# RNA - TPP
>BF2557(thiS) Score=68.7 Pos=-162 [Bacteroides fragilis NCTC 9343]
TAAAGACAAAGGGGTGCCACCCGGTGGCTGAGATTATACCCTAAGAACCTGATGCAGTTAGTACTGCCGAAGGGATTGTGTATTTCTTCCGTTT
>BF0565(omp_thi) Score=55.2 Pos=-96 [Bacteroides fragilis NCTC 9343]
ATTCACTTAGTAGGGGTGCCTTAACATGACGGGCTGAGAACATACCCTTTGACCTGATCCGGGTAATGCCGGCGTAGAGAAAAACAAATTAGCAACA
# RNA - Cobalamin
>BF3484(nrdD) Score=98.1 Pos=-216 [Bacteroides fragilis NCTC 9343]
CCTTTGTAGCAGATTTCAGTACTAAAAAGAGGTTTAGTCATAAGGGAACGCTGTGCAAATCGGCGACAGTACCCGCTGCTGTAATTCTCTGAGAATCCGCACACTATGCCACTGCGCCCAGCGTGGGAAGGCGTTGCGAGGGAGAGATAAGTCAGAAGACCTGCTGAAAAAGTAAACATATTTAA
>BF2713(nrdA) Score=90.8 Pos=-286 [Bacteroides fragilis NCTC 9343]
ATCTTTGCTCCCTGATCGGTTCCGAATAGTCATTCCTCTATCCGGATTAAAAGGGAATCGGGTGTAAATCCCGGACAGTCCCGCTGCTGTGAAGCTCCGTCTGAATTTCCGATAACAACTGTTGCCACTGGGATACCTTTTTGTAAATAGATAAGGAGTCACCGGGAAGGCGTCGGAAACAAGGAGTCAGTCAGAAGACCTGCCGCTTATCAAAGGCTGTTTCC
>BF2538(cbtD) Score=92.9 Pos=-561 [Bacteroides fragilis NCTC 9343]
CTTATCTTTGTCCCGAATTGGTTTCGAATGAAGACTTTCGTCATTCGGATTAAAAGGGAATCGGGTGTAAATCCCGGACAGTCCCGCTGCTGTGAAGCTTCATCGATATCTTGAAACAATCCTTTCGCCACTGACGTGGGGGGAACACCTCCGTCGGGAAGGCTTCAAGATTAGAAGTCAGTCAGAAGACCTGCCGTTCATCAAAGGCTGTTT
>BF2539(btuB4) Score=74.1 Pos=-302 [Bacteroides fragilis NCTC 9343]
ATATTTGCAGCCGCTTAGGTGATGCATACCGGACTTTCTGTTCGTTGCATAAAAGGGAATCGGGTGTAAATCCCGAACAGTGCCCGCTACTGTGATCCCCCTGCTCTTCTACTGTTGCCATCATAATCGGAAGAAGATAAGAAAAGCATTTCTACATATACCACTGTCATAGCCTGTAAAGCATGACGGGAAGGTAGCTTTTCAAAAAGGGATAGTCAGGAAACCTGCCGAAGCAGACATAGATAACAG
>BF1583(btuB1) Score=100.6 Pos=-379 [Bacteroides fragilis NCTC 9343]
TTTATCTTTGCAGTGCATTGGTTTGTATTCTCCGTGTTCCGGGGATGCAATTAAAAGGGAATCAGGTGCAAATCCTGAACAGTCCCGCTGCTGTAAGTTTCACATCAGATTGTTGTAAGCAACCACCACTTGCCACTGGGAAACGTTTCCTGGGAAGGCGCTTATCAACAGAAACGAGTCAGAAGACCTGCCTGTGCATCTTTTTCATTG
>BF3337(pccC) Score=86.5 Pos=-356 [Bacteroides fragilis NCTC 9343]
ATATTTGTCGCCGAATTGGTTCGGAATCCGTGGTCAACGGACGAAGATTAAAAGGGAATCGGGTGTAAATCCCGGACAGTCCCGCTGCTGTGAAACTCTGTATAGCATCTTATCAATCAGCCAATTTCGTACCACTGACAGAAAAAGCAAACTCTGTCGGGAAGGTCCCGGTAAGATGTAGAGTCAGTCAGAAGACCTGCCATTCGTGAATAAGAGCATTC
>BF2696(metE) Score=97.7 Pos=-272 [Bacteroides fragilis NCTC 9343]
TTATATTTGTCGGCAGATTGGTTCGCCGAAGCTTTCCTGCTTTGGGCGATTAAAAGGGAATCGGGTGTAACTCCCGGACAGTCCCGCTGCTGTGAAGTTTTATTATAAACATTCCGACAGGATACTCTTTGGCCACTGACTCGTGTAGTCGGGAAGGCGTTCGGAATGGAAGCTAAGTCAGAAGACCTGCCACTCTCGCTGATAAGTCT
# TF - HTCS_Man-3: BF3301
>BF3308(manF3  ) Score=8.2 Pos=-238 [Bacteroides fragilis NCTC 9343]
ATACGATTTCGGGACA-----ATCCAAATTTATGTCA
# TF - HTCS_Fru: BF3174
>BF3178(BF3178) Score=8.2 Pos=-44 [Bacteroides fragilis NCTC 9343]
GAAACAAAA------------GAAACAAAT
>BF3177(scrL) Score=7.7 Pos=-114 [Bacteroides fragilis NCTC 9343]
GTATCAATC------------GAAACAAAA
# TF - Zur: BF1284
>BF1283(zntA) Score=5.8 Pos=-64 [Bacteroides fragilis NCTC 9343]
TTGCAACTTTGTTGCAC
# TF - ArgR: BF0483
>BF0483(argR) Score=5.8 Pos=-18 [Bacteroides fragilis NCTC 9343]
TTAGAATAATTATACAAG
# TF - KdgR: BF2720
>BF0082(kduI1) Score=4.1 Pos=-61 [Bacteroides fragilis NCTC 9343]
GTCGTGTGCGTAAACGGA
>BF0809(hexT) Score=4.5 Pos=-198 [Bacteroides fragilis NCTC 9343]
GTCGTGTGCGAAAACGAT
>BF0809(hexT) Score=4.6 Pos=-176 [Bacteroides fragilis NCTC 9343]
ATTGTGTTCGATAACGAA
>BF2719(kdgK) Score=5.7 Pos=-228 [Bacteroides fragilis NCTC 9343]
TTTGTGCCCGGACACACT
>BF2719(kdgK) Score=5.5 Pos=-146 [Bacteroides fragilis NCTC 9343]
TTTGTGTCCGCACACGGA
>BF2720(kdgR) Score=5.5 Pos=-125 [Bacteroides fragilis NCTC 9343]
TCCGTGTGCGGACACAAA
>BF2720(kdgR) Score=5.7 Pos=-43 [Bacteroides fragilis NCTC 9343]
AGTGTGTCCGGGCACAAA
# TF - FucR: BF0210
>BF0210(fucR) Score=6 Pos=-59 [Bacteroides fragilis NCTC 9343]
CTTTGTATCATGATAGTTCAGCATAG
>BF0211(fucI) Score=5.1 Pos=-57 [Bacteroides fragilis NCTC 9343]
CTGTGTGTCAGCACAGGTCAGCATAG
# TF - XylR: BF2354
>BF2354(xylR) Score=5.4 Pos=-280 [Bacteroides fragilis NCTC 9343]
CATACCCTATAAAATACAATAAG
>BF2354(xylR) Score=5.1 Pos=-197 [Bacteroides fragilis NCTC 9343]
CTTTCTGTACTTTCTACAATTAC
>BF2354(xylR) Score=5.7 Pos=-150 [Bacteroides fragilis NCTC 9343]
CATATTGTTATCGATACAATAAG
>BF2354(xylR) Score=5.4 Pos=-117 [Bacteroides fragilis NCTC 9343]
CTTAGTGTAAAATTTACGATATG
# TF - Crp: BF0954
>BF2389(serB) Score=6.2 Pos=-71 [Bacteroides fragilis NCTC 9343]
TTTTATGTTATTTAGCATAAAT
>BF4221(PF01694) Score=5 Pos=-227 [Bacteroides fragilis NCTC 9343]
ATATATGTTACACAAAAGATAT
>BF4221(PF01694) Score=5.7 Pos=-105 [Bacteroides fragilis NCTC 9343]
TTTTCTGTTGTAGAACAGAATT
>BF3646 Score=6 Pos=-151 [Bacteroides fragilis NCTC 9343]
TTTTATGTTGAATAACATATTT
>BF1323(pflB) Score=6.3 Pos=-107 [Bacteroides fragilis NCTC 9343]
TTTTATGCTATTCAACATAAAA
>BF2582(PF09719) Score=5.9 Pos=-99 [Bacteroides fragilis NCTC 9343]
TAATCTGTTATATAACATAATT
>BF0210(fucR) Score=5.6 Pos=-114 [Bacteroides fragilis NCTC 9343]
TTTGATGTTGTATAACATACCA
>BF0315(BT1272) Score=5.7 Pos=-90 [Bacteroides fragilis NCTC 9343]
TATTATGTTACAAAACATATAC
>BF0594(susC_Crp-4) Score=5.4 Pos=-162 [Bacteroides fragilis NCTC 9343]
TTCTATGTTATTAGACATAAAA
>BF2354(xylR) Score=4.6 Pos=-81 [Bacteroides fragilis NCTC 9343]
AACAATGCTTTATAGCATATTA
>BF0954(crp) Score=4.6 Pos=-33 [Bacteroides fragilis NCTC 9343]
ATTTGTGCTTTATAACACAGTT
>BF0316(COG3533) Score=5.7 Pos=-143 [Bacteroides fragilis NCTC 9343]
GTATATGTTTTGTAACATAATA
# TF - NanR: BF1711
>BF1719(susC_Nan-5) Score=5.3 Pos=-39 [Bacteroides fragilis NCTC 9343]
ATTATAATTTTCTTTATTATTAA
>BF1796(fucA) Score=5.3 Pos=-21 [Bacteroides fragilis NCTC 9343]
TATTTAATATAATTATATAATAT
>BF3530(exbB) Score=5.5 Pos=-43 [Bacteroides fragilis NCTC 9343]
ATAATAATAATTTAATTAATTAA
>BF1712(nanA) Score=6.3 Pos=-150 [Bacteroides fragilis NCTC 9343]
TTATTAATAAAATATTTTATTAT
>BF1712(nanA) Score=5.3 Pos=-41 [Bacteroides fragilis NCTC 9343]
ATATTAAAAATCTATATCATTAA
>BF2953(nagB-II) Score=4.8 Pos=-128 [Bacteroides fragilis NCTC 9343]
TAGGTAAAAAAAGATTTTAATTT
>BF1806(nanH) Score=5.6 Pos=-91 [Bacteroides fragilis NCTC 9343]
TATATAATAAAATATTTAATTAA
>BF1806(nanH) Score=6.1 Pos=-88 [Bacteroides fragilis NCTC 9343]
ATAATAAAATATTTAATTAATAT
>BF1814(manA) Score=5.1 Pos=-27 [Bacteroides fragilis NCTC 9343]
ATATTAATAAATAATAGTATTGA
>BF1711(nanR) Score=4.8 Pos=-52 [Bacteroides fragilis NCTC 9343]
TTAATAAACAAATTAACTATCTT
# TF - HcpR: BF2205
>BF2204(hcp) Score=6 Pos=-88 [Bacteroides fragilis NCTC 9343]
TTGTAACATTGGTTACAG
>BF3316(dnrN) Score=6 Pos=-64 [Bacteroides fragilis NCTC 9343]
CTGTAACATTGGTTACAA
# TF - PerR: BF3019
>BF3019(perR) Score=6.8 Pos=-39 [Bacteroides fragilis NCTC 9343]
AAAATTGTAATGAATACAATTTT
>BF2364(PF05140) Score=6.2 Pos=-86 [Bacteroides fragilis NCTC 9343]
AAAATTGTATTTAATACAAATTA
>BF3647(PF01637) Score=5.9 Pos=-36 [Bacteroides fragilis NCTC 9343]
ATATTTGCAATAATTATAAATAT
# TF - Fur: BF3244
>BF1353(feoB) Score=6.4 Pos=-78 [Bacteroides fragilis NCTC 9343]
ATTTAAAAACAATCTAAAT
# TF - NrfR: BF0365
>BF0360(nrfH) Score=6.1 Pos=-73 [Bacteroides fragilis NCTC 9343]
AATGTAATCTGGATTACATC
# TF - GalR: BF0315
>BF0315(galR) Score=6.3 Pos=-115 [Bacteroides fragilis NCTC 9343]
ACTGATACGAACTGGTA
# TF - MalR
>BF3146(susC) Score=5.6 Pos=-172 [Bacteroides fragilis NCTC 9343]
TGATGCAATCGTTTGCGGAG
>BF1158(susB) Score=5.7 Pos=-100 [Bacteroides fragilis NCTC 9343]
TTATGCAAACGTTTTCTGAT
>BF3134(susA) Score=6.1 Pos=-108 [Bacteroides fragilis NCTC 9343]
CAATGAAAACGTTTGCATAA
>BF3147(malR) Score=5.6 Pos=-163 [Bacteroides fragilis NCTC 9343]
CTCCGCAAACGATTGCATCA