# TF - FucR: b2805 >b2800(fucA) Score=7.3 Pos=-284 [Escherichia coli str. K-12 substr. MG1655] ATGACCGTATTAATTGTTTGTGCCGAAAACGGTCAT >b2800(fucA) Score=6.3 Pos=-225 [Escherichia coli str. K-12 substr. MG1655] ATGACCGTTTTGATAAATATTTTTAAGAGCGGTCAT >b2801(fucP) Score=6.3 Pos=-357 [Escherichia coli str. K-12 substr. MG1655] ATGACCGCTCTTAAAAATATTTATCAAAACGGTCAT >b2801(fucP) Score=7.3 Pos=-298 [Escherichia coli str. K-12 substr. MG1655] ATGACCGTTTTCGGCACAAACAATTAATACGGTCAT # TF - AlsR: b4089 >b4090(rpiB) Score=5.3 Pos=-111 [Escherichia coli str. K-12 substr. MG1655] ACTCTGTAAAACAGATC >b4089(alsR) Score=5.3 Pos=-264 [Escherichia coli str. K-12 substr. MG1655] GATCTGTTTTACAGAGT # TF - BetI: b0313 >b0314(betT) Score=6.7 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TTGATTGGACGTTCAATATA >b0313(betI) Score=6.6 Pos=-66 [Escherichia coli str. K-12 substr. MG1655] TATATTGAACGTCCAATCAA # TF - TyrR: b1323 >b1323(tyrR) Score=3.7 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] GTGTCAATGATTGTTGACAG >b2601(aroF) Score=5.4 Pos=-165 [Escherichia coli str. K-12 substr. MG1655] GTGTAAATTTATCTATACAG >b2601(aroF) Score=5.4 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] GTGTAAATAAAAATGTACGA >b2601(aroF) Score=4 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] ATGGATTGAAAACTTTACTT >b0048(folA) Score=4.5 Pos=-182 [Escherichia coli str. K-12 substr. MG1655] ACGTAAATCACACTTTACAG >b0929(ompF) Score=5 Pos=-75 [Escherichia coli str. K-12 substr. MG1655] CCGTAAATTTTTATTGACAG >b3161(mtr) Score=5.3 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] CTGTAAAATAATATATACAG >b1907(tyrP) Score=5.6 Pos=-110 [Escherichia coli str. K-12 substr. MG1655] TTGTACATTTATATTTACAC >b0112(aroP) Score=5 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] ATGTAAACAAATTAATACAA >b0388(aroL) Score=5.6 Pos=-182 [Escherichia coli str. K-12 substr. MG1655] ATGTAATTTATTATTTACAC >b0388(aroL) Score=5 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] GTGGAATTTTTTCTTTACAA # TF - Crp: b3357 >b3365(nirB) Score=3.4 Pos=-76 [Escherichia coli str. K-12 substr. MG1655] GAATTTGATTTACATCAATAAG >b3365(nirB) Score=3.2 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] AAAATTTATACAAATCAGCAAT >b3357(crp) Score=3.3 Pos=-136 [Escherichia coli str. K-12 substr. MG1655] GTATGCAAAGGACGTCACATTA >b3357(crp) Score=3.3 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] TACATTGATGTACTGCATGTAT >b2344(fadL) Score=4.8 Pos=-269 [Escherichia coli str. K-12 substr. MG1655] ATAAGTGACCGAAATCACACTT >b2344(fadL) Score=3.9 Pos=-247 [Escherichia coli str. K-12 substr. MG1655] AAAAATGATCTAAAACAAAATT >b2153(folE) Score=3.8 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TTATGTGCGCCGCCTCACGCAC >b3599(mtlA) Score=5.4 Pos=-162 [Escherichia coli str. K-12 substr. MG1655] TTATGTGATTGATATCACACAA >b0584(fepA) Score=3.2 Pos=-36 [Escherichia coli str. K-12 substr. MG1655] AGTTGCAATTCGTGGCAAAAAT >b3243(aaeR) Score=5.3 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] TTATGTGATCTAAATCACTTTT >b4069(acs) Score=4.1 Pos=-100 [Escherichia coli str. K-12 substr. MG1655] TTGCGTGATCTGTCGCCCAAAT >b3072(aer) Score=5 Pos=-104 [Escherichia coli str. K-12 substr. MG1655] AATTGCGATCTAAATCAAATTA >b1415(aldA) Score=4.3 Pos=-112 [Escherichia coli str. K-12 substr. MG1655] TTTTATGAAGCCCTTCACAGAA >b2957(ansB) Score=4 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] TTTTGTTACCTGCCTCTAACTT >b4055(aphA) Score=3.6 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] CATCCTGCTTTTCATCACAAAA >b4055(aphA) Score=4 Pos=-57 [Escherichia coli str. K-12 substr. MG1655] TTTTGCAACAAATCTCACAATA >b0063(araB) Score=3.9 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] TTATTTGCACGGCGTCACACTT >b0064(araC) Score=4.4 Pos=-229 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGACGCCGTGCAAATAA >b2841(araE) Score=4.4 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] AATTGGAATATCCATCACATAA >b1901(araF) Score=4.2 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] CGATGTGATATTGCTCTCCTAT >b3957(argE) Score=3.7 Pos=-66 [Escherichia coli str. K-12 substr. MG1655] TAGTGTATTTTTATTCATAAAT >b1704(aroH) Score=4.3 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] AGGTGTGACACACCTCGCACTT >b1704(aroH) Score=4 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] TATCGTGATGCGCATCACTTCC >b2715(ascF) Score=4.2 Pos=-177 [Escherichia coli str. K-12 substr. MG1655] TCAGGTGACCGGTTTCACAAAT >b4139(aspA) Score=4.5 Pos=-206 [Escherichia coli str. K-12 substr. MG1655] AGCGGTGATCTATTTCACAAAT >b4139(aspA) Score=4.2 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] TAAAGTGATCCAGATTACGGTA >b3739(atpI) Score=4.8 Pos=-263 [Escherichia coli str. K-12 substr. MG1655] ATATGTGATCTGAAGCACGCTT >b1963(b1963) Score=4.6 Pos=-287 [Escherichia coli str. K-12 substr. MG1655] TGGTGTGATCAGGCGCACATTA >b2462(b2462) Score=4.6 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] CTTAGTGATCTACCTCACCTTT >b3570(bax) Score=4.2 Pos=-189 [Escherichia coli str. K-12 substr. MG1655] TTTTGCGATAACCCCCACATTT >b3570(bax) Score=4.4 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] ATTTGAGATTCAACTCTCAAAT >b3723(arbG) Score=3.7 Pos=-202 [Escherichia coli str. K-12 substr. MG1655] AACTGCGAGCATGGTCATATTT >b3723(arbG) Score=3.6 Pos=-185 [Escherichia coli str. K-12 substr. MG1655] TATTTTTATCAATAGCGCATTG >b0040(caiT) Score=4.3 Pos=-278 [Escherichia coli str. K-12 substr. MG1655] TATTGTTTTATGGATCACCAAT >b0040(caiT) Score=3.6 Pos=-246 [Escherichia coli str. K-12 substr. MG1655] AGATGTTATTTTTTACTCACAA >b0040(caiT) Score=5.2 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] AAATGTGATACCAATCACAGAA >b2143(cdd) Score=4.3 Pos=-128 [Escherichia coli str. K-12 substr. MG1655] ATTTGCGATGCGTCGCGCATTT >b2143(cdd) Score=5.1 Pos=-78 [Escherichia coli str. K-12 substr. MG1655] TAATGAGATTCAGATCACATAT >b1661(cfa) Score=3.8 Pos=-80 [Escherichia coli str. K-12 substr. MG1655] TTCTGCGAGATTTCTCACAAAG >b1738(chbB) Score=3.7 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] AAATGTGAAGAGGGTCATAACC >b0881(clpS) Score=4 Pos=-164 [Escherichia coli str. K-12 substr. MG1655] AAATTTGAAGCAGTTAACGCTA >b4213(cpdB) Score=3.8 Pos=-118 [Escherichia coli str. K-12 substr. MG1655] AACTGTGATAGTGTCATCATTT >b4213(cpdB) Score=3.8 Pos=-85 [Escherichia coli str. K-12 substr. MG1655] AATTGTGGCATTCTTCACTGTT >b4397(creA) Score=3.7 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] TATTGAGATTTTGTTCTTAATC >b0880(cspD) Score=4 Pos=-180 [Escherichia coli str. K-12 substr. MG1655] TAGCGTTAACTGCTTCAAATTT >b0623(cspE) Score=4 Pos=-114 [Escherichia coli str. K-12 substr. MG1655] TAACGCGACTTTTATCACTTTT >b0598(cstA2) Score=3.7 Pos=-139 [Escherichia coli str. K-12 substr. MG1655] CGGAGTGATCGAGTTAACATTG >b4208(cycA2) Score=4.7 Pos=-198 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGAGCTGTTTCGCGTTA >b0733(cydA) Score=3.6 Pos=-300 [Escherichia coli str. K-12 substr. MG1655] TAAATTGTTCTCGATCAAATTG >b0733(cydA) Score=3.6 Pos=-255 [Escherichia coli str. K-12 substr. MG1655] TAAATTGATCACCGTCGAAAAA >b0432(cyoA) Score=3.8 Pos=-245 [Escherichia coli str. K-12 substr. MG1655] ATAATTGTTTTATTTCACATTG >b4214(cysQ) Score=3.6 Pos=-126 [Escherichia coli str. K-12 substr. MG1655] AACAGTGAAGAATGCCACAATT >b3934(cytR) Score=3.9 Pos=-128 [Escherichia coli str. K-12 substr. MG1655] AAATTCAATATTCATCACACTT >b2010(dacD2) Score=4.3 Pos=-99 [Escherichia coli str. K-12 substr. MG1655] AAATGAGAGGGTAGTCACATTT >b1189(dadA) Score=4.7 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] AGATGTGAGCCAGCTCACCATA >b3528(dctA) Score=4.1 Pos=-143 [Escherichia coli str. K-12 substr. MG1655] TTGTGCGAGCCAGCTCAAACTT >b4381(deoC) Score=4.6 Pos=-149 [Escherichia coli str. K-12 substr. MG1655] TTATTTGAACCAGATCGCATTA >b4381(deoC) Score=4.5 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] AATTGTGATGTGTATCGAAGTG >b4479(dgoR) Score=4.2 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATCTAAATTGTAGTA >b2364(dsdC) Score=3.9 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] TGGAGTGATTTACATCTAAAAA >b2364(dsdC) Score=4.6 Pos=-85 [Escherichia coli str. K-12 substr. MG1655] AATTGAGATATGGTTCACTTTA >b2365(dsdX) Score=4.4 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] TAAAGTGAACCATATCTCAATT >b3260(dusB) Score=4.4 Pos=-297 [Escherichia coli str. K-12 substr. MG1655] AAGTGCGAGCAAGCTCACAAAA >b3260(dusB) Score=4.3 Pos=-212 [Escherichia coli str. K-12 substr. MG1655] AATTGAGAACTTACTCAAATTT >b2927(epd) Score=4.7 Pos=-213 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGATGTGAGTCAGATAA >b3093(exuT) Score=4.2 Pos=-274 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGAGTTAGATCAATAAA >b3093(exuT) Score=5.1 Pos=-152 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGATGGCTCTCACCTTT >b1805(fadD) Score=3.7 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] AATAGTGACGCGCTTCGCAACC >b3081(fadH) Score=3.9 Pos=-112 [Escherichia coli str. K-12 substr. MG1655] CTTTTTGAATCCCATCACAAAC >b1187(fadR) Score=3.9 Pos=-21 [Escherichia coli str. K-12 substr. MG1655] CTGTGTTATGGAAATCTCACTA >b4232(fbp) Score=3.9 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] TTTTTTAATCTGCCGCTCATTT >b0518(fdrA) Score=3.8 Pos=-213 [Escherichia coli str. K-12 substr. MG1655] TTATTTGATAATCCGCTCACTT >b0518(fdrA) Score=4.7 Pos=-105 [Escherichia coli str. K-12 substr. MG1655] CTGTGTGATATTCATCACCTTA >b0041(fixA) Score=4.1 Pos=-215 [Escherichia coli str. K-12 substr. MG1655] ATTGGTGATCCATAAAACAATA >b0041(fixA) Score=4 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] ATTGGTGAGGAACTTAACAATA >b1892(flhD) Score=5.1 Pos=-280 [Escherichia coli str. K-12 substr. MG1655] TTGTGTGATCTGCATCACGCAT >b0904(focA) Score=3.6 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] TATTTTTATTTGGATAATCAAA >b0904(focA) Score=3.8 Pos=-78 [Escherichia coli str. K-12 substr. MG1655] AGATATGATCTATATCAATTTC >b2169(fruB) Score=4.3 Pos=-178 [Escherichia coli str. K-12 substr. MG1655] AATTGTGCAGCACATCAAACTT >b3949(frwC) Score=4 Pos=-202 [Escherichia coli str. K-12 substr. MG1655] ATTTGCGACGCGTCTCACAAGA >b3949(frwC) Score=4.3 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] AGTTATGAGGCGGATCGCATTT >b3949(frwC) Score=3.9 Pos=-57 [Escherichia coli str. K-12 substr. MG1655] TATTGTTTCCTCCATCAAAAAT >b0479(fsr) Score=3.7 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] TAGTCTGGTAATAATCACAAAT >b2800(fucA) Score=4.1 Pos=-144 [Escherichia coli str. K-12 substr. MG1655] TTAGTTGAACCAGGTCACAAAA >b2800(fucA) Score=4 Pos=-54 [Escherichia coli str. K-12 substr. MG1655] TAGTGTGAAAGGAACAACATTA >b2801(fucP) Score=4.9 Pos=-207 [Escherichia coli str. K-12 substr. MG1655] TAAAGTGATGGTAGTCACATAA >b2801(fucP) Score=4.5 Pos=-167 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGACCGCCGTCATATTA >b4140(fxsA) Score=4.1 Pos=-202 [Escherichia coli str. K-12 substr. MG1655] TACCGTAATCTGGATCACTTTA >b4140(fxsA) Score=4.3 Pos=-152 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGAAATAGATCACCGCT >b0759(galE2) Score=3.8 Pos=-78 [Escherichia coli str. K-12 substr. MG1655] TAATTTATTCCATGTCACACTT >b2943(galP) Score=3.6 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] TATGATGATATAACTCAATTAT >b2943(galP) Score=4.9 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TGATGTGATTTGCTTCACATCT >b1779(gapA) Score=5.3 Pos=-226 [Escherichia coli str. K-12 substr. MG1655] AATCGTGATGAAAATCACATTT >b3128(garD) Score=4.2 Pos=-210 [Escherichia coli str. K-12 substr. MG1655] TATTTTGAGCATATGCACATAA >b3128(garD) Score=4.4 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] ATGATTGACATTGATCACATTT >b3128(garD) Score=3.7 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] AAATGAGACCAGGTCCTCATTT >b3127(garP) Score=4.4 Pos=-269 [Escherichia coli str. K-12 substr. MG1655] AAATGTGATCAATGTCAATCAT >b2388(glk) Score=4.1 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] TTGTGTGACCCAGATCGATATT >b3870(glnA) Score=4.2 Pos=-269 [Escherichia coli str. K-12 substr. MG1655] CTTTGTGATCGCTTTCACGGAG >b2241(glpA) Score=4.6 Pos=-165 [Escherichia coli str. K-12 substr. MG1655] AAATGTGAATTGCCGCACACAT >b3426(glpD) Score=4.4 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] TAATGTTATACATATCACTCTA >b3425(glpE) Score=4.7 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] TAGAGTGATATGTATAACATTA >b3927(glpF) Score=4 Pos=-142 [Escherichia coli str. K-12 substr. MG1655] TTTTATGACGAGGCACACACAT >b2240(glpT) Score=3.7 Pos=-219 [Escherichia coli str. K-12 substr. MG1655] TTGTTTGATTTCGCGCATATTC >b2240(glpT) Score=3.6 Pos=-179 [Escherichia coli str. K-12 substr. MG1655] AAACGTGATTTCATGCGTCATT >b2240(glpT) Score=4.6 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] ATGTGTGCGGCAATTCACATTT >b2551(glyA) Score=3.8 Pos=-229 [Escherichia coli str. K-12 substr. MG1655] GAATGTGATGAAGTGAAAAATT >b3437(gntK) Score=4.8 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] AAATTTGAAGTAGCTCACACTT >b3212(gltB) Score=4.2 Pos=-199 [Escherichia coli str. K-12 substr. MG1655] AATTTTGCGCTAAAGCACATTT >b3805(hemC) Score=4.2 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] AAACGTGATCAATTTAACACCT >b1237(hns) Score=4.1 Pos=-229 [Escherichia coli str. K-12 substr. MG1655] AAATGTGACATGAATCAGGAAG >b0125(hpt) Score=5.3 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] ATGTGTGATCGTCATCACAATT >b4267(idnD) Score=5.1 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] TGACGTGATCTTCATCACAAAT >b0118(acnB) Score=3.5 Pos=-144 [Escherichia coli str. K-12 substr. MG1655] TTTTGTAAACAGATTAACACCT >b0344(lacZ) Score=4.7 Pos=-110 [Escherichia coli str. K-12 substr. MG1655] TAATGTGAGTTAGCTCACTCAT >b1677(lpp) Score=3.6 Pos=-56 [Escherichia coli str. K-12 substr. MG1655] TTGTGTAATACTTGTAACGCTA >b2289(lrhA) Score=4.2 Pos=-189 [Escherichia coli str. K-12 substr. MG1655] TTCTGTGATCTACTTCAGGCAT >b1513(lsrA) Score=4.3 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] ATCTGTGATGGCAACCACAGTT >b0459(maa) Score=4.8 Pos=-97 [Escherichia coli str. K-12 substr. MG1655] CTATGTGATCTTTATCACACAG >b2463(maeB) Score=3.9 Pos=-257 [Escherichia coli str. K-12 substr. MG1655] ATGAGTGCGTTAATTCACACTT >b4034(malE) Score=4.4 Pos=-195 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGATGTTGCTTGCAAAA >b4034(malE) Score=4 Pos=-161 [Escherichia coli str. K-12 substr. MG1655] TTATGTGCGCATCTCCACATTA >b4034(malE) Score=4.3 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] TTCTGTAACAGAGATCACACAA >b4035(malK) Score=4.4 Pos=-254 [Escherichia coli str. K-12 substr. MG1655] TTGTGTGATCTCTGTTACAGAA >b4035(malK) Score=3.9 Pos=-225 [Escherichia coli str. K-12 substr. MG1655] TAATGTGGAGATGCGCACATAA >b4035(malK) Score=3.7 Pos=-191 [Escherichia coli str. K-12 substr. MG1655] TTTTGCAAGCAACATCACGAAA >b3417(malP) Score=4.5 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] TTAAGTGGTTGAGATCACATTT >b3571(malS) Score=4.2 Pos=-269 [Escherichia coli str. K-12 substr. MG1655] ATTTGAGAGTTGAATCTCAAAT >b3571(malS) Score=4.1 Pos=-152 [Escherichia coli str. K-12 substr. MG1655] AAATGTGGGGGTTATCGCAAAA >b3571(malS) Score=3.6 Pos=-118 [Escherichia coli str. K-12 substr. MG1655] TTGCGCGAGATCGCTCACCCTT >b3418(malT) Score=4.3 Pos=-142 [Escherichia coli str. K-12 substr. MG1655] AATTGTGACACAGTGCAAATTC >b1621(malX) Score=4.1 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] TTATGTGACAGATAAAACGTTT >b1621(malX) Score=4.4 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] TAATGTGATTTATGCCTCACTA >b1818(manY) Score=3.8 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] TATTGTGTTGATTATCACTCAG >b2150(mglB) Score=4.5 Pos=-270 [Escherichia coli str. K-12 substr. MG1655] ATCTGTGAGTGATTTCACAGTA >b2813(mltA) Score=3.9 Pos=-164 [Escherichia coli str. K-12 substr. MG1655] TTTTTTTACCCCGATCACGGAT >b2701(mltB) Score=4.6 Pos=-184 [Escherichia coli str. K-12 substr. MG1655] AAGTGTTATTTTGATCGCAAAA >b0678(nagB) Score=4.3 Pos=-212 [Escherichia coli str. K-12 substr. MG1655] AAATTTAATTCGTATCGCAAAT >b0678(nagB) Score=4.6 Pos=-178 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGAGTTTTGTCACCAAA >b0679(nagE) Score=4.4 Pos=-176 [Escherichia coli str. K-12 substr. MG1655] TTTGGTGACAAAACTCACAAAA >b0679(nagE) Score=4.2 Pos=-142 [Escherichia coli str. K-12 substr. MG1655] ATTTGCGATACGAATTAAATTT >b3225(nanA) Score=4.6 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] TTTAGTGAAGCAGATCGCATTA >b1109(ndh) Score=3.9 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] AAACTTGATTAACATCAATTTT >b3397(nudE) Score=3.7 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] AAGCGTGTCCGATATCGCACAA >b2393(nupC) Score=4 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] TAATGTTAGCACATTTACATAA >b2393(nupC) Score=3.8 Pos=-84 [Escherichia coli str. K-12 substr. MG1655] TAGTGTGTGTCAGATCTCGTTT >b2393(nupC) Score=4.1 Pos=-31 [Escherichia coli str. K-12 substr. MG1655] AAATTTAACCTGCCTCATATTT >b2964(nupG) Score=5.2 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] AAATGTTATCCACATCACAATT >b2964(nupG) Score=3.8 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] TTATTTGCCACAGGTAACAAAA >b0957(ompA) Score=4 Pos=-188 [Escherichia coli str. K-12 substr. MG1655] ATGCCTGACGGAGTTCACACTT >b0929(ompF) Score=4.4 Pos=-242 [Escherichia coli str. K-12 substr. MG1655] AAATATGACGGTGTTCACAAAG >b3599(mtlA) Score=4.5 Pos=-206 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATGAACGTCACGTCA >b3405(ompR) Score=3.9 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] TAACGTGATCATATCAACAGAA >b1256(ompW) Score=4.9 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] AAAATTGATTTAAATCACATTA >b1256(ompW) Score=3.8 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TAATGTGATCTATGTAGGATCA >b4376(osmY) Score=4.4 Pos=-266 [Escherichia coli str. K-12 substr. MG1655] AATTGTGATCTATATTTAACAA >b3403(pck) Score=4.2 Pos=-240 [Escherichia coli str. K-12 substr. MG1655] GAATGCGATTCCACTCACAATA >b3403(pck) Score=4 Pos=-137 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGACAGGAATCACGGAG >b0113(pdhR) Score=3.8 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] AAATGTGCACAGTTTCATGATT >b1127(pepT) Score=3.6 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] AAAAGTGACCTGACGCAATATT >b3363(ppiA) Score=4.2 Pos=-204 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATCTGTTTAAATGTT >b3363(ppiA) Score=4.2 Pos=-151 [Escherichia coli str. K-12 substr. MG1655] AGAGGTGATTTTGATCACGGAA >b1101(ptsG) Score=4.4 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] AAACGTGATAGCCGTCAAACAA >b2415(ptsH) Score=3.9 Pos=-209 [Escherichia coli str. K-12 substr. MG1655] TTTTATGATTTGGTTCAATTCT >b1015(putP) Score=3.6 Pos=-207 [Escherichia coli str. K-12 substr. MG1655] AAATGTGAGAGAGTGCAACCTG >b1951(rcsA) Score=4 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] TGTTTTAAGCTCACTCACATAT >b3904(rhaB) Score=3.8 Pos=-162 [Escherichia coli str. K-12 substr. MG1655] AAATGCGGTGAGCATCACATCA >b3904(rhaB) Score=4.4 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] AATTGTGAACATCATCACGTTC >b3905(rhaS) Score=4.5 Pos=-182 [Escherichia coli str. K-12 substr. MG1655] GAACGTGATGATGTTCACAATT >b3905(rhaS) Score=4.5 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] TGATGTGATGCTCACCGCATTT >b3907(rhaT) Score=4.1 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] AGATGTGAAGCAAATCACCCAC >b0610(rnk) Score=3.8 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] GAATGTGACGCAAATCACTTCA >b2796(sdaC) Score=4.2 Pos=-179 [Escherichia coli str. K-12 substr. MG1655] ATTTGAGATCAAGATCACTGAT >b2913(serA) Score=4.1 Pos=-210 [Escherichia coli str. K-12 substr. MG1655] TTTGGTGACATGTGTCACGCTT >b2170(setB) Score=4.6 Pos=-211 [Escherichia coli str. K-12 substr. MG1655] AAGTTTGATGTGCTGCACAATT >b3908(sodA) Score=3.8 Pos=-161 [Escherichia coli str. K-12 substr. MG1655] GTGGGTGATTTGCTTCACATCT >b2175(spr) Score=4.1 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGCGTTAGTCCACAGAT >b2702(srlA) Score=4.4 Pos=-93 [Escherichia coli str. K-12 substr. MG1655] TTTTGCGATCAAAATAACACTT >b2464(talA) Score=4 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] TTTTTTGATGCGTTTAGCGAAA >b2464(talA) Score=3.9 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGAATTAACGCACTCAT >b3118(tdcA) Score=4 Pos=-225 [Escherichia coli str. K-12 substr. MG1655] TGATGTTATCGCCATAAAATAT >b3118(tdcA) Score=4.7 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGAGTGGTCGCACATAT >b0452(tesB) Score=3.9 Pos=-138 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGGCACACATCACGCAT >b0001(thrL) Score=3.8 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] TTTATTGACTTAGGTCACTAAA >b4240(treB) Score=3.8 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] AATTGTGATCTTCGCTGCGTTT >b0411(tsx) Score=3.7 Pos=-250 [Escherichia coli str. K-12 substr. MG1655] TTTTGTTACTCTGCTTACATCA >b0411(tsx) Score=3.9 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] AACTGTGAAACGAAACATATTT >b3831(udp) Score=5.2 Pos=-144 [Escherichia coli str. K-12 substr. MG1655] TTATGTGATTTGCATCACTTTT >b3831(udp) Score=4.2 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] CATGGTGATGAGTATCACGAAA >b0480(ushA) Score=4 Pos=-174 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGATTATTACCAGACTA >b3092(uxaC) Score=4.5 Pos=-232 [Escherichia coli str. K-12 substr. MG1655] AAAGGTGAGAGCCATCACAAAT >b3092(uxaC) Score=4.4 Pos=-110 [Escherichia coli str. K-12 substr. MG1655] TTTATTGATCTAACTCACGAAA >b4322(uxuA) Score=3.8 Pos=-271 [Escherichia coli str. K-12 substr. MG1655] TGTTGCGATGAATGTCACATCC >b4322(uxuA) Score=4.5 Pos=-186 [Escherichia coli str. K-12 substr. MG1655] TCTTGTGATGTGGTTAACCAAT >b3565(xylA) Score=3.9 Pos=-224 [Escherichia coli str. K-12 substr. MG1655] ATTTATGACCGAGATCTTACTT >b3565(xylA) Score=4.2 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] TTTTGCGAGCGAGCGCACACTT >b3566(xylF) Score=4.2 Pos=-253 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGCGCTCGCTCGCAAAA >b3566(xylF) Score=3.7 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] AAGTAAGATCTCGGTCATAAAT >b0129(yadI) Score=4.1 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] AGTTTTGACGGCTATCACCCTT >b0162(cdaR) Score=3.9 Pos=-109 [Escherichia coli str. K-12 substr. MG1655] ATCTGTGAACTTCACCACAACT >b0328(yahN) Score=3.9 Pos=-41 [Escherichia coli str. K-12 substr. MG1655] CTTTGTGATCTCTCTCGCACCC >b0453(ybaY) Score=4.3 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] ATGCGTGATGTGTGCCACACTT >b0631(ybeD) Score=3.6 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] AAGTGTAATTTCCGTCCCCATA >b0790(ybhP) Score=4.2 Pos=-56 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGACGCCGACTACACTA >b0791(ybhQ) Score=3.9 Pos=-98 [Escherichia coli str. K-12 substr. MG1655] TAGTGTAGTCGGCGTCACAAAA >b0796(ybiH) Score=4.5 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGACGCAGCGCATAAAT >b0819(ybiS) Score=4.7 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] AAATGTGATTTCGTACACATCT >b0820(ybiT) Score=4.4 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] AGATGTGTACGAAATCACATTT >b0898(ycaD) Score=4.2 Pos=-29 [Escherichia coli str. K-12 substr. MG1655] AAATTTGAACTTCCTCACGGTT >b1036(ycdZ) Score=4 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] AAATGTGTGCTCGATCTCATTC >b1036(ycdZ) Score=3.7 Pos=-50 [Escherichia coli str. K-12 substr. MG1655] ATGTGTGCTCGATCTCATTCAT >b1111(ycfQ) Score=5.3 Pos=-175 [Escherichia coli str. K-12 substr. MG1655] AGATGTGATCTGGATCACATAC >b1112(ycfR) Score=3.7 Pos=-114 [Escherichia coli str. K-12 substr. MG1655] ATTAATGATTGTTATAAAAAAT >b1112(ycfR) Score=4.8 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] GTATGTGATCCAGATCACATCT >b1188(ycgB) Score=4.4 Pos=-235 [Escherichia coli str. K-12 substr. MG1655] TATGGTGAGCTGGCTCACATCT >b1242(ychE) Score=5.1 Pos=-257 [Escherichia coli str. K-12 substr. MG1655] TTACGTGATCCAAATCAAATTT >b1205(ychH) Score=4.5 Pos=-105 [Escherichia coli str. K-12 substr. MG1655] AATTGTGATCACGCCCGCACAT >b1426(ydcH) Score=3.9 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] AAACACGATCCCGCTCGCATTT >b1422(ydcI) Score=3.7 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] TTTTGCAATCAAGTTATCATAA >b1431(ydcL) Score=4 Pos=-216 [Escherichia coli str. K-12 substr. MG1655] GGATGTGAAATTAATCACAGTA >b1528(sotB) Score=4.9 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] AAACGCGATCCAGATCACAAAT >b1598(ydgD) Score=4 Pos=-93 [Escherichia coli str. K-12 substr. MG1655] TTATCTGATTTTACTCCCACTT >b1654(ydhD) Score=3.6 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] ATATTTGAAATGCAACAAATAG >b1657(ydhP) Score=4.3 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATTGCTGTCATGCTT >b1729(tcyP) Score=3.9 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] ATATAAGAGCCAGCTCACAGTT >b1778(msrB) Score=5.2 Pos=-137 [Escherichia coli str. K-12 substr. MG1655] AAATGTGATTTTCATCACGATT >b1795(yeaQ) Score=4.2 Pos=-98 [Escherichia coli str. K-12 substr. MG1655] CTCCGTGATGCTCGTCACAAAT >b1853(hexR) Score=3.9 Pos=-151 [Escherichia coli str. K-12 substr. MG1655] AAATCTGACACTGATCATGTTA >b1915(yecF) Score=3.7 Pos=-260 [Escherichia coli str. K-12 substr. MG1655] AAATGTGACAAAAATTGACTTT >b2063(yegH) Score=4.6 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] AATTGTGACATTTGTCATACAA >b2181(yejG) Score=3.7 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] AAACGTGACCACGCCCGCAGAT >b2295(yfbV) Score=3.6 Pos=-263 [Escherichia coli str. K-12 substr. MG1655] ATTTATGATTAACATCATGCAC >b2295(yfbV) Score=4.1 Pos=-54 [Escherichia coli str. K-12 substr. MG1655] AGTTGTGAATTTGCACAAATTT >b2389(yfeO) Score=4.1 Pos=-109 [Escherichia coli str. K-12 substr. MG1655] AATATCGATCTGGGTCACACAA >b2471(yffB) Score=3.8 Pos=-246 [Escherichia coli str. K-12 substr. MG1655] GTATGTGATACACAGCAACATT >b2597(raiA) Score=4.8 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] TTATGAGATTTTCATCACACAT >b2579(grcA) Score=4.2 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] TTTATTGATTTAAATCAAAGAT >b2735(ygbI) Score=3.7 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] TTGTTTGATATTGTGAATATAA >b2735(ygbI) Score=5.2 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] TATGGTGATCTGATTCACATAA >b2736(ygbJ) Score=4.9 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] TTATGTGAATCAGATCACCATA >b3110(yhaO) Score=4.6 Pos=-228 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATCTGCCGCAAATAG >b3209(elbB) Score=3.7 Pos=-91 [Escherichia coli str. K-12 substr. MG1655] ATTTGTTACATGAATCAGTTAA >b3209(elbB) Score=4 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] ATGTGTGATGCGTACCATTTTT >b3238(yhcN) Score=5.1 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATATGGGTCACGAAA >b3242(yhcR) Score=5.4 Pos=-167 [Escherichia coli str. K-12 substr. MG1655] AAAAGTGATTTAGATCACATAA >b3523(yhjE) Score=4.5 Pos=-155 [Escherichia coli str. K-12 substr. MG1655] TTATGTGAAGCATTTCATAGAA >b3575(yiaK) Score=4.1 Pos=-175 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGCCGTAGTTCACGATC >b3646(yicG) Score=4.4 Pos=-58 [Escherichia coli str. K-12 substr. MG1655] AATCGTGACAATGCGCACAAAT >b3697(yidA) Score=4.1 Pos=-56 [Escherichia coli str. K-12 substr. MG1655] ATTTTTGAGCGGAATCGCGTTA >b3765(yifB) Score=4.2 Pos=-266 [Escherichia coli str. K-12 substr. MG1655] TTTTATGATGCGTTTAATAATT >b3883(yihV) Score=3.6 Pos=-76 [Escherichia coli str. K-12 substr. MG1655] AAAATTGACAGCCGTCACTTTT >b4060(yjcB) Score=5.7 Pos=-149 [Escherichia coli str. K-12 substr. MG1655] AATTGTGATATAGTTCACAAAA >b4190(yjfP) Score=3.8 Pos=-139 [Escherichia coli str. K-12 substr. MG1655] AATTGTTACCTGGTACGCGATT >b4354(cstA2) Score=5.7 Pos=-231 [Escherichia coli str. K-12 substr. MG1655] ATATGTGATATGAATCACATAT >b4380(yjjI) Score=3.9 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] CACTTCGATACACATCACAATT >b4380(yjjI) Score=5 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] TAATGCGATCTGGTTCAAATAA >b1594(mlc) Score=4.1 Pos=-108 [Escherichia coli str. K-12 substr. MG1655] AAATGTGCTGTTAATCACATGC >b2141(yohJ) Score=4.9 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] TAATGTGATCGGTAGCACGTTT >b2844(yqeF) Score=4.6 Pos=-91 [Escherichia coli str. K-12 substr. MG1655] CTTTGTGATAAAAATCACTTTT >b3279(yrdA) Score=3.8 Pos=-220 [Escherichia coli str. K-12 substr. MG1655] TCCTGTGAAGTGTTTCACGTTG >b3398(igaA) Score=3.6 Pos=-288 [Escherichia coli str. K-12 substr. MG1655] TTGTGCGATATCGGACACGCTT >b3398(igaA) Score=3.8 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] TACTGTGATGTGCTTAATGATG >b4227(ytfQ) Score=3.7 Pos=-98 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGATGTAACGCAATCTG >b1852(zwf) Score=3.9 Pos=-208 [Escherichia coli str. K-12 substr. MG1655] TAACATGATCAGTGTCAGATTT >b1493(gadB) Score=3.3 Pos=-128 [Escherichia coli str. K-12 substr. MG1655] ATTCGCGTAATATCTCACGATA >b1761(gdhA) Score=3.5 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] TTTCTTGCTTACCGTCACATTC >b0116(lpdA) Score=3.3 Pos=-224 [Escherichia coli str. K-12 substr. MG1655] AATTGTTAACAATTTTGTAAAA >b0113(pdhR) Score=3.7 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] AAACGTTATATATGTCAAGTTG >b3588(aldB) Score=3.7 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] ATTCGTGATAGCTGTCGTAAAG >b3666(uhpT) Score=4.8 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] AAGCGTGATGCATCTCACCTTT >b4268(idnK) Score=4 Pos=-107 [Escherichia coli str. K-12 substr. MG1655] TAACGTGATGTGCCTTGTAATT >b4268(idnK) Score=4.8 Pos=-157 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGATGAAGATCACGTCA >b3172(argG) Score=4.6 Pos=-253 [Escherichia coli str. K-12 substr. MG1655] TATAGTGATCCACGCCACATTT >b0034(caiF) Score=3.8 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] AAGCAGGATTTAGCTCACACTT >b4014(aceB) Score=3.6 Pos=-117 [Escherichia coli str. K-12 substr. MG1655] AATTGTTTTTGATTTTGCATTT >b4111(proP) Score=5.1 Pos=-227 [Escherichia coli str. K-12 substr. MG1655] ATGTGTGAAGTTGATCACAAAT >b4123(dcuB) Score=3.5 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] GACTGTGATCTATTCAGCAAAA >b3415(gntT) Score=4.3 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] TAATATGACCAACCTCTCATAA >b3453(ugpB) Score=3.6 Pos=-182 [Escherichia coli str. K-12 substr. MG1655] ATCCGTGCCCCATCTCCCATTT >b3574(yiaJ) Score=3.7 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] GATCGTGAACTACGGCACACTT >b4003(zraS) Score=3.6 Pos=-255 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGTTCCGTTTCATGGTT >b4000(hupA) Score=3.4 Pos=-179 [Escherichia coli str. K-12 substr. MG1655] AAACGTGATTTAACGCCTGATT >b3806(cyaA) Score=4 Pos=-172 [Escherichia coli str. K-12 substr. MG1655] AGGTGTTAAATTGATCACGTTT >b3707(tnaC) Score=5 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] GATTGTGATTCGATTCACATTT >b4193(ulaA) Score=3.8 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] ATTTGCGGGTCGCGTCACATTT >b4193(ulaA) Score=3.8 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] TGTTGTGATTACTTTTGAAAAT >b3356(yhfA) Score=4.2 Pos=-187 [Escherichia coli str. K-12 substr. MG1655] TAATGTGACGTCCTTTGCATAC >b1620(malI) Score=3.4 Pos=-104 [Escherichia coli str. K-12 substr. MG1655] TTTAGTGAGGCATAAATCACAT >b4663(azuC) Score=5.7 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TTATGTGATTTGTATCACATAA >b1617(uidA) Score=4.5 Pos=-181 [Escherichia coli str. K-12 substr. MG1655] TAATGCGATCTATATCACGCTG >b1617(uidA) Score=3.4 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] TTTTTTGATCGCGGTGTCAGTT >b4663(azuC) Score=4.9 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] TTTTGTGATGGTTGTCATATTA >b1620(malI) Score=3.9 Pos=-102 [Escherichia coli str. K-12 substr. MG1655] TAGTGAGGCATAAATCACATTA >b1620(malI) Score=3.9 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] AAACGTTTTATCTGTCACATAA >b1493(gadB) Score=3.3 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] TATTGTATTGTTTTTCAATGAA >b0108(ppdD) Score=3.2 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] CTTCGTAACGCCTCGCAAATTT >b1040(csgD) Score=3.9 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] TTTAGTTACATGTTTAACACTT >b0440(hupB) Score=3.9 Pos=-213 [Escherichia coli str. K-12 substr. MG1655] AATAGTGACCTCGCGCAAAATG >b1512(lsrR) Score=4.1 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] AACTGTGGTTGCCATCACAGAT >b0330(prpR) Score=3.7 Pos=-107 [Escherichia coli str. K-12 substr. MG1655] ATATGCGTTTCAGTTAACGTTT >b1493(gadB) Score=3.6 Pos=-297 [Escherichia coli str. K-12 substr. MG1655] TTTTATAAATGCGTTCAAAATA >b0331(prpB) Score=3.7 Pos=-153 [Escherichia coli str. K-12 substr. MG1655] AAACGTTAACTGAAACGCATAT >b1241(adhE) Score=5 Pos=-241 [Escherichia coli str. K-12 substr. MG1655] AAATTTGATTTGGATCACGTAA >b1388(paaA) Score=3.6 Pos=-45 [Escherichia coli str. K-12 substr. MG1655] TGTTTTTAATTAATTCACGAAA >b2232(ubiG) Score=3.8 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] AACAATGACCGACATCGCATAA >b0907(serC) Score=4.8 Pos=-155 [Escherichia coli str. K-12 substr. MG1655] TTGTGTGATGCAAGCCACATTT >b1388(paaA) Score=3.6 Pos=-76 [Escherichia coli str. K-12 substr. MG1655] TTGTGTAACTTTCATAAAACAA >b1388(paaA) Score=4.3 Pos=-97 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGATTTTACTTAACTAT >b1387(paaN) Score=3.8 Pos=-109 [Escherichia coli str. K-12 substr. MG1655] AGTTGCTATACAGATCGCATAG >b1387(paaN) Score=3.7 Pos=-175 [Escherichia coli str. K-12 substr. MG1655] AACTGTGACGGATTTCGCACCC >b1387(paaN) Score=3.6 Pos=-261 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGAATTAATTAAAAACA >b1040(csgD) Score=3.3 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] TAGTTTTATATTTTACCCATTT >b2151(galS) Score=3.9 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] TGCTGTGACTCGATTCACGAAG >b2151(galS) Score=3.5 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] GATAACGATCTGGATCACATTC >b2146(yeiT) Score=4.8 Pos=-112 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGAATCTTTTCACAGTT >b1421(trg) Score=3.4 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] TTGCGTGCTGTTTTCCAGAATT >b2009(sbmC) Score=3.5 Pos=-93 [Escherichia coli str. K-12 substr. MG1655] GAGTGCGAGTCTGCTCGCATAA >b2508(guaB) Score=4.2 Pos=-165 [Escherichia coli str. K-12 substr. MG1655] ACATGTGAGCGAGATCAAATTC >b2535(csiE) Score=3.5 Pos=-104 [Escherichia coli str. K-12 substr. MG1655] TTCTGTGACGCTTGCCAACATT >b2741(rpoS) Score=4.2 Pos=-270 [Escherichia coli str. K-12 substr. MG1655] TAATCTGATTATCATCAAACAT >b3076(ebgA) Score=4.3 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] TTTCGTGATCCAGTTAAAGTAA >b3049(glgS) Score=3.8 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] AAGTGTGATCGGGGACAATATA >b3049(glgS) Score=3.4 Pos=-203 [Escherichia coli str. K-12 substr. MG1655] ATCTGTGTTAATAATAACACAG >b3049(glgS) Score=3.4 Pos=-225 [Escherichia coli str. K-12 substr. MG1655] AATAGTTTCCTTGCTTACATTT >b2942(metK) Score=3.6 Pos=-200 [Escherichia coli str. K-12 substr. MG1655] GAATGAGACACGATTCAAAAAA >b3599(mtlA) Score=3.3 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] TTCAGTGCCAGATTTCGCAGTA # TF - GlpR: b3423 >b3425(glpE) Score=5.3 Pos=-155 [Escherichia coli str. K-12 substr. MG1655] TGTTCGTTATCGAACA >b3423(glpR) Score=5.1 Pos=-35 [Escherichia coli str. K-12 substr. MG1655] TGCGCGAAAACGAAAA >b3927(glpF) Score=4.2 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] GGCGCGATAACGCTCA >b3927(glpF) Score=5.2 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] TGCTCGTTAACGATAA >b3426(glpD) Score=5.3 Pos=-50 [Escherichia coli str. K-12 substr. MG1655] TGTTCGATAACGAACA >b2240(glpT) Score=3.9 Pos=-218 [Escherichia coli str. K-12 substr. MG1655] TGTTTGATTTCGCGCA >b2240(glpT) Score=3.7 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] TGCGTCATTTTGAACA >b2241(glpA) Score=5 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] TGCGCGAAATCAAACA # TF - Fur: b0683 >b0683(fur) Score=4.9 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] TATAATGATACGCATTATC >b0592(fepB) Score=4.7 Pos=-230 [Escherichia coli str. K-12 substr. MG1655] GAAAATGAGAAGCATTATT >b1674(ydhY) Score=4.5 Pos=-267 [Escherichia coli str. K-12 substr. MG1655] TCAAATGATAATAAATATC >b1496(yddA) Score=4.4 Pos=-4 [Escherichia coli str. K-12 substr. MG1655] GCTAATGATAACCATTCCC >b0150(fhuA) Score=4.5 Pos=-51 [Escherichia coli str. K-12 substr. MG1655] AATAATCATTCTCGTTTAC >b0150(fhuA) Score=4.4 Pos=-57 [Escherichia coli str. K-12 substr. MG1655] CTTTATAATAATCATTCTC >b0590(fepD) Score=4.9 Pos=-31 [Escherichia coli str. K-12 substr. MG1655] GATAATTAATTTCATTATC >b0590(fepD) Score=4.8 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] GATAACGATAATTAATTTC >b3408(feoA) Score=3.4 Pos=-138 [Escherichia coli str. K-12 substr. MG1655] GcTgATagaAAcCATTcTC >b2155(cirA) Score=4.3 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] TGGATTGATAATTGTTATC >b2155(cirA) Score=4.4 Pos=-195 [Escherichia coli str. K-12 substr. MG1655] GATAATTGTTATCGTTTGC >b1684(sufA) Score=4.4 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] TGAACTGATAATCATTATC >b0805(fiu) Score=4.4 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] GCTTATCAAAATTATTATC >b0805(fiu) Score=4.5 Pos=-117 [Escherichia coli str. K-12 substr. MG1655] CAAAATTATTATCACTTTC >b3441(yhhY) Score=4.7 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] AATAATCATTCTCATTCGC >b3441(yhhY) Score=4.9 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] GACAATAATAATCATTCTC >b3337(bfd) Score=3.9 Pos=-51 [Escherichia coli str. K-12 substr. MG1655] tgaAATaAgAActATTtTC >b0591(ybdA) Score=4.8 Pos=-98 [Escherichia coli str. K-12 substr. MG1655] GATAATGAAATTAATTATC >b0591(ybdA) Score=4.9 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] GAAATTAATTATCGTTATC >b1451(yncD) Score=4.7 Pos=-157 [Escherichia coli str. K-12 substr. MG1655] GGGAATGGTAATCATTATT >b1452(yncE) Score=4.6 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] AATAATGATTACCATTCCC >b3070(yqjH) Score=4.6 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] AACAATCATTATCATTTGC >b3070(yqjH) Score=4.2 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] ATGATTAACAATCATTATC >b0584(fepA) Score=4.1 Pos=-184 [Escherichia coli str. K-12 substr. MG1655] ATTATTGATAACTATTTGC >b0584(fepA) Score=4 Pos=-178 [Escherichia coli str. K-12 substr. MG1655] GATAACTATTTGCATTTGC >b3408(feoA) Score=4.5 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] AGAAACCATTCTCATTATC >b0755(gpmA) Score=5 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] TATAATGAGAATTATTATC >b0755(gpmA) Score=4.7 Pos=-41 [Escherichia coli str. K-12 substr. MG1655] GAGAATTATTATCATTAAA >b1684(sufA) Score=5.1 Pos=-59 [Escherichia coli str. K-12 substr. MG1655] GATAATCATTATCACTAAC >b4367(fhuF) Score=5.1 Pos=-122 [Escherichia coli str. K-12 substr. MG1655] GATAATGATAACCAATATC >b4367(fhuF) Score=4.5 Pos=-99 [Escherichia coli str. K-12 substr. MG1655] GATAATTTTTATCATTTGC >b4367(fhuF) Score=4 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] AGCAATCATTATCATTTAG >b1705(hemP) Score=4.1 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] AATATTGATAATAAGAATC >b1705(hemP) Score=4.6 Pos=-41 [Escherichia coli str. K-12 substr. MG1655] GATAATAAGAATCATTGTT >b4567(yjjZ) Score=4.4 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] GCAAATGATAAAAATTATC >b4567(yjjZ) Score=5.2 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] GATATTGGTTATCATTATC >b0593(entC) Score=4.6 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] AATAATGCTTCTCATTTTC >b0593(entC) Score=5 Pos=-48 [Escherichia coli str. K-12 substr. MG1655] ATAAATGATAATCATTATT >b3908(sodA) Score=5 Pos=-93 [Escherichia coli str. K-12 substr. MG1655] GATAATCATTTTCAATATC >b3908(sodA) Score=4.7 Pos=-99 [Escherichia coli str. K-12 substr. MG1655] GGCATTGATAATCATTTTC >b2392(mntH) Score=4.7 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] GAATTTGATAATCATTCTC >b2392(mntH) Score=4.2 Pos=-62 [Escherichia coli str. K-12 substr. MG1655] GATAATCATTCTCGTTTGG >b4637(uof) Score=4.9 Pos=-4 [Escherichia coli str. K-12 substr. MG1655] TATAATGATACGCATTATC >b3006(exbB) Score=4.1 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] AGTAATGAGAACGACTATC >b4293(fecI) Score=4.7 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] TGTAATGATAACCATTCTC >b4293(fecI) Score=4.1 Pos=-57 [Escherichia coli str. K-12 substr. MG1655] GATAACCATTCTCATATTA >b1243(oppA) Score=4.7 Pos=-245 [Escherichia coli str. K-12 substr. MG1655] GGTAATGAGAATAATTAAC >b1905(ftnA) Score=3.4 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] GgTAATGcgttTtATTccC >b1916(sdiA) Score=4.4 Pos=-38 [Escherichia coli str. K-12 substr. MG1655] ATAAATGATACTCACTCTC >b1905(ftnA) Score=3 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] GcgttTtATtccCATTcgt >b3337(bfd) Score=3.9 Pos=-45 [Escherichia coli str. K-12 substr. MG1655] aAgAActATttTCATTtat # TF - NadR: b4390 >b0750(nadA) Score=6.4 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] TGTTTAGCATATAAAACA >b0931(pncB) Score=5.9 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] TGTTTATTGTACTAAACG >b2574(nadB) Score=6.4 Pos=-24 [Escherichia coli str. K-12 substr. MG1655] TGTTTAGTAAATTAAACA # TF - DeoR: b0840 >b0411(tsx) Score=4.5 Pos=-247 [Escherichia coli str. K-12 substr. MG1655] TGTTACTCTGCTTACA >b2964(nupG) Score=4.9 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] TGTTATCCACATCACA >b2964(nupG) Score=4.6 Pos=-78 [Escherichia coli str. K-12 substr. MG1655] TGATAGAATCCCATCA >b4381(deoC) Score=6 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] TGTTAGAATACTAACA >b2393(nupC) Score=4.4 Pos=-180 [Escherichia coli str. K-12 substr. MG1655] TGTTAGCACATTTACA # TF - GalR/GalS: b2837, b2151 >b0759(galE) Score=6.6 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] TTGTGTAAACGATTCCACTA >b2151(galS) Score=5.5 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] GGCTGTAACCGTTTCCATTG >b2943(galP) Score=5 Pos=-282 [Escherichia coli str. K-12 substr. MG1655] AACTGAAACCGATTACACCA >b2943(galP) Score=6.2 Pos=-100 [Escherichia coli str. K-12 substr. MG1655] TAGTGTAAGCGATTACACTG >b2150(mglB) Score=5.3 Pos=-287 [Escherichia coli str. K-12 substr. MG1655] CGATGTAACCGCTTTCAATC >b4227(ytfQ) Score=4.6 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] AGATGAAAGCGATTACAAAC >b4227(ytfQ) Score=4.5 Pos=0 [Escherichia coli str. K-12 substr. MG1655] ATGTGGAAACGCTTACTTAT >b2837(galR) Score=5.2 Pos=-32 [Escherichia coli str. K-12 substr. MG1655] GAATGTAAGCGTTTACCCAC # TF - MetR: b3828 >b3828(metR) Score=4.9 Pos=-13 [Escherichia coli str. K-12 substr. MG1655] GTGAAGGACTTTCAT >b3828(metR) Score=3.7 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] GCGCAAATTATTCAT >b3941(metF) Score=3.7 Pos=-295 [Escherichia coli str. K-12 substr. MG1655] ATGAAATATATTGAA >b3941(metF) Score=4.7 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] CTGAAGTTTTTTCAT >b3941(metF) Score=4.6 Pos=0 [Escherichia coli str. K-12 substr. MG1655] ATGAGCTTTTTTCAC >b3829(metE) Score=4.9 Pos=-238 [Escherichia coli str. K-12 substr. MG1655] ATGAAAGTCCTTCAC >b4013(metA) Score=4.5 Pos=-111 [Escherichia coli str. K-12 substr. MG1655] TTGAAACTTTCTCAC >b2551(glyA) Score=4.8 Pos=-217 [Escherichia coli str. K-12 substr. MG1655] GTGAAAAATTTGCAT >b2552(hmp) Score=4.8 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] ATGCAAATTTTTCAC >b2687(luxS) Score=4.2 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] ATGCGCGTCTTTCAT >b4019(metH) Score=4.3 Pos=-109 [Escherichia coli str. K-12 substr. MG1655] TTGAACAAATCTCAT # TF - NikR: b3481 >b3476(nikA) Score=8 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] GTATGACGAATACTTAAAATCGTCATAC # TF - IlvY: b3773 >b3773(ilvY) Score=4.7 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] ATTGCGGAAATTGATAT >b3773(ilvY) Score=5.2 Pos=-39 [Escherichia coli str. K-12 substr. MG1655] ATTGCAATTTTTGCAAC >b3774(ilvC) Score=5.2 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] GTTGCAAAAATTGCAAT >b3774(ilvC) Score=4.7 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] ATATCAATTTCCGCAAT # TF - NtrC: b3868 >b3869(ntrB) Score=6.1 Pos=-38 [Escherichia coli str. K-12 substr. MG1655] TGCACTAAAATGGTGCA >b3870(glnA) Score=5.9 Pos=-221 [Escherichia coli str. K-12 substr. MG1655] TGCACCAACATGGTGCT >b3870(glnA) Score=5.4 Pos=-189 [Escherichia coli str. K-12 substr. MG1655] AGCACTATATTGGTGCA >b1012(rutA) Score=3.9 Pos=-168 [Escherichia coli str. K-12 substr. MG1655] TGCACTCTCATCGCGCA >b1748(astC) Score=4 Pos=-323 [Escherichia coli str. K-12 substr. MG1655] TGCCCGCTTTTGGTGCG >b1488(ddpX) Score=3.5 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] TGCACAAATGTTGATCA >b1488(ddpX) Score=4.1 Pos=-148 [Escherichia coli str. K-12 substr. MG1655] TGCACCAAAACTGCACT >b1748(astC) Score=3.9 Pos=-303 [Escherichia coli str. K-12 substr. MG1655] TGCGTCAGAATGGCGCA >b0450(glnK) Score=5.2 Pos=-137 [Escherichia coli str. K-12 substr. MG1655] TGCACTGTCATAGTGCG >b0655(gltI) Score=4.4 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] TGCACAATAAAGTTGCA >b2309(hisJ) Score=5.5 Pos=-162 [Escherichia coli str. K-12 substr. MG1655] TGCACTATCGTGGTGCA >b0811(glnH) Score=4.9 Pos=-173 [Escherichia coli str. K-12 substr. MG1655] CGCACCAGATTGGTGCC >b0811(glnH) Score=5.5 Pos=-160 [Escherichia coli str. K-12 substr. MG1655] TGCCCCAGAATGGTGCA >b1988(nac) Score=5.1 Pos=-205 [Escherichia coli str. K-12 substr. MG1655] TGAACCATCGTGGTGCA >b0855(potG) Score=5.4 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] CGCACCATTATGGTGCG >b3073(ygjG) Score=4.6 Pos=-215 [Escherichia coli str. K-12 substr. MG1655] TGCCCTGAAAACGTGCA # TF - FadR: b1187 >b0221(fadE) Score=4.5 Pos=-38 [Escherichia coli str. K-12 substr. MG1655] AAGTGGTCAGACCTCCT >b3081(fadH) Score=4.9 Pos=-46 [Escherichia coli str. K-12 substr. MG1655] AACTCATCCGACCACAT >b2342(fadI) Score=5.1 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] ATCAGGTCAGACCACTT >b3846(fadB) Score=5.1 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] ATCTGGTACGACCAGAT >b0954(fabA) Score=4.5 Pos=-74 [Escherichia coli str. K-12 substr. MG1655] AACTGATCGGACTTGTT >b4018(iclR) Score=4.5 Pos=-86 [Escherichia coli str. K-12 substr. MG1655] AACTCATCGGATCAGTT >b0443(fadM) Score=4.5 Pos=-59 [Escherichia coli str. K-12 substr. MG1655] AAGAGGTCATACCAGTT >b1187(fadR) Score=4.3 Pos=-51 [Escherichia coli str. K-12 substr. MG1655] CTCTGGTATGATGAGTC >b2323(fabB) Score=3.3 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] GGCTGATCGGACTTGTT >b1836(yebV) Score=3.6 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] GACTGGTCGTACCACAA >b2344(fadL) Score=4.4 Pos=-102 [Escherichia coli str. K-12 substr. MG1655] CACTGGTCTGATTTCTA >b2344(fadL) Score=4.2 Pos=-126 [Escherichia coli str. K-12 substr. MG1655] AGCTGGTCCGACCTATA >b1805(fadD) Score=4.4 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] AGCTGGTATGATGAGTT # TF - CueR: b0487 >b0484(copA) Score=6.6 Pos=-67 [Escherichia coli str. K-12 substr. MG1655] ACCTTCCCCTTGCTGGAAGGT >b0123(cueO) Score=6.4 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] ACCTTCCCGTAAGGGGAAGGA # TF - PurR: b1658 >b2905(gcvT) Score=3.8 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] AAGAGAACGATTGCGT >b2938(speA) Score=4 Pos=-208 [Escherichia coli str. K-12 substr. MG1655] AAACAAGAGTTTTCTC >b4006(purH) Score=5.8 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] GCGCAAACGTTTTCGT >b2313(cvpA) Score=5.9 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGTTTTCTT >b0523(purE) Score=5.5 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] ACGCAACCGTTTTCCT >b4177(purA) Score=4.8 Pos=-22 [Escherichia coli str. K-12 substr. MG1655] AAGCAAACGGTGATTT >b2499(purM) Score=5.1 Pos=-79 [Escherichia coli str. K-12 substr. MG1655] TCGCAAACGTTTGCTT >b1658(purR) Score=4.4 Pos=28 [Escherichia coli str. K-12 substr. MG1655] GAGCAAACGTTTCCAC >b1658(purR) Score=5.4 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] AGGCAAACGTTTACCT >b1849(purT) Score=6 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGTTTTCGT >b2557(purL) Score=5.9 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGGTTTCGT >b2508(guaB) Score=5.2 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] ATGCAATCGGTTACGC >b2476(purC) Score=5 Pos=-169 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGTGTGCGT >b3471(yhhQ) Score=3.7 Pos=-159 [Escherichia coli str. K-12 substr. MG1655] AGGTTAACGATTGCGT >b0032(carA) Score=4.9 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] GCGCAAGCGTTTTCCA >b2913(serA) Score=4.5 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGTTCATAT >b0945(pyrD) Score=4.2 Pos=-102 [Escherichia coli str. K-12 substr. MG1655] CGGAAAACGTTTGCGT >b2553(glnB) Score=4.7 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] ATGCAAACGATTTCAA >b1062(pyrC) Score=4.3 Pos=-67 [Escherichia coli str. K-12 substr. MG1655] AGGAAAACGTTTCCGC >b0336(codB) Score=4.6 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] ACGAAAACGATTGCTT >b2551(glyA) Score=4.5 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] AGGTAATCGTTTGCGT >b1207(prs) Score=5 Pos=-358 [Escherichia coli str. K-12 substr. MG1655] AAGAAAACGTTTTCGC >b4246(pyrL) Score=3.7 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] AATAAACCGTTTGCGC >b1131(purB) Score=5.3 Pos=184 [Escherichia coli str. K-12 substr. MG1655] ACGCAATCGGTTACCT >b3654(xanP) Score=4.9 Pos=30 [Escherichia coli str. K-12 substr. MG1655] GCGCAACCGGTTGCGC >b3654(xanP) Score=4.8 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] TGGCAAACGTTTGCTT >b3714(purP) Score=3.7 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] AGTTTAACGTTTTCGT >b3714(purP) Score=4.9 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] ACGCAATCGTTGCCGT >b1687(ydiJ) Score=4.9 Pos=-224 [Escherichia coli str. K-12 substr. MG1655] ACGCAAACGATTTACT >b4064(yjcD) Score=4.1 Pos=-272 [Escherichia coli str. K-12 substr. MG1655] ACGATAACGTTTGCGC >b4064(yjcD) Score=3.9 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] AGCTAAACGTTTGCTT >b0411(tsx) Score=5.6 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] ACGCAATCGATTACGT >b2938(speA) Score=4.2 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] AAGAAACCGGTTGCGC # TF - AscG: b2714 >b2714(ascG) Score=6.3 Pos=-175 [Escherichia coli str. K-12 substr. MG1655] TTAAGAAACCGGTTTCACAA >b2715(ascF) Score=5.1 Pos=-177 [Escherichia coli str. K-12 substr. MG1655] TCAGGTGACCGGTTTCACAA >b2715(ascF) Score=5.8 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TTGTGAAACCGGTTTCTTAA # TF - IscR: b2531 >b3414(nfuA) Score=6.9 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] ATAACCAACTAAAATAGTCAACTAT >b0156(erpA) Score=4.9 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] ATACTTGAACGAAATACCAGGGTAT >b2531(iscR) Score=6.7 Pos=-133 [Escherichia coli str. K-12 substr. MG1655] ATACCCGACTAAATCAGTCAAGTAA >b2531(iscR) Score=5.8 Pos=-108 [Escherichia coli str. K-12 substr. MG1655] ATAGTTGACCAATTTACTCGGGAAT # TF - FruR: b0080 >b1676(pykF) Score=4.9 Pos=-221 [Escherichia coli str. K-12 substr. MG1655] CTTGAATGGTTTCAGC >b3916(pfkA) Score=5.1 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] CCTGAATCAATTCAGC >b1851(edd) Score=4.4 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] ACTGAAACGTTTTTGC >b2169(fruB) Score=5.4 Pos=-35 [Escherichia coli str. K-12 substr. MG1655] GCTGAATCGTTTCAAT >b2415(ptsH) Score=4.7 Pos=-219 [Escherichia coli str. K-12 substr. MG1655] GCTGAATCGATTTTAT >b1817(manX) Score=4.5 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TCTGAATCGATTCGAT >b3403(pckA) Score=4.3 Pos=-286 [Escherichia coli str. K-12 substr. MG1655] GGTGAATCGATACTTT >b3365(nirB) Score=4.6 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] GCTGAATCGTTAAGGT >b2388(glk) Score=4.9 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] GCTGAAACGATAAAGT >b1702(ppsA) Score=4.6 Pos=-102 [Escherichia coli str. K-12 substr. MG1655] GCTTGAACGATTCACC >b2927(epd) Score=5.4 Pos=-137 [Escherichia coli str. K-12 substr. MG1655] GCTGAAGCGTTTCAGT >b1241(adhE) Score=4.6 Pos=-264 [Escherichia coli str. K-12 substr. MG1655] GCTGAAAGGTGTCAGC >b3357(crp) Score=4.3 Pos=-220 [Escherichia coli str. K-12 substr. MG1655] GCTGAAGCGAGACACC >b1136(icdA) Score=4.6 Pos=-246 [Escherichia coli str. K-12 substr. MG1655] GCTGAATCGCTTAACC >b0112(aroP) Score=4.2 Pos=-305 [Escherichia coli str. K-12 substr. MG1655] ATTGAACCGATTCACT >b3956(ppc) Score=4.4 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] GCTGAAGCGATTTCGC >b4014(aceB) Score=4.6 Pos=-250 [Escherichia coli str. K-12 substr. MG1655] CGTTAAGCGATTCAGC >b4232(fbp) Score=4.3 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] GCTGGCGCGATTCACC >b3599(mtlA) Score=4 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] AGTTAACCGATTCAGT >b3919(tpiA) Score=4.6 Pos=-161 [Escherichia coli str. K-12 substr. MG1655] GTTGAACCGATTAAGC >b2288(nuoA) Score=3.6 Pos=-283 [Escherichia coli str. K-12 substr. MG1655] ACGGACACGATTCAAC >b0113(pdhR) Score=4.2 Pos=-251 [Escherichia coli str. K-12 substr. MG1655] AGTGAATCGGTTCAAT >b1779(gapA) Score=3.7 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] ATTGACACGATTCCGC >b3612(gpmM) Score=4.1 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] ATTTTATCGATTCAGC # TF - NorR: b2709 >b2710(norV) Score=5.7 Pos=-178 [Escherichia coli str. K-12 substr. MG1655] CACTGTCAATTTGACTATA >b2710(norV) Score=4.7 Pos=-157 [Escherichia coli str. K-12 substr. MG1655] TATTGTCATATCGACCATT >b2710(norV) Score=4.9 Pos=-133 [Escherichia coli str. K-12 substr. MG1655] GATAGTCATTTTGACTACT >b2709(norR) Score=5 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] AGTAGTCAAAATGACTATC >b2709(norR) Score=5.5 Pos=-48 [Escherichia coli str. K-12 substr. MG1655] AATGGTCGATATGACAATA >b2709(norR) Score=5.1 Pos=-27 [Escherichia coli str. K-12 substr. MG1655] TATAGTCAAATTGACAGTG # TF - SdaR: b0162 >b0162(sdaR) Score=5.3 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] CTTTAGGCATTTGCACAATG >b2789(gudP) Score=4.7 Pos=-385 [Escherichia coli str. K-12 substr. MG1655] TTTCAGGCAAATGCCAGTAA >b3128(garD) Score=4.5 Pos=-250 [Escherichia coli str. K-12 substr. MG1655] CATTGTGCAAATGCTAATTT >b3128(garD) Score=6 Pos=-208 [Escherichia coli str. K-12 substr. MG1655] TTTTGAGCATATGCACATAA >b3127(garP) Score=4.5 Pos=-144 [Escherichia coli str. K-12 substr. MG1655] AAATTAGCATTTGCACAATG >b3127(garP) Score=6 Pos=-186 [Escherichia coli str. K-12 substr. MG1655] TTATGTGCATATGCTCAAAA # TF - NsrR: b4178 >b2552(hmp) Score=5.7 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] GATGCATTTGAGATACATC >b0873(hcp) Score=5.7 Pos=-35 [Escherichia coli str. K-12 substr. MG1655] CATGTATATTAAATATAAC >b1429(tehA) Score=5.4 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] AATGCATTTCAAATATACT >b4209(dnrN) Score=6.4 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] GATGCATTTAAAATACATC >b4070(nrfA) Score=4.3 Pos=-165 [Escherichia coli str. K-12 substr. MG1655] GTGGTATTTTACATGCACT >b4070(nrfA) Score=3.7 Pos=-154 [Escherichia coli str. K-12 substr. MG1655] CATGCACTTACAATTGATT >b1797(yeaR) Score=4.5 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] ATGGTATTTAAAATGCAAA >b2732(ygbA) Score=5.1 Pos=-38 [Escherichia coli str. K-12 substr. MG1655] GATGTAATATAAATACATC >b1654(grxD) Score=4.4 Pos=-135 [Escherichia coli str. K-12 substr. MG1655] CGAATATTTGAAATGCAAC >b1655(ydhO) Score=4.8 Pos=-217 [Escherichia coli str. K-12 substr. MG1655] GTTGCATTTCAAATATTCG >b1684(sufA) Score=4.1 Pos=-248 [Escherichia coli str. K-12 substr. MG1655] TAGTCATTTTCAATACAAC # TF - PdhR: b0113 >b2579(yfiD) Score=5.7 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] AACAATGGTTTTACCAATTGG >b1109(ndh) Score=6.4 Pos=-138 [Escherichia coli str. K-12 substr. MG1655] AATTTTGGTATGACCAATGCA >b0432(cyoA) Score=5.7 Pos=-230 [Escherichia coli str. K-12 substr. MG1655] CACATTGGTTATACCAATTGC >b0113(pdhR) Score=6.7 Pos=-50 [Escherichia coli str. K-12 substr. MG1655] GAAATTGGTAAGACCAATTGA >b2979(glcD) Score=4 Pos=-238 [Escherichia coli str. K-12 substr. MG1655] TGCACAGGTAGGACCAATTTT >b2979(glcD) Score=3.9 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] AAAAATGGTCTGACCGGTAGC >b0154(hemL) Score=3.7 Pos=-214 [Escherichia coli str. K-12 substr. MG1655] CTTATTGGTCATACAAATAAG # TF - Zur: b4046 >b1858(znuC) Score=6.5 Pos=-49 [Escherichia coli str. K-12 substr. MG1655] GAAGTGTGATATTATAACATTTC >b1857(znuA) Score=6.5 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] GAAATGTTATAATATCACACTTC >b0296(rpmE2) Score=5.6 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] TTATGGTTATGTTATAACATAAC >b1973(zinT) Score=6.3 Pos=-56 [Escherichia coli str. K-12 substr. MG1655] TATATGTTACAATATAACATTAC >b1178(pliG) Score=6.3 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] GGATTGTTATATTATAACAGTTC # TF - FabR: b3963 >b2323(fabB) Score=6.4 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] GGCGTACAAGTGTACGCT >b0954(fabA) Score=6.3 Pos=-56 [Escherichia coli str. K-12 substr. MG1655] AGCGTACACGTGTTAGCT >b2899(hyIII) Score=5.1 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] AGCTAACAGGTGTTCACT # TF - NrdR: b0413 >b2234(nrdA) Score=5.7 Pos=-93 [Escherichia coli str. K-12 substr. MG1655] CCCCTATATATAGTGT >b2673(nrdH) Score=4.8 Pos=-120 [Escherichia coli str. K-12 substr. MG1655] TTGCTATATATTGTGT >b2673(nrdH) Score=5.5 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] CAACTACATCTAGTAT >b4238(nrdD) Score=4.3 Pos=-208 [Escherichia coli str. K-12 substr. MG1655] GCACTATATATAGACT >b4238(nrdD) Score=5 Pos=-177 [Escherichia coli str. K-12 substr. MG1655] ACCCAATATGTTGTAT >b2234(nrdA) Score=3.5 Pos=-62 [Escherichia coli str. K-12 substr. MG1655] GTACTACAGGTAGTCT # TF - IclR: b4018 >b4014(aceB) Score=8.3 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] AAAATGGAAATTGTTTTTGATTTT # TF - LacI: b0345 >b0344(lacZ) Score=7.4 Pos=-38 [Escherichia coli str. K-12 substr. MG1655] AATTGTGAGCGGATAACAATT # TF - NanR: b3226 >b4279(yjhB) Score=8.2 Pos=-436 [Escherichia coli str. K-12 substr. MG1655] CTGGTATAACAGGTATAAAGGTA >b4311(nanC) Score=8 Pos=-443 [Escherichia coli str. K-12 substr. MG1655] CTGGTATAACAGGTATAAAGGTG >b3225(nanA) Score=8.2 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] CTGGTATAACAGGTATAAAGGTA # TF - ModE: b0761 >b0781(moaA) Score=6.8 Pos=-199 [Escherichia coli str. K-12 substr. MG1655] CGCTATATACATGATTACATAGCG >b2998(yghW) Score=6.2 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] CGCTATATATGACAATATATAGCG >b0894(dmsA) Score=6.2 Pos=-97 [Escherichia coli str. K-12 substr. MG1655] CGATGTATACAAGCCTATATAGCG >b2208(napF) Score=5.7 Pos=-221 [Escherichia coli str. K-12 substr. MG1655] CGCTATATAAATATATTTATAACC >b0763(modA) Score=6.2 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] CGTTATATTGTCGCCTACATAACG # TF - MprA: b2684 >b0463(acrA) Score=6.4 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] ATTTGTGAATGTATGTACCATA >b2684(mprA) Score=6.9 Pos=-51 [Escherichia coli str. K-12 substr. MG1655] ATTTGTCACTGTCGTTACTATA # TF - RbsR: b3753 >b3748(rbsD) Score=7 Pos=-31 [Escherichia coli str. K-12 substr. MG1655] TCAGCGAAACGTTTCGCTGA # TF - TreR: b4241 >b4240(treB) Score=6.8 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TTTCGGGAACGTTCCCGTTT # TF - MalI: b1620 >b1621(malX) Score=6.7 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] CAGATAAAACGTTTTACCTT >b1621(malX) Score=6.5 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] TTGATAAAACGTTTTATCTT >b1620(malI) Score=7 Pos=-126 [Escherichia coli str. K-12 substr. MG1655] AAGATAAAACGTTTTATCAA >b1620(malI) Score=6.5 Pos=-48 [Escherichia coli str. K-12 substr. MG1655] AAGGTAAAACGTTTTATCTG # TF - GntR: b3438 >b4267(idnD) Score=3.8 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] TAtTtcTACtGaTAAgAaTT >b3415(gntT) Score=5.9 Pos=-178 [Escherichia coli str. K-12 substr. MG1655] AGATGTTACCCGTATCATTC >b3415(gntT) Score=4.9 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] TGACGTTACCCATAACAAAT >b1851(edd) Score=6.3 Pos=-212 [Escherichia coli str. K-12 substr. MG1655] TTATTTTACCGGTAACATGA >b3437(gntK) Score=5.8 Pos=-48 [Escherichia coli str. K-12 substr. MG1655] AACAGTTACCCGTAACATTT >b3437(gntK) Score=6.4 Pos=-61 [Escherichia coli str. K-12 substr. MG1655] CAATGTTACCGATAACAGTT >b4267(idnD) Score=3.8 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] TcAcGTTAtgcGTAACATag >b4268(idnK) Score=5 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] CTATGTTACGCATAACGTGA # TF - RutR: b1013 >b1013(rutR) Score=4.3 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] AGTGGACTAAACGGTCAAAA >b0032(carA) Score=6.5 Pos=-294 [Escherichia coli str. K-12 substr. MG1655] TTTTGACCATTTGGTCCACT >b1012(rutA) Score=6.2 Pos=-126 [Escherichia coli str. K-12 substr. MG1655] TTTTGACCGTTTAGTCCACT # TF - LldR: b3604 >b3603(lldP) Score=5.1 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] AATTGGCAGTGCCACTT >b3603(lldP) Score=6.8 Pos=-215 [Escherichia coli str. K-12 substr. MG1655] AATTGGCCCTACCAATT # TF - TrpR: b4393 >b4393(trpR) Score=5.3 Pos=-66 [Escherichia coli str. K-12 substr. MG1655] CGTACTCTTTAGCGAGTACA >b3161(mtr) Score=5.9 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] TGTACTCGTGTACTGGTACA >b1704(aroH) Score=5.3 Pos=-164 [Escherichia coli str. K-12 substr. MG1655] TGTACTAGAGAACTAGTGCA >b1264(trpE) Score=6.3 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] CGAACTAGTTAACTAGTACG >b0388(aroL) Score=5.6 Pos=-79 [Escherichia coli str. K-12 substr. MG1655] TGTACTAGTTTGATGGTATG # TF - AcrR: b0464 >b0463(acrA) Score=7.9 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] TACATACATTTGTGAATGTATGTA >b0464(acrR) Score=7.3 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] TACATACATTCACAAATGTATGTA # TF - AllR: b0506 >b0505(allA) Score=6.6 Pos=-122 [Escherichia coli str. K-12 substr. MG1655] TTGGAAAAATATTCCAA >b0504(allS) Score=6.6 Pos=-124 [Escherichia coli str. K-12 substr. MG1655] TTGGAATATTTTTCCAA >b0507(gcl) Score=6.7 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] TTGGAAAAATTTTCCAA # TF - MarR: b1530 >b1530(marR) Score=6.3 Pos=-22 [Escherichia coli str. K-12 substr. MG1655] ATTACTTGCCAGGGCAACTAAT >b1530(marR) Score=6.8 Pos=-57 [Escherichia coli str. K-12 substr. MG1655] TATACTTGCCTGGGCAATATTA # TF - MntR: b0817 >b0817(mntR) Score=6.9 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] AGATATAGCACAGGCTATATTA >b2392(mntH) Score=6.9 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] AAACATAGCAAAGGCTATGTTT >b1821(mntP) Score=6.2 Pos=-383 [Escherichia coli str. K-12 substr. MG1655] AGACATAGCTTAGGCTATATTA >b1821(mntP) Score=5.3 Pos=-423 [Escherichia coli str. K-12 substr. MG1655] GAATTTAGCCAAAGCTATGTTT >b0812(dps) Score=5.3 Pos=-67 [Escherichia coli str. K-12 substr. MG1655] ACACATAGCCGGTGCTATACTT # TF - SoxR: b4063 >b4062(soxS) Score=7.4 Pos=-75 [Escherichia coli str. K-12 substr. MG1655] ACCTCAAGTTAACTTGAGGA >b4063(soxR) Score=7.4 Pos=-30 [Escherichia coli str. K-12 substr. MG1655] TCCTCAAGTTAACTTGAGGT # TF - LexA: b4043 >b3813(uvrD) Score=4.9 Pos=-76 [Escherichia coli str. K-12 substr. MG1655] ATCTGTATATATACCCAGCT >b2699(recA) Score=5.7 Pos=-79 [Escherichia coli str. K-12 substr. MG1655] TACTGTATGAGCATACAGTA >b0958(sulA) Score=5.6 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] TACTGTACATCCATACAGTA >b0231(dinB) Score=4.8 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] CACTGTATACTTTACCAGTG >b4043(lexA) Score=5.1 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] TGCTGTATATACTCACAGCA >b4043(lexA) Score=5.2 Pos=-26 [Escherichia coli str. K-12 substr. MG1655] AACTGTATATACACCCAGGG >b0890(ftsK) Score=5 Pos=-96 [Escherichia coli str. K-12 substr. MG1655] TCCTGTTAATCCATACAGCA >b1728(ydjM) Score=4.4 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] CACTGTATAAAAATCCTATA >b1728(ydjM) Score=4.7 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] TACTGTACGTATCGACAGTT >b2616(recN) Score=5.7 Pos=-68 [Escherichia coli str. K-12 substr. MG1655] TACTGTATATAAAACCAGTT >b2616(recN) Score=4.9 Pos=-46 [Escherichia coli str. K-12 substr. MG1655] TACTGTACACAATAACAGTA >b2616(recN) Score=4.7 Pos=-28 [Escherichia coli str. K-12 substr. MG1655] TAATGGTTTTTCATACAGGA >b0779(uvrB) Score=5.6 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] AACTGTTTTTTTATCCAGTA >b1061(dinI) Score=5.6 Pos=-39 [Escherichia coli str. K-12 substr. MG1655] ACCTGTATAAATAACCAGTA >b1861(ruvA) Score=5 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] CGCTGGATATCTATCCAGCA >b1848(yebG) Score=5.3 Pos=-37 [Escherichia coli str. K-12 substr. MG1655] TACTGTATAAAATCACAGTT >b4059(ssb) Score=5.5 Pos=-170 [Escherichia coli str. K-12 substr. MG1655] ACCTGAATGAATATACAGTA >b0799(dinG) Score=4.9 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] TATTGGCTGTTTATACAGTA >b1741(cho) Score=5.1 Pos=-33 [Escherichia coli str. K-12 substr. MG1655] CACTGGATAGATAACCAGCA >b3068(ygjF) Score=4.9 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] TGCTGTTTTTATAAACAATG >b4618(tisB) Score=6.1 Pos=-254 [Escherichia coli str. K-12 substr. MG1655] TACTGTTTATTTATACAGTA >b3645(dinD) Score=5.9 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] AACTGTATATAAATACAGTT >b4613(dinQ) Score=4.3 Pos=-188 [Escherichia coli str. K-12 substr. MG1655] TGCTGGTTTTATAACCTGCA >b4613(dinQ) Score=5.7 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] TACTGTATGATTATCCAGTT >b4347(yjiW) Score=5 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] TACTGATGATATATACAGGT >b4058(uvrA) Score=5.5 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] TACTGTATATTCATTCAGGT >b0060(polB) Score=4.3 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] GACTGTATAAAACCACAGCC >b0685(ybfE) Score=4.5 Pos=-136 [Escherichia coli str. K-12 substr. MG1655] AACTGATTAAAAACCCAGCG >b1183(umuD) Score=6.1 Pos=-39 [Escherichia coli str. K-12 substr. MG1655] TACTGTATATAAAAACAGTA >b2009(sbmC) Score=6.1 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] TACTGTATATAAAAACAGTA >b0221(yafH) Score=4.3 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] AAATGTTTTTACATCCACTA # TF - ArgR: b3237 >b3172(argG) Score=4.1 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] AGCGCATTATTTTACAAA >b3958(argC) Score=5 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] TATGAATAAAAATACACT >b3172(argG) Score=5.2 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] TTTGCATAAAAATTCAGT >b3958(argC) Score=4.1 Pos=-127 [Escherichia coli str. K-12 substr. MG1655] TATCAATATTCATGCAGT >b0864(artP) Score=4 Pos=-5 [Escherichia coli str. K-12 substr. MG1655] TGTCAATGAGTATTCAAT >b0860(artJ) Score=3.8 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] ATTTCATTTAAATTATTT >b0860(artJ) Score=5.4 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] ATTGCATATAAATTCACT >b0864(artP) Score=4.9 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] ATTGCATAATTATTCTGT >b2818(argA) Score=4.5 Pos=-28 [Escherichia coli str. K-12 substr. MG1655] TTCGAATAATCATGCAAA >b2818(argA) Score=4.6 Pos=-49 [Escherichia coli str. K-12 substr. MG1655] ACAGAATAAAAATACACT >b0032(carA) Score=3.9 Pos=-28 [Escherichia coli str. K-12 substr. MG1655] AGTGAGTGAATATTCTCT >b0032(carA) Score=5.2 Pos=-49 [Escherichia coli str. K-12 substr. MG1655] TGTGAATTAATATGCAAA >b3359(argD) Score=4.8 Pos=-69 [Escherichia coli str. K-12 substr. MG1655] AGTGATTTTTTATGCATA >b4254(argF) Score=4.3 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] AATGAATAATCATCCATA >b0273(argF) Score=5.4 Pos=-45 [Escherichia coli str. K-12 substr. MG1655] AGTGAATTTTAATTCAAT >b0273(argF) Score=4.4 Pos=-66 [Escherichia coli str. K-12 substr. MG1655] AATGAATAATTACACATA >b4254(argF) Score=5.5 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] ATTGAATTTTAATTCATT >b3957(argE) Score=4.1 Pos=-44 [Escherichia coli str. K-12 substr. MG1655] ACTGCATGAATATTGATA >b3957(argE) Score=5 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] AGTGTATTTTTATTCATA >b3237(argR) Score=4.9 Pos=-62 [Escherichia coli str. K-12 substr. MG1655] TTTGCATAAAAATTCATC >b2309(hisJ) Score=4.3 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] AATGCATACTTAAGCATT >b2309(hisJ) Score=3.8 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] TAAGCATTTTTAATGAAA >b2309(hisJ) Score=3.7 Pos=-120 [Escherichia coli str. K-12 substr. MG1655] AATGAAAAATAATACGTC >b1748(astC) Score=3.6 Pos=-192 [Escherichia coli str. K-12 substr. MG1655] ATCGCAAACGTATTCACT >b1748(astC) Score=3.7 Pos=-233 [Escherichia coli str. K-12 substr. MG1655] TCTGCATAACATTGCGTT >b1748(astC) Score=4.2 Pos=-181 [Escherichia coli str. K-12 substr. MG1655] ATTCACTTTATATGCACT >b2309(hisJ) Score=4.2 Pos=-151 [Escherichia coli str. K-12 substr. MG1655] GGTGCATTGAAATGCATA >b0709(ybgH) Score=4.8 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] ATTGCATAAATAATCAGA >b0709(ybgH) Score=5.2 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] AATGTATATTTATGCAAT >b3212(gltB) Score=4.4 Pos=-484 [Escherichia coli str. K-12 substr. MG1655] ACTGCATAATCAATCAAA >b3212(gltB) Score=3.8 Pos=-463 [Escherichia coli str. K-12 substr. MG1655] ACCGAAATTTCATGCATA # TF - BirA: b3973 >b0774(bioA) Score=9.4 Pos=-41 [Escherichia coli str. K-12 substr. MG1655] TTGTAAACC---------------GGTTTACAA >b0775(bioB) Score=9.4 Pos=-79 [Escherichia coli str. K-12 substr. MG1655] TTGTAAACC---------------GGTTTACAA >b3827(yigM) Score=6.1 Pos=-81 [Escherichia coli str. K-12 substr. MG1655] TCGTAATCG---------------AGTTGTCAA # TF - KdgR: b1827 >b3526(kdgK) Score=5.3 Pos=-86 [Escherichia coli str. K-12 substr. MG1655] TAATGGAACACTGTTTTAATA >b1702(ppsA) Score=5.3 Pos=-222 [Escherichia coli str. K-12 substr. MG1655] TATGAAAACAGCATTTCATTT >b1703(ppsR) Score=5.3 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] AAATGAAATGCTGTTTTCATA >b2843(kduI) Score=5.4 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] AAACGAAACAGTGTTTCACTA >b2843(kduI) Score=6.3 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] AAATGAAACATTGTTTTATTT >b3909(kdgT) Score=6 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] AAATAAAACAGCGTTTCAATT >b3090(ygjV) Score=5.4 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] ATAAAAAACGGCGTTTCATAA >b1676(pykF) Score=5 Pos=-286 [Escherichia coli str. K-12 substr. MG1655] TTTTGAAACGCTGTTTTTGTT >b1985(yeeO) Score=4.9 Pos=-7 [Escherichia coli str. K-12 substr. MG1655] ATTTGAAATGTGGTTTCACTT >b4252(yjgK) Score=6 Pos=-35 [Escherichia coli str. K-12 substr. MG1655] AAATGAAACGTTGTTTTAATT >b1850(eda) Score=4.5 Pos=-359 [Escherichia coli str. K-12 substr. MG1655] TATTGGACCGGTGTTTCAAAA # TF - NagC: b0676 >b0679(nagE) Score=5.9 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] TTTAATTTGCGATACGAATTAAA >b4311(nanC) Score=4.3 Pos=-608 [Escherichia coli str. K-12 substr. MG1655] AATTATTTATAAAACAAATAGTT >b4311(nanC) Score=4.9 Pos=-715 [Escherichia coli str. K-12 substr. MG1655] CATATTTCATGATGAGAATTATG >b1817(manX) Score=5.2 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] ATTTTTTCGATATCTAAAATAAA >b4312(fimB) Score=4.9 Pos=-763 [Escherichia coli str. K-12 substr. MG1655] CATAATTCTCATCATGAAATATG >b1738(chbB) Score=5.1 Pos=-230 [Escherichia coli str. K-12 substr. MG1655] CTTAATTATCTTCGCGAATTATT >b2943(galP) Score=5.2 Pos=-39 [Escherichia coli str. K-12 substr. MG1655] CTTAATTCACAATAAAAAATAAC >b0678(nagB) Score=5.9 Pos=-209 [Escherichia coli str. K-12 substr. MG1655] TTTAATTCGTATCGCAAATTAAA >b0678(nagB) Score=4.6 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] CTTATTTTATCATTCAAAAAATC >b3730(glmU) Score=4.8 Pos=-233 [Escherichia coli str. K-12 substr. MG1655] GTTTATTCATTGATCGAAATAAG # TF - EbgR: b3075 >b3076(ebgA) Score=6.2 Pos=-94 [Escherichia coli str. K-12 substr. MG1655] CTACTTTTTAGTAAAAATTTT >b3075(ebgR) Score=5.7 Pos=-201 [Escherichia coli str. K-12 substr. MG1655] TAAAATTTTACTAAACTATAG # TF - DgoR: b4479 >b4479(dgoR) Score=4 Pos=-76 [Escherichia coli str. K-12 substr. MG1655] TGGTACTACAA >b4479(dgoR) Score=4.1 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] TTGTACTACAT >b4479(dgoR) Score=5.5 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] TTGTAGTACAA # TF - NhaR: b0020 >b0019(nhaA) Score=5.1 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] TCGTAAAAAACGA # TF - ZntR: b3292 >b3469(zntA) Score=7.7 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] ACTCTGGAGTCGACTCCAGAGT # TF - YiaJ: b3574 >b3575(yiaK) Score=6.4 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] ATTTGAAATCAAGTTTCGCAT >b3574(yiaJ) Score=6.3 Pos=-151 [Escherichia coli str. K-12 substr. MG1655] ATGCGAAACTTGATTTCAAAT # TF - AgaR: b3131 >b3131(agaR) Score=-1.1 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] GAAATGAAACGAAAG >b3132(agaZ) Score=5.4 Pos=-134 [Escherichia coli str. K-12 substr. MG1655] CTTTCATTATGTTTC >b3132(agaZ) Score=5.9 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] CTTTCGTTTTATTTT >b3136(agaS) Score=5.6 Pos=-150 [Escherichia coli str. K-12 substr. MG1655] ATTTCGTTTTATTTC >b3136(agaS) Score=5.1 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] CTTTCAGTTTCTTTT >b3132(agaZ) Score=5.9 Pos=-229 [Escherichia coli str. K-12 substr. MG1655] CTTTCGTTTCATTTC # TF - HexR: b1853 >b1852(zwf) Score=5.4 Pos=-64 [Escherichia coli str. K-12 substr. MG1655] CCGTAAGAAAATTACAA >b1853(hexR) Score=5.4 Pos=-290 [Escherichia coli str. K-12 substr. MG1655] TTGTAATTTTCTTACGG >b0699(ybfA) Score=5.6 Pos=-164 [Escherichia coli str. K-12 substr. MG1655] GTGTAACTTAATTACAG # TF - AbgR: b1339 >b1338(abgA) Score=5.1 Pos=-62 [Escherichia coli str. K-12 substr. MG1655] GATAAGTAAAAACTATC >b1338(abgA) Score=5.6 Pos=-166 [Escherichia coli str. K-12 substr. MG1655] GATAACCGTTATTTATC >b1339(abgR) Score=5.1 Pos=-130 [Escherichia coli str. K-12 substr. MG1655] GATAGTTTTTACTTATC >b1339(abgR) Score=5.6 Pos=-26 [Escherichia coli str. K-12 substr. MG1655] GATAAATAACGGTTATC # TF - ExuR: b3094 >b3092(uxaC) Score=6.2 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] AAATTGGTGTGATAACTTT >b1521(uxaB) Score=4.3 Pos=-33 [Escherichia coli str. K-12 substr. MG1655] CAGGTTGTATGACTAATCA >b3093(exuT) Score=6.2 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] AAAGTTGTATGACAAGTTA >b3094(exuR) Score=6 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] AAAGTGGTATAACAAATAT # TF - UxuR: b4324 >b4324(uxuR) Score=5.4 Pos=-173 [Escherichia coli str. K-12 substr. MG1655] TATTTGGTTGACCAGTTT >b4321(gntP) Score=5.4 Pos=-177 [Escherichia coli str. K-12 substr. MG1655] AAATTGGTTAACCACATC >b4321(gntP) Score=5.6 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] ACAATGGTTGACCAATTT >b1618(uidR) Score=5.8 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] CTATTGGTTAACCAATTT >b4322(uxuA) Score=5.4 Pos=-180 [Escherichia coli str. K-12 substr. MG1655] GATGTGGTTAACCAATTT >b3094(exuR) Score=4.7 Pos=-47 [Escherichia coli str. K-12 substr. MG1655] AAAGTGGTATAACAAATA >b4358(yjjN) Score=3.8 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] GACCTGGTTAATCACATT >b4357(yjjM) Score=3.9 Pos=27 [Escherichia coli str. K-12 substr. MG1655] AATGTGATTAACCAGGTC >b1617(uidA) Score=4.8 Pos=-62 [Escherichia coli str. K-12 substr. MG1655] GAATTGGTTAACTAATCA >b1617(uidA) Score=4.6 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] TTAAAGGTTGACCAGTAT >b2172(yeiQ) Score=4.1 Pos=-176 [Escherichia coli str. K-12 substr. MG1655] AATTTATTATACCAATCT # TF - NarP: b2193 >b2710(norV) Score=4.6 Pos=-118 [Escherichia coli str. K-12 substr. MG1655] TACTCATTAATGGGCA >b1474(fdnG) Score=4.3 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] TACCGCTATTGAGGTA >b4070(nrfA) Score=4.5 Pos=-175 [Escherichia coli str. K-12 substr. MG1655] TAACTCTAAAGTGGTA >b0894(dmsA) Score=3.4 Pos=-180 [Escherichia coli str. K-12 substr. MG1655] TACCGAACAATAATTA >b1222(narX) Score=4 Pos=-228 [Escherichia coli str. K-12 substr. MG1655] TTACCCATAGTGAGTA >b1223(narK) Score=4.1 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] TACCCGGAAAGAGTTA >b2295(yfbV) Score=4.3 Pos=-104 [Escherichia coli str. K-12 substr. MG1655] TACCTGATAGTGGGTA >b1241(adhE) Score=4.7 Pos=-215 [Escherichia coli str. K-12 substr. MG1655] TACCCAGAAGTGAGTA >b0041(fixA) Score=4.6 Pos=-365 [Escherichia coli str. K-12 substr. MG1655] TAACTCATAATGGGTA >b0763(modA) Score=3.9 Pos=-90 [Escherichia coli str. K-12 substr. MG1655] TACCTCACAAAGGTTA >b2193(narP) Score=4 Pos=-91 [Escherichia coli str. K-12 substr. MG1655] TACATAAAATGGGGTA >b2464(talA) Score=4.2 Pos=-22 [Escherichia coli str. K-12 substr. MG1655] TACTTTTCAAGGAGTA >b4123(dcuB) Score=4.9 Pos=-352 [Escherichia coli str. K-12 substr. MG1655] TACCCACAAATGGGTA >b0873(hcp) Score=4.5 Pos=-143 [Escherichia coli str. K-12 substr. MG1655] TACCTCTCTGGCGGTA >b1224(narG) Score=4.3 Pos=-158 [Escherichia coli str. K-12 substr. MG1655] TTATCCTAAAGGGGTA >b1222(narX) Score=3.8 Pos=-118 [Escherichia coli str. K-12 substr. MG1655] TAACTCTTTCCGGGTA >b4154(frdA) Score=4.7 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TACCTATAAAGGAGCA >b3739(atpI) Score=4.6 Pos=-31 [Escherichia coli str. K-12 substr. MG1655] TACCTCGAAGGGAGCA >b1797(yeaR) Score=3.7 Pos=-97 [Escherichia coli str. K-12 substr. MG1655] TAACCAATAAATGGTA >b1587(ynfE) Score=4.7 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] TAACCCAAAATGGGTA >b3210(arcB) Score=4.6 Pos=-112 [Escherichia coli str. K-12 substr. MG1655] TACCTCCAACGGAGTA >b1674(ydhY) Score=4.5 Pos=-163 [Escherichia coli str. K-12 substr. MG1655] TAACCATAAAGGATTA >b4209(dnrN) Score=3.7 Pos=-79 [Escherichia coli str. K-12 substr. MG1655] TGCTACGTAAGGGTTA >b1256(ompW) Score=4.5 Pos=-55 [Escherichia coli str. K-12 substr. MG1655] TACTCCAATGTAGGTA >b2208(napF) Score=4.6 Pos=-129 [Escherichia coli str. K-12 substr. MG1655] TACCCCGATCGGGGTA >b0040(caiT) Score=4.4 Pos=-122 [Escherichia coli str. K-12 substr. MG1655] TACCCATTATGAGTTA >b3365(nirB) Score=5.1 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TACCCATTAAGGAGTA # TF - QorR >b4212(qorR) Score=6.6 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] AAACTTACTTTTAGTAAGTAC >b4211(qorB) Score=6.6 Pos=-67 [Escherichia coli str. K-12 substr. MG1655] GTACTTACTAAAAGTAAGTTT # RNA - FMN >b3041(ribB) Score=123.5 Pos=-105 [Escherichia coli str. K-12 substr. MG1655] CGATTCTGTCGGGCATGGACCCGCTCACGTTATTTTGGCTATATGCCGCCACTCCTAAGACTGCCCTGATTCTGGTAACCATAATTTTAGTGAGGTTTTTTTACCATGAATCAGACGCTACTTTCCTCTTTTGGTACGCCTTTCGAACGT # RNA - TPP >b3994(thiC) Score=75.6 Pos=-182 [Escherichia coli str. K-12 substr. MG1655] TAATTTCTTGTCGGAGTGCCTTAACTGGCTGAGACCGTTTATTCGGGATCCGCGGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGTTAATCTGCT >b0068(thiB) Score=60.9 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] GCCGTTCTCAACGGGGTGCCACGCGTACGCGTGCGCTGAGAAAATACCCGTCGAACCTGATCCGGATAACGCCGGCGAAGGGATTTGAGGCTCCTTCTCAA >b2104(thiM) Score=65.8 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] ACCAAACGACTCGGGGTGCCCTTCTGCGTGAAGGCTGAGAAATACCCGTATCACCTGATCTGGATAATGCCAGCGTAGGGAAGTCACGGACCACCAGG # RNA - Cobalamin >b3966(btuB) Score=86 Pos=-254 [Escherichia coli str. K-12 substr. MG1655] TGTAGCATCCACTTGCCGGTCCTGTGAGTTAATAGGGAATCCAGTGCGAATCTGGAGCTGACGCGCAGCGGTAAGGAAAGGTGCGATGATTGCGTTATGCGGACACTGCCATTCGGTGGGAAGTCATCATCTCTTAGTATCTTAGATACCCCTCCAAGCCCGAAGACCTGCCGGCCAACGTCGCATCTGGTT # TF - GlcC: b2980 >b2980(glcC) Score=4.4 Pos=-148 [Escherichia coli str. K-12 substr. MG1655] TACCGGTCAGACCATTT >b2979(glcD) Score=4.7 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] AAATGGTCTGACCGGTA >b2980(glcC) Score=5.8 Pos=-31 [Escherichia coli str. K-12 substr. MG1655] AATTGGTCCTACCTGTG >b2979(glcD) Score=4 Pos=-236 [Escherichia coli str. K-12 substr. MG1655] CACAGGTAGGACCAATT # RNA - Lysine >b4024(lysC) Score=82.5 Pos=-289 [Escherichia coli str. K-12 substr. MG1655] GCAGGCCAGAAGAGGCGCGTTGCCCAAGTAACGGTGTTGGAGGAGCCAGTCCTGTGATAACACCTGAGGGGGTGCATCGCCGAGGTGATTGAACGGCTGGCCACGTTCATCATCGGCTACAGGGGCTGAATCCCCTGGGTTGTCACCAGAAGCGTTCGCAGTCGGGCGTTTCGCAAGTGGTGGAGCACTTCTGGGTGA # RNA - MOCO_RNA_motif >b0781(moaA) Score=86 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] TAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTG # RNA - Mg_sensor >b4242(mgtA) Score=124.2 Pos=-208 [Escherichia coli str. K-12 substr. MG1655] TTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAA # RNA - yybP-ykoY >b3088(ykoY) Score=67.8 Pos=-212 [Escherichia coli str. K-12 substr. MG1655] TTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCG >b1821(COG1971) Score=68.5 Pos=-230 [Escherichia coli str. K-12 substr. MG1655] CGCCCTCATTTGGGGAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAAT # RNA - mini-ykkC >b4148(ykkC) Score=46.3 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] TTGCAGGACGACCTGCAAACGCCTCTTTTCACCGGGGACGGCCCCAAT # RNA - His_leader >b2019(hisG) Score=129.5 Pos=-169 [Escherichia coli str. K-12 substr. MG1655] CATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTG # RNA - Leu_leader >b0074(leuA) Score=138.5 Pos=-194 [Escherichia coli str. K-12 substr. MG1655] TCTGGAGCTGATTTAATGACTCACATCGTTCGCTTTATCGGTCTACTACTACTAAACGCATCTTCTTTGCGCGGTAGACGAGTGAGCGGCATCCAGCATTAAGCCAGCACGCAGTCAAACAAAAAACCCGCGCCATTGCGCGGGTTTTTTT # RNA - S15 >b3165(rpsO) Score=106.3 Pos=-59 [Escherichia coli str. K-12 substr. MG1655] CTGGGATCGCTGAATTAGAGATCGGCGTCCTTTCATTCTATATACTTTGGAGTTTTAAAATGTCTCTAAGTACTGAAGCAACAGCTAAAATCGTTTCTGAGTTTGGTCGTGACGCA # RNA - Thr_leader >b0002(thrA) Score=118.5 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] GAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCG # RNA - Trp_leader >b1264(trpE) Score=93.4 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] GAAAGGTTGGTGGCGCACTTCCTGAAACGGGCAGTGTATTCACCATGCGTAAAGCAATCAGATACCCAGCCCGCCTAATGAGCGGGCTTTTTTTT # TF - PhnF: b4102 >b4102(phnF) Score=5 Pos=6 [Escherichia coli str. K-12 substr. MG1655] TTGTCTACACAT # TF - Fnr: b1334 >b2503(yfgF) Score=5.4 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] TTGATATATATCAA >b3211(yhcC) Score=4 Pos=-75 [Escherichia coli str. K-12 substr. MG1655] TTGATCCAGGTCAT >b3739(atpI) Score=4.2 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] TTGTTTGAAATCAC >b1222(narX) Score=5.4 Pos=-279 [Escherichia coli str. K-12 substr. MG1655] TTGATGTAAATCAA >b4070(nrfA) Score=4.7 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] TTGATTAAAGACAA >b3518(yhjA) Score=4.7 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] TTGATTCCTATCAA >b0733(cydA) Score=4.6 Pos=-296 [Escherichia coli str. K-12 substr. MG1655] TTGTTCTCGATCAA >b0432(cyoA) Score=3.7 Pos=-241 [Escherichia coli str. K-12 substr. MG1655] TTGTTTTATTTCAC >b3408(feoA) Score=4.4 Pos=-203 [Escherichia coli str. K-12 substr. MG1655] TTGAGCCACATCAA >b1587(ynfE) Score=4.1 Pos=-113 [Escherichia coli str. K-12 substr. MG1655] TTGATATGGATTAA >b0894(dmsA) Score=4.3 Pos=-184 [Escherichia coli str. K-12 substr. MG1655] TTGATACCGAACAA >b0721(sdhC) Score=3.6 Pos=10 [Escherichia coli str. K-12 substr. MG1655] ATGTGAAAAAACAA >b3118(tdcA) Score=4.2 Pos=-183 [Escherichia coli str. K-12 substr. MG1655] TTGACAAAAATCAG >b3493(pitA) Score=3.8 Pos=-116 [Escherichia coli str. K-12 substr. MG1655] TTGAGTGAAATCCA >b3365(nirB) Score=5.4 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] TTGATTTACATCAA >b3092(uxaC) Score=4.2 Pos=-106 [Escherichia coli str. K-12 substr. MG1655] TTGATCTAACTCAC >b4138(dcuA) Score=4.5 Pos=-25 [Escherichia coli str. K-12 substr. MG1655] TTGTTAAAAAACAA >b0781(moaA) Score=4.9 Pos=-263 [Escherichia coli str. K-12 substr. MG1655] ATGATGTATATCAA >b1537(ydeJ) Score=3.5 Pos=-195 [Escherichia coli str. K-12 substr. MG1655] TTGTTATAAGGCAT >b1537(ydeJ) Score=3.5 Pos=7 [Escherichia coli str. K-12 substr. MG1655] TTAATAGAGATAAA >b4125(dcuS) Score=3.6 Pos=-311 [Escherichia coli str. K-12 substr. MG1655] TTGAGATTAAATAA >b0904(focA) Score=4.9 Pos=-74 [Escherichia coli str. K-12 substr. MG1655] ATGATCTATATCAA >b1415(aldA) Score=4.3 Pos=-59 [Escherichia coli str. K-12 substr. MG1655] TTGATGTTAATTAA >b3728(pstS) Score=3.8 Pos=-138 [Escherichia coli str. K-12 substr. MG1655] CTTATTTAAATCAG >b3212(gltB) Score=3.9 Pos=-156 [Escherichia coli str. K-12 substr. MG1655] TTGACCTGTATCAG >b0621(dcuC) Score=4.7 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] TTGATTTTAATCAG >b4039(ubiC) Score=3.4 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] TTGCTTTACATCTC >b2552(hmp) Score=4.8 Pos=-40 [Escherichia coli str. K-12 substr. MG1655] TTGAGATACATCAA >b3942(katG) Score=3.8 Pos=-126 [Escherichia coli str. K-12 substr. MG1655] TTGATCTACATCTC >b1904(yecR) Score=3.7 Pos=-179 [Escherichia coli str. K-12 substr. MG1655] GTGATACAAATCAC >b1222(narX) Score=4.6 Pos=-241 [Escherichia coli str. K-12 substr. MG1655] TTGATATTTATCAT >b1223(narK) Score=4.7 Pos=-111 [Escherichia coli str. K-12 substr. MG1655] ATGATAAATATCAA >b1223(narK) Score=5.4 Pos=-73 [Escherichia coli str. K-12 substr. MG1655] TTGATTTACATCAA >b4123(dcuB) Score=4 Pos=-283 [Escherichia coli str. K-12 substr. MG1655] CCGATAAATATCAA >b0040(caiT) Score=3.7 Pos=-203 [Escherichia coli str. K-12 substr. MG1655] TTAATCAAAATTAA >b0602(ybdN) Score=3.7 Pos=-359 [Escherichia coli str. K-12 substr. MG1655] TTGCTGACAATCAT >b0602(ybdN) Score=4.2 Pos=-150 [Escherichia coli str. K-12 substr. MG1655] TTGATATATAACTA >b1256(ompW) Score=4.1 Pos=-117 [Escherichia coli str. K-12 substr. MG1655] TTAATCCAGATCAA >b1136(icdA) Score=3.6 Pos=-89 [Escherichia coli str. K-12 substr. MG1655] TTGCTCTAAAGCAT >b1674(ydhY) Score=4.7 Pos=-214 [Escherichia coli str. K-12 substr. MG1655] TTGATAACGATCAA >b4330(yjiH) Score=3.9 Pos=-5 [Escherichia coli str. K-12 substr. MG1655] TTGTTATGACACAA >b0619(citA) Score=4.1 Pos=-213 [Escherichia coli str. K-12 substr. MG1655] TTGATTTATTTCAC >b4138(dcuA) Score=4.5 Pos=-25 [Escherichia coli str. K-12 substr. MG1655] TTGTTAAAAAACAA >b1297(puuA) Score=3.3 Pos=-101 [Escherichia coli str. K-12 substr. MG1655] TTAACATTTGACAA >b0114(aceE) Score=4.6 Pos=-131 [Escherichia coli str. K-12 substr. MG1655] ATGTTGTAAATCAA >b1276(acnA) Score=3.7 Pos=-133 [Escherichia coli str. K-12 substr. MG1655] TTGCTTTGCCACAA >b3417(malP) Score=3.7 Pos=-75 [Escherichia coli str. K-12 substr. MG1655] ATGAGGAAGGTCAA >b2163(yeiL) Score=3.8 Pos=-100 [Escherichia coli str. K-12 substr. MG1655] TTGAATCTTAACAA >b3942(katG) Score=4.4 Pos=-141 [Escherichia coli str. K-12 substr. MG1655] TTAATTAAGATCAA >b2580(ung) Score=5.6 Pos=-197 [Escherichia coli str. K-12 substr. MG1655] TTGATTTAAATCAA >b2580(ung) Score=5.1 Pos=-144 [Escherichia coli str. K-12 substr. MG1655] TTGTTTTACATCAA >b1256(ompW) Score=4.8 Pos=-162 [Escherichia coli str. K-12 substr. MG1655] TTGATTTAAATCAC >b3072(aer) Score=4.2 Pos=-100 [Escherichia coli str. K-12 substr. MG1655] GCGATCTAAATCAA >b0824(ybiY) Score=4.4 Pos=-67 [Escherichia coli str. K-12 substr. MG1655] TTGACGCACATCAA >b0618(citC) Score=4.1 Pos=-179 [Escherichia coli str. K-12 substr. MG1655] GTGAAATAAATCAA >b2498(upp) Score=4.6 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] TTGACTAAAGTCAA >b1224(narG) Score=4.7 Pos=-105 [Escherichia coli str. K-12 substr. MG1655] TTGATCGTTATCAA >b2241(glpA) Score=3.6 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] ATGCGCGAAATCAA >b1160(elbA) Score=3.9 Pos=-164 [Escherichia coli str. K-12 substr. MG1655] TTGTTTAACATCCA >b0113(pdhR) Score=4.8 Pos=-115 [Escherichia coli str. K-12 substr. MG1655] ATGATTTCAATCAA >b4238(nrdD) Score=4.8 Pos=-249 [Escherichia coli str. K-12 substr. MG1655] TTGAGCTACATCAA >b0780(ybhK) Score=4.8 Pos=-147 [Escherichia coli str. K-12 substr. MG1655] TTGATATACATCAT >b3417(malP) Score=4 Pos=-340 [Escherichia coli str. K-12 substr. MG1655] ATGATCTTAATAAA >b4062(soxS) Score=3.8 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TCGCTTTACCTCAA >b0034(caiF) Score=3.7 Pos=-53 [Escherichia coli str. K-12 substr. MG1655] TTGCTTCAAAACGA >b1182(hlyE) Score=3.7 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] TTAATAGAAATAAA >b2208(napF) Score=3.2 Pos=-46 [Escherichia coli str. K-12 substr. MG1655] TTGGTCGCTCTCAA >b2029(gnd) Score=3.4 Pos=-375 [Escherichia coli str. K-12 substr. MG1655] ATGGCTTCGATCAA >b1127(pepT) Score=3.7 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] TTTATATTCATTAA >b0897(ycaC) Score=3.9 Pos=-146 [Escherichia coli str. K-12 substr. MG1655] TTGAACTAACACAA >b0897(ycaC) Score=3.8 Pos=22 [Escherichia coli str. K-12 substr. MG1655] TTGATAAAAATGAT >b3476(nikA) Score=4 Pos=-86 [Escherichia coli str. K-12 substr. MG1655] TTGATCCAGAACAG >b1182(hlyE) Score=4.6 Pos=-140 [Escherichia coli str. K-12 substr. MG1655] TTGATATTTATCAT >b2579(yfiD) Score=5.1 Pos=-174 [Escherichia coli str. K-12 substr. MG1655] TTGATGTAAAACAA >b2579(yfiD) Score=5.6 Pos=-121 [Escherichia coli str. K-12 substr. MG1655] TTGATTTAAATCAA >b0733(cydA) Score=5.1 Pos=-348 [Escherichia coli str. K-12 substr. MG1655] TTGATATTTATCAA >b0873(hcp) Score=4.4 Pos=-110 [Escherichia coli str. K-12 substr. MG1655] TTGCGCTAAATCAA >b2481(hyfA) Score=3.8 Pos=-29 [Escherichia coli str. K-12 substr. MG1655] ATGTTTCATATCAT >b1241(adhE) Score=4.3 Pos=-237 [Escherichia coli str. K-12 substr. MG1655] TTGATTTGGATCAC >b1674(ydhY) Score=3.7 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] ATGCTTAATATCAG >b4401(arcA) Score=5.1 Pos=-291 [Escherichia coli str. K-12 substr. MG1655] TTGATATATGTCAA >b4326(yjiD) Score=4.8 Pos=-216 [Escherichia coli str. K-12 substr. MG1655] ATGATTTTTATCAA >b4063(soxR) Score=3.4 Pos=-17 [Escherichia coli str. K-12 substr. MG1655] TTGAGGTAAAGCGA >b1334(fnr) Score=4.7 Pos=-33 [Escherichia coli str. K-12 substr. MG1655] TTGACAAATATCAA >b4326(yjiD) Score=3.7 Pos=-25 [Escherichia coli str. K-12 substr. MG1655] TTGCTAAACGTCAG >b0827(moeA) Score=3.7 Pos=18 [Escherichia coli str. K-12 substr. MG1655] TTGATGTCGCTCGA >b0937(ssuE) Score=3.6 Pos=-278 [Escherichia coli str. K-12 substr. MG1655] GCCATTTAAATCAA >b2499(purM) Score=4.6 Pos=-243 [Escherichia coli str. K-12 substr. MG1655] TTGACTTTAGTCAA >b1109(ndh) Score=5.2 Pos=-150 [Escherichia coli str. K-12 substr. MG1655] TTGATTAACATCAA >b2957(ansB) Score=4.5 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] TTGTTTAACGTCAA >b1474(fdnG) Score=4.4 Pos=-133 [Escherichia coli str. K-12 substr. MG1655] TTGAGGTAGGTCAA >b1761(gdhA) Score=3.9 Pos=-397 [Escherichia coli str. K-12 substr. MG1655] TTGATCCTGATAAA >b0720(gltA) Score=3.6 Pos=-173 [Escherichia coli str. K-12 substr. MG1655] TTATTCGTCATCAA >b3916(pfkA) Score=4 Pos=-125 [Escherichia coli str. K-12 substr. MG1655] CTGACCTGAATCAA >b2296(ackA) Score=4.1 Pos=-92 [Escherichia coli str. K-12 substr. MG1655] ATGATGTTAATCAT >b2288(nuoA) Score=3.7 Pos=-433 [Escherichia coli str. K-12 substr. MG1655] ATGATGTTAAAAAA # TF - GcvA: b2808 >b2905(gcvT) Score=5.1 Pos=-338 [Escherichia coli str. K-12 substr. MG1655] ATTATATTTTCTAAT >b2905(gcvT) Score=5.3 Pos=-370 [Escherichia coli str. K-12 substr. MG1655] TTGAAATAAACTAAT >b2808(gcvA) Score=5.5 Pos=-71 [Escherichia coli str. K-12 substr. MG1655] ATTAAAAAAACTAAT # TF - IdnR: b4264 >b4268(idnK) Score=5.9 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] CTATGTTACGCATAACGTGA >b4267(idnD) Score=5.9 Pos=-117 [Escherichia coli str. K-12 substr. MG1655] TCACGTTATGCGTAACATAG # TF - PaaX: b1399 >b1388(paaA) Score=7.4 Pos=-270 [Escherichia coli str. K-12 substr. MG1655] TGTTTC---------------------------GAATCA >b1387(paaZ) Score=7.4 Pos=-271 [Escherichia coli str. K-12 substr. MG1655] CGATTC---------------------------GAATCA >b1387(paaZ) Score=7.4 Pos=-54 [Escherichia coli str. K-12 substr. MG1655] TGATTC---------------------------GAAACA >b1388(paaA) Score=8 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] TGATTC---------------------------GAATCG # TF - LysR: b2839 >b2839(lysR) Score=5 Pos=-44 [Escherichia coli str. K-12 substr. MG1655] CTATGCAAAAATGATATG >b2838(lysA) Score=5 Pos=-95 [Escherichia coli str. K-12 substr. MG1655] CATATCATTTTTGCATAG # TF - XapR: b2405 >b2407(xapA) Score=5.9 Pos=-107 [Escherichia coli str. K-12 substr. MG1655] TCGATATCGAATCGCTATTGA >b2407(xapA) Score=4.2 Pos=-132 [Escherichia coli str. K-12 substr. MG1655] TTAATAGAGAAAAGATATAAA # TF - RhaS: b3905 >b3904(rhaB) Score=11.1 Pos=-105 [Escherichia coli str. K-12 substr. MG1655] ATCTTTCCCTGGTTGCCA--------------TGTCAGTAACGAGAAGGT >b3907(rhaT) Score=9.3 Pos=-123 [Escherichia coli str. K-12 substr. MG1655] TTAATGCCGTGATTGCCA--------------CGGCAACAGGCGAAAGGT >b3905(rhaS) Score=10.3 Pos=-232 [Escherichia coli str. K-12 substr. MG1655] ACCTTCTCGTTACTGACA--------------TGGCAACCAGGGAAAGAT # TF - RhaR: b3906 >b3905(rhaS) Score=10.9 Pos=-107 [Escherichia coli str. K-12 substr. MG1655] ATCTTGAAAAATCGACG-----------------CGTCGAAAATTTAAGGT # TF - LeuO: b0076 >b0497(rhsD) Score=4.4 Pos=-291 [Escherichia coli str. K-12 substr. MG1655] ATTGATTTTAAATAT >b0497(rhsD) Score=4.2 Pos=-323 [Escherichia coli str. K-12 substr. MG1655] ATTGCTGATATTAAT >b0076(leuO) Score=4.1 Pos=-325 [Escherichia coli str. K-12 substr. MG1655] ATTAATGTTAAGAAT >b2760(casA) Score=4.9 Pos=-268 [Escherichia coli str. K-12 substr. MG1655] ATTCATGGTAATTAT >b2760(casA) Score=4.3 Pos=-298 [Escherichia coli str. K-12 substr. MG1655] ATTCACAGTATGAAT >b0076(leuO) Score=4.9 Pos=-243 [Escherichia coli str. K-12 substr. MG1655] ATTCGCGGTAGTTAT # TF - RcnR: b2105 >b2105(rcnR) Score=5.4 Pos=-83 [Escherichia coli str. K-12 substr. MG1655] TACTCCCCCCCAGTA >b2105(rcnR) Score=5.2 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] TACTACCCCCCAGTA >b2106(rcnA) Score=5.2 Pos=-72 [Escherichia coli str. K-12 substr. MG1655] TACTGGGGGGTAGTA >b2106(rcnA) Score=5.4 Pos=-52 [Escherichia coli str. K-12 substr. MG1655] TACTGGGGGGGAGTA # TF - UlaR: b4191 >b4193(ulaA) Score=5.3 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] TGATTACTTTTGAAAATTAG >b4192(ulaG) Score=5.3 Pos=-292 [Escherichia coli str. K-12 substr. MG1655] CTAATTTTCAAAAGTAATCA >b4192(ulaG) Score=3.9 Pos=-60 [Escherichia coli str. K-12 substr. MG1655] GGATTAATCAAAACCAATCA # TF - SrlR: b2707 >b2702(srlA) Score=9 Pos=-122 [Escherichia coli str. K-12 substr. MG1655] AACTTTCA-------------ATCTTTCA # TF - MetJ: b3938 >b3941(metF) Score=6.4 Pos=-65 [Escherichia coli str. K-12 substr. MG1655] GGACGTCTAAACGGAT >b3829(metE) Score=6.2 Pos=-165 [Escherichia coli str. K-12 substr. MG1655] AAACATCTGGACGGCT >b4013(metA) Score=6.8 Pos=-43 [Escherichia coli str. K-12 substr. MG1655] GGATGTCTAAACGTAT >b3939(metB) Score=6.8 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] AGATGTCCAGATGTAT >b3828(metR) Score=6.2 Pos=-87 [Escherichia coli str. K-12 substr. MG1655] AGCCGTCCAGATGTTT >b0199(metN) Score=6.6 Pos=-98 [Escherichia coli str. K-12 substr. MG1655] AGACGTCTGGATGCCT >b3008(metC) Score=6.6 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] AGACATCCAGACGTAT >b0260(mmuP) Score=6.5 Pos=-34 [Escherichia coli str. K-12 substr. MG1655] GGATGTTTAGATGTCC >b3938(metJ) Score=5.9 Pos=-197 [Escherichia coli str. K-12 substr. MG1655] GGACATCTAAACTTCT >b0605(ahpC) Score=6.2 Pos=-10 [Escherichia coli str. K-12 substr. MG1655] GGAAGTATAGATGTCC >b0599(ybdH) Score=7.4 Pos=-42 [Escherichia coli str. K-12 substr. MG1655] AGACGTTTAGATGTCT >b2153(folE) Score=5.3 Pos=-167 [Escherichia coli str. K-12 substr. MG1655] CGATGTTTTAACATCT >b2942(metK) Score=4.7 Pos=-145 [Escherichia coli str. K-12 substr. MG1655] AGCCATCCAGATGTTA >b0600(mtnE) Score=7.1 Pos=-82 [Escherichia coli str. K-12 substr. MG1655] AGACATCTAAACGTCT >b3966(btuB) Score=5 Pos=-318 [Escherichia coli str. K-12 substr. MG1655] AGATGTCCAGATCTTG # TF - MurR: b2427 >b2427(murR) Score=5.3 Pos=-119 [Escherichia coli str. K-12 substr. MG1655] GGAATCATATATCCC >b2428(murQ) Score=5.3 Pos=-59 [Escherichia coli str. K-12 substr. MG1655] GGGATATATGATTCC # TF - LsrR: b1512 >b1512(lsrR) Score=6.7 Pos=-48 [Escherichia coli str. K-12 substr. MG1655] GAACAATTGCATTAAAGATTTAAATATGTTC >b1512(lsrR) Score=6.6 Pos=-216 [Escherichia coli str. K-12 substr. MG1655] GAACAAATGTATTTCTGCTTTTAATTTGTTC >b1513(lsrA) Score=6.6 Pos=-63 [Escherichia coli str. K-12 substr. MG1655] GAACAAATTAAAAGCAGAAATACATTTGTTC >b1513(lsrA) Score=6.7 Pos=-231 [Escherichia coli str. K-12 substr. MG1655] GAACATATTTAAATCTTTAATGCAATTGTTC # TF - AraC: b0064 >b1901(araF) Score=8.6 Pos=-284 [Escherichia coli str. K-12 substr. MG1655] CAAGGATTTCCAGGCTA----TATGGATTAATCTGCTG >b0063(araB) Score=8 Pos=-99 [Escherichia coli str. K-12 substr. MG1655] TAGCATTTTTATCCATA----TAGCGGATCCTACCTGA >b0063(araB) Score=8.7 Pos=-173 [Escherichia coli str. K-12 substr. MG1655] TAACAAAAGTGTCTATA----CGGCAGAAAAGTCCACA >b4227(ytfQ) Score=7.8 Pos=-188 [Escherichia coli str. K-12 substr. MG1655] GAGCAGGAAAATCCATA----TAGCCGCATTTTTCATA >b1901(araF) Score=7.6 Pos=-209 [Escherichia coli str. K-12 substr. MG1655] TATGTCTTTTCCCGCTA----TATGCACGTTCTCACTG >b0064(araC) Score=8 Pos=-277 [Escherichia coli str. K-12 substr. MG1655] TCAGGTAGGATCCGCTA----TATGGATAAAAATGCTA >b0064(araC) Score=8.7 Pos=-203 [Escherichia coli str. K-12 substr. MG1655] TGTGGACTTTTCTGCCG----TATAGACACTTTTGTTA # TF - YcjW: b1320 >b1317(ycjU) Score=5.5 Pos=-33 [Escherichia coli str. K-12 substr. MG1655] CAATGGGACCGCTACCAAAC >b1309(sucP) Score=6.3 Pos=-29 [Escherichia coli str. K-12 substr. MG1655] TCATGGGACCGCTACCACGG # TF - YihL: b3872 >b3872(yihL) Score=6.6 Pos=-28 [Escherichia coli str. K-12 substr. MG1655] ATCTGGTTTAAACCAAAA # TF - RspR: b1540 >b1581(rspA) Score=5.8 Pos=-70 [Escherichia coli str. K-12 substr. MG1655] TATACTTGTATGGTAGTAGC # TF - YjiR: b4340 >b4341(yjiS) Score=16.8 Pos=-136 [Escherichia coli str. K-12 substr. MG1655] TACAGAT-(17)-TGCAGAT-(13)-GTCTGTA-(23)-ATCTGTA # TF - YdcR: b1439 >b0458(PF10777) Score=6.8 Pos=-103 [Escherichia coli str. K-12 substr. MG1655] AACTGTTATGCAAAA---------ATCTGTTACTTCCCC