# TF - TrpR: VF_0559
>VF_0660(COG0733) Score=5.4 Pos=-25 [Vibrio fischeri ES114]
TGTACTAGTTGAGTGATACA
>VF_2602(trpE) Score=6.3 Pos=-347 [Vibrio fischeri ES114]
CGCACTAGTTTACTAGTACA
# TF - FabR: VF_2438
>VF_1813(fadL) Score=4.8 Pos=-237 [Vibrio fischeri ES114]
AGCGTACACATATACCCT
>VF_1813(fadL) Score=4.7 Pos=-205 [Vibrio fischeri ES114]
GACCTACACCTGTACGCC
>VF_A0274(OLE1) Score=5.9 Pos=-35 [Vibrio fischeri ES114]
AGCGCACAACTGTACGCT
>VF_2264(lcfH) Score=5.5 Pos=-33 [Vibrio fischeri ES114]
AGCTTACACCTGTAAGCC
>VF_2548(hyIII) Score=6.2 Pos=-66 [Vibrio fischeri ES114]
AGCTTACAACTGTACGCT
>VF_1292(fabA) Score=5.4 Pos=-53 [Vibrio fischeri ES114]
TGAGTACAAGTGTTAGCT
>VF_A0699(COG2030) Score=6.1 Pos=-115 [Vibrio fischeri ES114]
AGCGAACAGGTGTAAGCT
# TF - NsrR: VF_2315
>VF_A0439(nnrS) Score=5.7 Pos=-75 [Vibrio fischeri ES114]
CATGCATAAAAAATACATG
>VF_2316(hmp) Score=5 Pos=-60 [Vibrio fischeri ES114]
GATATATTTTAGATACAAC
>VF_2316(hmp) Score=5.2 Pos=-35 [Vibrio fischeri ES114]
CATACATTATAAATACACC
>VF_2315(nsrR) Score=5.2 Pos=-90 [Vibrio fischeri ES114]
GGTGTATTTATAATGTATG
>VF_2315(nsrR) Score=5 Pos=-65 [Vibrio fischeri ES114]
GTTGTATCTAAAATATATC
>VF_0578(aox) Score=5.3 Pos=-41 [Vibrio fischeri ES114]
GGTGTATTTTAAATGCAAC
# TF - HexR: VF_0891
>VF_0913(gapA) Score=5.1 Pos=-62 [Vibrio fischeri ES114]
TGTAATTTTACTACC
>VF_2308(ppc) Score=4.7 Pos=-177 [Vibrio fischeri ES114]
TGAAATAAATTTACA
>VF_2308(ppc) Score=5.1 Pos=-31 [Vibrio fischeri ES114]
TGTAACAAAATTACA
>VF_0776(nirB) Score=5 Pos=-184 [Vibrio fischeri ES114]
TGTAAAAAAACTACA
>VF_0202(gpmM) Score=5.4 Pos=-63 [Vibrio fischeri ES114]
TGTAGTAAAATTACA
>VF_0967(ygaW) Score=5 Pos=-164 [Vibrio fischeri ES114]
TGTAAATTTACTACA
>VF_0967(ygaW) Score=5.3 Pos=-226 [Vibrio fischeri ES114]
TGTAATTTTATTACC
>VF_0736(pepD) Score=5.4 Pos=-200 [Vibrio fischeri ES114]
TGTAATTTTATTACG
>VF_0736(pepD) Score=4.6 Pos=-275 [Vibrio fischeri ES114]
AGAAATTAAATTACA
>VF_1973(aceB) Score=5.5 Pos=-295 [Vibrio fischeri ES114]
TGTAATTTAATTACG
>VF_A0586(pntA) Score=4.9 Pos=-87 [Vibrio fischeri ES114]
TGTCATTTTATTACA
>VF_A0806(glgC) Score=4.1 Pos=-84 [Vibrio fischeri ES114]
TGTAAATAATTTATG
>VF_2115(grcA) Score=4.7 Pos=-238 [Vibrio fischeri ES114]
TGTAGTAAATTTACC
>VF_2115(grcA) Score=4.4 Pos=-107 [Vibrio fischeri ES114]
TGTAGTTTTTTGACA
>VF_0206(tpiA) Score=4.2 Pos=-52 [Vibrio fischeri ES114]
TGTTATATTTTTACG
>VF_1894(ptsH) Score=5.2 Pos=-206 [Vibrio fischeri ES114]
TGTAAAATAATTACA
>VF_0891(hexR) Score=4.6 Pos=-148 [Vibrio fischeri ES114]
TGTTATTAAAATACA
>VF_2124(gltB) Score=4.3 Pos=-299 [Vibrio fischeri ES114]
TGTAGGATAGTTACA
# TF - ArgR: VF_0275
>VF_2306(argC) Score=4.5 Pos=-143 [Vibrio fischeri ES114]
AGTGAATAAAAATACAAT
>VF_2306(argC) Score=4.3 Pos=-164 [Vibrio fischeri ES114]
AACACATATTAAATCACA
>VF_2307(argE) Score=4 Pos=-62 [Vibrio fischeri ES114]
TGTGATTTAATATGTGTT
>VF_2307(argE) Score=4.5 Pos=-83 [Vibrio fischeri ES114]
ATTGTATTTTTATTCACT
>VF_2303(argH) Score=3.7 Pos=-114 [Vibrio fischeri ES114]
AATGAATTTTTTCTTTAT
>VF_2303(argH) Score=4.6 Pos=-135 [Vibrio fischeri ES114]
TTTGAATAAATATGTAAA
>VF_0585(argA) Score=3.8 Pos=-32 [Vibrio fischeri ES114]
AGTGAATAAGTATTTATC
>VF_0585(argA) Score=4.2 Pos=-53 [Vibrio fischeri ES114]
TTAAAATAAATAGTCACA
>VF_0407(argF) Score=4.7 Pos=-58 [Vibrio fischeri ES114]
AATGAATTTTTATGTATA
>VF_0407(argF) Score=4.3 Pos=-79 [Vibrio fischeri ES114]
TCAAAATAAATATTCACA
>VF_0407(argF) Score=3.5 Pos=-85 [Vibrio fischeri ES114]
AATAAATCAAAATAAATA
>VF_0407(argF) Score=3.6 Pos=-104 [Vibrio fischeri ES114]
AAAAAACATATACACATT
# TF - BirA: VF_2425
>VF_A1189(bioB) Score=8.6 Pos=-117 [Vibrio fischeri ES114]
TTGTAAACT---------------GGTTGACAG
>VF_A0748(bioA) Score=8.6 Pos=-44 [Vibrio fischeri ES114]
CTGTCAACC---------------AGTTTACAA
# TF - NrdR: VF_0699
>VF_1202(nrdA) Score=3.5 Pos=-144 [Vibrio fischeri ES114]
AATCACTATCTTGTAG
>VF_A0281(nrdD) Score=5 Pos=-58 [Vibrio fischeri ES114]
ACCCCACATCTTGTGT
>VF_A0281(nrdD) Score=4.9 Pos=-27 [Vibrio fischeri ES114]
CCCCACTATTTAGTAT
>VF_1202(nrdA) Score=5.1 Pos=-113 [Vibrio fischeri ES114]
GCCCTATATCTTGTGT
# TF - Zur: VF_0306
>VF_0328(zbp) Score=6.4 Pos=-389 [Vibrio fischeri ES114]
AAAATGTTATATTATTACATTTA
>VF_2367(znuC) Score=6.7 Pos=-90 [Vibrio fischeri ES114]
GTTATGTTATAACATAACAATTA
>VF_0829(znuC) Score=6.6 Pos=-50 [Vibrio fischeri ES114]
AAAATGTTACATTATAACACTTA
>VF_2366(znuA) Score=6.7 Pos=-79 [Vibrio fischeri ES114]
GTTATGTTATAACATAACAATTA
>VF_0830(znuA) Score=6.5 Pos=-61 [Vibrio fischeri ES114]
TAAGTGTTATAATGTAACATTTT
>VF_0328(zbp) Score=6.4 Pos=-389 [Vibrio fischeri ES114]
AAAATGTTATATTATTACATTTA
# TF - PdhR: VF_2182
>VF_2182(pdhR) Score=6.2 Pos=-215 [Vibrio fischeri ES114]
ATTGGTCTTACCAAT
>VF_2182(pdhR) Score=6.1 Pos=-80 [Vibrio fischeri ES114]
ATTGGTAATACCAAT
# TF - FadR: VF_1633
>VF_1812(fadL) Score=3.2 Pos=-128 [Vibrio fischeri ES114]
CAGTGGTCGGATTTGTC
>VF_0025(fadB) Score=5.6 Pos=-68 [Vibrio fischeri ES114]
AACTGGTCAAACCAGAT
>VF_2443(plsB) Score=4.6 Pos=-95 [Vibrio fischeri ES114]
AAAAGGTTTGACCAGTT
>VF_1932(fadE2) Score=5.9 Pos=-97 [Vibrio fischeri ES114]
AACTGGTTAGACCTCTT
>VF_0811(VC2105) Score=4.7 Pos=-32 [Vibrio fischeri ES114]
ATGAGGTCTGACCAGAA
>VF_1642(fadH) Score=5.4 Pos=-39 [Vibrio fischeri ES114]
TTCTGGTCAGACCACAA
>VF_1811(fadI) Score=4.3 Pos=-39 [Vibrio fischeri ES114]
TTGAGGTCTGACCACCT
# TF - NorR: VF_1783
>VF_1783(norR1) Score=5.4 Pos=-38 [Vibrio fischeri ES114]
AATTGTCAAATTAACACTG
>VF_1783(norR1) Score=5.6 Pos=-83 [Vibrio fischeri ES114]
AAGTGTCATTATGACAATC
>VF_1783(norR1) Score=5.4 Pos=-58 [Vibrio fischeri ES114]
TTTTGTCAAAACGACACTA
>VF_1782(norV) Score=5.6 Pos=-123 [Vibrio fischeri ES114]
GATTGTCATAATGACACTT
>VF_1782(norV) Score=5.4 Pos=-148 [Vibrio fischeri ES114]
TAGTGTCGTTTTGACAAAA
>VF_1782(norV) Score=5.4 Pos=-168 [Vibrio fischeri ES114]
CAGTGTTAATTTGACAATT
# TF - HutC: VF_A0454
>VF_A0453(hutI) Score=5.7 Pos=-59 [Vibrio fischeri ES114]
TTATTTGTATATACATATAG
>VF_A0454(hutC) Score=4.9 Pos=-33 [Vibrio fischeri ES114]
TTATTTGTATAGTCAATTTA
# TF - IscR: VF_0616
>VF_2461(nfuA) Score=4.9 Pos=-30 [Vibrio fischeri ES114]
TAATCATACTAAATTAGTCAGGTAT
>VF_0616(iscR) Score=7.4 Pos=-69 [Vibrio fischeri ES114]
ATACTTGACCAAAATAGTCAGGTAT
>VF_0616(iscR) Score=6.3 Pos=-94 [Vibrio fischeri ES114]
GTACTTGACTAAAATAGTAGGATAA
>VF_2134(erpA) Score=7 Pos=-75 [Vibrio fischeri ES114]
ATACTTGAATGAAACAGTCAGGTAT
# TF - NagC: VF_0806
>VF_A1010(hex) Score=5 Pos=-123 [Vibrio fischeri ES114]
AATAATTTATACCGCAAAATATA
>VF_A0438(nagE2) Score=4.8 Pos=-159 [Vibrio fischeri ES114]
GTTAATTTACGCCTCGAATTAAT
>VF_2138(chiS) Score=5 Pos=-131 [Vibrio fischeri ES114]
CTTGATTTTTAACATGAATTAAG
>VF_0818(gltA) Score=5.2 Pos=-132 [Vibrio fischeri ES114]
CTTTTTTTTCATTAAAAATATAA
>VF_0896(tfoX1) Score=4.6 Pos=-136 [Vibrio fischeri ES114]
CTTGTTTCGTTACATGAATTAAT
>VF_2510 Score=4.7 Pos=-128 [Vibrio fischeri ES114]
TATATTTTTCAATAAAATAAATT
>VF_1795(ompC) Score=4.8 Pos=-283 [Vibrio fischeri ES114]
GTTATTTTGTGATGTAAACCAAG
>VF_1795(ompC) Score=4.8 Pos=-143 [Vibrio fischeri ES114]
TTAATTTTGTGAAGCGAATTAAT
>VF_0807(nagA) Score=4.7 Pos=-40 [Vibrio fischeri ES114]
TTTTTTTCGTACTCTAAATTATA
>VF_A1010(hex) Score=4 Pos=-33 [Vibrio fischeri ES114]
TGTAATTCCAGATTCGAAATTAA
>VF_0808(nagE2) Score=4.5 Pos=-128 [Vibrio fischeri ES114]
TTTAATTTGCGGGGCGAAATTAA
>VF_2357(nagB) Score=5.4 Pos=-65 [Vibrio fischeri ES114]
CTTATTTTATAATGCGAATTAAT
>VF_1894(ptsH) Score=5.5 Pos=-218 [Vibrio fischeri ES114]
TTTATTTTTAGGTGTAAAATAAT
>VF_2076(pyrG) Score=4.6 Pos=-136 [Vibrio fischeri ES114]
ATTGATTTGGAGCAAAAAATAAA
>VF_1732(ptsG) Score=5 Pos=-318 [Vibrio fischeri ES114]
CTATTTTTGTTGCTAAAAATAAC
>VF_0442(pgk) Score=4.3 Pos=-154 [Vibrio fischeri ES114]
GTAAATTTGTGATGAAAAGATAA
>VF_0442(pgk) Score=4.5 Pos=-126 [Vibrio fischeri ES114]
ATGAATTTTTATCTTGAAAAAAG
>VF_1598(chiA) Score=4.6 Pos=-233 [Vibrio fischeri ES114]
CTAAATTCAAAGCACAAATAAAC
>VF_1598(chiA) Score=4.6 Pos=-208 [Vibrio fischeri ES114]
CTATTTTTATAAAGCAATAAAAA
>VF_1889(chiP) Score=5.2 Pos=-237 [Vibrio fischeri ES114]
TATTTTTTTTATTGGAAATTAAG
>VF_1390(chi) Score=4.4 Pos=-39 [Vibrio fischeri ES114]
CTTAATTTCGTTTTTAAATTATC
>VF_1573(tfoX) Score=5 Pos=-104 [Vibrio fischeri ES114]
GTTAATTTTTACGTTAAAATAAC
>VF_A0143(cbp) Score=4.9 Pos=-210 [Vibrio fischeri ES114]
TTTATTTCTTTATTTACAATAAG
>VF_2161(mcp) Score=4.3 Pos=-273 [Vibrio fischeri ES114]
TTTTATTTAAGATTTAATTCAAA
# TF - SiaR: VF_0664
>VF_0665(nagA2) Score=4.9 Pos=-51 [Vibrio fischeri ES114]
TTCGGAGTGTAACTCCAAT
>VF_0663(nanA) Score=5.4 Pos=-42 [Vibrio fischeri ES114]
AATGAAGAATAACTTCATT
>VF_0663(nanA) Score=5 Pos=-91 [Vibrio fischeri ES114]
AATGAAACTTTACTCCATA
>VF_0664(siaR) Score=5.3 Pos=-80 [Vibrio fischeri ES114]
TATGGAGTTACACTTCACA
>VF_0666(nanE) Score=5.1 Pos=-43 [Vibrio fischeri ES114]
ATTGAAGTATTACTCCGTT
>VF_0666(nanE) Score=4.9 Pos=-195 [Vibrio fischeri ES114]
ATTGGAGTTACACTCCGAA
>VF_A0786(ptsG2) Score=5.6 Pos=-88 [Vibrio fischeri ES114]
TTTGGAGTATAACTTCATA
>VF_A0786(ptsG2) Score=4.9 Pos=-116 [Vibrio fischeri ES114]
CTTGAAGTTAAACTCCGTA
# TF - NtrC: VF_0095
>VF_2153(glnK) Score=5.6 Pos=-136 [Vibrio fischeri ES114]
TGCACTATATTAGTGCG
>VF_0096(ntrB) Score=5.8 Pos=-37 [Vibrio fischeri ES114]
TGCACCATGATGGTGCA
>VF_0098(glnA) Score=5.6 Pos=-177 [Vibrio fischeri ES114]
TGCACCAAGATAGTGCA
# TF - Fur: VF_0810
>VF_1234(hutA) Score=4.4 Pos=-69 [Vibrio fischeri ES114]
TAGTAATTATCATTCGTAATA
>VF_A0158(fhuC) Score=5.6 Pos=-31 [Vibrio fischeri ES114]
GAATAAAAATAATTATCATTA
>VF_2151(fbpA) Score=5.9 Pos=-53 [Vibrio fischeri ES114]
TATTGATAATTATTATTATTA
>VF_1234(hutA) Score=4.4 Pos=-81 [Vibrio fischeri ES114]
AAATGAAAATGATAGTAATTA
>VF_1226(hutW) Score=5.7 Pos=-100 [Vibrio fischeri ES114]
TAATGAGATCAATTATCAATT
>VF_0833(feoA) Score=5.7 Pos=-35 [Vibrio fischeri ES114]
AAATAATAATGATTCTCACTA
>VF_1056(VCA1041) Score=5.8 Pos=-59 [Vibrio fischeri ES114]
AATTGATAATGTTTATCATTT
>VF_1234(hutA) Score=5.6 Pos=-75 [Vibrio fischeri ES114]
AAATGATAGTAATTATCATTC
>VF_A0848(PF11449) Score=5.3 Pos=-39 [Vibrio fischeri ES114]
TACTAATAATCATTCGCATTT
>VF_A0848(PF11449) Score=5.8 Pos=-65 [Vibrio fischeri ES114]
AGTTGATAATAATTCTCATTT
>VF_A0848(PF11449) Score=4.6 Pos=-72 [Vibrio fischeri ES114]
AAATGATAGTTGATAATAATT
>VF_0927(PF10952) Score=5.8 Pos=-70 [Vibrio fischeri ES114]
AATTGATAATAATTCTCAGTT
>VF_2441(COG3315) Score=5.9 Pos=-47 [Vibrio fischeri ES114]
TAATGATAGTTATTATCATTT
>VF_2441(COG3315) Score=4.4 Pos=-53 [Vibrio fischeri ES114]
AAGTGGTAATGATAGTTATTA
>VF_2334(frdA) Score=5.3 Pos=-298 [Vibrio fischeri ES114]
CAATAAGAATCATTATCACTT
>VF_A0158(fhuC) Score=5 Pos=-25 [Vibrio fischeri ES114]
AAATAATTATCATTAACATTT
>VF_A0157(PF07690) Score=5.6 Pos=-76 [Vibrio fischeri ES114]
TAATGATAATTATTTTTATTC
>VF_A0157(PF07690) Score=5 Pos=-82 [Vibrio fischeri ES114]
AAATGTTAATGATAATTATTT
>VF_2151(fbpA) Score=4.9 Pos=-47 [Vibrio fischeri ES114]
TAATTATTATTATTACCATTT
>VF_1190(irpA) Score=5.4 Pos=-132 [Vibrio fischeri ES114]
AAATGATAAGGATTTGCATTT
>VF_1190(irpA) Score=5.9 Pos=-87 [Vibrio fischeri ES114]
AAATAAAAATTATTATCATTA
>VF_A0191(fhuE) Score=5.9 Pos=-83 [Vibrio fischeri ES114]
AAATGGTAACAATTATCATTT
>VF_1225(tonB-hmu) Score=5.7 Pos=-65 [Vibrio fischeri ES114]
AATTGATAATTGATCTCATTA
>VF_1553(nrfB) Score=5.6 Pos=-264 [Vibrio fischeri ES114]
TATTAAGAATGATTCTTATTT
>VF_A0827(vctP) Score=5.6 Pos=-65 [Vibrio fischeri ES114]
TAATAATAACCATTTTCATTA
>VF_A0827(vctP) Score=5.4 Pos=-34 [Vibrio fischeri ES114]
AAATACGAATAGTTATCACTT
>VF_A0333(ptrB) Score=4.4 Pos=-85 [Vibrio fischeri ES114]
AAATGAAAATGATAATTGATC
>VF_A0333(ptrB) Score=5.5 Pos=-79 [Vibrio fischeri ES114]
AAATGATAATTGATCTCATTC
>VF_A0827(vctP) Score=5.6 Pos=-65 [Vibrio fischeri ES114]
TAATAATAACCATTTTCATTA
>VF_A0827(vctP) Score=5.4 Pos=-34 [Vibrio fischeri ES114]
AAATACGAATAGTTATCACTT
>VF_A0756(COG3016) Score=5.5 Pos=-82 [Vibrio fischeri ES114]
TACTGAGAATGATTCTTATTT
>VF_A0756(COG3016) Score=4.7 Pos=-66 [Vibrio fischeri ES114]
TATTTATATTGATAATCATTT
>VF_A0756(COG3016) Score=5.5 Pos=-60 [Vibrio fischeri ES114]
TATTGATAATCATTTCCATTT
>VF_A0200(VV21178) Score=5 Pos=-44 [Vibrio fischeri ES114]
TGATAATAATGATAATCATTA
>VF_A0200(VV21178) Score=5.3 Pos=-38 [Vibrio fischeri ES114]
TAATGATAATCATTATCTTTC
>VF_1277(VV1_2646) Score=4.4 Pos=-26 [Vibrio fischeri ES114]
AGATAATAATAGGAATCATTA
>VF_1277(VV1_2646) Score=5.2 Pos=-20 [Vibrio fischeri ES114]
TAATAGGAATCATTATCACTA
>VF_A0161(iucA) Score=5.5 Pos=-52 [Vibrio fischeri ES114]
TAATGAGAATCATTAGCATTC
>VF_A0165(iutA) Score=4.5 Pos=-62 [Vibrio fischeri ES114]
GAATACGGATTTTTATCATTT
>VF_A0784(fhuA) Score=4.7 Pos=-55 [Vibrio fischeri ES114]
GCAAGAGAATCATTCTCATTT
>VF_1554(nrfA) Score=5.6 Pos=-226 [Vibrio fischeri ES114]
AAATAAGAATCATTCTTAATA
# TF - FruR: VF_A0943
>VF_A0942(fruB) Score=5.6 Pos=-212 [Vibrio fischeri ES114]
GCTGAATCGATTCAGT
>VF_A0942(fruB) Score=5.2 Pos=-190 [Vibrio fischeri ES114]
GCTGAAAGGATTCAGC
>VF_A0942(fruB) Score=5.6 Pos=-81 [Vibrio fischeri ES114]
GCTGAATCGATTCAGT
>VF_A0943(fruR) Score=5.2 Pos=-220 [Vibrio fischeri ES114]
ACTGAATCGATTCAGC
>VF_A0943(fruR) Score=5.1 Pos=-111 [Vibrio fischeri ES114]
GCTGAATCCTTTCAGC
>VF_A0943(fruR) Score=5.2 Pos=-89 [Vibrio fischeri ES114]
ACTGAATCGATTCAGC
# TF - PurR: VF_1572
>VF_0911(gsk) Score=5.5 Pos=-105 [Vibrio fischeri ES114]
GAGCAAACGTTTGCTA
>VF_0116(xanP) Score=5.6 Pos=-188 [Vibrio fischeri ES114]
AAGCAAACGATTGCTT
>VF_0778(ushA) Score=5.6 Pos=-220 [Vibrio fischeri ES114]
ACGTAAACGGTTGCGT
>VF_0695(glyA) Score=6 Pos=-64 [Vibrio fischeri ES114]
ACGTAAACGTTTGCGT
>VF_1927(upp) Score=5.7 Pos=-143 [Vibrio fischeri ES114]
AGGGAAACGTTTGCGT
>VF_1770(folD) Score=5.9 Pos=-86 [Vibrio fischeri ES114]
ACGCAAACGTTTGCTC
>VF_2537(purE) Score=5.7 Pos=-86 [Vibrio fischeri ES114]
ACGCAAACGTTTTCCT
>VF_1498(purC) Score=5.4 Pos=-90 [Vibrio fischeri ES114]
TAGCAATCGTTTGCTT
>VF_2394(purH) Score=4.4 Pos=-206 [Vibrio fischeri ES114]
ATGCAATCGATTGCGC
>VF_1928(purM) Score=5.6 Pos=-80 [Vibrio fischeri ES114]
ACGCAAACGTTTCCCT
>VF_1487(purT) Score=5.8 Pos=-72 [Vibrio fischeri ES114]
TAGCAAACGTTTGCGT
>VF_0652(purL) Score=5.9 Pos=-182 [Vibrio fischeri ES114]
ACGCAAACGGTTGCTT
>VF_1692(cvpA) Score=6 Pos=-63 [Vibrio fischeri ES114]
AAGAAAACGTTTGCGT
>VF_1285(pyrD) Score=5.1 Pos=-245 [Vibrio fischeri ES114]
AGCCAAACGTTTGCTC
>VF_1793(fhs) Score=5 Pos=45 [Vibrio fischeri ES114]
ATGAAAACGATTGCGT
# TF - RbsR: VF_1449
>VF_1444(rbsD) Score=6.4 Pos=-71 [Vibrio fischeri ES114]
TTACGCAAACGTTTCGATGA
# TF - AgaR: VF_A1006
>VF_A0989(agaY) Score=6.5 Pos=-180 [Vibrio fischeri ES114]
AAAACA---------------CGAAAG
>VF_A1006(agaR2) Score=6.4 Pos=-60 [Vibrio fischeri ES114]
GTAAGG---------------CGAAAG
# TF - LexA: VF_2442
>VF_0455(mutH) Score=4.9 Pos=-140 [Vibrio fischeri ES114]
CACTGTATATGGATCCAGAA
>VF_1493(VC1191) Score=5.4 Pos=-43 [Vibrio fischeri ES114]
TACTGTATAAATACACACTG
>VF_0448(xerD) Score=5 Pos=-51 [Vibrio fischeri ES114]
TACTGTAATTCTAACCAGTG
>VF_1269(umuD) Score=5.2 Pos=-27 [Vibrio fischeri ES114]
CGCTGTACTTATATACAGTG
>VF_0734(dinB) Score=5.6 Pos=-27 [Vibrio fischeri ES114]
AACTGTGTTTTTATACAGTT
>VF_0044(rmuC) Score=5.7 Pos=-62 [Vibrio fischeri ES114]
AACTGGACATTTATCCAGTA
>VF_2442(lexA) Score=5.7 Pos=-25 [Vibrio fischeri ES114]
AACTGTATAAACAGACAGGT
>VF_2442(lexA) Score=5.1 Pos=-45 [Vibrio fischeri ES114]
AGCTGTATATACTCACAGTG
>VF_0951(ruvA) Score=5.8 Pos=-66 [Vibrio fischeri ES114]
TACTGGATATCTATCCAGTT
>VF_0341(uvrA) Score=5.5 Pos=-90 [Vibrio fischeri ES114]
CACTGTTTTTTTATCCAGTA
>VF_0068(uvrD) Score=5.2 Pos=-27 [Vibrio fischeri ES114]
ACATGTATAAATAACCAGTG
>VF_0577(yebG) Score=5.5 Pos=-41 [Vibrio fischeri ES114]
TACTGTATAAAACACCAGTT
>VF_1641(topB) Score=5.3 Pos=-29 [Vibrio fischeri ES114]
AACTGTCTATTCATACAGGT
>VF_0535(recA) Score=5.7 Pos=-69 [Vibrio fischeri ES114]
CACTGTACAAATAGACAGTA
>VF_1998(recN) Score=5.3 Pos=-54 [Vibrio fischeri ES114]
TACTGTGTCTATATACAGTG
>VF_1998(recN) Score=6 Pos=-76 [Vibrio fischeri ES114]
TACTGTATAAAGAAACAGTA
# TF - EbgR: VF_A0348
>VF_A0338(SSF48208) Score=5.5 Pos=-45 [Vibrio fischeri ES114]
GTTAAATTTAGTAAAACTTTA
>VF_A0340(ygjI) Score=5.3 Pos=-71 [Vibrio fischeri ES114]
CTATAATTTACTAAAAGTTAC
>VF_A0340(ygjI) Score=4.9 Pos=-81 [Vibrio fischeri ES114]
AAATTAATTACTATAATTTAC
>VF_A0340(ygjI) Score=5.9 Pos=-94 [Vibrio fischeri ES114]
GTAACTTTTAGTAAAATTAAT
>VF_A0347(ebgA) Score=4.3 Pos=-67 [Vibrio fischeri ES114]
GAGTTATTTACTACGATTTAT
>VF_A0347(ebgA) Score=4.5 Pos=-96 [Vibrio fischeri ES114]
TAAAACTTTAGTTAATATCTT
>VF_A0347(ebgA) Score=5.7 Pos=-107 [Vibrio fischeri ES114]
ATTTGTTTTACTAAAACTTTA
>VF_A0348(ebgR) Score=4.9 Pos=-92 [Vibrio fischeri ES114]
TAAAACTTTAGTAAAAGCCAT
# TF - PhnR: VF_1530
>VF_A1087(phnS2) Score=4.7 Pos=-31 [Vibrio fischeri ES114]
TTATTGATGTAGTCCAAAAG
# TF - NorR2: VF_A0862
>VF_A0863(hcp) Score=5.9 Pos=-225 [Vibrio fischeri ES114]
TGATGTATTTATAACATCA
>VF_A0862(norR2) Score=6 Pos=-39 [Vibrio fischeri ES114]
TGATGTAAATTTTACATCA
>VF_A0863(hcp) Score=5.2 Pos=-201 [Vibrio fischeri ES114]
CGTAGTCATTAATACATCA
# RNA - MOCO_RNA_motif
>VF_0940(moaA) Score=103.1 Pos=-136 [Vibrio fischeri ES114]
GGCTGCCATAACTCCGAGCTCAAGCTACTAAGTTGTTTTTTAAGAAGCACTCAATATGTAGCGTGAGCCAGTGACAATTCGGTCACAAGGGTTTGTTTGGAAATGAACAAGCCTCCCGTGTTTGGAAAGGTGTTCCGTGGCGCAACAATT
# RNA - Trp_leader
>VF_2602(trpE) Score=23.1 Pos=-226 [Vibrio fischeri ES114]
TCACGATGGTGGCACTACTTTGGGTAGTGTTTTGTGCTAATTTATTTTTGACATAAATCCACTACCCGCAACTAAGCGGGTTTTTTTAT
# RNA - yybP-ykoY
>VF_A0964(COG2119) Score=60.3 Pos=-208 [Vibrio fischeri ES114]
CCTTACTCTTTGGGGAGTAGCCTGCTTTCTCGTTTTCATAAAAATACATAAAACAGAAAGCTCATATATCAACATAATTGATGCAAAATCATCATGGTATATGAGACAAGCCTGAGCAGCTTGTTTGGCAAGACCTTAGATTAACATCA
>VF_A0278(ykoY) Score=49.6 Pos=-216 [Vibrio fischeri ES114]
TATCCAGATCATTGGGGAGTAGTCACAAGATTTAATACTTAATCTTGTTCAGATATCGTCATCCCGAAGCTTTGGCTTCCGGTATCTGTAAGTGGGCAAAGGTTGCCAATCGCTTTGACAAGACCAAAACCATAACA
# RNA - L10_leader
>VF_2416(rplJ) Score=24.2 Pos=-288 [Vibrio fischeri ES114]
TTTAATTAGGAAGTCTCCGTCCAAGACCGTAGGCGCTCGAAAGAGCTTAATAAAACCTGCGTAGACGGTGCCCGAACTTGAAATCAATTTTGTAAAAATTGGTTTTTTGTGACTGCA
# RNA - Lysine
>VF_0338(lysC) Score=79.5 Pos=-241 [Vibrio fischeri ES114]
AATATAAAGAAGAGGAGCATTACCTAGGTAGCTTAATTTGTGGAGCCCAAACTCCTACACAAATAAGTGAGGGAGAGTAATGCCGAGATGATCCTATTGGGAGTAGGATTGTCGGTCGTTTAGGCTGAATCCTAACGATTGTCACTTAATTTATTAAGTGAAGAGCTTCTAGCAAA
>VF_1630(lysW) Score=130.1 Pos=-266 [Vibrio fischeri ES114]
CTAAAAGGGTAGAGGCGCACCGCCTAAGAGTAAATTGTAAGAGGGTGATACTTATGACGACAATTGAAAGGAGTCGGTGCCGAAGTTAATTACGTTAATCGAGCGTATTAGCTGGGGTTATTTCGAAGAGGAATAACACTGCCATAGTCAATTTTATTTTTTAACTATGGAGCGCTACTGTAGGG
# RNA - Leu_leader
>VF_0295(leuA) Score=36.8 Pos=-174 [Vibrio fischeri ES114]
ATGAAAACAGTATCTTCTTTTGCTCTAAACCTCCTCCTGATCGTGAACATCTCACGCGGGTAGGTTATGGACCAAAAGAAACCATAAACCAAATTTTAAAACCCGCTAACCATGGCGGGTTTTTTT
# RNA - TPP
>VF_A0316(thiD) Score=73 Pos=-199 [Vibrio fischeri ES114]
GCCATTAGTCGGGGAGCCAATAGGCTGAGATCGCAATAGCGAACCCGTTGAACCTGATTCAGTTAGTACTGACGTAGGGAACTAATGGTCCTTTTGACA
>VF_0267(thiB) Score=60.6 Pos=-165 [Vibrio fischeri ES114]
ACTTCTCATCGGGGAGCTTTGGCTGAGATTAATGAAGATTGGATAATGTTCATTTAAACCCGTATCACCTGAACCAGATAATGCTGGCGTAGGAATTGAGATGACATTCTCCTA
>VF_0032(thiC) Score=77.8 Pos=-301 [Vibrio fischeri ES114]
GAAACTTGTCGGAGTGCTTAGTGCTTTTTAAAGTACGAGCTGAGACCGCAGTGCGGGATCCGTAGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGACAATTTACATC
# RNA - GEMM_RNA_motif
>VF_1573(tfoX) Score=72.7 Pos=-210 [Vibrio fischeri ES114]
CACGAACATGGCAAACTACATGAAAATGTAGGACGCAAAGCTTCCGGCCTAAGTATTTATATAAGGTAGCGGGGTTGCCGACGG
# RNA - S15
>VF_0489(rpsO) Score=92.9 Pos=-62 [Vibrio fischeri ES114]
GTAGTGGCTGAATCAGAGATTGGCTACTACAAATATTAAACTACTCTTATCAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGAATACGCACAATCTGAAGG
# RNA - Glycine
>VF_1454(glyP) Score=62.7 Pos=-194 [Vibrio fischeri ES114]
TCTGGAGAGAGCCGTTAAATCGGCCGCCGAAGGAGCAAGCCCTTATCTGAAAAATGATAAAGGTGAAACTCTCAGGCAAAAGGACAGAGGA
>VF_1454(glyP) Score=32.7 Pos=-312 [Vibrio fischeri ES114]
TGAAGACTGCAGGAGAGTGGCAAAAACCGTCAAGGTTACGCCCGCCGAAGAAGTAAATCTTTCAGGTGCCGAGTTCATTTTTTAAGTGAATAAGGTGAGGACTGTAGTTGGAGGAA
# RNA - Thr_leader
>VF_2118(thrA) Score=55.2 Pos=-232 [Vibrio fischeri ES114]
ATTATCAGCTCTATGATTATTACCACAACAATTACCGGCACCATGGTTGCTGGGGTGGGCTGATACGTATAAGTATATGAAAAAGCCTGCTCTGATTACCAGAGCAGGCTTTTTTTTG
# RNA - Cobalamin
>VF_A0973(btuF) Score=31.5 Pos=-150 [Vibrio fischeri ES114]
GATAGAATATCTCAACATAGCATCGTACAATGAAGATTACTTCGGAATACGGTGAGAATCCGTAACGGGCGCGCCACTGTGAGAGCTTGCAAGAGTTTGAGTCAGATACGAAGTTGGTTCATATTATGTACG
>VF_2435(btuB) Score=91.9 Pos=-265 [Vibrio fischeri ES114]
CTACTATTTCGCCCATGTTGGTGCGCTATTTTTAATTATAGCCTGAATAGGGAATCTGGTGAAAATCCAGAACTGACGCGCAGCGGTAAGAGAGAACGAAGGTACAATTTTTCACACTGTTAATTTTAGATGTTTAAGGATATCGACGAATAATGGGAAGTGAGTACTCTAGGTTAACTGCTCTCAAGTCCGAAGACCTGCCAGCAATAAGTAATACATT
# RNA - His_leader
>VF_1012(hisG) Score=78.2 Pos=-244 [Vibrio fischeri ES114]
CATCACCACCATCATCCTGATTAGTCTTTCGGGAGGATACGTATTATCCGGAAGGCAATTTGAATTTCCTTCCGATGAATAAAAATTCTAACCCTCGGAAGGTCAAACTTCTGAGGGTTTTTTC
# TF - NarP: VF_1909
>VF_0940(moaA) Score=4.5 Pos=-256 [Vibrio fischeri ES114]
TACCACTTTATAGATA
>VF_1553(nrfB) Score=5.1 Pos=-294 [Vibrio fischeri ES114]
TACCTCTTAAGTGTTA
>VF_1553(nrfB) Score=4.3 Pos=-206 [Vibrio fischeri ES114]
TATCACAAAAGGAGTA
>VF_2334(frdA) Score=4.5 Pos=-194 [Vibrio fischeri ES114]
TGCCCCATTAGTGGTA
>VF_1308(fnr) Score=4.2 Pos=-62 [Vibrio fischeri ES114]
TACCACTTTAGTGCGA
>VF_0776(nirB) Score=4.7 Pos=-115 [Vibrio fischeri ES114]
TACCACCTTAGAGCTA
>VF_A0297(torE) Score=4.6 Pos=-257 [Vibrio fischeri ES114]
TTACTCTTTAGGGGTA
>VF_A0083(dmsD) Score=4.5 Pos=-265 [Vibrio fischeri ES114]
TACCTCTCAATGGGTA
>VF_A0082(dmsA) Score=4.7 Pos=-86 [Vibrio fischeri ES114]
TACCCATTGAGAGGTA
>VF_2478(pckA) Score=4.8 Pos=-125 [Vibrio fischeri ES114]
TACCACTTTATGGTTA
>VF_1554(nrfA) Score=4.7 Pos=-101 [Vibrio fischeri ES114]
TACCTCTTAATTAGTA
>VF_2353(aspA) Score=4.9 Pos=-140 [Vibrio fischeri ES114]
TACCACTAAAGAGGTG
>VF_1824(ccmA) Score=4.8 Pos=-192 [Vibrio fischeri ES114]
TACCTACAAAGTGGTA
>VF_1907(napF) Score=4.7 Pos=-87 [Vibrio fischeri ES114]
TAACCATTATGGGGTA
>VF_1908(narQ) Score=4.7 Pos=-116 [Vibrio fischeri ES114]
TACCCCATAATGGTTA
>VF_A0189(torY) Score=4.9 Pos=-66 [Vibrio fischeri ES114]
TAACCCCAAAGTGGTA
>VF_1554(nrfA) Score=4.3 Pos=-279 [Vibrio fischeri ES114]
TACTCCTTTTGTGATA
>VF_1554(nrfA) Score=5.2 Pos=-191 [Vibrio fischeri ES114]
TAACACTTAAGAGGTA
>VF_1590(pflB) Score=4.6 Pos=-269 [Vibrio fischeri ES114]
TAATACTTATGGGGTA
>VF_1590(pflB) Score=4 Pos=-24 [Vibrio fischeri ES114]
TTCTACTAAAAAGGTA
# TF - ZntR: VF_2393
>VF_1522(zntA) Score=6.9 Pos=-77 [Vibrio fischeri ES114]
ACCTTGGAGTTAACTCTAAGGT
# TF - CueR: VF_0782
>VF_0782(cueR) Score=5.5 Pos=-46 [Vibrio fischeri ES114]
ACCTTACAGTTAATGGAAGGT
>VF_0781(copA) Score=5.5 Pos=-60 [Vibrio fischeri ES114]
ACCTTCCATTAACTGTAAGGT
>VF_A0442(VCA0262) Score=5.5 Pos=-50 [Vibrio fischeri ES114]
ACCTTCCCCTAAGTGGAGGCT
# TF - GalR: VF_A0361
>VF_A0352(galE) Score=5.6 Pos=-247 [Vibrio fischeri ES114]
GATTGTAAACGTTTACAATT
>VF_A0352(galE) Score=6.4 Pos=-92 [Vibrio fischeri ES114]
TAGTGTAAACGTTTACATTT
>VF_A0361(galR) Score=5.7 Pos=-107 [Vibrio fischeri ES114]
TAATGATAACGTTTACAAAA
# TF - MalI: VF_1720
>VF_1720(malI) Score=6.1 Pos=-140 [Vibrio fischeri ES114]
ATGGTAAAACGTTTTACCAC
>VF_1720(malI) Score=6.2 Pos=-40 [Vibrio fischeri ES114]
TAGGTGAAACGTTTTATCAA
>VF_1719(malX) Score=6.2 Pos=-228 [Vibrio fischeri ES114]
TTGATAAAACGTTTCACCTA
>VF_1719(malX) Score=6.1 Pos=-128 [Vibrio fischeri ES114]
GTGGTAAAACGTTTTACCAT
# TF - VF_1255: VF_1255
>VF_1254(nhaX) Score=7.5 Pos=-116 [Vibrio fischeri ES114]
TTCATGTAAGCGCTTACATGAG
# TF - CelR2: VF_0608
>VF_0603(celF) Score=6.3 Pos=-85 [Vibrio fischeri ES114]
ATATGTAACCGGTTACTGAA
>VF_0603(celF) Score=6.2 Pos=-72 [Vibrio fischeri ES114]
TACTGAAACCGGTTACATTT
# TF - MetJ: VF_2268
>VF_A0768(csd) Score=5.7 Pos=-43 [Vibrio fischeri ES114]
GGGCATATGGACGTTT
>VF_0439(metK) Score=6.5 Pos=-68 [Vibrio fischeri ES114]
AAACGTATAGACTTAT
>VF_1566(mtsA) Score=6.6 Pos=-96 [Vibrio fischeri ES114]
AGCCGTCTAGATGTAA
>VF_2267(metB) Score=6.6 Pos=-256 [Vibrio fischeri ES114]
AGAAGTGTTGACGTCT
>VF_2267(metB) Score=8.1 Pos=-272 [Vibrio fischeri ES114]
AGACATATAGACGTCT
>VF_2267(metB) Score=7.4 Pos=-264 [Vibrio fischeri ES114]
AGACGTCTAGAAGTGT
>VF_1566(mtsA) Score=6.4 Pos=-104 [Vibrio fischeri ES114]
AAACATATAGCCGTCT
>VF_2309(metF) Score=7.7 Pos=-86 [Vibrio fischeri ES114]
AGACATATAGACGTCT
>VF_0439(metK) Score=6.6 Pos=-100 [Vibrio fischeri ES114]
AGACGTCTAGATGGAA
>VF_1721(metE) Score=7.1 Pos=-152 [Vibrio fischeri ES114]
AAACATCTAGACGGCT
>VF_1721(metE) Score=6.1 Pos=-31 [Vibrio fischeri ES114]
AGCCATCCAAACGGCT
>VF_2268(metJ) Score=6 Pos=-108 [Vibrio fischeri ES114]
AGACGTCAACACTTCT
>VF_2268(metJ) Score=6.9 Pos=-100 [Vibrio fischeri ES114]
ACACTTCTAGACGTCT
>VF_2268(metJ) Score=7.7 Pos=-92 [Vibrio fischeri ES114]
AGACGTCTATATGTCT
>VF_0337(metH) Score=7.8 Pos=-69 [Vibrio fischeri ES114]
AGACGTCTAGATTTCT
>VF_0686(metN) Score=7.1 Pos=-70 [Vibrio fischeri ES114]
AGACGTCTAGACGTAA
>VF_0686(metN) Score=6.1 Pos=-62 [Vibrio fischeri ES114]
AGACGTAAAAATATCT
>VF_1722(metR) Score=7.6 Pos=-84 [Vibrio fischeri ES114]
AGCCGTCTAGATGTTT
>VF_1722(metR) Score=6.6 Pos=-205 [Vibrio fischeri ES114]
AGCCGTTTGGATGGCT
>VF_2063(metA) Score=7.2 Pos=-40 [Vibrio fischeri ES114]
AGAAGTATAGACGTAT
# TF - MetR: VF_1722
>VF_A0142(pfl) Score=4.8 Pos=-173 [Vibrio fischeri ES114]
ATGCATATAATGCAT
>VF_A0142(pfl) Score=4.8 Pos=-151 [Vibrio fischeri ES114]
ATGAAAAGCATTCAT
>VF_0695(glyA) Score=4.1 Pos=-222 [Vibrio fischeri ES114]
ATGCAATTATTTGAA
>VF_0695(glyA) Score=5.5 Pos=-182 [Vibrio fischeri ES114]
ATGAATATATTTCAT
>VF_2309(metF) Score=4.5 Pos=-142 [Vibrio fischeri ES114]
TTGAGAAAAATTCAT
>VF_1722(metR) Score=5 Pos=-136 [Vibrio fischeri ES114]
ATGAATTATATTCAA
>VF_1722(metR) Score=4.1 Pos=-101 [Vibrio fischeri ES114]
ATCGATTAACTTCAT
>VF_1721(metE) Score=4.1 Pos=-134 [Vibrio fischeri ES114]
ATGAAGTTAATCGAT
>VF_1721(metE) Score=5 Pos=-99 [Vibrio fischeri ES114]
TTGAATATAATTCAT
# TF - TyrR: VF_A0751
>VF_A0751(tyrR) Score=5.6 Pos=-41 [Vibrio fischeri ES114]
GTGTAAACATATTTTGACAC
>VF_1197(tyrP) Score=6.1 Pos=-132 [Vibrio fischeri ES114]
GTGTAAACATATAATTACAG
>VF_1605(COG0733) Score=5.2 Pos=-78 [Vibrio fischeri ES114]
ATGTACAAAAATATGTACAC
>VF_0553(aroF) Score=5.8 Pos=-29 [Vibrio fischeri ES114]
ATGGAAATAAAAGTTTACAG
>VF_0553(aroF) Score=5.1 Pos=-139 [Vibrio fischeri ES114]
CTGTAAACTTAAATTTACGA
# TF - PhsR: VF_A0103
>VF_A0102(phsS) Score=7.5 Pos=-212 [Vibrio fischeri ES114]
ACTATTGTGGTAAACCACAATAAT
>VF_A0101(sirA) Score=7.5 Pos=-224 [Vibrio fischeri ES114]
ATTATTGTGGTTTACCACAATAGT
# TF - SdaR: VF_2155
>VF_2156(grtP) Score=6.6 Pos=-121 [Vibrio fischeri ES114]
ATTTGTGCAATTGCACAATG