# TF - NsrR2: Tbd_2014
>Tbd_2329(hmp) Score=5.7 Pos=-48 [Thiobacillus denitrificans]
CATGCATACGGTATGCATG
# TF - BirA: Tbd_0460
>Tbd_0319(bioB) Score=7.6 Pos=-583 [Thiobacillus denitrificans]
ATGTTCAAT---------------ATTTGACAG
>Tbd_0317(COG1040) Score=7.6 Pos=-25 [Thiobacillus denitrificans]
CTGTCAAAT---------------ATTGAACAT
# TF - NrdR: Tbd_2166
>Tbd_1976(nrdA) Score=4.6 Pos=-88 [Thiobacillus denitrificans]
CCACAAGATGTTGTGA
# TF - IscR: Tbd_1163
>Tbd_2499(ydhD) Score=5.1 Pos=-38 [Thiobacillus denitrificans]
ATTCCCGAGTATTCCACTCAGGTAT
>Tbd_1162(cysE) Score=6.5 Pos=-39 [Thiobacillus denitrificans]
ATAGTTGACTAAAATACTCGGAAAT
>Tbd_1163(iscR) Score=6.2 Pos=-88 [Thiobacillus denitrificans]
ATAGTTGACTAAATTGCTAAGGTAA
>Tbd_1163(iscR) Score=6.5 Pos=-60 [Thiobacillus denitrificans]
ATAGTTGACTGAAATGCTCGGGAAT
# TF - NtrC: Tbd_2500
>Tbd_2503(glnA) Score=4.3 Pos=-188 [Thiobacillus denitrificans]
CGCCCTATAATGGAGCG
>Tbd_2503(glnA) Score=5 Pos=-220 [Thiobacillus denitrificans]
TGCACCAAGACGGGGCA
>Tbd_1701(amtB2) Score=4.3 Pos=-114 [Thiobacillus denitrificans]
CGCACTTCGGCGGTGCA
>Tbd_2310(nasA) Score=4.4 Pos=-138 [Thiobacillus denitrificans]
CGCACCAATTTGCGGCG
# TF - LexA: Tbd_1483
>Tbd_0830(imuA) Score=5.9 Pos=-192 [Thiobacillus denitrificans]
TACTGTATAAATCAACAGTA
>Tbd_1483(lexA) Score=5 Pos=125 [Thiobacillus denitrificans]
TACTGTACGGACATACAGTA
>Tbd_1306(uvrD) Score=6.5 Pos=-19 [Thiobacillus denitrificans]
TACTGTATAAAAATACAGCA
# RNA - TPP
>Tbd_2694(thiC) Score=52.1 Pos=-185 [Thiobacillus denitrificans]
ACCCGCTCGCCAGGGGTCTCCCGCCGGTTTCCGCGGGAGTGAGACATACCCTTCGAACCTGATGCGGTTGAGACCGCCGTAGGGAGGTGGATGCGCCTCGCT
# TF - HrcA: Tbd_2032
>Tbd_0092(groS) Score=6.8 Pos=-102 [Thiobacillus denitrificans]
TCAGCACTCTATGGCGGCGAGTGCTAA
>Tbd_0345(rpoH) Score=7 Pos=-52 [Thiobacillus denitrificans]
TTAGCACTCCCAATGCGCGAGTGCTAA
# TF - CueR: Tbd_2267
>Tbd_2266(copA) Score=6 Pos=-59 [Thiobacillus denitrificans]
ACCTTGCCATGATGGCAAGGT
# TF - MerR: Tbd_1338
>Tbd_1339(merT) Score=6.2 Pos=-52 [Thiobacillus denitrificans]
ACTCCGTACATAACTACGGAAA
# RNA - SAH_riboswitch
>Tbd_2519(ahcY) Score=58.5 Pos=9 [Thiobacillus denitrificans]
CGGTTCCGAGGAGCGCTGCGACGGTTCACCCGCCAGGCTCGGGACGCTTCCTTTCAACGGCGCTCACGTTTT
# TF - MetR: Tbd_2285
>Tbd_2285(metR) Score=5.2 Pos=-23 [Thiobacillus denitrificans]
ATGAATAACACTCAT
>Tbd_2286(metE) Score=5.2 Pos=-98 [Thiobacillus denitrificans]
ATGAGTGTTATTCAT
# TF - YdcR: Tbd_1972
>Tbd_1970(COG1845) Score=6.3 Pos=-88 [Thiobacillus denitrificans]
GTCTGTGCCGGTCGG----------TTCTGTGTCTGCACC