# TF - HisR: DORLON_01427
>DORLON_01427(hisR) Score=5.3 Pos=24 [Dorea longicatena DSM 13814]
GAATTTAGTGTGTTAAAATG
>DORLON_00748(hisX) Score=5.2 Pos=-94 [Dorea longicatena DSM 13814]
GATTTTAGTGTGATAAAGTA
>DORLON_00474(hisZ) Score=5 Pos=-50 [Dorea longicatena DSM 13814]
CATGGTAGCACACTAAAGTA
# TF - NiaR: DORLON_01087
>DORLON_01089(nadB) Score=6.1 Pos=-123 [Dorea longicatena DSM 13814]
AACAATTGTCTTGTCACATGTA
>DORLON_02159(niaY) Score=6.4 Pos=-98 [Dorea longicatena DSM 13814]
GACATGTGACAAGACACATGTA
# TF - HrcA: DORLON_01874
>DORLON_02814(htpG) Score=7.4 Pos=-171 [Dorea longicatena DSM 13814]
TTAGCACTCTTTTTAAAAGAGTGCTAA
>DORLON_01663(groEL) Score=7 Pos=-383 [Dorea longicatena DSM 13814]
TCAGCACTCTCTTTTGTTGAGTGCTAA
>DORLON_01664(groES) Score=7 Pos=-59 [Dorea longicatena DSM 13814]
TCAGCACTCTCTTTTGTTGAGTGCTAA
>DORLON_01874(hrcA) Score=7.2 Pos=-74 [Dorea longicatena DSM 13814]
TTAGCACTCAGATAAAAAGAGTGCTAA
>DORLON_00596(hsp20) Score=7.4 Pos=-163 [Dorea longicatena DSM 13814]
TTAGCACTCACTATTGACGAGTGCTAA
>DORLON_02781(hsp20) Score=7.3 Pos=-207 [Dorea longicatena DSM 13814]
TTAGCACTCACCTATTGACAGTGCTAA
>DORLON_02510(hsp20) Score=7.3 Pos=-184 [Dorea longicatena DSM 13814]
TTAGCACTCACCTCTAGACAGTGCTAA
>DORLON_02511(clpB) Score=6.5 Pos=-84 [Dorea longicatena DSM 13814]
TTAGCACTCGGGGGTTGACAGTGCTAA
# TF - ArgR: DORLON_00442
>DORLON_01501(argG) Score=5 Pos=-199 [Dorea longicatena DSM 13814]
ATGCATATTTTTGCAT
>DORLON_01501(argG) Score=5.4 Pos=-147 [Dorea longicatena DSM 13814]
TTGCATAATTATAAAA
>DORLON_01497(argC) Score=5.1 Pos=-157 [Dorea longicatena DSM 13814]
ATGTATACTTATGCAA
>DORLON_01497(argC) Score=4.8 Pos=-38 [Dorea longicatena DSM 13814]
ATTTATAAAAATTCAA
# TF - Rex: DORLON_00639
>DORLON_02221(adhE) Score=5.3 Pos=-117 [Dorea longicatena DSM 13814]
ATGTTAAAAAAATATCAA
>DORLON_02221(adhE) Score=4.9 Pos=-97 [Dorea longicatena DSM 13814]
ATGTGAAAAAAATATCAA
>DORLON_02221(adhE) Score=4.8 Pos=-72 [Dorea longicatena DSM 13814]
TTGACAAAGAATTAACAA
>DORLON_02222(stpK) Score=5.5 Pos=-144 [Dorea longicatena DSM 13814]
ATGTTAAAAAAATAACAA
>DORLON_02222(stpK) Score=4.7 Pos=-106 [Dorea longicatena DSM 13814]
TAGTGAAAAAAATATCAA
>DORLON_00585(bdh) Score=4.5 Pos=-110 [Dorea longicatena DSM 13814]
ATATTAAAAAAATCACAA
>DORLON_00585(bdh) Score=4.5 Pos=-44 [Dorea longicatena DSM 13814]
GTGTTAAAAGATTAACAC
>DORLON_02552(ladH) Score=5 Pos=-231 [Dorea longicatena DSM 13814]
AAGTTATTTATATAACAA
>DORLON_02552(ladH) Score=4.7 Pos=-102 [Dorea longicatena DSM 13814]
TTGTTAAAATAAAGACAT
>DORLON_00700(aroE) Score=4.8 Pos=-53 [Dorea longicatena DSM 13814]
TTGTTAAAATATAAGCAA
# TF - LexA: DORLON_00532
>DORLON_02453(recA) Score=4.8 Pos=-38 [Dorea longicatena DSM 13814]
ACGAACACTCGTTCGA
>DORLON_00532(lexA) Score=4.6 Pos=-178 [Dorea longicatena DSM 13814]
ACGAACATGTGTTCCT
>DORLON_00532(lexA) Score=5 Pos=-142 [Dorea longicatena DSM 13814]
TCGAACACATGTTTGT
>DORLON_00532(lexA) Score=4.9 Pos=-105 [Dorea longicatena DSM 13814]
TCGAACATATTTTCTA
>DORLON_02750(COG4277) Score=5.1 Pos=-58 [Dorea longicatena DSM 13814]
AAGAACGAATGTTCGA
>DORLON_02750(COG4277) Score=4.7 Pos=-27 [Dorea longicatena DSM 13814]
AAGAACACTTGTTTGT
# RNA - TPP
>DORLON_02556(thiM) Score=36.4 Pos=-280 [Dorea longicatena DSM 13814]
GAAAAGGGGAGTCCGTAATCTGAGCGGGCTGAGAGTAGACTAAAGATGTCTTGACCCGGGAAACTGATTTGGATCATGCCAACGTAGGGAAAGAAAAGTTGCCGACAGG
>DORLON_00841(thiW) Score=55.3 Pos=-445 [Dorea longicatena DSM 13814]
TATAAACAGGGGGGAGCTGGAGAAAACCGGCTGAGAGGAAGCGTAATTCCGTTTCGACCCTTTACCTGATTTGGATAATGCCAACGGAGGGATTCATACCATGTATTGATT
>DORLON_01209(thiS) Score=67.3 Pos=-327 [Dorea longicatena DSM 13814]
TAGATAAAACACGGGGAGCTTGTGTACCAGGCTGAGAGGAAGTTAAGAACTTCGACCCATATACCTGATTTGGATAATGCCAACGTAGGAATGTATAACGTAGATTTT
# RNA - FMN
>DORLON_02764(ribD) Score=111.5 Pos=-280 [Dorea longicatena DSM 13814]
ACGAAATCTTCAGGGCAGGGTGCGATTCCCTACCGGCGGTAAAGCCCGCGGGCCGAGAGGCATGATCCGGTGTGATTCCGGAGCCGACAGTATAGTCTGGATGAAAGAAGATGATG
>DORLON_02252(ribU) Score=101.3 Pos=-315 [Dorea longicatena DSM 13814]
AGATTCTTCGGGGCAGGGTGTGATTCCCAACCGGCGGTAAAGTCCGCGAACTGGTCATTTGAAGAATTTCTGGTCAGAGATATCTGAACAGATGTTATCAATGTGATGATCAGCCGATTTGGTGAGATTCCAGAACCGACAGTAAAGTCTGGATGAGAGAAGGATGATAC
# TF - BirA: DORLON_00878
>DORLON_02721(bioB) Score=8.6 Pos=-65 [Dorea longicatena DSM 13814]
ATGTTAAC---------------GTTAACAA
>DORLON_01236(bioY) Score=8.9 Pos=-88 [Dorea longicatena DSM 13814]
TTGTAAAC---------------GTTGACAA
>DORLON_00987(bioY) Score=8.7 Pos=-123 [Dorea longicatena DSM 13814]
TTGTTAAC---------------GTTGACAT
# TF - PdxR: DORLON_02845
>DORLON_00259(pdxS) Score=12.1 Pos=-56 [Dorea longicatena DSM 13814]
AACTGGTAT-(15)-AACTGGATG-(8)-ATACCAGAT
>DORLON_00405(pdxU) Score=10.2 Pos=-63 [Dorea longicatena DSM 13814]
AACTGGTAT-(15)-AACTGGCTC-(8)-ATGCCACTA
>DORLON_01651(pdxU) Score=10.8 Pos=-142 [Dorea longicatena DSM 13814]
AACTGGCCT-(15)-AACTGGCTG-(8)-CATCCACTT
# TF - IscR: DORLON_02444
>DORLON_02444(iscR) Score=5.4 Pos=-43 [Dorea longicatena DSM 13814]
AAAAATCCTAGTAAAATACTGGGGATTAA
# TF - DtxR: DORLON_00214
>DORLON_00209(PF09605) Score=5.7 Pos=-60 [Dorea longicatena DSM 13814]
GGTTAGAACACTCTAACC
# TF - CzrA: DORLON_02325
>DORLON_02327(PF00403) Score=7.3 Pos=-62 [Dorea longicatena DSM 13814]
CATATGAATAACTGTTCATATA
# TF - Fur: DORLON_00352
>DORLON_00357(PF12672) Score=4.6 Pos=-125 [Dorea longicatena DSM 13814]
AATGAGGATTTATGTCATT
>DORLON_00403(PF10087) Score=5.6 Pos=-104 [Dorea longicatena DSM 13814]
ATTGAGAAAAGTTTTCAAT
>DORLON_02935(feoB2) Score=4.9 Pos=-113 [Dorea longicatena DSM 13814]
GTTGACAAAAATTATCGAT
>DORLON_02935(feoB2) Score=5.4 Pos=-73 [Dorea longicatena DSM 13814]
GTTGAGAAATATTATCAGT
>DORLON_00346(BACPEC_02635) Score=5.5 Pos=-88 [Dorea longicatena DSM 13814]
AATGAAAACATTTATCATT
>DORLON_00353(BACPEC_03058) Score=5.9 Pos=-148 [Dorea longicatena DSM 13814]
GTTGATAAAATTTATCAAT
# TF - IdeR: DORLON_00345
>DORLON_00345(ideR) Score=6.3 Pos=-156 [Dorea longicatena DSM 13814]
ATAGTTAGTATATGCTAACGTT
>DORLON_00346 Score=6.7 Pos=-120 [Dorea longicatena DSM 13814]
AACGTTAGCATATACTAACTAT
>DORLON_00403(PF10087) Score=4.9 Pos=-48 [Dorea longicatena DSM 13814]
TTAGTTAGATAAAGCTAACTAA
>DORLON_00359(eno) Score=4.4 Pos=-108 [Dorea longicatena DSM 13814]
AAAGATATGATATGCTGACGAT
>DORLON_00359(eno) Score=6.4 Pos=-88 [Dorea longicatena DSM 13814]
ATAGTTAGAATAATCTAACTAT
# TF - NrdR: DORLON_01175
>DORLON_00953(nrdD) Score=4.6 Pos=-102 [Dorea longicatena DSM 13814]
GCACAATATCTTGTGC
>DORLON_00953(nrdD) Score=5 Pos=-70 [Dorea longicatena DSM 13814]
AAACAATATTTAGTAG
>DORLON_01167(COG0345) Score=3.8 Pos=-74 [Dorea longicatena DSM 13814]
ACATAACAGATTGTTT