# TF - LiuR: RS03247
>RS05766(paaH) Score=5.2 Pos=-53 [Ralstonia solanacearum GMI1000]
TATGACGTTGACGTAAAC
>RS05766(paaH) Score=5.7 Pos=-47 [Ralstonia solanacearum GMI1000]
GTTGACGTAAACGTCAAT
>RS00697(serA) Score=6 Pos=-34 [Ralstonia solanacearum GMI1000]
CTTGACGTATACGTCAAC
>RS00669(mcm) Score=6.6 Pos=-113 [Ralstonia solanacearum GMI1000]
GTTGACGTTTACGTAAAC
>RS03248(RSc0281) Score=6.3 Pos=-77 [Ralstonia solanacearum GMI1000]
ATTGACGTTTACGTTAGC
>RS03248(RSc0281) Score=4.9 Pos=-71 [Ralstonia solanacearum GMI1000]
GTTTACGTTAGCGTCAAA
>RS03247(liuR) Score=4.8 Pos=-101 [Ralstonia solanacearum GMI1000]
GCTAACGTAAACGTCAAT
>RS03247(liuR) Score=6.1 Pos=-107 [Ralstonia solanacearum GMI1000]
TTTGACGCTAACGTAAAC
>RS03246(liuA) Score=5.3 Pos=-131 [Ralstonia solanacearum GMI1000]
GTTTACGTAAACGTCAAT
>RS03246(liuA) Score=6.6 Pos=-137 [Ralstonia solanacearum GMI1000]
GTTGACGTTTACGTAAAC
# TF - NrdR: RS05125
>RSc2805(nrdA) Score=3.7 Pos=-220 [Ralstonia solanacearum GMI1000]
CCACTATACTTAGTGC
>RSc2805(nrdA) Score=5.3 Pos=-189 [Ralstonia solanacearum GMI1000]
ACACTAGATATAGTGG
>RSp0963(nrdD) Score=4.6 Pos=-50 [Ralstonia solanacearum GMI1000]
CCACAACATCTAGTGC
>RSp0963(nrdD) Score=3.9 Pos=-19 [Ralstonia solanacearum GMI1000]
CCACTATATGGAGTAC
# TF - NorR: RS02290
>RS02290(norR) Score=4 Pos=-36 [Ralstonia solanacearum GMI1000]
CAAGGTTCTTTTCACCCTC
>RS02290(norR) Score=4.7 Pos=-62 [Ralstonia solanacearum GMI1000]
CTGGGTAAAATCGACCGCA
>RS02289(norA) Score=4.7 Pos=-122 [Ralstonia solanacearum GMI1000]
TGCGGTCGATTTTACCCAG
>RS02289(norA) Score=4 Pos=-148 [Ralstonia solanacearum GMI1000]
GAGGGTGAAAAGAACCTTG
>RS02289(norA) Score=4.2 Pos=-168 [Ralstonia solanacearum GMI1000]
CATGGTTGGAATTACCTGA
# TF - PsrA: RS04928
>RS04928(psrA) Score=4.6 Pos=-122 [Ralstonia solanacearum GMI1000]
TTTAAAACATCCGTTCCTAA
# TF - FadP: RS04423
>RS04423(fadP) Score=5.7 Pos=-136 [Ralstonia solanacearum GMI1000]
TTGAACGATCGTTCGA
>RSc0923(etfB) Score=5.2 Pos=-95 [Ralstonia solanacearum GMI1000]
TAGCACGACCGTTCGT
>RSc1567(etfD) Score=5.6 Pos=-120 [Ralstonia solanacearum GMI1000]
TCGAACGACCGTTCAA
>RSc0780(fadD2) Score=5.3 Pos=-58 [Ralstonia solanacearum GMI1000]
TAGAACGATCGTTCAG
>RS02959(RSc1772) Score=5 Pos=41 [Ralstonia solanacearum GMI1000]
AAGAACGATCGTTCAG
>RS02946(fadB) Score=5.5 Pos=-101 [Ralstonia solanacearum GMI1000]
TTGAACGACCGTGCTA
>RSc2013(paaH1) Score=4.9 Pos=-49 [Ralstonia solanacearum GMI1000]
TCGCACGCTCGTGCTA
>RSc2857(fadD1) Score=5.2 Pos=-47 [Ralstonia solanacearum GMI1000]
TCGAACGACCATTCGA
>RS03611(RSc2046) Score=5.5 Pos=-63 [Ralstonia solanacearum GMI1000]
TAGCACGACCGTTCAA
>RSc1637(bktB) Score=4.8 Pos=-59 [Ralstonia solanacearum GMI1000]
TCGAACGATCGTTTGC
>RSc1749(alkK) Score=4.6 Pos=-42 [Ralstonia solanacearum GMI1000]
TAGAACGGTTGTTCAG
# TF - LexA: RSc1304
>RS01909(imuA) Score=6.2 Pos=-159 [Ralstonia solanacearum GMI1000]
TACTGTATATCCATACAGTA
>RSc0551(recA) Score=5.5 Pos=-180 [Ralstonia solanacearum GMI1000]
CACTGGTTTTTTATACAGTA
>RSc1304(lexA) Score=5.4 Pos=-25 [Ralstonia solanacearum GMI1000]
ACCTGTTCAAATATACAGTG
>RSc1304(lexA) Score=5.3 Pos=-44 [Ralstonia solanacearum GMI1000]
CACTGTATAAAATCACAGCA
>RS05321(uvrD) Score=6 Pos=-39 [Ralstonia solanacearum GMI1000]
TGCTGTATATTTATACAGTT
>RS00884(BPSS1334) Score=5.2 Pos=-29 [Ralstonia solanacearum GMI1000]
CAGTGTACGTATATACAGTC
>RS00884(BPSS1334) Score=5.9 Pos=-44 [Ralstonia solanacearum GMI1000]
GCCTGTATATATTTACAGTG
# TF - Fur: RSp0247, RSc2747
>RSc1963(tonB) Score=5 Pos=-287 [Ralstonia solanacearum GMI1000]
AATGGGAATCATTATCGTT
>RSc1966(hemP) Score=5.5 Pos=-82 [Ralstonia solanacearum GMI1000]
AATGATAACGATTCTCATT
>RS03722(RSp0244) Score=5.5 Pos=-223 [Ralstonia solanacearum GMI1000]
ATTGATAATGATTCTTATT
>RS03722(RSp0244) Score=4.1 Pos=-217 [Ralstonia solanacearum GMI1000]
AATGATTCTTATTTGCATT
>RS00511(RSc3067) Score=5.3 Pos=-81 [Ralstonia solanacearum GMI1000]
AACGAGAATCATTCTCATT
>RS03714(RSp0252) Score=4.9 Pos=-66 [Ralstonia solanacearum GMI1000]
AATGAAAACGATTCGCATT
>RSc0349(bfd) Score=5 Pos=-77 [Ralstonia solanacearum GMI1000]
AACAAGAATTGTTCTCATT
>RS02469(RSp1062) Score=5.1 Pos=-153 [Ralstonia solanacearum GMI1000]
AATGGGAATTGTTCTCATT
>RS00872(RSp0415) Score=5.6 Pos=-237 [Ralstonia solanacearum GMI1000]
AATGAGAATTATTCTCAAT
>RS00872(RSp0415) Score=5 Pos=-53 [Ralstonia solanacearum GMI1000]
AATGAGAATCATTCTTGAT
>RS02198(RSp1640) Score=5.2 Pos=-48 [Ralstonia solanacearum GMI1000]
AATGAGAATCATTATCATC
>RS00871(RSp0414) Score=5 Pos=-254 [Ralstonia solanacearum GMI1000]
ATCAAGAATGATTCTCATT
>RS00871(RSp0414) Score=5.6 Pos=-70 [Ralstonia solanacearum GMI1000]
ATTGAGAATAATTCTCATT
>RS04230(RSc1807) Score=5.6 Pos=-126 [Ralstonia solanacearum GMI1000]
AATGAGAATGATTATCAAT
>RS00176(RSc2918) Score=5.4 Pos=-56 [Ralstonia solanacearum GMI1000]
AATAAGAATTCTTCTCATT
>RS04237(RSc1811) Score=5 Pos=-33 [Ralstonia solanacearum GMI1000]
AATGAGAATCATTTTCATC
>RS03023(RSp0100) Score=4.6 Pos=-59 [Ralstonia solanacearum GMI1000]
AGTGATAATCACTCTCATT
# TF - Zur: RSc0048
>RS00125(omr2) Score=6.1 Pos=-114 [Ralstonia solanacearum GMI1000]
TATTTGCAACAGAGTTGCAAATT
>RS04852(RSc0594) Score=5.7 Pos=-95 [Ralstonia solanacearum GMI1000]
AATTCGCAACTTAGTTGCATTGG
>RSc1963(tonB) Score=6 Pos=-220 [Ralstonia solanacearum GMI1000]
TTGTCGCAACACTGTTGCATGAA
>RS01372(zip) Score=5.9 Pos=-37 [Ralstonia solanacearum GMI1000]
TTCTTGCAACTCTGTTGCGTTTG
# TF - ModE: RS05434
>RSp0106(modA) Score=4.8 Pos=-57 [Ralstonia solanacearum GMI1000]
GGCGTTATATCGGCCCGTATATTACGAT
# TF - Dnr: RS02297
>RS03038(RSp1503) Score=4.4 Pos=-42 [Ralstonia solanacearum GMI1000]
GTTTGCGCTGTGTCAAAG
>RSp1368(nosZ) Score=4.7 Pos=-126 [Ralstonia solanacearum GMI1000]
GTGTGACGAAAGTCAATT
# TF - HexR: RSp1556
>RSp1560(edd) Score=5.5 Pos=-220 [Ralstonia solanacearum GMI1000]
TTGTAGTATTACTACAT
>RSp1560(edd) Score=4.6 Pos=-42 [Ralstonia solanacearum GMI1000]
TTGTAGGAAAATTACAT
>RSp1559(zwf) Score=4.6 Pos=-338 [Ralstonia solanacearum GMI1000]
ATGTAATTTTCCTACAA
>RSp1559(zwf) Score=5.5 Pos=-160 [Ralstonia solanacearum GMI1000]
ATGTAGTAATACTACAA
# TF - IscR: RS04257
>RS04257(iscR) Score=6.5 Pos=-36 [Ralstonia solanacearum GMI1000]
ATACTTGAGCAAAACGATCAGGTAT
>RS04257(iscR) Score=6.3 Pos=-65 [Ralstonia solanacearum GMI1000]
TTAGTTGACTGATTTTGTCGGGTTC
# TF - SdhR: RS03565
>RSc2490(icd) Score=5.5 Pos=-168 [Ralstonia solanacearum GMI1000]
TCTTGTGTCTTATATAAGAGTTGCGG
>RSc1358(aceA) Score=6.2 Pos=-104 [Ralstonia solanacearum GMI1000]
TCTACACTCTTATATAAGACATATGA
>RSc1998(mdh) Score=7.7 Pos=-296 [Ralstonia solanacearum GMI1000]
TCTTATGTCTTATATAAGACAGAAGA
>RS03565(sdhR) Score=7.7 Pos=-62 [Ralstonia solanacearum GMI1000]
TCTTCTGTCTTATATAAGACATAAGA
# RNA - FMN
>RSp1191(ribB) Score=96.1 Pos=-170 [Ralstonia solanacearum GMI1000]
GCGGAACGATGCGCGCCCGCGCCGCGGGTGCGGCCTGCCTTGCGCCGGCCGCGCCTTCGCGCGGCGCGGGCGCGCGCTTCCGCGTGCCCTGGAACGTCTTGTCGCCCATTTCAGCGAGGAGCGTTTCCATGTTGTCCACACAGCCATCCCACGCAGTG
# RNA - TPP
>RSc0113(thiC) Score=59.8 Pos=-196 [Ralstonia solanacearum GMI1000]
TTGGATGAAACAGGGGTGCCGTGCGGATGGGCCGCGCGGCTGAGAGAGTCCCTTCGCACCCGATCCGGTTCGTACCGGCGTGGGAAGTTTCTTCAGAACACCG
# RNA - Cobalamin
>RS02718(btuB) Score=49 Pos=-396 [Ralstonia solanacearum GMI1000]
GTTACACTCGCCGCGTCCTGGTGCCCGCAGAGCCGATCTGCAGTTAAACGGGAAGCAGGGAGCGGCCGCCCCAAACGGTGCGCCAACCTGCGCTGCCCCCGCAACGGTAAGCGAACGCCGTCGAAGGCCGCGCTACCTCTGGCCAGAAGAGGGCGCGGCGTCGCGCAGGTCCGTCCACATGCCACTGTTCCGCGGAACGGGAAGGCGGCCGGACCCGGTTCGCCAGCCCGGATACCGGCCAGGACAGTGGGTTTCAGA
>RSp0628(hoxN) Score=121.5 Pos=-278 [Ralstonia solanacearum GMI1000]
CATCCCGCCTCACGATGATGGTGCCCTTCCAGGGTGAAACGGGAACGCGGTGCGATGCCGCGGCTGCCCCCGCAACTGTAAGCGACGAGTCTGCGCCAACCAGCCACCGCACGATGCCGGGAAGGCGGCGCCAGGCGATGACGCGCGAGCCAGGAGACCGGCCATCTCCTTCTGTCGACGT
# TF - NsrR: RS01705
>RS01706(hmp) Score=4.3 Pos=-133 [Ralstonia solanacearum GMI1000]
GTGGTATTTAATATGCATG
>RS03037(PF10006) Score=3.7 Pos=-103 [Ralstonia solanacearum GMI1000]
CAAGTATCTGATATACATC
>RS03037(PF10006) Score=5.8 Pos=-53 [Ralstonia solanacearum GMI1000]
GATGCATTCTCAATGCATC
>RS03038(nirK) Score=5.8 Pos=-203 [Ralstonia solanacearum GMI1000]
GATGCATTGAGAATGCATC
>RS03038(nirK) Score=3.7 Pos=-153 [Ralstonia solanacearum GMI1000]
GATGTATATCAGATACTTG
>RS01705(nsrR) Score=4.3 Pos=-134 [Ralstonia solanacearum GMI1000]
CATGCATATTAAATACCAC
# TF - NtrC: RSc1261
>RSc2870(dppA) Score=4.6 Pos=-193 [Ralstonia solanacearum GMI1000]
TGCACCAATTTGTGGCG
>RS03167(narK) Score=4.8 Pos=-258 [Ralstonia solanacearum GMI1000]
TGCACCGAAACCGTGCA
>RSc1258(glnA) Score=5.1 Pos=-334 [Ralstonia solanacearum GMI1000]
CGCACTATGATGGTGCG
# TF - RbsR: RS04266
>RS04260(rbsB) Score=6.7 Pos=-108 [Ralstonia solanacearum GMI1000]
ATACGCAAACGTTTGCGAGC
# RNA - Glycine
>RSc3293(gcvT) Score=40.7 Pos=-363 [Ralstonia solanacearum GMI1000]
CCATCCATCCGGGAGAGCGCGTCGGCCGCATACGGCCAGTCGCCGCCGAAGGGGTAGCACCCGAAAACTCTCAGGCATCCAGGACCGGGTGGATCGGCT
>RSc3293(gcvT) Score=32.8 Pos=-252 [Ralstonia solanacearum GMI1000]
GGCCGCACTCTGGAGAGCGGCGCCGCGTCACCATCGCGGGCGCCCACCGAAGGGGCTCACGGAACCGTCGCACGCGTTGTGTCGCTTCCCAATCTCTCAGGTACCAAGGACAGAGGGGCCACCCG
# RNA - SAH_riboswitch
>RSc0093(ahcY) Score=59.4 Pos=-200 [Ralstonia solanacearum GMI1000]
CCATTCCGAGGAGCGTTGCAACGGACCGGCATCCGCCCGGCCGCCAGGCTCGGAAGTTCAAACGGCGCTCGCACTAT
# RNA - yybP-ykoY
>RS04438(ykoY) Score=74.5 Pos=-215 [Ralstonia solanacearum GMI1000]
CGACTTCCTCAAAGGGGAGTAGCTCGGGGGTTCTTCAGCCCCAGGCACGATCGTCATGACGAAGCGCACGCTTCCGGTCGTGCCGGCATCCGCAGGTTCCTGGCCTGCCGGTGTCGAGCAAGACCTTTGCAACCGGA
# RNA - sucA
>RSc1269(sucA) Score=77.8 Pos=-86 [Ralstonia solanacearum GMI1000]
TGCGATCCGCTAACCGGTCAAGCCGTGTCGCGGAAGGTTGATGAACCCGCTGAACTCCGGCAGACCCGGAGAAAGGTGAGCGCC
# TF - PaaR: RS03754
>RSp0604(paaA) Score=6.3 Pos=-97 [Ralstonia solanacearum GMI1000]
ATTGACCGACCGGTCGGACGAT
>RSc2872(paaF2) Score=6.5 Pos=-53 [Ralstonia solanacearum GMI1000]
ATTAACCGACCGGTTGGTCGGC
>RSc2873(paaF) Score=6.2 Pos=-48 [Ralstonia solanacearum GMI1000]
GCCGACCAACCGGTCGGTTAAT
# TF - HrcA: RSc2649
>RSc0641(groS) Score=7.2 Pos=-117 [Ralstonia solanacearum GMI1000]
TTGGCACTCGCCTGGAGGGAGTGCTAA
>RSc0374(rpoH) Score=7.4 Pos=-70 [Ralstonia solanacearum GMI1000]
TTAGCACTCATCCAGCCGGAGTGCTAA
# TF - CueR: RS02622
>RS02623(copA) Score=5.3 Pos=-61 [Ralstonia solanacearum GMI1000]
ACCTTCCTAATATGGGAAGGT
>RS02624(copZ) Score=4.9 Pos=-69 [Ralstonia solanacearum GMI1000]
CGTTTCCCATGGTGGGAAGGT
# TF - CadR-PbrR: RS05447
>RS05448(cadA) Score=5.6 Pos=-57 [Ralstonia solanacearum GMI1000]
ACCCTGGAGTTCCTTCAGGGT
# TF - FruR2: RSc2860
>RSc2861(fruB) Score=6.2 Pos=-83 [Ralstonia solanacearum GMI1000]
CAATGTAATCGATTTCAATC
>RSc2861(fruB) Score=5.4 Pos=-226 [Ralstonia solanacearum GMI1000]
CGCTGAAATCGTTTCCAAAG
>RSc2860(fruR2) Score=5.4 Pos=-20 [Ralstonia solanacearum GMI1000]
CTTTGGAAACGATTTCAGCG
>RSc2860(fruR2) Score=6.2 Pos=-163 [Ralstonia solanacearum GMI1000]
GATTGAAATCGATTACATTG
# TF - RSc1790: RS04189
>RS04189(RSc1790) Score=6.1 Pos=-38 [Ralstonia solanacearum GMI1000]
CGATGTAAACGTTTACAAGC
# TF - ScrR: RSp1286
>RSp1285(scrA) Score=6.7 Pos=-45 [Ralstonia solanacearum GMI1000]
ATGTGGTATCGATACCATGT
>RSp1286(scrR) Score=6.3 Pos=7 [Ralstonia solanacearum GMI1000]
GCATGGTATCGATCCCACAA
# TF - HutC: RSc2648
>RSc2647(hutU) Score=5.8 Pos=-53 [Ralstonia solanacearum GMI1000]
TTATTTGTATATACAACATA
>RSc2648(hutC) Score=5.8 Pos=-99 [Ralstonia solanacearum GMI1000]
TATGTTGTATATACAAATAA
# TF - UraR: RS01487
>RS01488(pucM) Score=4 Pos=-317 [Ralstonia solanacearum GMI1000]
CCTGTTGACAAT
>RS01488(pucM) Score=5.2 Pos=-285 [Ralstonia solanacearum GMI1000]
ATTGTCAACAAA
>RS01487(uraR) Score=5.2 Pos=-93 [Ralstonia solanacearum GMI1000]
TTTGTTGACAAT
>RS01487(uraR) Score=4 Pos=-61 [Ralstonia solanacearum GMI1000]
ATTGTCAACAGG
# TF - UreR: RS01502
>RS01502(ureR) Score=4.9 Pos=-41 [Ralstonia solanacearum GMI1000]
ACCGGTCAGACCACG
# TF - MetR: RSp0677
>RSp0677(metR) Score=5.5 Pos=-38 [Ralstonia solanacearum GMI1000]
GTTGAATTGAATTCATA
>RSp0676(metE) Score=5.5 Pos=-94 [Ralstonia solanacearum GMI1000]
TATGAATTCAATTCAAC
# TF - GabR: RS01853
>RSc0029(gabT) Score=13.1 Pos=-97 [Ralstonia solanacearum GMI1000]
ATTGGCTC-(15)-ATTGGGTC-(10)-GGGCCAAT
>RS02922(gbtA) Score=12.4 Pos=-131 [Ralstonia solanacearum GMI1000]
AATGGCTC-(15)-ATTGGGTC-(8)-AAGACCAT
# TF - ModE3: RS03657
>RS03658(tupB) Score=5.2 Pos=-50 [Ralstonia solanacearum GMI1000]
TCATGCAGCATCCGACATAA
>RS03657(modE3) Score=5.2 Pos=-109 [Ralstonia solanacearum GMI1000]
TTATGTCGGATGCTGCATGA
# TF - OapR: RS02394
>RS02393(oapT) Score=14.4 Pos=-114 [Ralstonia solanacearum GMI1000]
ACCTATACAGTT-(15)-ATCTGTGCATGT-(15)-CTCTGTACAGTT
# TF - H16_A2655: RS04303
>RS04304(h16_A2657) Score=15 Pos=-101 [Ralstonia solanacearum GMI1000]
AAACTGTACAG-(13)-AAAGTGTACAG-(0)-GTACTGTACAG
# TF - PdxW: RS00574
>RS00575(pdxO) Score=10.5 Pos=-96 [Ralstonia solanacearum GMI1000]
TGTGGCTCCAT-(13)-TGTGGGTCTAC-(2)-ATGGTGCCATG
# TF - H16_A0970: RS04846
>RS04847(RSc0598) Score=20.5 Pos=-137 [Ralstonia solanacearum GMI1000]
ACAGATACAGACGG-(11)-ACCGTAACAGATGA-(10)-TGCCCTGCTCTGGT-(10)-ACGTCTGTGTCTGT
# TF - YrdX3: RS03409
>RSc1858(cyoA2) Score=14.8 Pos=-192 [Ralstonia solanacearum GMI1000]
GTTGTATGGTC-(21)-CTTGTATGGGT-(37)-ATCCATACATC
# TF - GguR: RS04109
>RSc1079(gudD) Score=5.1 Pos=-26 [Ralstonia solanacearum GMI1000]
ATGTTGTACGACGACTG
>RS04109(gguR) Score=5.1 Pos=-90 [Ralstonia solanacearum GMI1000]
CAGTCGTCGTACAACAT
# TF - GulR: RS05372
>RS05369(kdgD) Score=6.4 Pos=-109 [Ralstonia solanacearum GMI1000]
ATCGATTCAAAAAATGAATTGAT
>RS05371(uxuL2) Score=6.1 Pos=-111 [Ralstonia solanacearum GMI1000]
ATCGATTCAAAACGTATATCGAT