# TF - NagR: LSA1587
>LSA1588(nagA) Score=5.7 Pos=-56 [Lactobacillus sakei subsp. sakei 23K]
TTTTTGGTCTATACCATTTA
>LSA1355(glmS) Score=4 Pos=-137 [Lactobacillus sakei subsp. sakei 23K]
ACTCAGGGCTATACCAATGT
>LSA1355(glmS) Score=5.4 Pos=-114 [Lactobacillus sakei subsp. sakei 23K]
TAATTGAAATATACCAATAA
>LSA0060(nagE) Score=5.3 Pos=-150 [Lactobacillus sakei subsp. sakei 23K]
TATACGGTATAGACCAAAAT
>LSA0060(nagE) Score=5.1 Pos=-95 [Lactobacillus sakei subsp. sakei 23K]
TTAAAGGTCTATACCAACTA
>LSA0417(nagB) Score=5.2 Pos=-55 [Lactobacillus sakei subsp. sakei 23K]
TAATTGGACTATACCAATGG
# TF - PdxR: LSA1351
>LSA1351(pdxR) Score=9.4 Pos=-53 [Lactobacillus sakei subsp. sakei 23K]
AATTGGCTT----------CAGCCAATT
>LSA1352(pdxK2) Score=9.4 Pos=-87 [Lactobacillus sakei subsp. sakei 23K]
AATTGGCTG----------AAGCCAATT
# TF - PurR: LSA1651
>LSA0276(guaB) Score=4.9 Pos=-56 [Lactobacillus sakei subsp. sakei 23K]
TAATACGAACATT
>LSA0087(pbuO) Score=5.4 Pos=-101 [Lactobacillus sakei subsp. sakei 23K]
AAACACGAACTAT
>LSA1651(purR) Score=5.6 Pos=-120 [Lactobacillus sakei subsp. sakei 23K]
AAAAACGAACAAT
>LSA1648(glmU) Score=4.2 Pos=-24 [Lactobacillus sakei subsp. sakei 23K]
AATCACGAATATT
>LSA0655(purC) Score=5.6 Pos=-58 [Lactobacillus sakei subsp. sakei 23K]
AAAAACGAACAAT
>LSA0655(purC) Score=4.9 Pos=-110 [Lactobacillus sakei subsp. sakei 23K]
ATAAACGAACTTT
>LSA0652(purE) Score=4.3 Pos=-112 [Lactobacillus sakei subsp. sakei 23K]
TAACACGTACAAT
# TF - CcpA: LSA0415
>LSA0067(ptcA) Score=4.3 Pos=-42 [Lactobacillus sakei subsp. sakei 23K]
TTGTAAGCGTAGTCAA
>LSA1685(rpiA) Score=4.4 Pos=-65 [Lactobacillus sakei subsp. sakei 23K]
TTTAAAGCGCTTTTTT
>LSA0200(rbsU) Score=4.3 Pos=-114 [Lactobacillus sakei subsp. sakei 23K]
TGTAAACCGTTTTCAA
>LSA1170(glpF2) Score=4.1 Pos=-95 [Lactobacillus sakei subsp. sakei 23K]
ATAAAAGGGCTTTAAT
>LSA0649(glpK) Score=4.3 Pos=-43 [Lactobacillus sakei subsp. sakei 23K]
AAGGAAACGTTTTCCA
>LSA1702(adhA) Score=4.8 Pos=-39 [Lactobacillus sakei subsp. sakei 23K]
ATGGAAACGATTTCAA
>LSA0764(galK) Score=4.5 Pos=-31 [Lactobacillus sakei subsp. sakei 23K]
ATGAAAGCGATTAATA
>LSA1113(sufC) Score=3.9 Pos=-74 [Lactobacillus sakei subsp. sakei 23K]
TGAAAAGCGTTCTCAT
>LSA1048(fruR) Score=4.3 Pos=-40 [Lactobacillus sakei subsp. sakei 23K]
TTGTAAACGATGACAT
>LSA1048(fruR) Score=4 Pos=-130 [Lactobacillus sakei subsp. sakei 23K]
ATGAAAACCTTTACAC
>LSA1188(spxB) Score=4.8 Pos=-89 [Lactobacillus sakei subsp. sakei 23K]
TTGTAATCGATTTCAA
>LSA1146(pmi) Score=4.1 Pos=-99 [Lactobacillus sakei subsp. sakei 23K]
ACGAAATCGCTTTAAA
>LSA0122(dhaT) Score=4.1 Pos=-55 [Lactobacillus sakei subsp. sakei 23K]
CGGTAAGCGTTATCAT
>LSA0122(dhaT) Score=4.2 Pos=-147 [Lactobacillus sakei subsp. sakei 23K]
TTTGTAACGCTTTCAT
>LSA0542(adhX) Score=4.3 Pos=-66 [Lactobacillus sakei subsp. sakei 23K]
TTGTAAACGATTCTAA
>LSA0379(adhE) Score=4.5 Pos=-74 [Lactobacillus sakei subsp. sakei 23K]
TTACAAACGGTTTCAA
>LSA0299(gntP) Score=4.5 Pos=-36 [Lactobacillus sakei subsp. sakei 23K]
ATGTAAACGCAAACAA
>LSA0260(yghZ) Score=4.5 Pos=-45 [Lactobacillus sakei subsp. sakei 23K]
ATGTAACCGATTGCAT
>LSA1793(scrB) Score=4.1 Pos=-59 [Lactobacillus sakei subsp. sakei 23K]
TATCAAACGTTTACAT
>LSA1793(scrB) Score=4.3 Pos=-163 [Lactobacillus sakei subsp. sakei 23K]
ATACAACCGTTTACAT
>LSA1793(scrB) Score=4.5 Pos=-188 [Lactobacillus sakei subsp. sakei 23K]
TTGTAAACGCTTTTCA
>LSA0414(pepQ) Score=4.1 Pos=-120 [Lactobacillus sakei subsp. sakei 23K]
ATGCAAGCGGTTTACA
>LSA0428(lp_0827) Score=4.8 Pos=-174 [Lactobacillus sakei subsp. sakei 23K]
TTGACAACGCTTACAT
>LSA0934(lplA1) Score=4.3 Pos=-20 [Lactobacillus sakei subsp. sakei 23K]
ATGAAAGGGGTTTTAT
>LSA1085(pdhA) Score=4 Pos=-115 [Lactobacillus sakei subsp. sakei 23K]
TGTAAAACGCTTGCAT
>LSA1860(araE) Score=4.7 Pos=-78 [Lactobacillus sakei subsp. sakei 23K]
TTGAAACCGTTTTATA
>LSA1200(treP) Score=4.4 Pos=-105 [Lactobacillus sakei subsp. sakei 23K]
TTGTAAACGGTTCAAA
>LSA1201(treR) Score=4.4 Pos=-82 [Lactobacillus sakei subsp. sakei 23K]
TTTGAACCGTTTACAA
>LSA1201(treR) Score=4.2 Pos=-145 [Lactobacillus sakei subsp. sakei 23K]
GTAAAAGCGCTTTCTG
>LSA1711(lacL) Score=4.9 Pos=-37 [Lactobacillus sakei subsp. sakei 23K]
ATGAAACCGTTTTAAT
>LSA0449(manL) Score=4.2 Pos=-136 [Lactobacillus sakei subsp. sakei 23K]
AGTAAAGCGTTTTAAA
>LSA1792(scrA) Score=4.5 Pos=-54 [Lactobacillus sakei subsp. sakei 23K]
TGAAAAGCGTTTACAA
>LSA1792(scrA) Score=4.2 Pos=-183 [Lactobacillus sakei subsp. sakei 23K]
ATGTAAACGTTTGATA
>LSA0449(manL) Score=4.6 Pos=-57 [Lactobacillus sakei subsp. sakei 23K]
TTGTTAGCGTTTTTAT
>LSA1830(spxB) Score=4.1 Pos=-71 [Lactobacillus sakei subsp. sakei 23K]
TTTGTAACGCTTACAA
>LSA0138(coaA) Score=3.8 Pos=-44 [Lactobacillus sakei subsp. sakei 23K]
ATGTAACCGTTTAGCA
# TF - AraR: LSA1861
>LSA1860(araE) Score=5.7 Pos=-250 [Lactobacillus sakei subsp. sakei 23K]
ATAATTATTCGAATAAATAA
>LSA1860(araE) Score=4.6 Pos=-150 [Lactobacillus sakei subsp. sakei 23K]
ATATTGATTCGAATCAAAAA
>LSA1860(araE) Score=4.7 Pos=-121 [Lactobacillus sakei subsp. sakei 23K]
TGATTTATTCGAATGAAAGT
# RNA - L10_leader
>LSA1667(rplJ) Score=79.1 Pos=-164 [Lactobacillus sakei subsp. sakei 23K]
TAGTTGGTTATTTATGCTACCGAAGACTCAGGTGCCAATAGGCTTAATATCCTGCCGAGGAAGATACGTTGAAATCCCTCTCTATGTCTTGGTGGACATGGAGTTTTTTATTTTATAAG
# RNA - TPP
>LSA0968(thiT) Score=57 Pos=-146 [Lactobacillus sakei subsp. sakei 23K]
CCATCGCAAAGGGGAGCCATTGGCTGAGAGTGATTAGATGATCAGACCCTTCGAACCTGTTTGTTAAGACAAGCGTAGGAATTGTGATGGAGTTGAGACT
>LSA1095(tenA) Score=60.9 Pos=-203 [Lactobacillus sakei subsp. sakei 23K]
AATAACGCATCTGGGGTGCCTAAGAGCTGAGATTATACCCATTGAACCTGATATAGTTAGTACTAGCGCAGGGAAATGTCGTGTCGTTTGT
>LSA0059(thiM) Score=69.4 Pos=-178 [Lactobacillus sakei subsp. sakei 23K]
CGCTTTGCACTAGGGGTGTTCTTAGAAGAACTGAGATAGGTTTGTACAACCTGATCCCTTTGAACCTGTAAGTTCAGACTTGCGTAGGAAAGTGCCTTTCTCTATTA
# RNA - FMN
>LSA1023(ribU) Score=101.5 Pos=-260 [Lactobacillus sakei subsp. sakei 23K]
GGTTCGTCTTCAGGGGCAGGGTGTAATTCCCGACCGGCGGTAAAAGTCCGCGACCTGCTGCAATGTTGATTCTTGTGGTGGCTGAACTGGTGTGATCCCAGTACCGATAGTGAAAGTCTAGATGGAAGAAGATAGGG
# RNA - PyrR
>LSA1629(pyrG) Score=19.9 Pos=-153 [Lactobacillus sakei subsp. sakei 23K]
TATATTCTATGGGCGCTTTACAATTATTTGTGAAGCCAGAATCGGTTAACAAGCTCCCTGTTCATTTTGAATAGGGAGCTTGTTTTT
>LSA1211(codB) Score=56.3 Pos=-122 [Lactobacillus sakei subsp. sakei 23K]
TAATTCCTTTTAAGTGCAGTCCAGAGAGGCTGACAAAGGAGCGACTATCGGGATTTAATGGCCTCGCTCTGTTTTGGAGTGGGCCTTTTTTGTT
>LSA0951(pyrP) Score=41 Pos=-169 [Lactobacillus sakei subsp. sakei 23K]
GAACCGTTTAATTGTCTCCAGAGAGAGCAAAAGGGTTTGCCCGCATAATTGGCGAAAACTGACTAGCATCAGTTCGCCCACTATGCGTCCAAAGGACATACCCGCAGAGTAGGGATGTCCTTTTTTTATCG
>LSA0950(pyrR) Score=63.7 Pos=-141 [Lactobacillus sakei subsp. sakei 23K]
AAACCTTTAATTTCAGTCCCGTGAGGCTGAGAAGGCACGGTGAATTAATCCATTAGATTAGAACTCTAGGACTAGTCTCAAACTGTAACCTCTCAACCAATATCGGTTGAGAGGTTTTTTGTTGG
# RNA - L13_leader
>LSA1722(rplM) Score=61.4 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
TGGTATTGTTTGCCCCACGATAGGCCCCGGAAACTTATTGAGTGTCAAACAAACACAGA
# RNA - L19_leader
>LSA0719(rplS) Score=32.3 Pos=-56 [Lactobacillus sakei subsp. sakei 23K]
CGATATTCCGCTGGCGCAAGACGTTAATGAATATCTGTG
# RNA - L20_leader
>LSA1398(infC) Score=57.7 Pos=-189 [Lactobacillus sakei subsp. sakei 23K]
AGAAATAAAGCAGAAGTTCCCGCTTCTCGCCTTAGTAGACACTTGATGTCTCTGGGCTGATAGTTTCTAATTCGGACGAATTAAGTTATCGAATAGCGGGCCTTTCTGTTGAAGGGGCCGTTTTTTTGGTGCT
# RNA - L21_leader
>LSA0670(rplU) Score=62.6 Pos=-88 [Lactobacillus sakei subsp. sakei 23K]
CACAGCTGCAACCGCGCATACTAAGGCATTAAGTACTATTATTAGTCACCTTAGTTGGCGAGTCTAAGAAAAAATAG
# RNA - Lysine
>LSA1817(lysP) Score=107.6 Pos=-297 [Lactobacillus sakei subsp. sakei 23K]
TAACAAGATAAGAGGTCGCAAAAACCATCAGTCGTTATTCTGAACTGACTAAGCAGTGATGAGGAATAATTAAAGGGGAATTTGCCGAAATGTCAATTTGCTTATTCAAATTGATGTTGGGACTTGATTGAATAAATCAAGGACTGTCGTAACGAAACGTTACGGGGCGCTATCAACGG
# RNA - PreQ1
>LSA1610(queT) Score=52.5 Pos=-52 [Lactobacillus sakei subsp. sakei 23K]
AAAAAACGTGGTTCGTAACCATCCCACGCTAAAAAACTAGGAGGAT
>LSA0830(iunH) Score=47.2 Pos=-64 [Lactobacillus sakei subsp. sakei 23K]
GCTTGGACTGGTTCGGAAACTTCCCAGAATAAAAAACTAAGGATCT
# RNA - S15
>LSA1066(rpsO) Score=18.7 Pos=-70 [Lactobacillus sakei subsp. sakei 23K]
TCTGTTTAGCGACGTTCACCCGACGCTATTCGTTGTTTCGGGTAATATAACTGAAGGGTGGAAATTAGCAATGGCTATTTCACAAGCAAGAAAAAACGAAATCATCAATGAATATGCACGTCACGAA
# TF - Rex: LSA0848, LSA0356
>LSA0802(noxE) Score=4.7 Pos=-193 [Lactobacillus sakei subsp. sakei 23K]
TTTATAATAAAATCACAA
>LSA1606(ldh) Score=4.9 Pos=-97 [Lactobacillus sakei subsp. sakei 23K]
TTCTGAAAATTTAAACAA
>LSA0848(rex2) Score=5.1 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
ATATGAAAAAATTCACAA
>LSA0379(adhE) Score=5.1 Pos=-99 [Lactobacillus sakei subsp. sakei 23K]
CTGTTAAAAAAATCACAA
>LSA0379(adhE) Score=5.2 Pos=-42 [Lactobacillus sakei subsp. sakei 23K]
TTGTTAATTAAATCACAT
>LSA1702(adhB1) Score=5.3 Pos=-73 [Lactobacillus sakei subsp. sakei 23K]
TTGTGAAAAAAATCATAA
>LSA0122(dhaT) Score=5.3 Pos=-35 [Lactobacillus sakei subsp. sakei 23K]
TTGTGAAATAATTCAGAA
# RNA - ykoK
>LSA1086(COG0474) Score=133.2 Pos=-390 [Lactobacillus sakei subsp. sakei 23K]
ATCGCTTTTCCGTTAGGTGAGGCTCCTATATGAACATACGCTGCTACTCAGAAACATCGAGAGATGCCAATTGAGTCAACAAAAACTGCCAATGAAGGCTTTTTCTAACGTAGCTGAACATGGTTTCTACGTCATATAGTGCTAAAACTGAACGATTGGGAACGCCA
# RNA - yybP-ykoY
>LSA1568(atcL) Score=47.9 Pos=-161 [Lactobacillus sakei subsp. sakei 23K]
GAGGTTAACGATAAGGGAGTAACTGGCAGCTTGTCTGCGATAACGCCACCAACAAGGCAATATTCTGGTGTTATCTTAATTAGTGAGACTTATAGGGATTTT
# RNA - T-box(Ala)
>LSA0387(alaS) Score=32.4 Pos=-190 [Lactobacillus sakei subsp. sakei 23K]
TCATTAGAACGACAGGAACAACACCCTTGACTGAGAGGTGCTGACTACGGATTGACGCGCTCCCCAACGCCTAAATAATTGAATAAACTCATAAAGAGGTTAACGACTAACATCGTTGCAATCAAGGTGGTACCGCGCTTTTGCGTCCTTGAATT
# RNA - T-box(Asp)
>LSA0863(hisS) Score=52.2 Pos=-227 [Lactobacillus sakei subsp. sakei 23K]
GATGACCAGTGATAAAGTATGGTAAACGCACCACTTAACAGAGACGATTTCAAAGCTGAAAGAAATTGACGGTGTCCACCTGACTGCTTTTGAGGTCTGCGTGTCTAACACGCCGTTGGCTAACAACGTTATGCTTAAGCAAAAATTAAGGTGGTACCGTGCATTCAAGCACCCTTGTTCA
# RNA - T-box(Arg)
>LSA1421(argS) Score=66.8 Pos=-215 [Lactobacillus sakei subsp. sakei 23K]
GAACAGTCAAAAGAATAGTGTTAGCAGCGATTAATAGCGAGTCCGGGGTTGGTGGAAGCCGGATAATCAAGCTGATGCGGCGCACTTTTGGTTGAACAATTGCATACTATTGAGTGGATCGATTGATCAATCAGAGTGGTACCGCGGGAATTCTCGTCTCTTTC
# RNA - T-box(Cys)
>LSA1681(cysS) Score=86.5 Pos=-732 [Lactobacillus sakei subsp. sakei 23K]
GTATAAATTGATGAAGAGAAGAAGTAGATTAGCCGGATTTTCAGAAAGCTTCTGGGCGCTGTGAAGAAGTAATTGGGCTAGTCGAAATGCACCTTGGAGATGCTAGTGGACTTTGGCTGCTAGTCGGGACACCGTTATCTGCTTGAGGCATTTTTGCGAAGAAAAGTGGAACCACGCTCAACCGGCGTCTTTTGT
# RNA - T-box(Gly)
>LSA0880(glyQ) Score=52.7 Pos=-222 [Lactobacillus sakei subsp. sakei 23K]
AATAGACGTTGAAGAAAAGGGTCCCTTGAAACGGTCAGACAGTGATTCTAGGTGAGTGAGAACTAGAACAAGTTTTAAGTGGATTGGCATTTCGGAGTCATACCAATGAAGCAGCAGCTCGCTTTGAGCTGAAGTAGGGTGGAACCGCGAGAAATCGTCCCTATGTG
# RNA - T-box(Ile)
>LSA0756(ileS) Score=98.7 Pos=-253 [Lactobacillus sakei subsp. sakei 23K]
AACAGACAATAACAAGAATTAACAAATTAAATAACATTTAAGCGAGCCAACGACTGGTGGAAGGTTGGTAATGCTCTATTTAGTGTGTATCACCTTGTTGTTTTTCAGATGAATCAAGTAGTTTGGAACGGCCAATGCCCGTTAACGCATCTTAAGGAGGGTCTTTGACTCTCAAAATTAGGTGGTACCACGAAGATTTCGTCCTATACAG
# RNA - T-box(Leu)
>LSA1436(leuS) Score=118.2 Pos=-311 [Lactobacillus sakei subsp. sakei 23K]
TTATTTAACGTTGAGAGGGATTAGTAGTTAAGTGAAACGTCCAGAGAGCGTGTGGTTAGTGCGAACACGTCGTTGAACTTAGCGAACTCACCTTTGAGTTTTCTATTGAAATCAAGTAGATAGAAACGTCAGCCACGTTACGGCCAGAGAGTTGCTCAGTTTGAACTGGGCAGAACTTAGGTGGCATCGCGGTCAATTCGTCCTATGG
# RNA - T-box(Met)
>LSA1116(metN) Score=80.3 Pos=-309 [Lactobacillus sakei subsp. sakei 23K]
AATACAAGCGATGAAAAGATGAGTAGATAACTTAGTAGCATTTTAAGAGAGTCCGGTCAGGTGCAAGCGGATAATGTGAACAATTTTCGAATATGGTCTTTGAGCAAATTCATTTGGTAAGGTTTAACTGAGCCGAGTGCGGGGGTTGCCCGATATAGCGAACGAGTATCGATCCTGGTACTTTGTAAGGCGATTATTGTGAAGTAGTCGTGAAATTAAGGTGGTAACACGCAAATTGGCGTCCTTTCT
# RNA - T-box(Phe)
>LSA1376(pheS) Score=110.5 Pos=-242 [Lactobacillus sakei subsp. sakei 23K]
TTTATAGACAAAGATGAAAAAGAGTAACCTAACAACCAACTTTCAGGGAGAATAATCATAGACTGTAAGTTATTCAGTTGAGTTTAGGTGAAGTTCACTTTCAGAGTTGACCGTTGAGTCCGGTATTGCCCGTTACGCAAACTTGAGTGTATGACTAGGTCATAAACTAGGGTGGTACCGCGAAGCTTCGTCCCTTTT
# RNA - T-box(Ser)
>LSA1803(serS) Score=79.1 Pos=-257 [Lactobacillus sakei subsp. sakei 23K]
GAAAAACACGTGAATAAGCGCCTATATGGATTGACAGAGAGATACCGGTTGGTGGAAGGTATTGAATCCAGTATTCCAGCGTAATAGTGGGTAGTGAATAACTACACGGCACCTGACCGTTATCAGCAATGAAGGGCACTGGTTATTTGGTAATCAGTGAACTTGGGTGGTACCGCGAATGTGAAGTCTTTTCGTCCCAATT
# RNA - T-box(Thr)
>LSA1400(thrS) Score=63 Pos=-278 [Lactobacillus sakei subsp. sakei 23K]
GAGTCAATCAACGATGAAAGATACCTTTTAAATGGCAGTATTGATCAGGGAGAAAAACATAACTGAAAGTTTTTCATAAGGACATTTAATTGACCACTTTCTAGAGGCTTAAGTCAGTCGGGTCGTTTCCGTTAAAGACGCTTAAAGTTGGAGAATCACCATTTGATTCTCAATCTGGGTGGAACCGCGAAATCAATTCGTCCCTGAG
# RNA - T-box(Trp)
>LSA0327(trpS) Score=86.2 Pos=-253 [Lactobacillus sakei subsp. sakei 23K]
AAACAGAGTGAAGGATAAGTAGCAACTTTAACTTTTTGTACAGGAAGCGGCGGTACTGAGAAGTCGTCAAAAGCAAGTTGTGAATGGGCCTTTAATCGGGAGCTGGTGATAAGCCAGTTCGGGTAGCGCCCTTATCGCATAAGTGGCACGATTTTTTCGTGCAATTTAGGTGGTACCACGTCTAAGCGTCCTAATTGT
# RNA - T-box(Tyr)
>LSA1827(tyrT) Score=61.4 Pos=-386 [Lactobacillus sakei subsp. sakei 23K]
TCATCTCATTCAAACCAAGTAATGCTTTATCTGTGTGTCAGGAAGTCGGTGGTTGCTGCGAACCGACCAGGGTAAATGTCGTGAAATACTGAATGAAGACTTCGGCTAATTAACAGGACCGTTACCCCCTGTAAGAGTGGCGTGTTGGCTTAAATTGGCGCGCTAAATGGGTGGTACCGCGGTTTCCAATCGTCCCTATTCG
>LSA0769(tyrS) Score=66.9 Pos=-256 [Lactobacillus sakei subsp. sakei 23K]
AAATATCAATGACCGCGTAATGAGTAGAGAATAAGCCACTATATCAGAGAGCTGGGATTGCTGGAAACCAGTATATGCTTAGAATCGAATTACAATACGCTAAGTGGTCAGACGTGTGATTGACGTACCAATCAATGAGTGATGCTAGGCAACTAGCATAATTCGGGTGGTACCGCGAACTTAAACTTTAAGTCGTCCCTATAAT
# RNA - T-box(Val)
>LSA0849(valS) Score=101.5 Pos=-272 [Lactobacillus sakei subsp. sakei 23K]
ACAACGCGTTGAACAAGAGCGATTAATATTGGACTAGTTTAGAGAGAAGATGCATGGCTGAGACGTCTTCCAATGACCAATTAATCGGTAGCTTGTGAGCTGTTAACCTGAAATTTAGTAGGGCTAACCGGACCATTTCGTTCGTTAACAAATCATGAGTTGGGGACTAGTCTAGTCCTAATTTAGGTGGTACCGCGAAAAAGCATTCGTCCTATTGTG
# TF - NiaR: LSA1530
>LSA1529(niaP) Score=5.9 Pos=-76 [Lactobacillus sakei subsp. sakei 23K]
TTAAGGTGTGTTGACACCTGTA
# TF - GlnR: LSA1322
>LSA1322(glnR) Score=6.3 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
ATGTCAGAAAACCTAACAT
# TF - SdaR: LSA0710
>LSA0711(grtP) Score=4.9 Pos=-38 [Lactobacillus sakei subsp. sakei 23K]
GATTGTGTTATATAACAAAA
# TF - CopR: LSA1461
>LSA1461(copR) Score=6.4 Pos=-35 [Lactobacillus sakei subsp. sakei 23K]
ATAATTACAAATGTAAACGA
# TF - ScrR: LSA1794
>LSA1793(scrB) Score=5.9 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
AATGACATACGTTTGACATA
>LSA1792(scrA) Score=6.1 Pos=-169 [Lactobacillus sakei subsp. sakei 23K]
TATGTCAAACGTATGTCATT
>LSA1792(scrA) Score=6.3 Pos=-101 [Lactobacillus sakei subsp. sakei 23K]
TATGATAATCGTTTGACATA
>LSA1793(scrB) Score=6.2 Pos=-145 [Lactobacillus sakei subsp. sakei 23K]
TATGTCAAACGATTATCATA
# TF - DeoR: LSA0800
>LSA0795(deoC) Score=5.1 Pos=-34 [Lactobacillus sakei subsp. sakei 23K]
TTGAAAGCGTTAACAA
# TF - CggR: LSA0603
>LSA0603(cggR) Score=6.5 Pos=1 [Lactobacillus sakei subsp. sakei 23K]
TGCGCGATGAGTTATCTGCAATAGAAGCGGTTGCGCC
# TF - PadR: LSA0265
>LSA1701(padC) Score=7.2 Pos=-41 [Lactobacillus sakei subsp. sakei 23K]
AAACATGTAATTAATTACATGATA
# TF - PerR: LSA0109
>LSA0466(perR) Score=4.7 Pos=-38 [Lactobacillus sakei subsp. sakei 23K]
TGATAATGATTATCA
>LSA1194(pcl2) Score=5.6 Pos=-43 [Lactobacillus sakei subsp. sakei 23K]
TTATAATGGTTATAA
>LSA0969(cadA) Score=5.3 Pos=-65 [Lactobacillus sakei subsp. sakei 23K]
TGATAATAATTCTAA
>LSA0575(npr) Score=5 Pos=-61 [Lactobacillus sakei subsp. sakei 23K]
TTGTAATAATTATTA
# TF - TreR: LSA1201
>LSA1200(treP) Score=6 Pos=-78 [Lactobacillus sakei subsp. sakei 23K]
CAACTTGTCTATACATGTTG
>LSA1201(treR) Score=6.1 Pos=-113 [Lactobacillus sakei subsp. sakei 23K]
CAACATGTATAGACAAGTTG
# TF - MntR: LSA0380
>LSA0180(mntC) Score=6.3 Pos=-34 [Lactobacillus sakei subsp. sakei 23K]
AAGTTAGGTATACCTAAAAG
>LSA1699(mntH) Score=5.8 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
AAGTTAGGGCATCCTAAAAT
>LSA0246(mntH) Score=5.5 Pos=7 [Lactobacillus sakei subsp. sakei 23K]
AAGTTAAGGGACCCAAAAAG
# TF - RbsR: LSA0203
>LSA0200(rbsU) Score=6.9 Pos=-49 [Lactobacillus sakei subsp. sakei 23K]
TTAGTAAAACGTTTTACTAA
# TF - ArgR: LSA0681, LSA0615
>LSA1057(artPQ) Score=4.5 Pos=-55 [Lactobacillus sakei subsp. sakei 23K]
ATTGCATAAATATTTATA
# TF - GalR: LSA0763
>LSA0184(LVIS_1906) Score=5.5 Pos=-111 [Lactobacillus sakei subsp. sakei 23K]
AAAAGTTTAGTAAAATGAA
>LSA0763(galR) Score=5.4 Pos=-101 [Lactobacillus sakei subsp. sakei 23K]
AAACATTTACTAAAAAATC
>LSA0764(galK) Score=5.5 Pos=-45 [Lactobacillus sakei subsp. sakei 23K]
AAATGTTTAGTAAAATGAA
# TF - HrcA: LSA1238
>LSA0358(groS) Score=6.8 Pos=-55 [Lactobacillus sakei subsp. sakei 23K]
TTAGCACTTGAGTGTTTAGAGTGCTAA
>LSA0050(hsp) Score=7.7 Pos=-96 [Lactobacillus sakei subsp. sakei 23K]
TTAGCACTCGTGATAAAAGAGTGCTAA
>LSA1238(hrcA) Score=7 Pos=-41 [Lactobacillus sakei subsp. sakei 23K]
TTAGCACTCGTAATAATCAAGTGCTAA
>LSA0207(clpC) Score=5.9 Pos=-121 [Lactobacillus sakei subsp. sakei 23K]
GTGGCACTTTTCTTGCTAGAGTGCTAA
# TF - Zur: LSA0109
>LSA0282(znuA) Score=6.5 Pos=-37 [Lactobacillus sakei subsp. sakei 23K]
TAAAGCGTAACTATTACGATTTA
# TF - NrdR: LSA1403
>LSA0942(nrdH) Score=5 Pos=-89 [Lactobacillus sakei subsp. sakei 23K]
CTACCATATCTGGTAT
>LSA1459(nrdD) Score=5.1 Pos=-75 [Lactobacillus sakei subsp. sakei 23K]
ACACTATATATAGTTG
>LSA1189(pnuN) Score=4.2 Pos=-155 [Lactobacillus sakei subsp. sakei 23K]
CTACCATATTTTGAAT
>LSA1189(pnuN) Score=5.4 Pos=-105 [Lactobacillus sakei subsp. sakei 23K]
GTACTATATATAGTGT
# TF - CcpB: LSA1554
>LSA1553(ywbB) Score=5.3 Pos=-56 [Lactobacillus sakei subsp. sakei 23K]
CTGGGACGCGTTTCAT
# RNA - THF
>LSA0348(folT) Score=83.1 Pos=-138 [Lactobacillus sakei subsp. sakei 23K]
TCGGAGTAGGGATTAAAGCGTTAAGTGCTGGTGGAACGGAATGTGAACACCAGACGAAGAGCAGTAATGCTCGCGGTTTTAGTCCCGCATTCGCCGCAGT
# TF - CcpN: LSA1142
>LSA1142(ccpN) Score=5.4 Pos=-138 [Lactobacillus sakei subsp. sakei 23K]
ATATAGTGTGTCACATTACAA
>LSA1141(ppdK) Score=5.4 Pos=-55 [Lactobacillus sakei subsp. sakei 23K]
TTGTAATGTGACACACTATAT
# TF - FruR: LSA1048
>LSA1048(fruR) Score=6.1 Pos=-83 [Lactobacillus sakei subsp. sakei 23K]
TGATTGTTTTTGAACGTTTT
>LSA1048(fruR) Score=5.4 Pos=-73 [Lactobacillus sakei subsp. sakei 23K]
TGAACGTTTTTGAAATATTT
# TF - CtsR: LSA1780
>LSA0531(clpP) Score=6 Pos=-116 [Lactobacillus sakei subsp. sakei 23K]
TACCATTTGACCATAGTTGACCTT
>LSA1238(hrcA) Score=5.3 Pos=-87 [Lactobacillus sakei subsp. sakei 23K]
CAATTCTTGACTTTATTTGACGTT
>LSA1040(clpB) Score=6.5 Pos=-89 [Lactobacillus sakei subsp. sakei 23K]
GAATGTTTGACCTATTTTGACTAT
>LSA1465(clpE) Score=-1.8 Pos=-66 [Lactobacillus sakei subsp. sakei 23K]
AAGGTCAAAGATAGTCAAACAAAC
>LSA1780(ctsR) Score=-0.8 Pos=-77 [Lactobacillus sakei subsp. sakei 23K]
ATAGTCAACGTTAGTCAAAGTTAA
# TF - LexA: LSA1275
>LSA1055(uvrC) Score=4.4 Pos=-35 [Lactobacillus sakei subsp. sakei 23K]
ACGAACACTTGTTTTG
>LSA0683(LJ1544) Score=4.9 Pos=-56 [Lactobacillus sakei subsp. sakei 23K]
TAGAACGTTTGTTCGT
>LSA0683(LJ1544) Score=5 Pos=-29 [Lactobacillus sakei subsp. sakei 23K]
ACAAACAAATGTTCGG
>LSA0976(parE) Score=4.7 Pos=-113 [Lactobacillus sakei subsp. sakei 23K]
GCGAACATACATTTGG
>LSA0487(recA) Score=4.9 Pos=-94 [Lactobacillus sakei subsp. sakei 23K]
AAGAACGTTTGTTCGA
>LSA0523(uvrB) Score=4.9 Pos=-190 [Lactobacillus sakei subsp. sakei 23K]
GCGAAAATACGTTCGG
>LSA1275(lexA) Score=4.7 Pos=-70 [Lactobacillus sakei subsp. sakei 23K]
ACGAACACTTGTTTGA
# TF - Lp_2742: LSA0929
>LSA0929(lp_2742) Score=6.5 Pos=-262 [Lactobacillus sakei subsp. sakei 23K]
TTAACTACATAAGTAACTAA
# TF - YtrA: LSA1419
>LSA1419(ytrA) Score=6.8 Pos=-61 [Lactobacillus sakei subsp. sakei 23K]
GTGTACTACGTATAATAGTACAG
# TF - GntR1: LSA0296
>LSA0296(gntR1) Score=5.2 Pos=-70 [Lactobacillus sakei subsp. sakei 23K]
ATAGAAAATTATTTTCGTA
>LSA0297(gntZ) Score=5.2 Pos=-96 [Lactobacillus sakei subsp. sakei 23K]
TACGAAAATAATTTTCTAT
# TF - ExuR: LSA0130
>LSA0129(uxaC) Score=5.9 Pos=-38 [Lactobacillus sakei subsp. sakei 23K]
ATGTTAACGATAACAT
# TF - MleR: LSA0440
>LSA0441(mleS) Score=5.3 Pos=-97 [Lactobacillus sakei subsp. sakei 23K]
TATAAATCTATTTTATC
>LSA0440(mleR) Score=5.3 Pos=-51 [Lactobacillus sakei subsp. sakei 23K]
GATAAAATAGATTTATA
# TF - FlpA: LSA1781
>LSA1783(copZ) Score=6.1 Pos=-79 [Lactobacillus sakei subsp. sakei 23K]
AACTTGATGGCGATCAATTT
>LSA1784(cadA) Score=6.3 Pos=-75 [Lactobacillus sakei subsp. sakei 23K]
AACTTGATGGCTATCAAGTT
# TF - NihR: LSA0783
>LSA0784(PF09861) Score=5 Pos=-148 [Lactobacillus sakei subsp. sakei 23K]
TTGAACATTTGTTAAC
>LSA0783(nihR) Score=5 Pos=-101 [Lactobacillus sakei subsp. sakei 23K]
GTTAACAAATGTTCAA
# TF - AguR: LSA0073
>LSA0067(ptcA) Score=4.8 Pos=-121 [Lactobacillus sakei subsp. sakei 23K]
AAATGGAACAAAATACACAT
# TF - FlrR: LSA1054
>LSA1054(flrR) Score=6.1 Pos=-95 [Lactobacillus sakei subsp. sakei 23K]
CGTTACACTTGTAACA
>LSA1053(flr) Score=6.1 Pos=-33 [Lactobacillus sakei subsp. sakei 23K]
TGTTACAAGTGTAACG
# RNA - SMK_box_riboswitch
>LSA0468(metK) Score=68.9 Pos=-82 [Lactobacillus sakei subsp. sakei 23K]
AGAGTTATAAGAAGTTCCCGATAGGATTCACACACCGTGAAGAGGCCTTGTAACCGACACATATATAGGGGGAAACATAGAAATGCA