) Score=8 Pos=-82 [Photobacterium profundum SS9]
AGACGTCTAGATGTTT
>PBPRA0369(metA) Score=7.9 Pos=-45 [Photobacterium profundum SS9]
AGATATCTAGACGTCT
>PBPRA0369(metA) Score=7.1 Pos=-37 [Photobacterium profundum SS9]
AGACGTCTAAACATCT
>PBPRA3134(metK) Score=6.6 Pos=-126 [Photobacterium profundum SS9]
AGCCGTCTAGACGGAG
# TF - MetR: PBPRA1378
>PBPRA0795(glyA) Score=5.5 Pos=-212 [Photobacterium profundum SS9]
ATGAAAATAATTCAT
>PBPRA0795(glyA) Score=4.1 Pos=-178 [Photobacterium profundum SS9]
ATGAATAAATTGTAA
>PBPRA0263(metF) Score=4.2 Pos=-160 [Photobacterium profundum SS9]
TTGAAGTTTATGCAA
>PBPRA0263(metF) Score=4.8 Pos=-138 [Photobacterium profundum SS9]
GTGAAAAAAATTCAT
>PBPRA1378(metR) Score=4.3 Pos=-163 [Photobacterium profundum SS9]
ATGAATAAAACTAAT
>PBPRA1378(metR) Score=4.8 Pos=-43 [Photobacterium profundum SS9]
ATTAAATATATTCAT
>PBPRA1379(metE) Score=4.8 Pos=-226 [Photobacterium profundum SS9]
ATGAATATATTTAAT
>PBPRA1379(metE) Score=4.3 Pos=-106 [Photobacterium profundum SS9]
ATTAGTTTTATTCAT
# TF - TyrR: PBPRA2434
>PBPRA2465(tyrP) Score=6 Pos=-224 [Photobacterium profundum SS9]
ATGTAAATATAAGTTTACAT
>PBPRB1165(hmgA) Score=5.7 Pos=-321 [Photobacterium profundum SS9]
GTGTAACATAAATTTTACAT
>PBPRB1165(hmgA) Score=4.3 Pos=-164 [Photobacterium profundum SS9]
ATGTAAAATATTCAACACAC
>PBPRA2465(tyrP) Score=4.5 Pos=-37 [Photobacterium profundum SS9]
GTGTAAAGTTTTATGAACAT
>PBPRA0794(COG1284) Score=5.7 Pos=-106 [Photobacterium profundum SS9]
ATGTAAAAAAATCATTACAG
>PBPRB1164(phhA) Score=5.7 Pos=-243 [Photobacterium profundum SS9]
ATGTAAAATTTATGTTACAC
>PBPRA2512(COG0733) Score=5.4 Pos=-74 [Photobacterium profundum SS9]
CTGTACATAATAGTTTACAG
>PBPRA3026(aroF) Score=5.2 Pos=-171 [Photobacterium profundum SS9]
GTGTAAACTTAAGTTTACGA
# TF - VSAK1_09283: PBPRA0298
>PBPRA0299(PF01810) Score=8.1 Pos=-58 [Photobacterium profundum SS9]
AATTGTGTCGATACAATT
>PBPRA0299(PF01810) Score=7.7 Pos=-153 [Photobacterium profundum SS9]
GATTGTCATGTGACAATA
>PBPRA0298(VSAK1_09283) Score=8.1 Pos=-104 [Photobacterium profundum SS9]
AATTGTATCGACACAATT
>PBPRA0298(VSAK1_09283) Score=7.7 Pos=-10 [Photobacterium profundum SS9]
TATTGTCACATGACAATC
# TF - YdcR: PBPRB1592
>PBPRA3588(COG0348) Score=5.5 Pos=-145 [Photobacterium profundum SS9]
CCTTGTTAGAGTAAT---------GACTGTTATATAATC
# TF - VEA_000881: PBPRA2308
>PBPRA2307(PF00892) Score=15 Pos=-94 [Photobacterium profundum SS9]
ATCTGTACCCA-(13)-AACTATCCCTT-(8)-TACTGTACCCA
# TF - PBPRB0322: PBPRB0322
>PBPRB0323(PF01810) Score=7.6 Pos=-91 [Photobacterium profundum SS9]
AATTGTTAT---------TGAACAATA
>PBPRB0323(PF01810) Score=7.8 Pos=-167 [Photobacterium profundum SS9]
CATTGTCAC---------GGTACATTT
>PBPRB0322(PBPRB0322) Score=7.6 Pos=-94 [Photobacterium profundum SS9]
TATTGTTCA---------ATAACAATT
>PBPRB0322(PBPRB0322) Score=7.8 Pos=-19 [Photobacterium profundum SS9]
AAATGTACC---------GTGACAATG
# TF - SdaR: PBPRA3188
>PBPRA3189(grtP) Score=6.7 Pos=-171 [Photobacterium profundum SS9]
GATTGTGCAAATGCACAATT
# TF - TtrR: PBPRB0008
>PBPRB0006(ttrC) Score=6 Pos=-106 [Photobacterium profundum SS9]
GGGTATGTGGAAAACCACAATAGG
>PBPRB0007(ttrS) Score=6 Pos=-175 [Photobacterium profundum SS9]
CCTATTGTGGTTTTCCACATACCC