# TF - CcpB: LACR_2447
>LACR_2446(ywbB) Score=6.3 Pos=-56 [Lactococcus lactis subsp. cremoris SK11]
ATGGAACGCGTTTCAT
# TF - RbsR2: LACR_1803
>LACR_1803(rbsR2) Score=6 Pos=-66 [Lactococcus lactis subsp. cremoris SK11]
AAATGAAAACGGATACAATC
# TF - CmbR: LACR_0375
>LACR_2344(gshT) Score=4.5 Pos=-136 [Lactococcus lactis subsp. cremoris SK11]
ATCATAAATCTTTTTTATGGT
>LACR_1009(tcyA) Score=5.1 Pos=-77 [Lactococcus lactis subsp. cremoris SK11]
GCTATAAGTTTTTTTTATGGC
>LACR_0360(plpA) Score=4.4 Pos=-476 [Lactococcus lactis subsp. cremoris SK11]
TTTATAAATTAAACTTAAAAA
>LACR_0068(cysD) Score=4.4 Pos=-171 [Lactococcus lactis subsp. cremoris SK11]
ACTATTTAAAAATTCTATAAC
>LACR_1368(metE) Score=4.7 Pos=-39 [Lactococcus lactis subsp. cremoris SK11]
TTGATAAGATAGACCTATTAA
# RNA - L10_leader
>LACR_1387(rplJ) Score=81.8 Pos=-152 [Lactococcus lactis subsp. cremoris SK11]
ACGGTTCTAAAAGAACTGACCGAAGACAGTAGGGGACGAAAGTCATAAACTTCCTACCGAGGACAAATATCAAAATGATAATTGAACTCTCTATGTCTTTTGTGTGTAGAGATTTTTTGTTTCTACA
# RNA - TPP
>LACR_0359(thiT) Score=55.5 Pos=-147 [Lactococcus lactis subsp. cremoris SK11]
ATATTTGCACAATGGGTCTATTGACAAGTCTGTCAGTAGCGAGAAATACCATCTGACCTGATCTGGGTAATGCCAGCGTAGGAATGTGTTAAGACAATCGT
>LACR_1377(thiM) Score=52.6 Pos=-183 [Lactococcus lactis subsp. cremoris SK11]
TCTAATACACAATGGGTACTGATAATTTTAAATTATCGGTTGAGAAAGACCATCAAACTTGAACAGGTTAAGACCTGCGTAAGAATGTGTCCGAGTTTTTAT
# RNA - FMN
>LACR_1395(ribU) Score=100.4 Pos=-252 [Lactococcus lactis subsp. cremoris SK11]
AAAATATCTTCAGGGCACCGTGTAATTCGGGACCGGCGGTAAATAAGGCTTTGACCTTATGACTCCGCGATTCGCTACGGCGATTGAAGCAGTGAAACTCTGCTAGCGACAGTAAAGTCTGGATGGAAGAAGATGAAC
# RNA - PyrR
>LACR_1470(pyrK) Score=56.9 Pos=-208 [Lactococcus lactis subsp. cremoris SK11]
TAAAACCTTTAACTAAGTCCAGAGAGGCTTGCAAGGATACGGAAAATTTATCTTGGATTACTGACAAACTAAGGATGAACTTCTTTTTTAGCGTATTTGTCTGTCAGTAAATGACCAATTTTTTAGTACACTTGTAAGTTCTCTTACAAGTGTTTTTTTATT
>LACR_1159(pyrE) Score=56.2 Pos=-298 [Lactococcus lactis subsp. cremoris SK11]
TAACTTTTAAACTAGTCCAGAGAGGCTAGCAAGGTTGAAATCAGGAAAAACTAATTTTATTTTTACTGACAGGATTTTCTGTCAGTAAAAATGAACTTGTTTTGATACTTTTTACACTTGCTAAGTCTCTTGGTAAGTGTTTTTTATTG
>LACR_1712(pyrR) Score=57.8 Pos=-220 [Lactococcus lactis subsp. cremoris SK11]
TCTAACCTTTAAGATTGTCCAGAGAGGCAGGCAAGGTCAGAAATTAATAATGTAATAATATGATGGATACTGTCCATTTTCTGATATCTACCTGCATTCTCTTTGGAATGCAGCTTTTTTGTAT
>LACR_1498(carB) Score=58.4 Pos=-290 [Lactococcus lactis subsp. cremoris SK11]
TAAAACTTTTAATCTAGTCCAGAGAGGCTAGCAAGGTTGTGAACAGGAAATATTATCCTTAAAAGTTACTGACAAAAGAGCGGTGTAGCTTGGTCCATAAGTACCAAAGCGGACAGGGCTAGTTCTGTCAGTAAACTGTCAGGGCATATTAGGACACATCTGCTAGGTTTCTGGCAGATGTTTTTGCTT
# RNA - L13_leader
>LACR_2584(rplM) Score=52.5 Pos=-103 [Lactococcus lactis subsp. cremoris SK11]
CGGTATTGTTTACCCCATTTTTGTGGCCCCGGAAACCCAAAAATACTTTGCAGGACTCTTACACCTGCTGTAAACAAATT
# RNA - L19_leader
>LACR_0945(rplS) Score=18.3 Pos=-60 [Lactococcus lactis subsp. cremoris SK11]
TGTTCATCCGCTGAGCTTAATTTGCTAAAAGCTGCTTATGATGGGCAAGA
# RNA - L20_leader
>LACR_2033(infC) Score=81.7 Pos=-58 [Lactococcus lactis subsp. cremoris SK11]
AGTTGAAAAGCAGAAGCACCCGCTTCTCGCCTTAGAGGTTATAGCCCTGGGCAAACAAATGGAATTATTCAAAAACGAATGTTTTCATGAGCGGGGCGAGATTGTCGTTCCGCTTTTGTTTTTCTTT
# RNA - L21_leader
>LACR_1180(rplU) Score=42.7 Pos=-112 [Lactococcus lactis subsp. cremoris SK11]
ATAAAGTGCAACCGCACGAAGTTTCGTAATAAGTGGCGTAAGCCCACGAACAAAGGCGAGTCTAACAGTCGCTTG
# RNA - Lysine
>LACR_2505(lysP) Score=99.9 Pos=-338 [Lactococcus lactis subsp. cremoris SK11]
ACATCGATAGAGGTCGCAACTGATATGAATCTACGCCGAGTTGGAGCACAACAAAGACGCGTATTAGAGGGGGAGAAGTTGCCGAAAGAATTTTGACGCTCAGCAAAGTTCTTGGGCTAGTGAGGAAAACTCACTAGACTGTCGCAAATGGTTAAGAACCATGCGGAGGGCTATTCGTTCAAG
>LACR_1729(dapA) Score=67.5 Pos=-277 [Lactococcus lactis subsp. cremoris SK11]
AAACAAAATTAGAGGTTGCAAAGACGAAAAAATTAGTGGAGCGGTGAACGCAATGAAACTGGTGGCGGCGTTTTTTGCCGAAAGAAAAATTGTCACAGAATTTTTCTTGGGCTGTATGGTTAAATCCTACAGACTGTCTTTCTGTCAGTACTGACAGAAGGGGGAGCTAATCAAAAT
# RNA - Purine
>LACR_1265(xpt) Score=61.3 Pos=-205 [Lactococcus lactis subsp. cremoris SK11]
TGAGCTGCTATAAACAATCTTATTTATACCTAGAATATGGCTGGGCGTTTCTACCTCGTACCGTAAATGCGAGACAATAAGGAAATTCGATTTTTCAAA
# RNA - S15
>LACR_2081(rpsO) Score=25.7 Pos=-67 [Lactococcus lactis subsp. cremoris SK11]
CGTTCTTGGTTTCATGCTTGCCAAGCTGTCACTCGGACTGGGCAATACAAATAAAGGAGAAAAACTCATGGCAATTTCAAAAGAAAAAAAACAAGAAATCATCGCTCAATACGCTCGTAAAGAA
# TF - Rex: LACR_1156
>LACR_1202(pncB) Score=4 Pos=-218 [Lactococcus lactis subsp. cremoris SK11]
TTGTAGTATAAAAAACAT
>LACR_2457(adhE) Score=5 Pos=-101 [Lactococcus lactis subsp. cremoris SK11]
TTGTAAATTTCATCACAA
>LACR_2457(adhE) Score=4.7 Pos=-58 [Lactococcus lactis subsp. cremoris SK11]
TTGTTAAACTATTCACGT
>LACR_2457(adhE) Score=4.5 Pos=-34 [Lactococcus lactis subsp. cremoris SK11]
AAGTGAATGAAATCACAA
>LACR_0668(eno) Score=4.4 Pos=-80 [Lactococcus lactis subsp. cremoris SK11]
TTGAAAAATCTTTCAAAA
>LACR_0248(pgk) Score=4.5 Pos=-91 [Lactococcus lactis subsp. cremoris SK11]
TTGTGATATAATTAACCT
>LACR_1455(ldh) Score=4.1 Pos=-63 [Lactococcus lactis subsp. cremoris SK11]
TTGTTGAAAAGATTATAT
>LACR_1156(rex) Score=5.3 Pos=-74 [Lactococcus lactis subsp. cremoris SK11]
TTGATAAAATTATCACAA
# RNA - preQ1-II
>LACR_0847(queT) Score=80.2 Pos=-103 [Lactococcus lactis subsp. cremoris SK11]
CTGTTAAAATAAAAACGTTGCTCAATTGCGAGTCAACCCTTGAGCCTTCTTCCCTTTGCTCAAGCATATTAAACGCGACATTTTGTCGCCAAAGGAGAGTATTTTGAA
# RNA - ykoK
>LACR_1370(mgtB) Score=93.7 Pos=-413 [Lactococcus lactis subsp. cremoris SK11]
GCATAGCCATCGGTAGGTGAGGCTACCGCAGGGATACGGGTTGCTGCCGCAGAGTCGTGGAGACACGATGAGAGGGCCAACAGTTCATGTCGAAAAAGAAGGCGTGAAATAGTGCAACAACATTGCCCTGCGGAGCTAAAGCTTGAACGATAGCTTGTAACT
# RNA - yybP-ykoY
>LACR_1501(atcL) Score=85 Pos=-184 [Lactococcus lactis subsp. cremoris SK11]
TAAATATTCCAAAGGGGAGTAGCGTCGGTAAGACCGAAACAAAGTCGTCAATTCGTGAGATTCTCACCGGCTTTGTTGACATACTATGTATGTTTAGCAAGACCTTTGCCAGTTTT
# RNA - T-box(Ala)
>LACR_1887(alaS) Score=31.3 Pos=-208 [Lactococcus lactis subsp. cremoris SK11]
GATAAAAGTGCTTATAGCAGAGAGAACTGCTCTAACAACCAAAGTAAGATGATAGAAATTCTATCGTGAATAAGGGTGGTACCGCGGTATAACTGTATGCGCCCCTTTG
# RNA - T-box(Asp)
>LACR_2228(hisS) Score=33.6 Pos=-182 [Lactococcus lactis subsp. cremoris SK11]
GTTATAATCAATTTGAGGCTCTGATTTTCTAGGAGCAAATTTAGGTGGTACCGTGCAATAATGCACCCTA
# RNA - T-box(Gly)
>LACR_1195 Score=18.9 Pos=-109 [Lactococcus lactis subsp. cremoris SK11]
ATAAAGGTGGAACCGTGCATGTGCACCCTTTG
# RNA - T-box(His)
>LACR_1336(hisC) Score=81 Pos=-284 [Lactococcus lactis subsp. cremoris SK11]
AAACAAGAGATGAAAGAGTAGTCTTACTTATCAGTAGAGAGAGCCTTGTTGCTGGAAAAAGGTCTGATGCTAAGATGAACCACACTCATCGCTATCTTACTCACCAAATAATTGTGAGCGTTGGCTACGTTACTGCTGAGTTTAACACAAACTCACTGAGGCTACTTTTGTGAAAAAGTAGTAAATTAAGGTGGAACCACGACATTACCGTCCTTTAA
# RNA - T-box(Ile)
>LACR_2056(ileS) Score=52.3 Pos=-354 [Lactococcus lactis subsp. cremoris SK11]
TCTAATTTTACTGACAGATTTTCTTATCTCGAATTAAATTAGAGAAATCTTGAACTGAACTCAAAGTAAGTTTAAGCGTATCGCACGTTACGCGATTAGAGTTTCTGTCAGTAAGTTTTACTGACAGAAAAAATGAAGGTGGTACCACGGTTTTTCGTCCTTTAC
# RNA - T-box(Met)
>LACR_0360(metQ) Score=73.7 Pos=-372 [Lactococcus lactis subsp. cremoris SK11]
TAAAAGCGGTCGAGTAAGTAATTGTGAAAGTCAGTACAGAGAGCTTGTAGCGGTGAGAGCAAGCCTGAATGAAGCAATGAAAATGGCTTGATAAGCGTAGCAAAAGTGAGGTTTTACCAAGCTTTTGACGGCATGGTTCTCGTTATTGAACTTAAAAGTTTGCTTTTGTAAAGTTTATCTGAAAATTTTCAGTGAGCTACAAAGTGCTTAAATCAAGAATGGTACCACGATATAGCTCGTTTCTTTTTA
# RNA - T-box(Phe)
>LACR_2201(pheS) Score=47.8 Pos=-351 [Lactococcus lactis subsp. cremoris SK11]
AATTAAGCTTATAAGTAAGAAGAGTAAATTATTTACGAAATTTAAGGGAGTTATGGTCACCGACTGAAAGCCATAATATGGAGTGATATTTGAAGTTCACCTTACGAATAAAAGCTATTTTTGAGAGGAATTCTTTAGAAGGATAATCTTAAAAAAGTTTTATGGTAATTAAATAAAAAAATTAAGTGATAAAATAGGATGGTACCGCGGTTTTCGCTCCTTTG
# RNA - T-box(Ser)
>LACR_1870(serS) Score=83.9 Pos=-337 [Lactococcus lactis subsp. cremoris SK11]
TAAAATAATTTTAGAAGAGGGTCTTGTGAACTTTTTTAGAGAGCTTGCGTTTGGTGAAAGCAAGTAAAATTAAGCAACGACTTTCTACTTCTTTTAAATTTCTCATGAAAATGAGAACGTTCTGTTTACGTTACAAACATGAGAGTTCTATTTTTACTGACAGATTTTTCAGTAAATCAATAGATAATTTAGGTGGAACCGTGCGATTATCGCGCCCTAATTCA
# RNA - T-box(Thr)
>LACR_2181(thrS) Score=22.3 Pos=-264 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAATTCTAGCATGACCATGAGCGCTATGGCTTCAATGGCTATCCTAGGTCAAGAATCCAAGCAGTTCTGTAAGTAGTAATTGTGGTGATTGTTGGCATAAAGAAGAGTCAGTAAATGAAACAAAGGTGGTAACACGCAGATAGCGTCCTTTAA
# RNA - T-box(Trp)
>LACR_0058(trpS) Score=92.3 Pos=-341 [Lactococcus lactis subsp. cremoris SK11]
TAAAATTTATTACAACAAGAAAGTAACTTTGATTTTGAAATCTCTAGGAAGTTGGTGGTTGTGTAAACCAACGTTTTCAGCAAGGTGAATGGGCTTGTTATTAACTAATGAATTTGATTTAAAAAAATAATGAATCACGGCCGCTTCCGTTACACAGCAACCTGTTTACTGACAGGTCTTAAGAAAATCATTTGATTTTAAAATTACGGTGGCACCGCGCTCAAAAGCGCCCGTAGG
>LACR_1560(trpE) Score=40.9 Pos=-312 [Lactococcus lactis subsp. cremoris SK11]
ATTTAAAGTCGAAAAGTCTTATTTTTCGCAATTTGATTTGAAACAATAAAAATCACGGATGCTCCCGATACCAAGCGACTTGTTGTTAGACGAGGAAAAGAAGAGAATTTTCTAGTATTTTTGTAATACTTTTAAGGACTCTTAAATTACGGTGGCACCGCGTGGAATACGCCCGTAGA
# RNA - T-box(Val)
>LACR_2480 Score=83.9 Pos=-320 [Lactococcus lactis subsp. cremoris SK11]
AAACAAGTTGACGAGGAGTAATAAAGCAAGACTTATAGAGAGAACACGGCTGGTGAAAGTGTTCATTCAAACTTTATGAAGGTTGCGTCATTTCAAGAAATAATTGCTGACATCTTCGGCTTTGCCTCGAATATCGATTCTCGCTACGCTACTAAAGTAGCTAGTCGAAGTCGTAACCAATCCTGTCAGTAATTATGACATAAAATGAGTGTCTGTCAGTAAATCTGTCAGGAATTTAGGTGGTACCGCGCGTGAGCGTCCTATTT
# TF - NagR: LACR_1526
>LACR_1667(nagB) Score=6.1 Pos=-39 [Lactococcus lactis subsp. cremoris SK11]
AAATTGATATATACCAATTT
>LACR_1094(glmS) Score=5 Pos=-47 [Lactococcus lactis subsp. cremoris SK11]
ATAATTAAATATACCAATTT
>LACR_1458(nagA) Score=5.6 Pos=-74 [Lactococcus lactis subsp. cremoris SK11]
TAATTGGTATATACTGTTTA
# TF - MurR: LACR_1243
>LACR_1240(murX) Score=6.6 Pos=-111 [Lactococcus lactis subsp. cremoris SK11]
AAACGAAATAATATTTCTTAA
>LACR_1240(murX) Score=6.6 Pos=-71 [Lactococcus lactis subsp. cremoris SK11]
GCTTGAAATAATAATTCGTTT
# TF - LACR_0766: LACR_0766
>LACR_0761(LACR_0761) Score=6.3 Pos=-35 [Lactococcus lactis subsp. cremoris SK11]
AGAGTTTAACGTTAAACTAA
# TF - NrdR: LACR_0794
>LACR_1063(ndrH) Score=5.7 Pos=-174 [Lactococcus lactis subsp. cremoris SK11]
GCACAATATATTGTGT
>LACR_1063(ndrH) Score=5.1 Pos=-133 [Lactococcus lactis subsp. cremoris SK11]
ACACTATATCTAGTAT
>LACR_0277(nrdD) Score=5.2 Pos=-68 [Lactococcus lactis subsp. cremoris SK11]
ATTCTATATATTGTGT
>LACR_0277(nrdD) Score=5.9 Pos=-99 [Lactococcus lactis subsp. cremoris SK11]
ACACAAGATATTGTGT
# TF - CopR: LACR_0889
>LACR_0920(copB) Score=5.6 Pos=-65 [Lactococcus lactis subsp. cremoris SK11]
AGGTTTACAATCGTAAACTT
>LACR_0427(ydiD) Score=5.8 Pos=-106 [Lactococcus lactis subsp. cremoris SK11]
ATGTTTACATGTGTAAATTT
>LACR_2184(cinD) Score=6.2 Pos=-72 [Lactococcus lactis subsp. cremoris SK11]
TAGTTTACAAGTGTAAATTT
>LACR_0889(copR) Score=5 Pos=-53 [Lactococcus lactis subsp. cremoris SK11]
GTGTTTACGCGTGTAAACTT
>LACR_2184(cinD) Score=5.6 Pos=-45 [Lactococcus lactis subsp. cremoris SK11]
AAGATTACAGATGTAAACAA
>LACR_0891(copA) Score=6.1 Pos=-54 [Lactococcus lactis subsp. cremoris SK11]
AAGTTTACAATTGTAAACTA
>LACR_0072(yahC) Score=5.9 Pos=-45 [Lactococcus lactis subsp. cremoris SK11]
TCGTTTACAATTGTAAACAT
# TF - ArgR: LACR_2324, LACR_0929
>LACR_1978(artQ) Score=4.5 Pos=-41 [Lactococcus lactis subsp. cremoris SK11]
TTTTTATAAAAATAGAAA
>LACR_1978(artQ) Score=4.7 Pos=-63 [Lactococcus lactis subsp. cremoris SK11]
ATATTATAATTATGCTAT
>LACR_1978(artQ) Score=4.1 Pos=-105 [Lactococcus lactis subsp. cremoris SK11]
AATTAATTTTTATACAAA
>LACR_2323(argS) Score=4.7 Pos=-69 [Lactococcus lactis subsp. cremoris SK11]
ATAGCATAATTATACCAT
>LACR_0856(argC) Score=4.3 Pos=-11 [Lactococcus lactis subsp. cremoris SK11]
AGGGTATAGATATGAAAA
>LACR_0584(artP) Score=4.9 Pos=-95 [Lactococcus lactis subsp. cremoris SK11]
TTTAAATAATTATAAAAT
>LACR_0584(artP) Score=5.1 Pos=-84 [Lactococcus lactis subsp. cremoris SK11]
ATAAAATAAATATGCAAT
>LACR_0856(argC) Score=5.5 Pos=-32 [Lactococcus lactis subsp. cremoris SK11]
AGTGTATAAAAATACATA
>LACR_0856(argC) Score=5.8 Pos=-82 [Lactococcus lactis subsp. cremoris SK11]
AATGTATAAAAATACAAT
>LACR_0584(artP) Score=5.3 Pos=-43 [Lactococcus lactis subsp. cremoris SK11]
ATTGTATAATTATACTTA
>LACR_0125(argG) Score=4.2 Pos=-83 [Lactococcus lactis subsp. cremoris SK11]
AACGCATATTTATACAAA
>LACR_0125(argG) Score=5.1 Pos=-55 [Lactococcus lactis subsp. cremoris SK11]
AATGAATAAATATGCTGT
>LACR_2321(arcB) Score=4 Pos=-31 [Lactococcus lactis subsp. cremoris SK11]
AATATTTAAAAATAGAAA
>LACR_2321(arcB) Score=4 Pos=-109 [Lactococcus lactis subsp. cremoris SK11]
AATTTATAAATTTAGTTT
# TF - MalR: LACR_1846
>LACR_1852(nepU) Score=5.7 Pos=-191 [Lactococcus lactis subsp. cremoris SK11]
ATTCGCAAACGGTTGCGTCA
>LACR_1853(malE) Score=6.1 Pos=-68 [Lactococcus lactis subsp. cremoris SK11]
AAAAGCAAACGGTTGCGTAA
# TF - GlnR: LACR_2513
>LACR_2513(glnR) Score=5.6 Pos=-74 [Lactococcus lactis subsp. cremoris SK11]
ATGTGAGAAAATCTCACAT
>LACR_1699(nrgA) Score=5.8 Pos=-85 [Lactococcus lactis subsp. cremoris SK11]
GTGTTATATTTTATGACAT
>LACR_1699(nrgA) Score=6 Pos=-138 [Lactococcus lactis subsp. cremoris SK11]
ATGTTATGTTATATAACAT
>LACR_1923(glnP) Score=6 Pos=-199 [Lactococcus lactis subsp. cremoris SK11]
ATGTCATAAAACCTAACAT
# TF - NmlR: LACR_2072
>LACR_1627(ypiA) Score=6.3 Pos=-50 [Lactococcus lactis subsp. cremoris SK11]
AGTTGACTTGAAGTGGACT
>LACR_2072(nmlR) Score=5.6 Pos=-39 [Lactococcus lactis subsp. cremoris SK11]
TATTGACTTAAAGTTCACT
# TF - FabT: LACR_0820
>LACR_0823(fabD) Score=4.3 Pos=-34 [Lactococcus lactis subsp. cremoris SK11]
TATTTGAATTTGAAATA
>LACR_0587(fabI) Score=4.1 Pos=-160 [Lactococcus lactis subsp. cremoris SK11]
ATTTTGATATACAAAAC
>LACR_0586(fabZ) Score=4.2 Pos=-132 [Lactococcus lactis subsp. cremoris SK11]
GTTTTGTATATCAAAAT
# TF - CcpA: LACR_1812
>LACR_1946(natA) Score=4.3 Pos=-123 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACGGTAAAAT
>LACR_1825(udk) Score=4.2 Pos=-94 [Lactococcus lactis subsp. cremoris SK11]
ATGTGAACGCTTAAAA
>LACR_2247(fruR2) Score=4.2 Pos=-109 [Lactococcus lactis subsp. cremoris SK11]
TATGAAGCGATTTCAT
>LACR_1803(rbsR) Score=4.5 Pos=-64 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACGGATACAA
>LACR_2168(fbaA) Score=4.4 Pos=-100 [Lactococcus lactis subsp. cremoris SK11]
AATAAAGCGGTTACTT
>LACR_1853(malE) Score=4.7 Pos=-32 [Lactococcus lactis subsp. cremoris SK11]
AATAAACCGTTTTCAT
>LACR_1853(malE) Score=4.1 Pos=-163 [Lactococcus lactis subsp. cremoris SK11]
TTTAAAGGGCTTTATT
>LACR_1546(licT) Score=4.5 Pos=-95 [Lactococcus lactis subsp. cremoris SK11]
AATAAAACGGTTACAA
>LACR_1546(licT) Score=4.1 Pos=-186 [Lactococcus lactis subsp. cremoris SK11]
TTAAAAACGCAATCAA
>LACR_C06 Score=4.2 Pos=0 [Lactococcus lactis subsp. cremoris SK11]
ATGAAATTGCTTTTAA
>LACR_2317(aat) Score=4.5 Pos=-162 [Lactococcus lactis subsp. cremoris SK11]
ATGTAAACGATTTATA
>LACR_1533(coaA) Score=4.1 Pos=-68 [Lactococcus lactis subsp. cremoris SK11]
TTTAATACGCTTACAG
>LACR_0691(pfl) Score=5.1 Pos=-156 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACGTTTTAAA
>LACR_1031(fruR) Score=4.2 Pos=-25 [Lactococcus lactis subsp. cremoris SK11]
TTGTAAACGAATTCAG
>LACR_1812(ccpA) Score=4.4 Pos=-93 [Lactococcus lactis subsp. cremoris SK11]
TTGAAAAGGTTTACAG
>LACR_0723(malQ) Score=5.1 Pos=-61 [Lactococcus lactis subsp. cremoris SK11]
AAGAAAACGTTTTCTT
>LACR_2456(ywcC) Score=4.6 Pos=-64 [Lactococcus lactis subsp. cremoris SK11]
CTGAAAACGCTTTTTT
>LACR_1457(pfk) Score=4.4 Pos=-143 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACGTTTCATA
>LACR_1457(pfk) Score=4.2 Pos=-184 [Lactococcus lactis subsp. cremoris SK11]
TAGAAAACCCTTGCAA
>LACR_2470(pgi) Score=4 Pos=-148 [Lactococcus lactis subsp. cremoris SK11]
AAATAAGTGCTTACAT
>LACR_1813(pepQ) Score=4.4 Pos=-136 [Lactococcus lactis subsp. cremoris SK11]
CTGTAAACCTTTTCAA
>LACR_2298(typA) Score=4 Pos=-71 [Lactococcus lactis subsp. cremoris SK11]
TTGTAAACGTGTGCAT
>LACR_2298(typA) Score=3.8 Pos=-167 [Lactococcus lactis subsp. cremoris SK11]
TATTTAGCGATTTTAT
>LACR_0408(yjbM) Score=4.6 Pos=-50 [Lactococcus lactis subsp. cremoris SK11]
CAGAAAACGTTTTAAT
>LACR_0667(raiA) Score=4.4 Pos=-133 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAGCTGTTTCAT
>LACR_2295(ackA) Score=4.4 Pos=-129 [Lactococcus lactis subsp. cremoris SK11]
ATGCAAACGCTTTTTA
>LACR_2294(ackA) Score=4.3 Pos=-30 [Lactococcus lactis subsp. cremoris SK11]
AATAAAACGCATACAT
>LACR_0133(yscN) Score=4.1 Pos=-115 [Lactococcus lactis subsp. cremoris SK11]
TGTTAAACGGTTTCAT
>LACR_1990(adhB1) Score=4.6 Pos=-44 [Lactococcus lactis subsp. cremoris SK11]
AAGAATGCGTTTACAA
>LACR_0027(mtlA) Score=4.1 Pos=-52 [Lactococcus lactis subsp. cremoris SK11]
TTGGTAGCGGTTACAA
>LACR_0030(mtlD) Score=4.4 Pos=-89 [Lactococcus lactis subsp. cremoris SK11]
ATGTAAAAGCTTACAA
>LACR_1939(atpE) Score=4.3 Pos=-135 [Lactococcus lactis subsp. cremoris SK11]
TATCAAACGCTTACAA
>LACR_1054(fdhC) Score=4.3 Pos=-28 [Lactococcus lactis subsp. cremoris SK11]
ATAAATACGCTTTCAG
>LACR_0382(gpmA) Score=4.1 Pos=-118 [Lactococcus lactis subsp. cremoris SK11]
ATAAAAGGGCTTACAG
>LACR_1734(tkt) Score=4 Pos=-62 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACCGTTTTTA
>LACR_1863(manL) Score=4.3 Pos=-87 [Lactococcus lactis subsp. cremoris SK11]
ATGAAAACATTTGCAA
# TF - PipR: LACR_0956
>LACR_0956(pipR) Score=5.3 Pos=-146 [Lactococcus lactis subsp. cremoris SK11]
TATGGACACAACGTCCAAA
# TF - PerR: LACR_1568
>LACR_1568(perR) Score=5.8 Pos=-114 [Lactococcus lactis subsp. cremoris SK11]
TTAGAATCATTCTAA
>LACR_1568(perR) Score=5.9 Pos=-91 [Lactococcus lactis subsp. cremoris SK11]
TTAGAATGATTCTAA
# TF - AdcR: LACR_2420
>LACR_2420(adcR) Score=5.9 Pos=-37 [Lactococcus lactis subsp. cremoris SK11]
AATTAACCAGTAAACT
# TF - MntR: LACR_1369
>LACR_1369(mntR) Score=5.1 Pos=-31 [Lactococcus lactis subsp. cremoris SK11]
ATAATTAAATGGAGAAAAGTAA
# TF - PurR: LACR_2590
>LACR_2590(purR) Score=4.4 Pos=6 [Lactococcus lactis subsp. cremoris SK11]
AGAAACGAACGTT
>LACR_1998(ppa) Score=4.5 Pos=-157 [Lactococcus lactis subsp. cremoris SK11]
ATAACCGAACAAA
>LACR_1256(guaC) Score=4.7 Pos=-232 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACGTT
>LACR_1527(bmpA) Score=4.7 Pos=-124 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACGTT
>LACR_1601(purD) Score=4.9 Pos=-266 [Lactococcus lactis subsp. cremoris SK11]
AATTCCGAACAAT
>LACR_1606(hprT) Score=4.7 Pos=-109 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACGTT
>LACR_1894(pbuO) Score=4.7 Pos=-184 [Lactococcus lactis subsp. cremoris SK11]
ATTACCGAACGAT
>LACR_0617(glyA) Score=4.8 Pos=-205 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACAAT
>LACR_0921(folD) Score=4.9 Pos=-53 [Lactococcus lactis subsp. cremoris SK11]
AATTACGAACAAT
>LACR_1007(fhs) Score=4.8 Pos=-134 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACAAT
>LACR_1622(purC) Score=4.8 Pos=-132 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACATT
>LACR_1622(purC) Score=5.1 Pos=-115 [Lactococcus lactis subsp. cremoris SK11]
AAAACCGAACAAT
>LACR_1611(purM) Score=4.8 Pos=-115 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACAAT
>LACR_1605(purH) Score=4.8 Pos=-171 [Lactococcus lactis subsp. cremoris SK11]
ATTTCCGAACAAT
# TF - HrcA: LACR_1025
>LACR_2529(dnaJ) Score=7.9 Pos=-108 [Lactococcus lactis subsp. cremoris SK11]
TTAGCACTCTGATAAAAAGAGTGCTAA
>LACR_1025(hrcA) Score=7 Pos=-61 [Lactococcus lactis subsp. cremoris SK11]
TTAGCACTTAGAGGTAAAGAGTGCTAA
>LACR_1025(hrcA) Score=8.1 Pos=-141 [Lactococcus lactis subsp. cremoris SK11]
TTAGCACTCTAATAAAAAGAGTGCTAA
>LACR_0439(groS) Score=7.1 Pos=-51 [Lactococcus lactis subsp. cremoris SK11]
TTAGCACACAACTATTAAGAGTGCTAA
# TF - HomR
>LACR_0831(metB2) Score=4.8 Pos=-80 [Lactococcus lactis subsp. cremoris SK11]
GACATAGCATTTTCTTATGGC
# TF - BirA: LACR_1952
>LACR_1953(bioY2) Score=7.4 Pos=-98 [Lactococcus lactis subsp. cremoris SK11]
GCAGTTAAC----------------GGTTACTAT
>LACR_1954 Score=7.2 Pos=-136 [Lactococcus lactis subsp. cremoris SK11]
ATAGTAACC----------------GTTAACTGC
# TF - AlsR: LACR_1640
>LACR_1639(alsE) Score=6.5 Pos=-31 [Lactococcus lactis subsp. cremoris SK11]
TTGGGTAATCGTTATCTCAA
>LACR_1640(alsR) Score=6.5 Pos=-182 [Lactococcus lactis subsp. cremoris SK11]
TTGAGATAACGATTACCCAA
# TF - MtlR: LACR_0028
>LACR_0028(mtlR) Score=6.1 Pos=-551 [Lactococcus lactis subsp. cremoris SK11]
TTTGACACAATTGTCGTCACACA
# TF - CodY: LACR_0168
>LACR_1312(ilvD) Score=4.9 Pos=-86 [Lactococcus lactis subsp. cremoris SK11]
AATATTCTGACAAAT
>LACR_0389(oppA1) Score=5.1 Pos=-123 [Lactococcus lactis subsp. cremoris SK11]
AATTGTCAGAAAAAT
>LACR_0390(oppA1) Score=5 Pos=-61 [Lactococcus lactis subsp. cremoris SK11]
AATTTTCTGACAATA
>LACR_0168(codY) Score=5.4 Pos=-101 [Lactococcus lactis subsp. cremoris SK11]
AATTTTCTGACAATT
>LACR_0390(oppA1) Score=4.7 Pos=-129 [Lactococcus lactis subsp. cremoris SK11]
AATTTTCAGAAAACA
>LACR_0389(oppA1) Score=5.2 Pos=-55 [Lactococcus lactis subsp. cremoris SK11]
AATTTTCAGAATAAT
>LACR_1407(gltB) Score=4.9 Pos=-80 [Lactococcus lactis subsp. cremoris SK11]
AATTATCAGAATATA
>LACR_1699(nrgA) Score=5.1 Pos=-61 [Lactococcus lactis subsp. cremoris SK11]
AATATTCAGAAAATA
>LACR_1409(ilvE) Score=4.8 Pos=-97 [Lactococcus lactis subsp. cremoris SK11]
AATTGTTTGAAATTT
>LACR_1336(hisC) Score=4.7 Pos=-309 [Lactococcus lactis subsp. cremoris SK11]
ATAATTCAGATAATT
>LACR_0619(serC) Score=5.6 Pos=-59 [Lactococcus lactis subsp. cremoris SK11]
AATTATCAGAAAATT
>LACR_0783(thrA) Score=5.6 Pos=-71 [Lactococcus lactis subsp. cremoris SK11]
AATTATCTGAAAATT
>LACR_0616(yfjA) Score=4.4 Pos=-82 [Lactococcus lactis subsp. cremoris SK11]
ATTTTGTTGAAAATT
>LACR_2073(pepC) Score=4.8 Pos=-125 [Lactococcus lactis subsp. cremoris SK11]
ATTTTTTTGATAATT
# TF - FruR: LACR_1031
>LACR_1031(fruR) Score=5.4 Pos=-82 [Lactococcus lactis subsp. cremoris SK11]
TGAAAGAAAATGATAGTTAA
>LACR_1031(fruR) Score=5.3 Pos=-62 [Lactococcus lactis subsp. cremoris SK11]
TGATTGATTTTGATAGGTAA
>LACR_1031(fruR) Score=5.8 Pos=-72 [Lactococcus lactis subsp. cremoris SK11]
TGATAGTTAATGATTGATTT
# TF - CtsR: LACR_0665
>LACR_1612(clpB) Score=6.3 Pos=-98 [Lactococcus lactis subsp. cremoris SK11]
AAAAGCTTGACCATTACTGACTAA
>LACR_0700(clpP) Score=6.8 Pos=-110 [Lactococcus lactis subsp. cremoris SK11]
TTTTCTTTGACCTTTTTTGACCAA
>LACR_0439(groS) Score=5.9 Pos=-95 [Lactococcus lactis subsp. cremoris SK11]
TTTCTCTTGACTAAATCTGACCAT
>LACR_0665(ctsR) Score=0.4 Pos=-56 [Lactococcus lactis subsp. cremoris SK11]
ATAGTCAGTAATAGTCAAAGATTA
>LACR_0577(yffA) Score=-0.4 Pos=-119 [Lactococcus lactis subsp. cremoris SK11]
ATGGTCAAATATGGTCAAGCTTTT
# TF - LacR: LACR_D07
>LACR_D06(lacA) Score=8.6 Pos=-214 [Lactococcus lactis subsp. cremoris SK11]
AACAAATAA-AAAAAACAA
>LACR_D07(lacR) Score=-1.4 Pos=-105 [Lactococcus lactis subsp. cremoris SK11]
TTGTTTGAA-TTGTTTGTT
# TF - GntR1: LACR_2498
>LACR_2498(gntR1) Score=5.6 Pos=-291 [Lactococcus lactis subsp. cremoris SK11]
TTTGTAAAATATTTTCTGA
>LACR_2497(gntZ1) Score=5.6 Pos=-96 [Lactococcus lactis subsp. cremoris SK11]
TCAGAAAATATTTTACAAA
>LACR_0642(gntZ2) Score=5.7 Pos=-98 [Lactococcus lactis subsp. cremoris SK11]
TATGTAAAACATTTACACA
# TF - TreR (RgrA): LACR_0480
>LACR_0481(treP) Score=7.2 Pos=-39 [Lactococcus lactis subsp. cremoris SK11]
TTAACTTGTACGTACAACTGCA
>LACR_0480(treR) Score=7.2 Pos=-108 [Lactococcus lactis subsp. cremoris SK11]
TGCAGTTGTACGTACAAGTTAA
# TF - UxuR: LACR_1747
>LACR_1747(uxuR) Score=7 Pos=-365 [Lactococcus lactis subsp. cremoris SK11]
AAAGTGATATATCAGTTT
>LACR_1746(uxuB) Score=7 Pos=-36 [Lactococcus lactis subsp. cremoris SK11]
AAACTGATATATCACTTT
# TF - BusR: LACR_1543
>LACR_1542(busA) Score=7.9 Pos=-155 [Lactococcus lactis subsp. cremoris SK11]
AGTGACTACATATTGTTATTATTGAGTGGTCACT
# TF - MleR: LACR_0942
>LACR_0942(mleR) Score=5.3 Pos=-68 [Lactococcus lactis subsp. cremoris SK11]
ATAAATATTACTTAT
# TF - FlpA: LACR_1045
>LACR_1043(copZ) Score=6 Pos=-76 [Lactococcus lactis subsp. cremoris SK11]
TAATTGATACAAATCAATTT
>LACR_1042(cadA) Score=5.8 Pos=-75 [Lactococcus lactis subsp. cremoris SK11]
TTATTGACAGAAATCAATTT
# TF - YxeR: LACR_0688
>LACR_0688(yxeR) Score=6.9 Pos=-40 [Lactococcus lactis subsp. cremoris SK11]
TAAATGACATAGTGTCATAAA
# TF - FlrR: LACR_1608
>LACR_1608(flrR) Score=5.7 Pos=-96 [Lactococcus lactis subsp. cremoris SK11]
CGTTACACTTGAAACT