# TF - NsrR: BMA0606, BMA1378
>BMA0630(nnrS) Score=4.6 Pos=-39 [Burkholderia mallei ATCC 23344]
CATGCATCAAGAAAGCAAC
>BMA0633(norB) Score=4.6 Pos=-93 [Burkholderia mallei ATCC 23344]
CATACATTCTTTGTACATG
>BMA2417(hmp) Score=4.4 Pos=-39 [Burkholderia mallei ATCC 23344]
GATGTATCGTTTGCGAATG
>BMA0614(nnrS) Score=5 Pos=-12 [Burkholderia mallei ATCC 23344]
GATACATAATAAATGCATC
# TF - HexR: BMA2447
>BMA2447(hexR) Score=6 Pos=-69 [Burkholderia mallei ATCC 23344]
TTGTAGATTTTCTACAA
>BMA2447(hexR) Score=5.5 Pos=-212 [Burkholderia mallei ATCC 23344]
TAGTAGAAAAACTACAT
>BMA2446(edd) Score=6 Pos=-245 [Burkholderia mallei ATCC 23344]
TTGTAGAAAATCTACAA
>BMA2446(edd) Score=5.5 Pos=-102 [Burkholderia mallei ATCC 23344]
ATGTAGTTTTTCTACTA
>BMA2130(zwf) Score=5.7 Pos=-85 [Burkholderia mallei ATCC 23344]
TTGTAGTTAAACTACAA
# TF - NrdR: BMA2074
>BMA0629(nrdD) Score=3.5 Pos=-80 [Burkholderia mallei ATCC 23344]
ATACAACATCTGGTAT
>BMA2510(nrdA) Score=5.3 Pos=-340 [Burkholderia mallei ATCC 23344]
CCACTATACTTTGGGC
>BMA2510(nrdA) Score=5.5 Pos=-309 [Burkholderia mallei ATCC 23344]
GCACTACATATAGTGT
>BMA0629(nrdD) Score=5.2 Pos=-49 [Burkholderia mallei ATCC 23344]
TCACCAGATTTTGTGC
# TF - Zur: BMA0329
>BMA0329(zur) Score=6 Pos=9 [Burkholderia mallei ATCC 23344]
GCGCGGATACGTTATATCATCAC
>BMA2036(omr1) Score=5.8 Pos=-301 [Burkholderia mallei ATCC 23344]
CGGATGATATGTTATATCATCGT
>BMAA0251(omr) Score=6.1 Pos=-87 [Burkholderia mallei ATCC 23344]
ATATTGATACGTTATATCGTTTC
>BMAA0251(omr) Score=4.8 Pos=-199 [Burkholderia mallei ATCC 23344]
GAAATGATATAACATATCGATAC
# TF - LldR: BMAA1432
>BMAA1431(lldE) Score=4 Pos=-141 [Burkholderia mallei ATCC 23344]
GCGTGGTCAGACCAACT
>BMAA1432(lldR) Score=4.3 Pos=-277 [Burkholderia mallei ATCC 23344]
AGTTGGTCTGACCACGC
# TF - HutC: BMA0646
>BMAA0417(COG1457 (CodB)) Score=5.1 Pos=-71 [Burkholderia mallei ATCC 23344]
ACAGTTGTCTATACAATTTT
>BMAA1240(hisQ) Score=5.1 Pos=-140 [Burkholderia mallei ATCC 23344]
AAAGTTGTACATACAACTTC
>BMA1774(hisT) Score=5.9 Pos=-79 [Burkholderia mallei ATCC 23344]
CAAGTTGTCTATACAACTTC
>BMA0645(hutH) Score=5.8 Pos=-4 [Burkholderia mallei ATCC 23344]
CAAGTTGTCTATACAACATC
# TF - IscR: BMA1709
>BMA1709(iscR) Score=7.5 Pos=-69 [Burkholderia mallei ATCC 23344]
ATACTTGACTAAATTGGTCAAATAT
>BMA1709(iscR) Score=7.7 Pos=-42 [Burkholderia mallei ATCC 23344]
ATACTTGACAAAAATCGTCAAGATT
# TF - NagQ: BMA3168
>BMA3168(nagQ) Score=5.6 Pos=-82 [Burkholderia mallei ATCC 23344]
TGGTATTATTTTGGTTAT
# TF - NtrC: BMA1740
>BMA1743(glnA) Score=4.7 Pos=-312 [Burkholderia mallei ATCC 23344]
CGCACTAAAGCGGTGCA
>BMAA1087(narK) Score=5.2 Pos=-273 [Burkholderia mallei ATCC 23344]
CGCACCAGATCAGTGCT
>BMAA1087(narK) Score=4 Pos=-294 [Burkholderia mallei ATCC 23344]
CGCACGCACACAGTGCT
>BMA1743(glnA) Score=4.9 Pos=-283 [Burkholderia mallei ATCC 23344]
AGCACCAAATTAGTGTT
# TF - ModE: BMAA0294
>BMAA0299(modA) Score=5.7 Pos=-58 [Burkholderia mallei ATCC 23344]
CGTTATAACCTCGCGTATATTACG
# TF - LexA: BMA1211
>BMA0406(PF04055) Score=6.3 Pos=-100 [Burkholderia mallei ATCC 23344]
TACTGTATGTTTATACAGTA
>BMAA0003(PF10616) Score=6.2 Pos=-92 [Burkholderia mallei ATCC 23344]
TACTGTATATTCGTACAGTA
>BMAA0062(uvrA) Score=5.6 Pos=-143 [Burkholderia mallei ATCC 23344]
AGCTGTATAAATATCCAGTA
>BMA1211(lexA) Score=5.8 Pos=-45 [Burkholderia mallei ATCC 23344]
TACTGTATAAAAATACAGAT
>BMA1211(lexA) Score=5.6 Pos=-25 [Burkholderia mallei ATCC 23344]
CACTGTCTATCCATACAGTC
>BMA0272(recA) Score=6 Pos=-108 [Burkholderia mallei ATCC 23344]
CACTGTTTTTTTATACAGTG
>BMAA0943(BPSS1334) Score=5.1 Pos=22 [Burkholderia mallei ATCC 23344]
TACTGGATAAATTAACAGTA
>BMA3143(imuA) Score=6.3 Pos=-32 [Burkholderia mallei ATCC 23344]
TACTGTATAAACGTACAGTA
>BMA1727(dinB) Score=5.9 Pos=-28 [Burkholderia mallei ATCC 23344]
CACTGTGTTTTTGTACAGTA
# TF - PsrA: BMA1275
>BMA1275(psrA) Score=5.2 Pos=-74 [Burkholderia mallei ATCC 23344]
ATGAAAACGGCTGTTTCAAT
>BMA0530(fabH) Score=5.9 Pos=-177 [Burkholderia mallei ATCC 23344]
GATCAAACGCGGGTATGATG
# TF - RutR: BMAA1492
>BMAA1492(rutR) Score=6.7 Pos=-171 [Burkholderia mallei ATCC 23344]
TCCTGTCCGAATGGTCAGGT
# TF - FadP: BMA0196
>BMA1438(fadB) Score=5.4 Pos=-148 [Burkholderia mallei ATCC 23344]
TTGAACGACCGTTCTT
>BMA0411(etfB) Score=5.6 Pos=-147 [Burkholderia mallei ATCC 23344]
TAGAACGACCGTTCGC
>BMA1116(etfD) Score=5.7 Pos=-104 [Burkholderia mallei ATCC 23344]
TAGAACGATCGTGCTA
>BMA1813 Score=5.4 Pos=-60 [Burkholderia mallei ATCC 23344]
TAGCACGGTCGTTCAA
>BMA0196(fadP) Score=5.3 Pos=-52 [Burkholderia mallei ATCC 23344]
TAGTACGGCCGTTCGA
# TF - LiuQ: BMAA0801
>BMAA0802(liuA) Score=5.3 Pos=-155 [Burkholderia mallei ATCC 23344]
CTGAGTGTTGCTCAA
>BMAA0802(liuA) Score=5.2 Pos=-55 [Burkholderia mallei ATCC 23344]
TTGAGCAAGACTCAA
>BMAA0801(liuQ) Score=5.2 Pos=-167 [Burkholderia mallei ATCC 23344]
TTGAGTCTTGCTCAA
>BMAA0801(liuQ) Score=5.3 Pos=-67 [Burkholderia mallei ATCC 23344]
TTGAGCAACACTCAG
# TF - PhnF: BMA2399
>BMA2407(phnC) Score=5.3 Pos=-109 [Burkholderia mallei ATCC 23344]
GAAAAACATCTAGACGTATATA
>BMA2407(phnC) Score=5.3 Pos=-101 [Burkholderia mallei ATCC 23344]
TCTAGACGTATATACGGATTCA
>BMA2400(phnG) Score=6.9 Pos=-66 [Burkholderia mallei ATCC 23344]
TATAGACGTCTAGACGTTTAGA
>BMA2399(phnF) Score=6.9 Pos=-130 [Burkholderia mallei ATCC 23344]
TCTAAACGTCTAGACGTCTATA
# TF - PaaR: BMA2579
>BMA2573(paaA) Score=7.1 Pos=-62 [Burkholderia mallei ATCC 23344]
ATTAACCGACCGGTCGGTTGGT
>BMAA0543(paaZ) Score=6 Pos=-64 [Burkholderia mallei ATCC 23344]
TCCGACTAACCGGTCGGTTAAT
>BMAA0544(paaG) Score=6.1 Pos=-88 [Burkholderia mallei ATCC 23344]
ATTAACCGACCGGTTAGTCGGA
# RNA - FMN
>BMA0230(ribB) Score=94 Pos=-290 [Burkholderia mallei ATCC 23344]
TGCGTCTTCAGGGCGGGGCGAAAATCCCCACCGGCGGTAGGCCGGCATGTTGCCGGCGAGCCCGCGAGCGCCCGCGCGATTGCGCGCGGGGTCAGCAGATCTGGTCCGATGCCAGAGCCGACGGTCATAGTCCGGATGAAAGAAGATGTGCAG
# RNA - TPP
>BMA2730(thiO) Score=50.2 Pos=-358 [Burkholderia mallei ATCC 23344]
GCCGACGAAACAGGGGTGCTTCGCGCGTCCCCGGCCTGCCGAGTCGGCACGGCCGGATGCGCGACGAGGCTGAGAGAGACCCTTCGCACCCGATCCGGGTAATACCGGCGCGGGAAGTTTCCGATCCCGCCGG
>BMA3090(thiC) Score=59 Pos=-239 [Burkholderia mallei ATCC 23344]
TGCTAACGCGGGGGTCCTGCAATGCGCTCGGTCAAACGATCGTGCGCAGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTCAGGGTTTCGCCGTT
# RNA - Cobalamin
>BMA1161(cobG) Score=58.2 Pos=-309 [Burkholderia mallei ATCC 23344]
TACAGCGTCCGTCGACCGGCGCCCCACGGGGCCCAAGAGGGAACGCAGGGCGCGCCGCGCCGCTGCGGCCGCCCCCGCAACTGTGAGCAGCGAGTCCGCATCCGATCCACGCCACTGGCCACGCCGCCCTTTCGCGGCCGCCGGGAAGGCCCGCTGCGGACGACGACCTGCCAGCCAGGAGACCTGCCGGGACGTTTCGTTCGTGCAA
>BMA1172(hoxN) Score=37.8 Pos=-571 [Burkholderia mallei ATCC 23344]
CGTTTCGGTGCTCGCGCGCGGTTTCTGTCGCGCGCAGTCAAACGGGAAACAGGGAGCGTCGCCGCGTCGCGGCCCGCCAACCTGTGCTGCCCCCGCAACGGTAAGCGAAGGCATCGCGCGAGCGGTGCGACGCCGGCTTCTCCGCGCGCCTGACGGCTTGCGCGGCCAACCACTGGACGCATCGCGTCCGGGAAGGTGAAGCGGCGTTTTCGTCAGCCCGGATACCGGCCGAGACACGGGGCCCGTTC
>BMA0685(btuB) Score=17.7 Pos=-336 [Burkholderia mallei ATCC 23344]
TAAACTGGCGCCGCCTCGGTGCTCGCGCGCTTCGCGCGCGGTTAAACGGGAAGCAGGGCGCGACGTCCGCCAGGGCCGAGCCAACCTGCGCTGCCCCCGCAACGGTAAGCGATCGCATCGGAGCCGATCCGATGCCAGCCGCACTCTCGA
# RNA - SAH_riboswitch
>BMA2842(ahcY) Score=46.5 Pos=-175 [Burkholderia mallei ATCC 23344]
CGTTTCCGAGGAGCGTTGCGACGGGCCCCGCCCGCCAGGCTCGGAAATGGTCAACCGAGCGGTGTGTCG
# RNA - Glycine
>BMA2994.1(gcvT) Score=37.5 Pos=-377 [Burkholderia mallei ATCC 23344]
TCCGCACGCGTCGGGAGAGCGCGCGGCCGCCGTTCGTTGATCGAAAGGCAAGCCGCGCCGCCGAAGGGGCACACCCGCAAACTCTCAGGCAAAAGGACCGACCGCGTCGA
>BMA2994.1(gcvT) Score=29.8 Pos=-235 [Burkholderia mallei ATCC 23344]
TTTTTCGCACTCTGGAGAGCGGCAGTAGCCGCGTGCGCGCAACGCGACGCACGGGCAGGCTGCCCACCGAAGGGGCGCGCGCGAGCCGGATCGAAACCGTCGCGCAATCTCTCAGGTATCGAGGACAGAGGGGCATGC
# RNA - yybP-ykoY
>BMA0464(COG2119) Score=35.6 Pos=-212 [Burkholderia mallei ATCC 23344]
CGCTCCTCATTGGGGAGTAGCCGCTCCGCTCGAGCCGACGCCGCCCGGCGCGCTCGTGACGGAGGCGTCCGTCAACAGACTTGGCCGTCGCGGCCATGGCGGACGCAGCCCGCAGGGCCTGGCGAGACCGATGGTTCTCCGCA
# RNA - mini-ykkC
>BMA1870(ykkC) Score=45 Pos=-71 [Burkholderia mallei ATCC 23344]
TGCCCGGGGACGACCCCGGGCCGTCGATGTTCAACGGGGACGACCCCA
# RNA - sucA
>BMA1052(sucA) Score=80.2 Pos=-88 [Burkholderia mallei ATCC 23344]
CGCGCAATCCGCTAAACGGTCAGGCCGTGTCGCGGAAGGTTGAGTAACCCGCTATTTCTCGAGAAGCTCGAAGAAAGGTGAGCG
# TF - HrcA: BMA2331
>BMA3138(rpoH) Score=7.2 Pos=-88 [Burkholderia mallei ATCC 23344]
TTAGCACTCCAGTAGACGGAGTGCTAA
>BMA2002(groS) Score=7.9 Pos=-103 [Burkholderia mallei ATCC 23344]
TTAGCACTCGCTGCACGAGAGTGCTAA
# TF - NmlR: BMA1374
>BMA1374(nmlR) Score=6.2 Pos=-37 [Burkholderia mallei ATCC 23344]
CTTAGAGTGCACTCTAAG
# TF - CadR-PbrR: BMA2975
>BMA2976(cadA) Score=6.4 Pos=-414 [Burkholderia mallei ATCC 23344]
ACCTTGTAGTGACTACAAGGT
# TF - PtxS: BMA0965
>BMA0960(kguE) Score=6.9 Pos=-61 [Burkholderia mallei ATCC 23344]
GAATGGAACCGGTTCCATTC
# TF - ScrR: BMAA0467
>BMAA0466(sacB) Score=6.1 Pos=-92 [Burkholderia mallei ATCC 23344]
CGCCCAAACCGGTTTGAATT
>BMAA0466(sacB) Score=6.8 Pos=-70 [Burkholderia mallei ATCC 23344]
CATCCAAACCGGTTTGGATA
>BMAA0467(scrR) Score=6.8 Pos=-144 [Burkholderia mallei ATCC 23344]
TATCCAAACCGGTTTGGATG
>BMAA0467(scrR) Score=6.1 Pos=-122 [Burkholderia mallei ATCC 23344]
AATTCAAACCGGTTTGGGCG
# TF - GabR: BMAA0430, BMAA1478.1
>BMAA1480(gabT) Score=11.9 Pos=-139 [Burkholderia mallei ATCC 23344]
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
>BMAA0431(gbtA) Score=11.9 Pos=-107 [Burkholderia mallei ATCC 23344]
GTGGTTC-(16)-ATGGTTC-(9)-GAACCGT
# TF - BPSL1304: BMA3070
>BMA3075(RSc1793) Score=6.5 Pos=-205 [Burkholderia mallei ATCC 23344]
CGACGAAAACGTTTACATCG
>BMA3070(BPSL1304) Score=6 Pos=-36 [Burkholderia mallei ATCC 23344]
CGACGAAAACGTTTACACGC
# TF - FdsR: BMA0446
>BMA0448(fdsG) Score=4.7 Pos=-44 [Burkholderia mallei ATCC 23344]
ATATGAATCATAAGCGCATAT
>BMA0448(fdsG) Score=5.7 Pos=-130 [Burkholderia mallei ATCC 23344]
TTATGCAATTCCGTTTCCTAT
>BMA0446(fdsR) Score=5.7 Pos=-93 [Burkholderia mallei ATCC 23344]
ATAGGAAACGGAATTGCATAA
>BMA0446(fdsR) Score=4.7 Pos=-179 [Burkholderia mallei ATCC 23344]
ATATGCGCTTATGATTCATAT
# TF - UraR: BMA1511
>BMA1511(uraR) Score=5.2 Pos=-56 [Burkholderia mallei ATCC 23344]
ATTGTTGACAAT
>BMA1511(uraR) Score=5.3 Pos=-199 [Burkholderia mallei ATCC 23344]
ATTGTCGACAAA
# TF - UreR: BMA2462
>BMA2462(ureR) Score=4.4 Pos=-30 [Burkholderia mallei ATCC 23344]
GCCGGTCAGACCGCG
>BMA2462(ureR) Score=5.7 Pos=-203 [Burkholderia mallei ATCC 23344]
ACTGGTCCGACCAGT
>BMA2461(dctA) Score=5.7 Pos=-57 [Burkholderia mallei ATCC 23344]
ACTGGTCGGACCAGT
>BMA2461(dctA) Score=4.4 Pos=-230 [Burkholderia mallei ATCC 23344]
CGCGGTCTGACCGGC
# TF - MetR: BMA0468
>BMA0467(metE) Score=4.9 Pos=-90 [Burkholderia mallei ATCC 23344]
TTGAAAAAAATTCAT
>BMA0468(metR) Score=4.9 Pos=-41 [Burkholderia mallei ATCC 23344]
ATGAATTTTTTTCAA
# TF - PdxW: BMAA1398
>BMAA1397(pdxO) Score=8.3 Pos=-67 [Burkholderia mallei ATCC 23344]
CATGGTGCCAC-(13)-TCGAGCTCTTC-(2)-AACGAACATGC
>BMAA1397(pdxO) Score=11.6 Pos=-103 [Burkholderia mallei ATCC 23344]
CGTGGCTCCAA-(13)-CATGGATCTAT-(2)-ATGGTGCCACA
# TF - BPSL1086: BMA1949
>BMA1950(BMA1950) Score=19.1 Pos=-27 [Burkholderia mallei ATCC 23344]
CAACTGTACCG-(13)-CGATTGTACCG-(0)-TTACTGTGCCG-(8)-GATTACAGTTT
>BMAA0052(PF01810) Score=18.8 Pos=-110 [Burkholderia mallei ATCC 23344]
ATCCCGTACCG-(13)-AAACTGTATCG-(0)-GTACTGTACAG-(8)-CACTACACTCA
# TF - SdhR: BMAA1750
>BMAA1751(mdh) Score=7.5 Pos=-245 [Burkholderia mallei ATCC 23344]
ACATCTGTCTTATATAAGACATAAGA
>BMA0486(icd) Score=6.3 Pos=-175 [Burkholderia mallei ATCC 23344]
TCTTTTGTCTTATATAAGACTTGCGC
>BMAA1750(sdhR) Score=7.5 Pos=119 [Burkholderia mallei ATCC 23344]
TCTTATGTCTTATATAAGACAGATGT
# TF - PdxW2: BMA3061
>BMA3062(pdxO2) Score=9.9 Pos=-118 [Burkholderia mallei ATCC 23344]
TCCGGTTC-(16)-ACTGGTTC-(8)-AAACCGGT
# TF - BPSS0970: BMAA1253
>BMAA1254(fdhA2) Score=9.1 Pos=-66 [Burkholderia mallei ATCC 23344]
AACTGTGCTCTTTTT----------AGGTGTGCTCCCGCC
# TF - YdcR: BMA3050
>BMA3052(cysI) Score=9.4 Pos=-145 [Burkholderia mallei ATCC 23344]
ATCTGCTGCGCAAAA---------ATCTGCTGCTTGTTG