# TF - NsrR2: NE0928
>NE0927(nirK) Score=3.1 Pos=-94 [Nitrosomonas europaea ATCC 19718]
GATATATTAATAATATATC
>NE0927(nirK) Score=4 Pos=-1 [Nitrosomonas europaea ATCC 19718]
GATGTATCTAATATACACC
>NE0928(nsrR) Score=4 Pos=-218 [Nitrosomonas europaea ATCC 19718]
GGTGTATATTAGATACATC
>NE0928(nsrR) Score=3.1 Pos=-125 [Nitrosomonas europaea ATCC 19718]
GATATATTATTAATATATC
# TF - BirA: NE2460
>NE2300(bioB) Score=7.6 Pos=-96 [Nitrosomonas europaea ATCC 19718]
CTGTTTAAT--------------AATTGACAA
# TF - NrdR: NE1432
>NE2423(nrdA) Score=5.7 Pos=-116 [Nitrosomonas europaea ATCC 19718]
ACACAATATATTGTGT
# TF - Zur: NE1722
>NE1721(omr2) Score=6.4 Pos=-193 [Nitrosomonas europaea ATCC 19718]
TAATTGCAACAATGTTGCGGCTA
>NE1721(omr2) Score=6.6 Pos=-233 [Nitrosomonas europaea ATCC 19718]
TAATTGCAACATAGTTGCGTTTT
# TF - IscR: NE1452
>NE1452(iscR) Score=6.7 Pos=-100 [Nitrosomonas europaea ATCC 19718]
ATAGTTGACTAATATTGTCGGGTAT
# TF - GlcC
>NE0674(glcE) Score=3.6 Pos=-118 [Nitrosomonas europaea ATCC 19718]
ACTGCTCAATCCAGG
# RNA - TPP
>NE0038(thiC) Score=51.7 Pos=-138 [Nitrosomonas europaea ATCC 19718]
GCTGTGGCTAGGGGTCCGCATTTGCAGTTTTCTGCAAATGCCGGTGAGAGAGTCCCTTAATACCTGATGCGGATAACGCCGCCGGAGGGAAGCCAGGAGTCACTCTCCT
# TF - HrcA: NE1477
>NE0027(groS) Score=7.4 Pos=-128 [Nitrosomonas europaea ATCC 19718]
TTAGCACTCGTTGCTGTTGAGTGCTAA
>NE0584(rpoH) Score=7 Pos=-85 [Nitrosomonas europaea ATCC 19718]
TTAGCACTCATGAACTAAGAGTGCTAG
# TF - MerR: NE0843
>NE0842(merT) Score=6.1 Pos=-63 [Nitrosomonas europaea ATCC 19718]
ACTCCGTACATGACTACGGAAG
# RNA - SAH_riboswitch
>NE0660(ahcY) Score=46.2 Pos=-93 [Nitrosomonas europaea ATCC 19718]
GGTACCGAGGAGCGCTGCAGCGGTCAATTCCGTGAGGCTCGTACCAATGGACAACCCAACAACGGCGCTCTTTCACTTT
# TF - MetR: NE1435
>NE1435(metR) Score=5.4 Pos=-17 [Nitrosomonas europaea ATCC 19718]
ATGAATAATTTTCAT
>NE1436(metE) Score=5.4 Pos=-98 [Nitrosomonas europaea ATCC 19718]
ATGAAAATTATTCAT