# TF - ZntR: Shal_0489
>Shal_0489(zntR) Score=6.8 Pos=-115 [Shewanella halifaxensis HAW-EB4]
ACCTTGGATACAACTCCAAGGT
# TF - XltR: Shal_2007
>Shal_2007(xltR) Score=6.3 Pos=-148 [Shewanella halifaxensis HAW-EB4]
AAATGACATCGATAACATTT
>Shal_2007(xltR) Score=6 Pos=-312 [Shewanella halifaxensis HAW-EB4]
TTATGTTATCGATGTCATTA
>Shal_2008(xltF) Score=6 Pos=-42 [Shewanella halifaxensis HAW-EB4]
TAATGACATCGATAACATAA
>Shal_2008(xltF) Score=6.3 Pos=-206 [Shewanella halifaxensis HAW-EB4]
AAATGTTATCGATGTCATTT
# TF - TyrR: Shal_1533
>Shal_2901(liuR) Score=4.4 Pos=-110 [Shewanella halifaxensis HAW-EB4]
GTGGCAAGCGCGATTGACAT
>Shal_1533(tyrR) Score=4.1 Pos=-159 [Shewanella halifaxensis HAW-EB4]
CTGTAAACAAGCCTTGCCAC
>Shal_1534(hmgC) Score=4.7 Pos=-183 [Shewanella halifaxensis HAW-EB4]
CTGTAAGTATAAGTTTACAA
>Shal_3175(pepD) Score=4.6 Pos=-160 [Shewanella halifaxensis HAW-EB4]
GTGGAAACTTTGCCTGACAA
>Shal_4179(Sfri_3409) Score=4.5 Pos=-61 [Shewanella halifaxensis HAW-EB4]
AAGTCAAGCTTACTTTACAT
>Shal_0859(brnQ) Score=5.1 Pos=-94 [Shewanella halifaxensis HAW-EB4]
GTGTAAACTAATCATTACAC
>Shal_4179(Sfri_3409) Score=3.9 Pos=-105 [Shewanella halifaxensis HAW-EB4]
AAGTAAAGCATGCTTGACTT
>Shal_1352(aceB) Score=4.1 Pos=-458 [Shewanella halifaxensis HAW-EB4]
aTGTAAAagTAtATTgACgC
>Shal_2042(tyrB) Score=3.4 Pos=-243 [Shewanella halifaxensis HAW-EB4]
TCGTAGATATAAAGTTACTC
>Shal_2751(mdeA) Score=4.4 Pos=-214 [Shewanella halifaxensis HAW-EB4]
TTGTAACATTCAGTTTACAA
>Shal_3258(pep3) Score=3.9 Pos=-202 [Shewanella halifaxensis HAW-EB4]
TAGGAAACCTTTTCTTACAC
>Shal_1531(phhA) Score=4.3 Pos=-133 [Shewanella halifaxensis HAW-EB4]
GTGTAACAACTTCGTTACAC
>Shal_2878(ivdA) Score=4.4 Pos=-231 [Shewanella halifaxensis HAW-EB4]
GTGTAAATCCTTTGTGACAT
>Shal_2234(bkdA1) Score=4.8 Pos=-161 [Shewanella halifaxensis HAW-EB4]
ATGTAAACCAATATATACAT
>Shal_1711(ldh) Score=4.9 Pos=-157 [Shewanella halifaxensis HAW-EB4]
GTGGAAAGCAAAATTGCCAG
# TF - TrpR: Shal_1111
>Shal_1111(trpR) Score=5.1 Pos=-47 [Shewanella halifaxensis HAW-EB4]
CGTAATGACGCACTAGTACG
>Shal_1101(aroF) Score=6.3 Pos=-134 [Shewanella halifaxensis HAW-EB4]
TGTAATGGTGTACCGTTACG
# TF - SO4705: Shal_2297
>Shal_2296(SO4706) Score=6.9 Pos=-113 [Shewanella halifaxensis HAW-EB4]
TTGTAATAAAATTTACACTAGACTACAA
>Shal_2297(SO4705) Score=6.9 Pos=-65 [Shewanella halifaxensis HAW-EB4]
TTGTAGTCTAGTGTAAATTTTATTACAA
# TF - SO4326: Shal_3931
>Shal_3931(vexR) Score=7.6 Pos=15 [Shewanella halifaxensis HAW-EB4]
ATGAATGAACGTTCATTCAT
# TF - SO3277: Shal_1389
>Shal_1388(SO3278) Score=6.5 Pos=-105 [Shewanella halifaxensis HAW-EB4]
AATGGACTGGACAGTCTAGT
>Shal_1389(SO3277) Score=6.5 Pos=-109 [Shewanella halifaxensis HAW-EB4]
ACTAGACTGTCCAGTCCATT
>Shal_1389(SO3277) Score=6.4 Pos=-137 [Shewanella halifaxensis HAW-EB4]
ACTAGACTGCCTAGTCTAGT
>Shal_1388(SO3278) Score=6.4 Pos=-77 [Shewanella halifaxensis HAW-EB4]
ACTAGACTAGGCAGTCTAGT
# TF - SO1415: Shal_3965
>Shal_3970(SO1410) Score=6.3 Pos=-156 [Shewanella halifaxensis HAW-EB4]
ATTCGCGACTTGGCTCACGAAT
>Shal_3965(SO1415) Score=6.7 Pos=-247 [Shewanella halifaxensis HAW-EB4]
ATTCGTGAGGCAGCTCTCGAAT
>Shal_3966(SO1414) Score=6.7 Pos=-119 [Shewanella halifaxensis HAW-EB4]
ATTCGAGAGCTGCCTCACGAAT
# TF - SdaR: Shal_2789
>Shal_2799(grtP) Score=5.9 Pos=-190 [Shewanella halifaxensis HAW-EB4]
AACTGTGCGCACGCACAATA
# TF - RbsR: Shal_0583
>Shal_0578(rbsD) Score=6.2 Pos=-113 [Shewanella halifaxensis HAW-EB4]
ATATCGAAACGTTTCGATTA
>Shal_0578(rbsD) Score=6.3 Pos=-80 [Shewanella halifaxensis HAW-EB4]
TTATCGAAACGTTTCGATCG
# TF - PUR
>Shal_3375(gcvT) Score=5.6 Pos=-144 [Shewanella halifaxensis HAW-EB4]
TATAATTTCGCCGCATTTTA
>Shal_1376(guaB) Score=4.3 Pos=-56 [Shewanella halifaxensis HAW-EB4]
TATAATCTCGCCGCAATATT
>Shal_3137(tsx) Score=5.3 Pos=-81 [Shewanella halifaxensis HAW-EB4]
TAAAATGCGGCACCATAAAA
>Shal_1680(purM) Score=5.4 Pos=-59 [Shewanella halifaxensis HAW-EB4]
TAGAATGACGCCGCATAAAA
# TF - PsrA: Shal_1945
>Shal_3395(fadD2) Score=4.8 Pos=-62 [Shewanella halifaxensis HAW-EB4]
gTcTAAACAGCTGTTTgAcT
>Shal_2671(fadI) Score=5.4 Pos=-151 [Shewanella halifaxensis HAW-EB4]
AAACAAACAAGTGTTTAAAA
>Shal_0016(fadB) Score=5.5 Pos=-168 [Shewanella halifaxensis HAW-EB4]
AACCAAACGACCGTTTAAAT
>Shal_2030(fadH) Score=5.4 Pos=-18 [Shewanella halifaxensis HAW-EB4]
TTTAAAAAGGATGTTTGAAT
>Shal_1945(psrA) Score=5.9 Pos=-25 [Shewanella halifaxensis HAW-EB4]
ATTTAAACGAGTGTTTAAAA
>Shal_2614(SO2935) Score=4.9 Pos=-73 [Shewanella halifaxensis HAW-EB4]
TTTAAAACAGCTGTTTATCA
>Shal_0066(SO0080) Score=5.6 Pos=-47 [Shewanella halifaxensis HAW-EB4]
AATTAAACAGCTGTTTAAAC
>Shal_3598(SO0881) Score=5.9 Pos=-146 [Shewanella halifaxensis HAW-EB4]
ATTAAAACGTATGTTTAATT
>Shal_1266(fadE3) Score=5.7 Pos=-98 [Shewanella halifaxensis HAW-EB4]
ATCCAAACAAGCGTTTAAAT
>Shal_0121(etfD) Score=5.1 Pos=-79 [Shewanella halifaxensis HAW-EB4]
ATTAAAACACCCGTTTATAG
>Shal_3661(echH) Score=5.2 Pos=-79 [Shewanella halifaxensis HAW-EB4]
GGTTAAACAGTTGTTTGAAT
>Shal_1352(aceB) Score=5.6 Pos=-592 [Shewanella halifaxensis HAW-EB4]
GTTTAAACGGTTGTTTGAAT
>Shal_2494(gltA) Score=5.7 Pos=-101 [Shewanella halifaxensis HAW-EB4]
ATTTAAACGCTTATTTAAAT
>Shal_2054(acdH) Score=5.7 Pos=-40 [Shewanella halifaxensis HAW-EB4]
TTTGAAACAACTGTTTAAAT
>Shal_2493(sdhC) Score=5.7 Pos=-350 [Shewanella halifaxensis HAW-EB4]
ATTTAAATAAGCGTTTAAAT
>Shal_1890(fadE2) Score=6 Pos=-154 [Shewanella halifaxensis HAW-EB4]
ATTTAAACATTTGTTTAATT
>Shal_1832(fadD1) Score=5.5 Pos=-136 [Shewanella halifaxensis HAW-EB4]
ATTTAAACGCTCGTATGATT
>Shal_2030(fadH) Score=5 Pos=-31 [Shewanella halifaxensis HAW-EB4]
ATTGAATCACTTGTTTAAAA
# TF - PrpR: Shal_1960
>Shal_1960(prpR) Score=5.9 Pos=-41 [Shewanella halifaxensis HAW-EB4]
ATTGTCGACAAT
>Shal_1960(prpR) Score=5.2 Pos=-71 [Shewanella halifaxensis HAW-EB4]
ATTGTTGACAAT
>Shal_1960(prpR) Score=5.5 Pos=-93 [Shewanella halifaxensis HAW-EB4]
TTTGTCGACAAT
# TF - PflR: Shal_2589
>Shal_2589(pflR) Score=5.8 Pos=-62 [Shewanella halifaxensis HAW-EB4]
CATCAATTTTATTGATA
>Shal_2590(focA) Score=5.1 Pos=-158 [Shewanella halifaxensis HAW-EB4]
CATCAGGATATTTGATA
>Shal_2591(pflX) Score=5.2 Pos=-276 [Shewanella halifaxensis HAW-EB4]
ATTCAAGAATATTGATA
# TF - PdhR: Shal_0475
>Shal_0628(deaD) Score=6 Pos=-142 [Shewanella halifaxensis HAW-EB4]
GATTGGTATTACCAATT
>Shal_1235(oadG) Score=4.7 Pos=-196 [Shewanella halifaxensis HAW-EB4]
TTATGGTACGACCAATT
>Shal_0475(pdhR) Score=6.4 Pos=-39 [Shewanella halifaxensis HAW-EB4]
AATTGGTAAGACCAATT
>Shal_0475(pdhR) Score=4.4 Pos=-157 [Shewanella halifaxensis HAW-EB4]
CATTGGTCTGACCCCTA
>Shal_2592(pflB) Score=6.4 Pos=-238 [Shewanella halifaxensis HAW-EB4]
AATTGGTCTTACCAATT
>Shal_2591(pflX) Score=6.4 Pos=-216 [Shewanella halifaxensis HAW-EB4]
AATTGGTCTTACCAATT
# TF - NtrC: Shal_0341
>Shal_0888(glnB) Score=4.7 Pos=-137 [Shewanella halifaxensis HAW-EB4]
CGCACTCGAATGGTGCA
>Shal_0353(glnA) Score=5.4 Pos=-180 [Shewanella halifaxensis HAW-EB4]
CGCACCAAAATAGTGCG
>Shal_0342(ntrB) Score=5.8 Pos=-66 [Shewanella halifaxensis HAW-EB4]
TGCACCATAGTGGTGCG
>Shal_0342(ntrB) Score=6 Pos=-79 [Shewanella halifaxensis HAW-EB4]
TGCACCACTTTGGTGCA
# TF - NsrR: Shal_0039
>Shal_1103(hcp) Score=5.6 Pos=-13 [Shewanella halifaxensis HAW-EB4]
ACATGTAAATAATATGCATGA
# TF - NrdR: Shal_1204
>Shal_2036(nrdA) Score=4.2 Pos=-163 [Shewanella halifaxensis HAW-EB4]
ACCATATATAGTGTGT
>Shal_2036(nrdA) Score=5.2 Pos=-165 [Shewanella halifaxensis HAW-EB4]
ACACCATATATAGTGT
>Shal_2692(nrdD) Score=5.1 Pos=-50 [Shewanella halifaxensis HAW-EB4]
GCACTATATATAGTGT
>Shal_2692(nrdD) Score=4.1 Pos=-81 [Shewanella halifaxensis HAW-EB4]
ACGCCACATATTGTGA
# TF - NorR: Shal_3555
>Shal_3554(norB) Score=4.1 Pos=-165 [Shewanella halifaxensis HAW-EB4]
CGTTATCAAATAGACAGCT
>Shal_3554(norB) Score=4.5 Pos=-186 [Shewanella halifaxensis HAW-EB4]
AGATGTCAATTCGACAAAG
>Shal_3555(norR) Score=4.3 Pos=-86 [Shewanella halifaxensis HAW-EB4]
TACTGTAAAAAAGACAGCA
>Shal_3554(norB) Score=5.3 Pos=-142 [Shewanella halifaxensis HAW-EB4]
CACAGTCAAAATGACAACA
>Shal_3740(norV) Score=4 Pos=-144 [Shewanella halifaxensis HAW-EB4]
TGCTATCAAAAAGACATTG
>Shal_3740(norV) Score=4.8 Pos=-188 [Shewanella halifaxensis HAW-EB4]
GACTGTCTTAATGACATTT
>Shal_3740(norV) Score=4.9 Pos=-168 [Shewanella halifaxensis HAW-EB4]
TACGGTCATTTTGACTGTT
# TF - NhaR: Shal_1073
>Shal_2201(ccoH) Score=5.3 Pos=-114 [Shewanella halifaxensis HAW-EB4]
CCTCGTCATTAACGAGG
>Shal_1071(nhaA) Score=4.6 Pos=-97 [Shewanella halifaxensis HAW-EB4]
CTTCGGATATCCCGATG
>Shal_1071(nhaA) Score=4.7 Pos=-292 [Shewanella halifaxensis HAW-EB4]
CTTCGATTTTTTCGAGT
# TF - NagR: Shal_1144
>Shal_1148(hex) Score=6.1 Pos=-344 [Shewanella halifaxensis HAW-EB4]
CATGACAGCGTTGTCATC
>Shal_1145(omp_nag) Score=6.2 Pos=-78 [Shewanella halifaxensis HAW-EB4]
CATGACAGCGTTGTCATT
>Shal_1147(sapC) Score=6.1 Pos=-149 [Shewanella halifaxensis HAW-EB4]
ATTGACAACGTTGTCACT
>Shal_0813(nagB) Score=6.4 Pos=-84 [Shewanella halifaxensis HAW-EB4]
AATGACAGCGTTGTCATT
>Shal_1152(nagP) Score=6.1 Pos=-199 [Shewanella halifaxensis HAW-EB4]
AATGACAGCGTTGTCTTT
>Shal_1149(nagK) Score=6.4 Pos=-124 [Shewanella halifaxensis HAW-EB4]
AATGACAACGCTGTCATT
# TF - LldR: Shal_1215
>Shal_3085(lldE) Score=5.8 Pos=-168 [Shewanella halifaxensis HAW-EB4]
TAAATTAGCACTACTTTTTAC
# TF - LiuR: Shal_2901
>Shal_1061(gltB) Score=6.2 Pos=-185 [Shewanella halifaxensis HAW-EB4]
GTTTACGTTAAGGTAAAC
>Shal_2234(bkdA1) Score=6.2 Pos=-92 [Shewanella halifaxensis HAW-EB4]
GTTTACGTTAACGTAATG
>Shal_2945(etfB) Score=5.7 Pos=-120 [Shewanella halifaxensis HAW-EB4]
GTTGACGTTAACGTTAAC
>Shal_2878(ivdA) Score=5.9 Pos=-168 [Shewanella halifaxensis HAW-EB4]
CTTTACGTTCGCGTAAAC
>Shal_2901(liuR) Score=6 Pos=-62 [Shewanella halifaxensis HAW-EB4]
CTTTACCTTTACGTAAAC
>Shal_1114(thrA) Score=5.2 Pos=-368 [Shewanella halifaxensis HAW-EB4]
GTTTACGTAAGCGTAACT
>Shal_1352(aceB) Score=4.9 Pos=-609 [Shewanella halifaxensis HAW-EB4]
GTTAACGTAAACGTTAGG
>Shal_1711(ldh) Score=6.5 Pos=-174 [Shewanella halifaxensis HAW-EB4]
CTTTACGTTAACGTAAAG
# TF - IscR: Shal_1571
>Shal_1571(iscR) Score=4.5 Pos=-90 [Shewanella halifaxensis HAW-EB4]
ATACCTGACCAAATAGCTAGGCTTA
>Shal_1571(iscR) Score=6 Pos=-65 [Shewanella halifaxensis HAW-EB4]
ATACTTGACTGAAACGGTCGGGTAT
>Shal_3986(ygbA) Score=5.1 Pos=-28 [Shewanella halifaxensis HAW-EB4]
ATAACCCAGTAACTTACTAAGGTAT
>Shal_0247(nfuA) Score=4.5 Pos=-47 [Shewanella halifaxensis HAW-EB4]
AATTCTTACTAAAACACTCAGGTTT
>Shal_3908(dnrN) Score=5.7 Pos=-104 [Shewanella halifaxensis HAW-EB4]
TTACTTGAGCATTTTACTCAGGTAA
>Shal_1036(erpA) Score=5.7 Pos=-64 [Shewanella halifaxensis HAW-EB4]
TTACTTGAACAAAACACTCAGGTAT
# TF - IlvY: Shal_3946
>Shal_3945(ilvC) Score=5 Pos=-138 [Shewanella halifaxensis HAW-EB4]
ATTGCAAAAAACGCAAC
>Shal_3945(ilvC) Score=4.9 Pos=-107 [Shewanella halifaxensis HAW-EB4]
ATATCATTTTAAGCAAT
>Shal_3946(ilvY) Score=4.9 Pos=-93 [Shewanella halifaxensis HAW-EB4]
ATTGCTTAAAATGATAT
>Shal_3946(ilvY) Score=5 Pos=-62 [Shewanella halifaxensis HAW-EB4]
GTTGCGTTTTTTGCAAT
# TF - HypR: Shal_2558
>Shal_3252(COG2423) Score=4.6 Pos=-32 [Shewanella halifaxensis HAW-EB4]
ATAGTATAAAAT
>Shal_2548(ampP) Score=3.7 Pos=-77 [Shewanella halifaxensis HAW-EB4]
AAAGTATACACT
>Shal_3056(colA1) Score=5.1 Pos=-5 [Shewanella halifaxensis HAW-EB4]
ATTGTATGCAAA
>Shal_1895(pdtP) Score=4.5 Pos=-26 [Shewanella halifaxensis HAW-EB4]
AATGTATAAAAT
>Shal_0974(prdP) Score=3.6 Pos=-125 [Shewanella halifaxensis HAW-EB4]
TTTGTATATTTT
>Shal_2840(colA3) Score=4.5 Pos=-170 [Shewanella halifaxensis HAW-EB4]
ATTGTATAAATT
>Shal_0031(colA2) Score=4.7 Pos=-43 [Shewanella halifaxensis HAW-EB4]
ATTGTATTCAAT
>Shal_2555(hypD) Score=3.9 Pos=-65 [Shewanella halifaxensis HAW-EB4]
TGCGTATACAAT
>Shal_2558(hypR) Score=3.6 Pos=-29 [Shewanella halifaxensis HAW-EB4]
CTTGTATAAATA
>Shal_2554(hypE2) Score=5.3 Pos=95 [Shewanella halifaxensis HAW-EB4]
ATTGTATACAAT
>Shal_2554(hypE2) Score=3.9 Pos=14 [Shewanella halifaxensis HAW-EB4]
ATTGTATACGCA
>Shal_2555(hypD) Score=5.3 Pos=-146 [Shewanella halifaxensis HAW-EB4]
ATTGTATACAAT
>Shal_3585(putA) Score=5.4 Pos=-68 [Shewanella halifaxensis HAW-EB4]
ATTGTATACAAA
# TF - HutC: Shal_0072
>Shal_0071(hutI) Score=4.1 Pos=-99 [Shewanella halifaxensis HAW-EB4]
ATACAAGTAAATACAAGCGG
>Shal_0071(hutI) Score=6.5 Pos=-109 [Shewanella halifaxensis HAW-EB4]
TAGCTTGTATATACAAGTAA
>Shal_0072(hutC) Score=5 Pos=-96 [Shewanella halifaxensis HAW-EB4]
CCGCTTGTATTTACTTGTAT
>Shal_0072(hutC) Score=6.1 Pos=-86 [Shewanella halifaxensis HAW-EB4]
TTACTTGTATATACAAGCTA
# TF - HmgQ: Shal_2408
>Shal_2409(hmgA) Score=5.1 Pos=-42 [Shewanella halifaxensis HAW-EB4]
ATCAATTAAATAGAT
>Shal_2409(hmgA) Score=5.4 Pos=-124 [Shewanella halifaxensis HAW-EB4]
ATCTAAAAATTCGAT
>Shal_2408(hmgQ) Score=5.4 Pos=-46 [Shewanella halifaxensis HAW-EB4]
ATCGAATTTTTAGAT
# TF - HexR: Shal_1948
>Shal_2855(nupC2) Score=5.1 Pos=-361 [Shewanella halifaxensis HAW-EB4]
cTGTAATTAAATTAgAt
>Shal_3174(SO1118) Score=5.6 Pos=-191 [Shewanella halifaxensis HAW-EB4]
TTGTAATAAAATTACAG
>Shal_3174(SO1118) Score=4.3 Pos=-244 [Shewanella halifaxensis HAW-EB4]
TTGTAGTTGAATTACCT
>Shal_2076(gapA2) Score=4.6 Pos=-53 [Shewanella halifaxensis HAW-EB4]
TGGTAATTTTACTACCA
>Shal_2632(mcp1) Score=4.9 Pos=-164 [Shewanella halifaxensis HAW-EB4]
GTGTAATTTATTTACAT
>Shal_1196(adhB) Score=4.2 Pos=-166 [Shewanella halifaxensis HAW-EB4]
ACGTCATAAAACTACAA
>Shal_2076(gapA2) Score=4.4 Pos=-128 [Shewanella halifaxensis HAW-EB4]
GTGTAAAAAAATTACCG
>Shal_2250(adhE) Score=4.2 Pos=-89 [Shewanella halifaxensis HAW-EB4]
GTGTAATTTTTCTTCAT
>Shal_1644(nqrA) Score=4.4 Pos=-108 [Shewanella halifaxensis HAW-EB4]
TTGTTGGTAACTTACAA
>Shal_2250(adhE) Score=4.8 Pos=-153 [Shewanella halifaxensis HAW-EB4]
TGGTTATAAAATTACAG
>Shal_3135(deoA) Score=4.5 Pos=-94 [Shewanella halifaxensis HAW-EB4]
ATGTAACAATATTACGG
>Shal_1122(tal) Score=4.4 Pos=-108 [Shewanella halifaxensis HAW-EB4]
GTGTAATTTTTTTTCAT
>Shal_2899(gnd) Score=4.6 Pos=-134 [Shewanella halifaxensis HAW-EB4]
TAGTAATTAAGTTACCA
>Shal_3375(gcvT) Score=4.2 Pos=-237 [Shewanella halifaxensis HAW-EB4]
ATGTAAAAAGTTTACAT
>Shal_2078(gapB) Score=5.2 Pos=-182 [Shewanella halifaxensis HAW-EB4]
TTCTAATAAAATTACAT
>Shal_1949(zwf) Score=4.8 Pos=-175 [Shewanella halifaxensis HAW-EB4]
TAGTAATTTTATCACAA
>Shal_1949(zwf) Score=5 Pos=-78 [Shewanella halifaxensis HAW-EB4]
CTGTTGTTATATTACAA
>Shal_1352(aceB) Score=4.3 Pos=-436 [Shewanella halifaxensis HAW-EB4]
TTGAAATTTAATAACGG
>Shal_1124(phk) Score=5.8 Pos=-74 [Shewanella halifaxensis HAW-EB4]
TTGTAATAAAATTACAA
>Shal_1705(ppsA) Score=5.5 Pos=-114 [Shewanella halifaxensis HAW-EB4]
TAGTAATAAAATTACAA
>Shal_1948(hexR) Score=4.8 Pos=-155 [Shewanella halifaxensis HAW-EB4]
TTGTGATAAAATTACTA
>Shal_1948(hexR) Score=5 Pos=-252 [Shewanella halifaxensis HAW-EB4]
TTGTAATATAACAACAG
>Shal_1947(pykA) Score=4.7 Pos=-76 [Shewanella halifaxensis HAW-EB4]
TCGTAATTTTACTACAC
# TF - GlmR: Shal_4286
>Shal_4286(glmR) Score=6.1 Pos=-32 [Shewanella halifaxensis HAW-EB4]
TTCTTTCGAATCGAAACTT
# TF - GcvA: Shal_3073
>Shal_3073(gcvA) Score=5.6 Pos=-38 [Shewanella halifaxensis HAW-EB4]
ATTAGAAAAACTAAT
>Shal_1186(SO3342) Score=5.1 Pos=-96 [Shewanella halifaxensis HAW-EB4]
ATTAGAAAATATAAT
>Shal_1686(SO2753) Score=5.1 Pos=-84 [Shewanella halifaxensis HAW-EB4]
ATAAGATTATCTCAT
>Shal_1608(sdaA) Score=5.3 Pos=-244 [Shewanella halifaxensis HAW-EB4]
ATTAGCTTATCTAAT
>Shal_0823(sdaC) Score=5.3 Pos=-399 [Shewanella halifaxensis HAW-EB4]
ATTAGATTAGCTAAT
>Shal_3375(gcvT) Score=5.4 Pos=-213 [Shewanella halifaxensis HAW-EB4]
ATGAGAAAAACTAAT
>Shal_4215(kbl) Score=5.2 Pos=-147 [Shewanella halifaxensis HAW-EB4]
ATTAGTTTAGCTAAT
# TF - FadR: Shal_1842
>Shal_2681(fadL) Score=4.5 Pos=-39 [Shewanella halifaxensis HAW-EB4]
TTCTGGTCGGAGTTGTT
>Shal_2671(fadI) Score=5.2 Pos=-97 [Shewanella halifaxensis HAW-EB4]
TAATGGTCAGACCTGTT
>Shal_0152(SO4716) Score=4.9 Pos=-107 [Shewanella halifaxensis HAW-EB4]
AACTGGACTGACCTGTT
>Shal_1842(fadR) Score=3.5 Pos=-52 [Shewanella halifaxensis HAW-EB4]
CTCTGGTATGATCTGTA
>Shal_1890(fadE) Score=4.1 Pos=-92 [Shewanella halifaxensis HAW-EB4]
CACAGGTCTGACCACAC
>Shal_3794(SO0572) Score=4 Pos=-35 [Shewanella halifaxensis HAW-EB4]
GTCTGGACAGACCACTT
# TF - FabR: Shal_4155
>Shal_4156(OLE1) Score=6.3 Pos=-40 [Shewanella halifaxensis HAW-EB4]
AGCGTACAGATGTACGCT
>Shal_1898(hylII) Score=6.1 Pos=-87 [Shewanella halifaxensis HAW-EB4]
AGCGTACACGTGTGCGCT
>Shal_0063(lcfE) Score=4.6 Pos=-34 [Shewanella halifaxensis HAW-EB4]
GCGGAACACTTGTAAGCT
>Shal_3007(pfaR) Score=5.2 Pos=-205 [Shewanella halifaxensis HAW-EB4]
AGCTTACAAGTGTTCACC
>Shal_2681(fadL) Score=6.2 Pos=-241 [Shewanella halifaxensis HAW-EB4]
AGCGTACATTTGTACGCT
>Shal_3798(plsC) Score=4.8 Pos=-104 [Shewanella halifaxensis HAW-EB4]
AGGCTACACGTGTAAACT
>Shal_1266(fadE3) Score=5.8 Pos=-166 [Shewanella halifaxensis HAW-EB4]
AGCGTACAGCCGTAAGCT
>Shal_4155(fabR) Score=6.3 Pos=-55 [Shewanella halifaxensis HAW-EB4]
AGCGTACATCTGTACGCT
>Shal_2348(fabA) Score=6.4 Pos=-55 [Shewanella halifaxensis HAW-EB4]
AGCGTACACGTGTTCGCT
# TF - DeoR: Shal_3871
>Shal_3869(deoD) Score=5.5 Pos=-72 [Shewanella halifaxensis HAW-EB4]
TGCGGACTAATGTCCTCT
# TF - CueR: Shal_2868
>Shal_2867(copA) Score=6 Pos=-62 [Shewanella halifaxensis HAW-EB4]
ACTCTCCCCTTATGGGAGACA
>Shal_2868(cueR) Score=6 Pos=-81 [Shewanella halifaxensis HAW-EB4]
TGTCTCCCATAAGGGGAGAGT
# TF - CalR: Shal_3430
>Shal_3429(calB) Score=7 Pos=-49 [Shewanella halifaxensis HAW-EB4]
GACCGACTAATCAGTCGGTC
# TF - BirA: Shal_4150
>Shal_2478(bioA) Score=7.3 Pos=-44 [Shewanella halifaxensis HAW-EB4]
CTGTCAATG---------------GGTTTACTA
>Shal_2477(bioB) Score=7.3 Pos=-236 [Shewanella halifaxensis HAW-EB4]
TAGTAAACC---------------CATTGACAG
# TF - BetI: Shal_1059
>Shal_1059(betI) Score=7.3 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TTAATTGAACGTTCAATCAA
# TF - AzrR: Shal_0940
>Shal_0940(azrR) Score=5.4 Pos=-92 [Shewanella halifaxensis HAW-EB4]
CCTTACAAAACAAAGTAAAG
>Shal_0939(azr) Score=5.4 Pos=-65 [Shewanella halifaxensis HAW-EB4]
CTTTACTTTGTTTTGTAAGG
# TF - ArgR: Shal_0902
>Shal_3114(argW) Score=4.9 Pos=-91 [Shewanella halifaxensis HAW-EB4]
GTTGAATGGATATTCAAT
>Shal_1061(gltB) Score=3.8 Pos=-331 [Shewanella halifaxensis HAW-EB4]
AGTGACTACCATTTCACT
>Shal_1061(gltB) Score=4.6 Pos=-355 [Shewanella halifaxensis HAW-EB4]
TATGCATAAATAAGCAAA
>Shal_0887(SO0762) Score=4.4 Pos=-155 [Shewanella halifaxensis HAW-EB4]
AACGCATAAAAATGCACC
>Shal_4094(argE) Score=4.5 Pos=-26 [Shewanella halifaxensis HAW-EB4]
TTTGAATATATATTTAGG
>Shal_0969(aprE2) Score=4.4 Pos=-301 [Shewanella halifaxensis HAW-EB4]
TCAGCATTTAAATTCAAG
>Shal_3484(artI) Score=4.7 Pos=-98 [Shewanella halifaxensis HAW-EB4]
CTTGAATTTTTAATCAAA
>Shal_4094(argE) Score=3.8 Pos=-122 [Shewanella halifaxensis HAW-EB4]
ATTGAACATATATACTCT
>Shal_1604(astB) Score=4.6 Pos=-137 [Shewanella halifaxensis HAW-EB4]
TGTGCATTTTGATGCAAA
>Shal_1604(astB) Score=4.1 Pos=-169 [Shewanella halifaxensis HAW-EB4]
ATTTCATTAATAGTCATC
>Shal_3484(artI) Score=5.3 Pos=-228 [Shewanella halifaxensis HAW-EB4]
AATGAATTATTATTCAAC
>Shal_3610(astC) Score=4 Pos=-242 [Shewanella halifaxensis HAW-EB4]
TATGACTATTTATGCTTA
>Shal_3944(ilvG) Score=4.2 Pos=-193 [Shewanella halifaxensis HAW-EB4]
CGTGATTATTAAATCACA
>Shal_0816(Swoo_0949) Score=3.7 Pos=-91 [Shewanella halifaxensis HAW-EB4]
ATTGATTTAATATTAGCT
>Shal_0816(Swoo_0949) Score=4.3 Pos=-102 [Shewanella halifaxensis HAW-EB4]
TTTGCTTAAAAATTGATT
>Shal_4092(argB) Score=4.9 Pos=-53 [Shewanella halifaxensis HAW-EB4]
AGTGCATAAAGATTCATT
>Shal_0432(argA) Score=5.6 Pos=-100 [Shewanella halifaxensis HAW-EB4]
AATGAATTTAAATGCACT
>Shal_0969(aprE2) Score=4.6 Pos=-198 [Shewanella halifaxensis HAW-EB4]
TTTGAACTATTATTCAAC
>Shal_1061(gltB) Score=4 Pos=-310 [Shewanella halifaxensis HAW-EB4]
TCTGCAAGAAAAATCACT
>Shal_1686(SO2753) Score=3.9 Pos=-230 [Shewanella halifaxensis HAW-EB4]
CATGATATTTAATTCATC
>Shal_0902(argR) Score=5.5 Pos=-95 [Shewanella halifaxensis HAW-EB4]
AATGAATTTTTATTCACA
>Shal_2217(SO2306) Score=4.9 Pos=-103 [Shewanella halifaxensis HAW-EB4]
TATGCATAACTATTCAGT
>Shal_4093(argC) Score=4.5 Pos=-267 [Shewanella halifaxensis HAW-EB4]
CCTAAATATATATTCAAA
>Shal_1235(oadG) Score=4.8 Pos=-63 [Shewanella halifaxensis HAW-EB4]
GGTGAATATTTATTGAGT
>Shal_1235(oadG) Score=4.1 Pos=-43 [Shewanella halifaxensis HAW-EB4]
CATCCATGTTTATTCACA
# TF - NikR: Shal_3729
>Shal_3728(nikA) Score=6.8 Pos=-49 [Shewanella halifaxensis HAW-EB4]
GTGTGACGATTCGAAAAATAGTATTAC
>Shal_3729(nikR) Score=6.8 Pos=-164 [Shewanella halifaxensis HAW-EB4]
GTAATACTATTTTTCGAATCGTCACAC
>Shal_1183(omp_Ni) Score=7.1 Pos=-138 [Shewanella halifaxensis HAW-EB4]
GTAATACTTTTTTAAAATTCGTCATAC
# TF - MetR: Shal_3283
>Shal_2387(ilvI) Score=4.3 Pos=-244 [Shewanella halifaxensis HAW-EB4]
ATGAATGTTCTTCAT
>Shal_3283(metR) Score=4.3 Pos=-162 [Shewanella halifaxensis HAW-EB4]
ATGAGCAAAATTCAG
>Shal_3283(metR) Score=4.3 Pos=-48 [Shewanella halifaxensis HAW-EB4]
TCGAAACGAATTCAA
>Shal_1203(glyA) Score=4 Pos=-119 [Shewanella halifaxensis HAW-EB4]
ACGAAACTCTCTCAT
# TF - LexA: Shal_0260
>Shal_1212(recN) Score=5.8 Pos=-62 [Shewanella halifaxensis HAW-EB4]
TACTGTATAGATAAACAGTA
>Shal_1212(recN) Score=5.5 Pos=-40 [Shewanella halifaxensis HAW-EB4]
TACTGTTTAACTATACAGTG
>Shal_2636(topB) Score=5.9 Pos=-36 [Shewanella halifaxensis HAW-EB4]
TACTGTTAATTTATACAGTA
>Shal_1232(recA) Score=5.6 Pos=-124 [Shewanella halifaxensis HAW-EB4]
TACTGTATGATTGTACAGTA
>Shal_3176(dinB) Score=6.1 Pos=-44 [Shewanella halifaxensis HAW-EB4]
TACTGTTTTTATATACAGTA
>Shal_2367(yebG) Score=6 Pos=-31 [Shewanella halifaxensis HAW-EB4]
TACTGTATATAAAAACAGTG
>Shal_0260(lexA) Score=4.9 Pos=-45 [Shewanella halifaxensis HAW-EB4]
TACTGTATATACTGACAGGT
>Shal_0260(lexA) Score=4.9 Pos=-26 [Shewanella halifaxensis HAW-EB4]
TACTGTATAGAAAGACAGGG
>Shal_2730(dinG) Score=5.4 Pos=-43 [Shewanella halifaxensis HAW-EB4]
CACTGTTATTATGTACAGCA
>Shal_2184(umuD) Score=5.9 Pos=-34 [Shewanella halifaxensis HAW-EB4]
TACTGTATAAAAATACAGTG
>Shal_2170(umuD) Score=5.7 Pos=-35 [Shewanella halifaxensis HAW-EB4]
TACTGTACAAATATACAGTT
>Shal_0385(recG) Score=4.8 Pos=-21 [Shewanella halifaxensis HAW-EB4]
ATATGTATAAATTTACAGTG
>Shal_1316(ogr) Score=5.3 Pos=-63 [Shewanella halifaxensis HAW-EB4]
TACTGTTCAAAAACACAGTA
>Shal_1634(xerC) Score=5.7 Pos=-35 [Shewanella halifaxensis HAW-EB4]
TACTGTATAGATAAACAGTG
# RNA - FMN
>Shal_4187(ribB) Score=46.3 Pos=-432 [Shewanella halifaxensis HAW-EB4]
ATAATTCTCAGGGCGGGGTGTAACTCCCCACCGGCGGTAAGTTATGGTGTGAATGTTGATCCCACTGTAAAAGCCCGCGAGCGCCTAGTTTACGCTATTAAATATCAATATTAATAGCTGCGAATATTAAC
# RNA - TPP
>Shal_1900(thiC) Score=71.6 Pos=-243 [Shewanella halifaxensis HAW-EB4]
TCATCTTGTCGGAGTGCCATATGGCTGAGACCGTTAATTCGGGATCCGTTGAACCTGATCAGGCTAGAACCTGCGAAGGAAACAAGCGAAATAACTGCAG
>Shal_2461(omp_thi) Score=66.4 Pos=-184 [Shewanella halifaxensis HAW-EB4]
CGCGCTCGCCAAGGGGTGTTAAAGTCTATAAACCGAAAGTTGGATTTATTGGCGTTGACTGAGATGTTGCAAAACGAACCCTTTGAACCTGATCCGGCTAATACCGGCGTAGGAATGGGCCAAAAGTCATTT
# RNA - Cobalamin
>Shal_3286(btuB) Score=76.8 Pos=-336 [Shewanella halifaxensis HAW-EB4]
TATTTTAGTCAACTTTACTGGTGCCTTAGGTTACAGCTGTAATCGAGGATAATCGGGAAGTCAGTTAAATTCTGACACTGCCCCCGCAACGGTGAATGGTGAGAGACGAGTGCACCTCAATGGAAAGGTGTTATAAAGCTTGTACTCGTGTGTTAATCGCTGATTGATACAGAACCTAAGTCCGGAGACCGGCCAGCATAGTGATTTCGATG
>Shal_3460(btuD) Score=43 Pos=-283 [Shewanella halifaxensis HAW-EB4]
TAAATAAGAATGAAAGTTAGGTGCTTAACGGCATAAAGGGAACCGGAAGCTGACTGCAAGCAGTGGCTTAGTCCGGACTGTACCCGCAACTGTAGGGAAGCTTAGCCGTAGCGCTGCTTCTAAGTCAGATACCTGCCTAACTGATGTTGTTCAGT
# RNA - Lysine
>Shal_3334(lysW) Score=126.2 Pos=-256 [Shewanella halifaxensis HAW-EB4]
TCCTTTGAGTAGAGGCGCGCTGCCTAAAAGTATCCAGATAGAGGGTGACACCTAAGACATCTGGGGAAAGGAGACAGCGCCGAAGTTATTGTTGCGTCATCAACAATCGCTGGGTCTGCATTTAACAGATGCAGGACTGCCATAGTTATGTTGTCTATGGAGCGCTATTAGAGGG
>Shal_2943(lysW) Score=106.1 Pos=-302 [Shewanella halifaxensis HAW-EB4]
CCTGAGAAGTAGAGGTGCATTAAATATGAGTATCGATAAGTAGGGTGATGCCGCTGAGCTATCGAGAAAGGATTTAATGCCGAAGTGACATAGCATATCGGGGCTAGTTGCTGGGGCTGTGACCAAATAGGGACAGCACTGCCATAGTATTTCTTATCTGGAAGATAAGAATTTTTATATTAATGACGAACCATTAATATGGCTATGGAGCGCTACTGATAGG
>Shal_0788(lysC) Score=80.2 Pos=-326 [Shewanella halifaxensis HAW-EB4]
ACTACAGAAGAGGAGCGCTAACTAGGTAGTAAGTTGGAGGGGGCCAAACCCCAATGATGGCTTATGAGGGAGATTAGCGCCGAGATATTCATAGCCATTTGGTCGGGCTTGAATGTTGGTTGTTCAGGCTGAATCCTGTCGATTGTCACCAATGTTTTTTATGGTGGAGAGCTTCTGGTTGCGA
# RNA - Glycine
>Shal_0768(glyP) Score=35.7 Pos=-451 [Shewanella halifaxensis HAW-EB4]
TGAAGGTAGCAGGAGAGTGGGGAGTAACCCCACACCGACGAGGCAACTTTGTTATTGCTAACGCGTTAACAAAGCACTCTTTCAGGTGCCACATGGTGGTGAGGACTGTTACTGG
>Shal_0768(glyP) Score=60.5 Pos=-337 [Shewanella halifaxensis HAW-EB4]
GACGAGCCTCTGGAGAGACTGTGAGCAGATAAGTGTTCGTAAGCTTAATTGTCACACAGCGCCGAAGGCGAAAGTGCAAACTCTATCATTGAGTTTACGCGAAACGCTCAGGCAAAAGGACAGAGGAGAGGATGA
# RNA - Purine
>Shal_3750(pbuG) Score=53.8 Pos=-240 [Shewanella halifaxensis HAW-EB4]
GCGCCAACAATTTATTGTGCTGTATATCGCTGGAAATCTGGTCCAGAAGTCTCTACCACAAGACCTAATCTTGTGACTACAGCCCAATCACCGTCCGCTGC
>Shal_3477(add) Score=72.8 Pos=-189 [Shewanella halifaxensis HAW-EB4]
AAAATTAGCGGTTAACGCTTCGTATAATCTCAATGATATGGTTTGAGAGTTTCTACCAAGAGCCCTAAACTCTTGATTATGAAGACTTTACTTTATGAATA
# RNA - MOCO_RNA_motif
>Shal_0122(moaA) Score=96.6 Pos=-123 [Shewanella halifaxensis HAW-EB4]
GGTTGACGGTTCTCCGAGCTTCTTACCCTACGTCGAGACAGATACGGGTTTTTAGCCGTGGCAATAACGCCACCGGGGTGAGAAAAGAAATGATCTCACCTCCCCTTACTTGGAAAGGTGATCATGTCCCAACTACAA
# RNA - GEMM_RNA_motif
>Shal_3479(PF10462) Score=76.9 Pos=-190 [Shewanella halifaxensis HAW-EB4]
CAGCGAAAAGGCAAACCAGTTGAAAGACTGGGACGCAAAACCACCGGTCTAAGGGTCAATTGTACCTATGATAGCGGGGATGCCATTGG
>Shal_3745(chiA2) Score=70.7 Pos=-157 [Shewanella halifaxensis HAW-EB4]
TTGATGAAAAAGGCAAAACCTGTGAAAGCGGGTGACGCAAAGCATCCAGCCTAACGGAGCAACTCCTACGGCAGTGGCGCTACCGCA
# RNA - yybP-ykoY
>Shal_0730(COG2119) Score=43.8 Pos=-228 [Shewanella halifaxensis HAW-EB4]
CGCCTCCGCTTCAGGGGAGTAGCTATCGGTAGAGTGACTCAAGGATTACTTAAGTCTTCTACTGAGTATGTATCAACATAATTGGCCTAATGCCATGGTGCATACAGCAGCTTGATGTGCAGCAGCACATCGAGTTTGCCCAGCAAGACCTGAGCACCGCAC
>Shal_1633(ykoY) Score=46.5 Pos=-192 [Shewanella halifaxensis HAW-EB4]
ATGTCTGCGTTTTGGGGAGTAGTCACTCTGTCGCGCCGTCGTCATTCCGTTGCTTTTGCTTCCGGCCCGCGAGAACACATTAAATAATCTGTTTTGACAAGACCAACAACACGTAT
# RNA - His_leader
>Shal_1824(hisG) Score=58 Pos=-177 [Shewanella halifaxensis HAW-EB4]
TGCATCATCATCACCATATGCGGTAGCCTTCGGAAGCTCACTGCCGGAGGACTATTTCCTTCCGGCGGTTGATTTAAAAATATCAAAAACCCTTGGAAGGAATTCCAAGGGTTTTTTGGT
# RNA - Leu_leader
>Shal_0438(leuA) Score=19.3 Pos=-212 [Shewanella halifaxensis HAW-EB4]
GTGATGAAATATAACCGTGTATTACTAGGACTCCTTATTCTCATTCTCGCAGACTCTGCGCGGAGGACTTAGTGCTATACGCTTGAAAATAAGCCTGCATTAATAAACCCCGCTAATAACGCGGGGTTTTTTGT
# RNA - S15
>Shal_3144(rpsO) Score=100.7 Pos=-60 [Shewanella halifaxensis HAW-EB4]
CCCCTTTGGCTGAGTTAGTGATCGGCTAAAGATTTTTAATGTAATATTTTGGAGATAGAAATGTCACTAAGTGTTGAAGCTAAAGCTCAAATCCTAGCTGAATTTGGTCGTTGTGAA
# RNA - Thr_leader
>Shal_1114(thrA) Score=54.4 Pos=-153 [Shewanella halifaxensis HAW-EB4]
CGTTTTAATGAACACCACCATTATTACAACCACCACGATTACCAACGTGGGGGCGGGCTAAGCACAACCTGATATAAGTAAAATATCAAGCCCGCTCCCCCAAAAGGAGCGGGCTTTTTTGTTTC
# RNA - Trp_leader
>Shal_1658(trpE) Score=40.5 Pos=-221 [Shewanella halifaxensis HAW-EB4]
CATCAATTGGTGGTGGCACTTCCCAAATTAGCGGGTGGTGTGGAACTGTGTGCTCAGAAAACTGAGTCAAGATTCAACAAGAAAGCCCGCATACACTGCGGGCTTTCTTGT
# TF - Fur: Shal_2482
>Shal_3179(bfr2) Score=4.3 Pos=-121 [Shewanella halifaxensis HAW-EB4]
TAGTGATAATGAAAATCACTA
>Shal_2783(mtrH) Score=5.3 Pos=-65 [Shewanella halifaxensis HAW-EB4]
AGGTGAGAATAATTCTCATAA
>Shal_3111(adhC) Score=4.8 Pos=-78 [Shewanella halifaxensis HAW-EB4]
AAATGGAATTAGTTATAATCT
>Shal_3649(bfd) Score=5.5 Pos=-58 [Shewanella halifaxensis HAW-EB4]
CACTGAGAATCATTTTCATTT
>Shal_3411 Score=5.9 Pos=-54 [Shewanella halifaxensis HAW-EB4]
ATTTGATAATGATTATCATTT
>Shal_4274 Score=6.3 Pos=-47 [Shewanella halifaxensis HAW-EB4]
AAATGATAACCATTATCATTT
>Shal_2778(mtrD) Score=5.7 Pos=-336 [Shewanella halifaxensis HAW-EB4]
AAACGATAATAATTTTCAATT
>Shal_3399(hmuA) Score=6.5 Pos=-144 [Shewanella halifaxensis HAW-EB4]
AAATGATAATGATTTTCATTT
>Shal_0897(fbpA) Score=5.4 Pos=-64 [Shewanella halifaxensis HAW-EB4]
AATTGAGAATTATTATCAGTC
>Shal_2195(Sfri_2008) Score=5.9 Pos=-62 [Shewanella halifaxensis HAW-EB4]
TGTTGATAATCATTCTCATTT
>Shal_1179 Score=6.1 Pos=-44 [Shewanella halifaxensis HAW-EB4]
AATTGATAATGATTATCAATT
>Shal_2777(feoA) Score=5.7 Pos=-126 [Shewanella halifaxensis HAW-EB4]
AATTGAAAATTATTATCGTTT
>Shal_3400(tonB) Score=6.5 Pos=-207 [Shewanella halifaxensis HAW-EB4]
AAATGAAAATCATTATCATTT
>Shal_3528(Sfri_0810) Score=5.7 Pos=-100 [Shewanella halifaxensis HAW-EB4]
TAATGTAAATCATTCTCATTT
>Shal_0192 Score=4.4 Pos=-87 [Shewanella halifaxensis HAW-EB4]
AAATACGTCCCATTATCATTT
>Shal_2220 Score=5.6 Pos=-34 [Shewanella halifaxensis HAW-EB4]
AAATGAAAATGATTCGCATTG
>Shal_4287 Score=6 Pos=-68 [Shewanella halifaxensis HAW-EB4]
AAATAAAAATAGTTCTCATTT
>Shal_2698 Score=5.8 Pos=-103 [Shewanella halifaxensis HAW-EB4]
TAACGATAATGATTTTCATTT
>Shal_3021 Score=5.6 Pos=-51 [Shewanella halifaxensis HAW-EB4]
TAATAAGAATCGTTATCATCT
>Shal_1861 Score=5.2 Pos=-35 [Shewanella halifaxensis HAW-EB4]
TAATATAAACAATTATCATTT
>Shal_1257 Score=5.1 Pos=-96 [Shewanella halifaxensis HAW-EB4]
GAATGGAAACGGTTCTCAATT
>Shal_0766(Sama_0590) Score=5.6 Pos=-67 [Shewanella halifaxensis HAW-EB4]
AAATGAGAATGAATAGCATTA
>Shal_3020 Score=5.8 Pos=-42 [Shewanella halifaxensis HAW-EB4]
AAAGGAGAATAATTCTCATTT
>Shal_3179(bfr2) Score=4.3 Pos=-88 [Shewanella halifaxensis HAW-EB4]
TGTTGATATTTAACCTTATTT
>Shal_4189(ftn) Score=6 Pos=-111 [Shewanella halifaxensis HAW-EB4]
AAATGAAAACCATTATTATTT
# TF - Crp: Shal_3603
>Shal_0567(mccA) Score=3.8 Pos=-284 [Shewanella halifaxensis HAW-EB4]
TTTTGCGATTCAAAAAACGTTA
>Shal_2777(feoA) Score=4.7 Pos=-158 [Shewanella halifaxensis HAW-EB4]
AGTTGAGATATTTATCACATAA
>Shal_0616(SO4142) Score=3.8 Pos=-289 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCTAGATCTGTTAC
>Shal_3818(SO0543) Score=4.7 Pos=-235 [Shewanella halifaxensis HAW-EB4]
TTTTGTTACATGGATCGCATAT
>Shal_0532(Sputcn32_0539) Score=4 Pos=-137 [Shewanella halifaxensis HAW-EB4]
AAGCATGATCCCCTTCACGCTA
>Shal_3525(hemG) Score=4 Pos=-139 [Shewanella halifaxensis HAW-EB4]
TTTTGTGAGGTAGGTAAAGCTA
>Shal_3525(hemG) Score=3.8 Pos=-97 [Shewanella halifaxensis HAW-EB4]
CCTCGTGATCTGTTTCATGTAA
>Shal_2707(SO3719) Score=5.3 Pos=-235 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATATCGCTCACAAAA
>Shal_0482(acnB) Score=3.7 Pos=-247 [Shewanella halifaxensis HAW-EB4]
TTATATAATTTAGATCAAGGTT
>Shal_0482(acnB) Score=5 Pos=-139 [Shewanella halifaxensis HAW-EB4]
AAATGTGATCGGATTCATACTT
>Shal_1258(yfiA-1) Score=3.9 Pos=-319 [Shewanella halifaxensis HAW-EB4]
AAGAGTGATAAAAATCAAGCTA
>Shal_1258(yfiA-1) Score=3.8 Pos=-230 [Shewanella halifaxensis HAW-EB4]
TATCCTGATGAATGCCACAATT
>Shal_1548(SO3120) Score=4 Pos=-207 [Shewanella halifaxensis HAW-EB4]
AAACGCGATATAAATCACTTTC
>Shal_4095(ppc) Score=5 Pos=-106 [Shewanella halifaxensis HAW-EB4]
AAAAGTGATATAGAGCACATTA
>Shal_0297(menD) Score=5 Pos=-177 [Shewanella halifaxensis HAW-EB4]
TTTTGTTATACCAATCACATAT
>Shal_0017(pepQ) Score=4 Pos=-250 [Shewanella halifaxensis HAW-EB4]
CAGTGTGCGACTAATCACAAAA
>Shal_0072(hutC) Score=3.9 Pos=-106 [Shewanella halifaxensis HAW-EB4]
ATTTGTGAGCCCGCTTGTATTT
>Shal_1783(cdd) Score=3.9 Pos=-81 [Shewanella halifaxensis HAW-EB4]
AACTGAGATCTTCATCTCATTC
>Shal_2878(atoB) Score=4.2 Pos=-138 [Shewanella halifaxensis HAW-EB4]
AATGTTGAGCAAGATCACACTT
>Shal_2335(ydhD) Score=3.9 Pos=-154 [Shewanella halifaxensis HAW-EB4]
AGTTGTGAAGTGTATCATTGTT
>Shal_0903(mdh) Score=3.9 Pos=-46 [Shewanella halifaxensis HAW-EB4]
AAGATGGATCTGAATCACAAAA
>Shal_2064(SO1419) Score=4.1 Pos=-93 [Shewanella halifaxensis HAW-EB4]
TTGTGTTAACTGCGTCAAATAA
>Shal_0551(mccA) Score=4.3 Pos=-340 [Shewanella halifaxensis HAW-EB4]
TTTTGTGACCTCTCTAGCCTTT
>Shal_0886(nrfA) Score=4.2 Pos=-152 [Shewanella halifaxensis HAW-EB4]
AAGTGTGAGCAACAACACATTC
>Shal_0219(fixA) Score=4.8 Pos=-274 [Shewanella halifaxensis HAW-EB4]
AAGTGTGACACACATAACATTA
>Shal_1109(SO3421) Score=4.9 Pos=-255 [Shewanella halifaxensis HAW-EB4]
AGTCGTGATCTAAATCACGTTT
>Shal_1117 Score=3.8 Pos=-77 [Shewanella halifaxensis HAW-EB4]
CGGTGCGATCTGTATCACTATT
>Shal_2680(putP) Score=3.7 Pos=-74 [Shewanella halifaxensis HAW-EB4]
ATTTGAGCCTTGGCTCATAAAT
>Shal_3966(SO1414) Score=4 Pos=-269 [Shewanella halifaxensis HAW-EB4]
AATCGGGATTCACTTCACGCTA
>Shal_3083(lldP) Score=4.5 Pos=-300 [Shewanella halifaxensis HAW-EB4]
TTACGTGACACGGATCACAGAG
>Shal_3083(lldP) Score=4.5 Pos=-265 [Shewanella halifaxensis HAW-EB4]
AACTGTGATCAGTCTCACTAAT
>Shal_1245(purE) Score=4.4 Pos=-269 [Shewanella halifaxensis HAW-EB4]
TTGTGGGATCTAGGTAACATTT
>Shal_1780 Score=4.7 Pos=-174 [Shewanella halifaxensis HAW-EB4]
ATATTTGAGTTGATTCACAAAA
>Shal_0300 Score=3.6 Pos=-100 [Shewanella halifaxensis HAW-EB4]
ATAATTGATTTGTATCAATGTT
>Shal_4178(pckA) Score=4.8 Pos=-112 [Shewanella halifaxensis HAW-EB4]
TTTTTTGATCTTGCCCACATAT
>Shal_3966(SO1414) Score=4.2 Pos=-228 [Shewanella halifaxensis HAW-EB4]
CTTTGTGAGTTACGTCATACAA
>Shal_0228(swp_4930) Score=4.3 Pos=-81 [Shewanella halifaxensis HAW-EB4]
TATTGTGCTCACAGTTACATTT
>Shal_0478(lpdA) Score=4.6 Pos=-130 [Shewanella halifaxensis HAW-EB4]
GATTGTGATCCGTATCAAACAA
>Shal_0534(SO4134) Score=4.6 Pos=-97 [Shewanella halifaxensis HAW-EB4]
CAATTTGATCGATATCACGTTT
>Shal_3630(petA) Score=4.6 Pos=-128 [Shewanella halifaxensis HAW-EB4]
AACTATGATCTGGCTCAAATTT
>Shal_2408(hmgR) Score=4.5 Pos=-114 [Shewanella halifaxensis HAW-EB4]
TAATGTGATCTAGCTTTAATTT
>Shal_0016(fadB) Score=4.4 Pos=-134 [Shewanella halifaxensis HAW-EB4]
TTTTGTGATTAGTCGCACACTG
>Shal_0716(napD) Score=4.2 Pos=-174 [Shewanella halifaxensis HAW-EB4]
ATCTGTGAATCAGATCACCATG
>Shal_3794(SO0572) Score=3.9 Pos=-110 [Shewanella halifaxensis HAW-EB4]
TAAAATGATGAGTGTCATAATT
>Shal_1923 Score=4.1 Pos=-199 [Shewanella halifaxensis HAW-EB4]
ACTTGTGCTGTTTGTCACAATG
>Shal_1923 Score=5.5 Pos=-306 [Shewanella halifaxensis HAW-EB4]
AATTGTGATGCGCGTCACAATT
>Shal_4103(scyA) Score=4.4 Pos=-230 [Shewanella halifaxensis HAW-EB4]
CAATTTGATGTAGTTCGAATAT
>Shal_2994 Score=4.6 Pos=-181 [Shewanella halifaxensis HAW-EB4]
TTCCTTGATCTAGATCACACTA
>Shal_2777(feoA) Score=4.7 Pos=-279 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCTGTGTCAAGTTT
>Shal_2493(sdhC) Score=4.9 Pos=-86 [Shewanella halifaxensis HAW-EB4]
ATCTGTGATCTGGATCACCGAT
>Shal_0486(SO0439) Score=4.7 Pos=-138 [Shewanella halifaxensis HAW-EB4]
TTTTGTGACATAGGTAACACAA
>Shal_2672(SO3090) Score=4.6 Pos=-319 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCTGATTCTAACTT
>Shal_1245(purE) Score=4.4 Pos=-269 [Shewanella halifaxensis HAW-EB4]
TTGTGGGATCTAGGTAACATTT
>Shal_3720(modE) Score=4.3 Pos=-102 [Shewanella halifaxensis HAW-EB4]
AAATGCGACCTAATTCAAGTAA
>Shal_2000(swp_4302) Score=4.5 Pos=-182 [Shewanella halifaxensis HAW-EB4]
AATCGTGATAAACCACACAAAA
>Shal_4104(ccmA) Score=3.9 Pos=-212 [Shewanella halifaxensis HAW-EB4]
TTTTGTGACATAAACCGTACTA
>Shal_0442(SO4232) Score=3.8 Pos=-114 [Shewanella halifaxensis HAW-EB4]
TTTTGTGCTGTTTTTTATAAAG
>Shal_3917(hemC) Score=5.1 Pos=-133 [Shewanella halifaxensis HAW-EB4]
AAATGTGATCAACATCACGCTT
>Shal_3898(fdrC) Score=4.1 Pos=-94 [Shewanella halifaxensis HAW-EB4]
TTTGTTGATCTATCTCACGGTT
>Shal_3900(prmA) Score=3.7 Pos=-249 [Shewanella halifaxensis HAW-EB4]
CTATTAGACGTAGATCACAAAC
>Shal_3900(prmA) Score=3.9 Pos=-281 [Shewanella halifaxensis HAW-EB4]
TTTCGTGATCAGTGTCACTACA
>Shal_4104(ccmA) Score=3.8 Pos=-112 [Shewanella halifaxensis HAW-EB4]
ATATTCGAACTACATCAAATTG
>Shal_0814 Score=4.3 Pos=-36 [Shewanella halifaxensis HAW-EB4]
AAATGGGATGTAAATAACGTAA
>Shal_2887(ompW) Score=5.1 Pos=-161 [Shewanella halifaxensis HAW-EB4]
AAATGTGATCTTCATCGCCTTT
>Shal_2472 Score=4.5 Pos=-156 [Shewanella halifaxensis HAW-EB4]
TAATTTGACTGAGCGCACATTT
>Shal_0924(purT) Score=4.5 Pos=-169 [Shewanella halifaxensis HAW-EB4]
AGTAGTGATCTCGTGCACACAT
>Shal_1531(phhA) Score=4.7 Pos=-86 [Shewanella halifaxensis HAW-EB4]
AACCGTGATCTAGTTAACAAAA
>Shal_0481(yniC) Score=3.7 Pos=-178 [Shewanella halifaxensis HAW-EB4]
AACCTTGATCTAAATTATATAA
>Shal_2329(SO2871) Score=5.1 Pos=-64 [Shewanella halifaxensis HAW-EB4]
ATTTGTGACTCTGGTCACAAAT
>Shal_3336(Shew_1222) Score=4.5 Pos=-216 [Shewanella halifaxensis HAW-EB4]
TTAAGTGATTTGTATCGCCATA
>Shal_3336(Shew_1222) Score=4.8 Pos=-119 [Shewanella halifaxensis HAW-EB4]
AATAGTGAGGTGGGTCACAAAT
>Shal_1059(Sbal_1323) Score=4.3 Pos=-163 [Shewanella halifaxensis HAW-EB4]
ATCTGTGAACCTTGTCGCATTT
>Shal_0885(narQ) Score=4.3 Pos=-111 [Shewanella halifaxensis HAW-EB4]
GAATGTGTTGTTGCTCACACTT
>Shal_1549 Score=4.1 Pos=-148 [Shewanella halifaxensis HAW-EB4]
GAAAGTGATTTATATCGCGTTT
>Shal_0122(moaA) Score=4.3 Pos=-222 [Shewanella halifaxensis HAW-EB4]
TGGCGTGATAACTGTCACAAAA
>Shal_0823(SO0919) Score=4.3 Pos=-160 [Shewanella halifaxensis HAW-EB4]
TTAAGCGATCTAGCTCTCAATT
>Shal_2355(ycbW) Score=4.1 Pos=-62 [Shewanella halifaxensis HAW-EB4]
TATTTTGATATTGATGAAATAA
>Shal_3187(nqrA-2) Score=3.7 Pos=-127 [Shewanella halifaxensis HAW-EB4]
CAGCGTGATTACAGTCGCACTT
>Shal_0063(SO0075) Score=4.5 Pos=-109 [Shewanella halifaxensis HAW-EB4]
TTTTGTGTTTGAGTTAACAAAA
>Shal_0676(omp35) Score=4.4 Pos=-150 [Shewanella halifaxensis HAW-EB4]
AAACATGATCTAGTCCACAATT
>Shal_3859(SO4118) Score=3.8 Pos=-196 [Shewanella halifaxensis HAW-EB4]
TATAGCGATAAAGTTAAAAAAT
>Shal_2261(hyaA) Score=5 Pos=-212 [Shewanella halifaxensis HAW-EB4]
TTACGTGATCTCCATCACCTTT
>Shal_1764(SO2589) Score=4.4 Pos=-84 [Shewanella halifaxensis HAW-EB4]
CAGCGTGATCTACGTCACATTG
>Shal_2004(swp_4060) Score=4.3 Pos=-157 [Shewanella halifaxensis HAW-EB4]
TAATGTGATTTTCAGAATAATT
>Shal_3535(swp_4060) Score=3.9 Pos=-147 [Shewanella halifaxensis HAW-EB4]
AAATATGAGCTTGTTCCAAATT
>Shal_3240(lipB) Score=5.2 Pos=-76 [Shewanella halifaxensis HAW-EB4]
AAATGTGATCCGTATTACATTT
>Shal_2409(hmgA) Score=3.9 Pos=-63 [Shewanella halifaxensis HAW-EB4]
AAATTAAAGCTAGATCACATTA
>Shal_0192 Score=4.2 Pos=-105 [Shewanella halifaxensis HAW-EB4]
TATTGTAAACCACGTCGCAAAT
>Shal_1103(hcp) Score=4.3 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TAAGGTGATCTCTTTCATGTTT
>Shal_3610(astC) Score=3.7 Pos=-138 [Shewanella halifaxensis HAW-EB4]
AACTGGCATTCTGATCACATTT
>Shal_0193(prlC) Score=4.4 Pos=-192 [Shewanella halifaxensis HAW-EB4]
ATTTGCGACGTGGTTTACAATA
>Shal_0193(prlC) Score=4.2 Pos=-142 [Shewanella halifaxensis HAW-EB4]
AAATTTGATCTAGATCCTAGAT
>Shal_1381(cydA) Score=4.1 Pos=-234 [Shewanella halifaxensis HAW-EB4]
ATTTGGGATGAGTATCACGGAA
>Shal_1659(Sfri_2271) Score=4.3 Pos=-100 [Shewanella halifaxensis HAW-EB4]
ATGCTTGATCTAGCTCAAACTT
>Shal_1686(SO2753) Score=3.6 Pos=-266 [Shewanella halifaxensis HAW-EB4]
TATTGCGGGGTTTGTCACGTTT
>Shal_1682(SO2757) Score=3.9 Pos=-225 [Shewanella halifaxensis HAW-EB4]
ATTTGATATCAATATCACTTTT
>Shal_2256(fumB) Score=4.3 Pos=-162 [Shewanella halifaxensis HAW-EB4]
AAATGTGATGTTTAACTCAAAC
>Shal_2887(ompW) Score=4.8 Pos=-111 [Shewanella halifaxensis HAW-EB4]
ATTTTTGATTCAGGTCAAATTT
>Shal_0099(SO4503) Score=4.5 Pos=-85 [Shewanella halifaxensis HAW-EB4]
AAATGTGATCTACTACTAATTT
>Shal_0099(SO4503) Score=4.2 Pos=-181 [Shewanella halifaxensis HAW-EB4]
TAGTTTGAACTAGATCAACTAT
>Shal_2778(mtrD) Score=4.5 Pos=-305 [Shewanella halifaxensis HAW-EB4]
TTATGTGATAAATATCTCAACT
>Shal_2778(mtrD) Score=4.6 Pos=-184 [Shewanella halifaxensis HAW-EB4]
AAACTTGACACAGATCACACTT
>Shal_1587 Score=4 Pos=-80 [Shewanella halifaxensis HAW-EB4]
TAGTGTGATTGATATCTATAAT
>Shal_0488(purH) Score=4.1 Pos=-182 [Shewanella halifaxensis HAW-EB4]
TATTGTGAAATCGCGCAGAAAA
>Shal_3986(ygbA) Score=4 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TTTTGTGCACATCTTCAAACTT
>Shal_3899(frdA) Score=3.9 Pos=-138 [Shewanella halifaxensis HAW-EB4]
GTTTGTGATCTACGTCTAATAG
>Shal_3899(frdA) Score=4.2 Pos=-106 [Shewanella halifaxensis HAW-EB4]
TGTAGTGACACTGATCACGAAA
>Shal_3898(fdrC2) Score=4.1 Pos=-94 [Shewanella halifaxensis HAW-EB4]
TTTGTTGATCTATCTCACGGTT
>Shal_2336(sodB) Score=3.7 Pos=-93 [Shewanella halifaxensis HAW-EB4]
AACAATGATACACTTCACAACT
>Shal_1567(SO2806) Score=4.7 Pos=-84 [Shewanella halifaxensis HAW-EB4]
AATTGTGAACAACATCACACAG
>Shal_1891(SO2535) Score=4.2 Pos=-199 [Shewanella halifaxensis HAW-EB4]
TTTTGAGGTTTATCTCACAATT
>Shal_3518(SO0939) Score=4.2 Pos=-328 [Shewanella halifaxensis HAW-EB4]
AAATGAGAGGTTAATCACACAG
>Shal_3518(SO0939) Score=4.7 Pos=-250 [Shewanella halifaxensis HAW-EB4]
TAATGTGCTATCGGTCACAGAA
>Shal_0481(yniC) Score=4.5 Pos=-286 [Shewanella halifaxensis HAW-EB4]
AAGTATGAATCCGATCACATTT
>Shal_3640 Score=3.8 Pos=-165 [Shewanella halifaxensis HAW-EB4]
TTACGTGATCGAGCGCTAGTTT
>Shal_3640 Score=4.3 Pos=-104 [Shewanella halifaxensis HAW-EB4]
AAGTTTGACAGTGTTCAAATAT
>Shal_1257(SO3406) Score=4 Pos=-301 [Shewanella halifaxensis HAW-EB4]
TAGCTTGATTTTTATCACTCTT
>Shal_1257(SO3406) Score=4.2 Pos=-140 [Shewanella halifaxensis HAW-EB4]
ATTTGAGAGCTATATCGCAGTT
>Shal_3174(Spea_3089) Score=4.5 Pos=-268 [Shewanella halifaxensis HAW-EB4]
TTCCGTGATCAATATCACCTTA
>Shal_3174(Spea_3089) Score=3.7 Pos=-40 [Shewanella halifaxensis HAW-EB4]
ATTTGAGATTCTATTTACAACT
>Shal_3970(SO1410) Score=4.1 Pos=-156 [Shewanella halifaxensis HAW-EB4]
ATTCGCGACTTGGCTCACGAAT
>Shal_3970(SO1410) Score=4.1 Pos=-115 [Shewanella halifaxensis HAW-EB4]
CTGCGTGATCCAATTCAACTTT
>Shal_0693(Sputcn32_1188) Score=4.4 Pos=-287 [Shewanella halifaxensis HAW-EB4]
TATTGTGACAAGACTCAACTTA
>Shal_0693(Sputcn32_1188) Score=4 Pos=-110 [Shewanella halifaxensis HAW-EB4]
AATTGTGACCACAATCAATTTG
>Shal_0881(fkpA) Score=4.1 Pos=-99 [Shewanella halifaxensis HAW-EB4]
TAATCTGATTGGAATAACCTAT
>Shal_3589(cydD) Score=4.1 Pos=-233 [Shewanella halifaxensis HAW-EB4]
TTTATTGATCTAGCTCAATTTT
>Shal_1683(Swoo_2741) Score=4.4 Pos=-108 [Shewanella halifaxensis HAW-EB4]
AAAAGTGATATTGATATCAAAT
>Shal_4222(cytcB) Score=4.4 Pos=-95 [Shewanella halifaxensis HAW-EB4]
AAATATTACCCCGATCACATAA
>Shal_4222(cytcB) Score=4.4 Pos=-95 [Shewanella halifaxensis HAW-EB4]
AAATATTACCCCGATCACATAA
>Shal_0533(SO4138) Score=3.8 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TAGCGTGAAGGGGATCATGCTT
>Shal_3802(Spea_3717) Score=4.7 Pos=-117 [Shewanella halifaxensis HAW-EB4]
TTAGGTGATCTGCCTCACAAAG
>Shal_3127(psrA) Score=4.5 Pos=-183 [Shewanella halifaxensis HAW-EB4]
AACTGTGAATTGCTTCACAAAC
>Shal_0790(asnC) Score=3.8 Pos=-248 [Shewanella halifaxensis HAW-EB4]
ATTTATAATGATAATCACAACT
>Shal_3916(cyaA) Score=5.3 Pos=-88 [Shewanella halifaxensis HAW-EB4]
AAGCGTGATGTTGATCACATTT
>Shal_1534(fahA) Score=4.5 Pos=-144 [Shewanella halifaxensis HAW-EB4]
CAGTGTGATTTATCTCACGCTA
>Shal_3068(SO1539) Score=4.4 Pos=-114 [Shewanella halifaxensis HAW-EB4]
AATAGTGAGCAATCTCACGTTT
>Shal_4221(engB) Score=4.7 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TTATGTGATCGGGGTAATATTT
>Shal_1062(SO1326) Score=4 Pos=-210 [Shewanella halifaxensis HAW-EB4]
TAAAGTGATTTTTCTTGCAGAT
>Shal_4287(SO4743) Score=3.8 Pos=-46 [Shewanella halifaxensis HAW-EB4]
TATTGCGACTCAATTAATACAT
>Shal_0348(Spea_3921) Score=5 Pos=-42 [Shewanella halifaxensis HAW-EB4]
AAGTGTGACGCAGATCACCATT
>Shal_3793(Sama_3134) Score=4.9 Pos=-156 [Shewanella halifaxensis HAW-EB4]
AAGCGTGATCTGGTTCACGAAT
>Shal_3135(deoA) Score=4.8 Pos=-138 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCTAAATCTAATTA
>Shal_1117(swp_3747) Score=3.8 Pos=-77 [Shewanella halifaxensis HAW-EB4]
CGGTGCGATCTGTATCACTATT
>Shal_1065(cyaC) Score=5.1 Pos=-99 [Shewanella halifaxensis HAW-EB4]
TTATTTGACTTAGATCACAAAT
>Shal_0121(etfD) Score=4.2 Pos=-180 [Shewanella halifaxensis HAW-EB4]
TTTTGTGACAGTTATCACGCCA
>Shal_3603(crp) Score=3.5 Pos=-226 [Shewanella halifaxensis HAW-EB4]
AGATGTGATACAAGCCTAATTG
>Shal_0567(mccA) Score=4.1 Pos=-159 [Shewanella halifaxensis HAW-EB4]
AAGTGTGCTGTAGCGCAGATTT
>Shal_3429(SO3683) Score=4.4 Pos=-113 [Shewanella halifaxensis HAW-EB4]
GAATTTGATCTCAGTCACAATT
>Shal_0567(mccA) Score=3.9 Pos=-262 [Shewanella halifaxensis HAW-EB4]
AGTTGTGATTTTTATATCTAAA
>Shal_2671(fadI) Score=3.9 Pos=-119 [Shewanella halifaxensis HAW-EB4]
AAGTTAGAATCAGATCACACTT
>Shal_2197(ccoN) Score=4.5 Pos=-221 [Shewanella halifaxensis HAW-EB4]
AGATTTGATCTAGATCAACTTT
>Shal_2197(ccoN) Score=4.6 Pos=-178 [Shewanella halifaxensis HAW-EB4]
TTTTTTGATATAGCTCAAGTAT
>Shal_3519(cadC) Score=4.6 Pos=-227 [Shewanella halifaxensis HAW-EB4]
TTCTGTGACCGATAGCACATTA
>Shal_3519(cadC) Score=4.4 Pos=-149 [Shewanella halifaxensis HAW-EB4]
CTGTGTGATTAACCTCTCATTT
>Shal_1832(fadD1) Score=5 Pos=-155 [Shewanella halifaxensis HAW-EB4]
TTATGTGATGATAATCAAAATT
>Shal_3589(cydD) Score=4.9 Pos=-214 [Shewanella halifaxensis HAW-EB4]
TTTTGTGAGTCCGATAACATTT
>Shal_2784(mtrC) Score=4 Pos=-264 [Shewanella halifaxensis HAW-EB4]
TTTTATTACATTTATCACGTAT
>Shal_0116(SO4520) Score=4.2 Pos=-164 [Shewanella halifaxensis HAW-EB4]
AAGTATGACCCGCTTAACAAAA
>Shal_1890(fadE2) Score=4.3 Pos=-70 [Shewanella halifaxensis HAW-EB4]
AATTGTGAGATAAACCTCAAAA
>Shal_2750(nadC) Score=4.5 Pos=-250 [Shewanella halifaxensis HAW-EB4]
TAAAGAGATCGAGATCACACTA
>Shal_2750(nadC) Score=3.8 Pos=-140 [Shewanella halifaxensis HAW-EB4]
TTAAGAGATGTTTATCGCAATC
>Shal_3428 Score=4.8 Pos=-90 [Shewanella halifaxensis HAW-EB4]
AATTGTGACTGAGATCAAATTC
>Shal_0680(Sputcn32_0777) Score=3.9 Pos=-79 [Shewanella halifaxensis HAW-EB4]
GTTTTTGACTAAGATCAAAAAA
>Shal_4284(yfiA-2) Score=4.6 Pos=-83 [Shewanella halifaxensis HAW-EB4]
AAACATGACCTAGATCACACTA
>Shal_4284(yfiA-2) Score=3.8 Pos=-58 [Shewanella halifaxensis HAW-EB4]
TAATGTGATTGGACTATTGTAA
>Shal_1108(yfiA-2) Score=4.6 Pos=-76 [Shewanella halifaxensis HAW-EB4]
AAACGTGATTTAGATCACGACT
>Shal_1124(phk) Score=4.3 Pos=-56 [Shewanella halifaxensis HAW-EB4]
TATAGTGAGTTATATAAAATTT
>Shal_0535(udp) Score=4.6 Pos=-92 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCAGTTTAACCTTT
>Shal_2591(Spea_1673) Score=4.2 Pos=-312 [Shewanella halifaxensis HAW-EB4]
AGTTGTTAACTGGATCTCAAAT
>Shal_0678(SO3895) Score=4.8 Pos=-253 [Shewanella halifaxensis HAW-EB4]
GTTTGTGATGTCTATCACGTTT
>Shal_1924(gloA) Score=4 Pos=-95 [Shewanella halifaxensis HAW-EB4]
TAAATTGATCTCGCTCAATTTT
>Shal_0849(cadC) Score=4.4 Pos=-117 [Shewanella halifaxensis HAW-EB4]
TAGTGTGCTAGACCTCACGAAA
>Shal_0787(SO3987) Score=4.9 Pos=-81 [Shewanella halifaxensis HAW-EB4]
AATAGTGATGCAGATCACACTG
>Shal_3069(icd) Score=4.4 Pos=-149 [Shewanella halifaxensis HAW-EB4]
AAACGTGAGATTGCTCACTATT
>Shal_2568(rarD) Score=4.2 Pos=-85 [Shewanella halifaxensis HAW-EB4]
CAGAGTGATTCAAGTCACACTT
>Shal_0189(Swoo_4104) Score=4.8 Pos=-261 [Shewanella halifaxensis HAW-EB4]
ATGTGAGATTTGCATCACAATT
>Shal_2063(apbE) Score=4.4 Pos=-95 [Shewanella halifaxensis HAW-EB4]
TTATTTGACGCAGTTAACACAA
>Shal_1712(SO2637) Score=4.1 Pos=-140 [Shewanella halifaxensis HAW-EB4]
ATTTGTGAACTATCTGGCAATT
>Shal_3966(SO1414) Score=4.4 Pos=-78 [Shewanella halifaxensis HAW-EB4]
TGGCGTGACTTAGTTCACCTTT
>Shal_3965(SO1415) Score=4.2 Pos=-247 [Shewanella halifaxensis HAW-EB4]
ATTCGTGAGGCAGCTCTCGAAT
>Shal_3965(SO1415) Score=4.3 Pos=-138 [Shewanella halifaxensis HAW-EB4]
TTGTATGACGTAACTCACAAAG
>Shal_0100 Score=4.2 Pos=-124 [Shewanella halifaxensis HAW-EB4]
ATAGTTGATCTAGTTCAAACTA
>Shal_4072(SO0296) Score=4.3 Pos=-133 [Shewanella halifaxensis HAW-EB4]
ATAGGTGATCTTTATCATAGTA
>Shal_0387(SO0355) Score=4.3 Pos=-124 [Shewanella halifaxensis HAW-EB4]
AAGTTTGTCTTAGATCACATTT
>Shal_3744(Spea_3654) Score=4.3 Pos=-101 [Shewanella halifaxensis HAW-EB4]
AAGTGTGATCTTGGCTACAAAT
>Shal_0318(pilZ) Score=4.3 Pos=-195 [Shewanella halifaxensis HAW-EB4]
ATATTTGCTAGACATCACATTG
>Shal_0318(pilZ) Score=5 Pos=-141 [Shewanella halifaxensis HAW-EB4]
ATTCGTGATGGAAATCAAATTA
>Shal_3021(SO1482) Score=5.2 Pos=-193 [Shewanella halifaxensis HAW-EB4]
ATTTGTGACGTTGATCACCTAT
>Shal_2982(map) Score=3.7 Pos=-92 [Shewanella halifaxensis HAW-EB4]
TAATATGAAAAAAAGCACAAAC
>Shal_1266(fadE) Score=4.4 Pos=-67 [Shewanella halifaxensis HAW-EB4]
AAGTTTGATCTACAGCTCATTT
>Shal_3007(SO1603) Score=4.2 Pos=-265 [Shewanella halifaxensis HAW-EB4]
ATGTTTGAGCTAGATCACTCTT
>Shal_1245 Score=4.4 Pos=-269 [Shewanella halifaxensis HAW-EB4]
TTGTGGGATCTAGGTAACATTT
>Shal_0532(kefA) Score=4 Pos=-137 [Shewanella halifaxensis HAW-EB4]
AAGCATGATCCCCTTCACGCTA
>Shal_1064(SO1328) Score=4.6 Pos=-89 [Shewanella halifaxensis HAW-EB4]
ATTTTTGATTCAGTTCACAGTC
>Shal_3735(scrA) Score=4.2 Pos=-144 [Shewanella halifaxensis HAW-EB4]
AAATGTGGCGAAAATCACGTTA
# TF - NarP: Shal_0884
>Shal_0331(Sfri_3897) Score=4.1 Pos=-157 [Shewanella halifaxensis HAW-EB4]
CACTTCTAAAGTAGTA
>Shal_0176(narK) Score=3.9 Pos=-237 [Shewanella halifaxensis HAW-EB4]
TAATACCTAGGTGGTA
>Shal_1261(nnrS2) Score=4.6 Pos=-153 [Shewanella halifaxensis HAW-EB4]
TACCTATAAAGATATA
>Shal_0886(nrfA) Score=4.7 Pos=-98 [Shewanella halifaxensis HAW-EB4]
TACCTCGTTGGAGGTA
>Shal_0776(fccA) Score=4.3 Pos=-101 [Shewanella halifaxensis HAW-EB4]
TACCTCGAATTGAGTA
>Shal_0716(napD) Score=4.7 Pos=-119 [Shewanella halifaxensis HAW-EB4]
TACCCCTTGCGAGGTA
>Shal_2928(dmsE) Score=4.3 Pos=-69 [Shewanella halifaxensis HAW-EB4]
TACCCCCTTCGATATA
>Shal_0676(omp35) Score=4.8 Pos=-260 [Shewanella halifaxensis HAW-EB4]
TACTCCTTTAGGGATA
>Shal_3305(Shew_2655) Score=4.3 Pos=-165 [Shewanella halifaxensis HAW-EB4]
TACCTATTTGTGTGTA
>Shal_3305(Shew_2655) Score=4.6 Pos=-151 [Shewanella halifaxensis HAW-EB4]
TACCTCTAAATCGGTA
>Shal_0885(narQ) Score=4.7 Pos=-159 [Shewanella halifaxensis HAW-EB4]
TACCTCCAACGAGGTA
>Shal_3447(SO3058) Score=4 Pos=-105 [Shewanella halifaxensis HAW-EB4]
TATCGCTAATTAGGTA
>Shal_2784(mtrC) Score=5.2 Pos=-194 [Shewanella halifaxensis HAW-EB4]
TACCTCTTTAGAAATA
>Shal_2783(omcA) Score=5.1 Pos=-182 [Shewanella halifaxensis HAW-EB4]
TACCCCTAAAGAAATA
>Shal_3689(Spea_3600) Score=4.7 Pos=-109 [Shewanella halifaxensis HAW-EB4]
TATCTCTTTAGTGGTA
# TF - Fnr: Shal_2205
>Shal_2887(ompW) Score=4.4 Pos=-107 [Shewanella halifaxensis HAW-EB4]
TTGATTCAGGTCAA
>Shal_0300(nrfX) Score=4.7 Pos=-96 [Shewanella halifaxensis HAW-EB4]
TTGATTTGTATCAA
>Shal_0176(narK) Score=4.9 Pos=-184 [Shewanella halifaxensis HAW-EB4]
ATGATCTAGGTCAA
>Shal_0886(nrfA) Score=4.6 Pos=-125 [Shewanella halifaxensis HAW-EB4]
TTGATCTACCGCAA
>Shal_0108(fdhX2) Score=3.9 Pos=-199 [Shewanella halifaxensis HAW-EB4]
CTAATTTAGATCAA
>Shal_0112(fdhX2) Score=3.9 Pos=-199 [Shewanella halifaxensis HAW-EB4]
CAGATTTGGATCAA
>Shal_2261(hyaA) Score=3.9 Pos=-87 [Shewanella halifaxensis HAW-EB4]
TTGACGCATATCAA
>Shal_3179(bfr2) Score=5.2 Pos=-33 [Shewanella halifaxensis HAW-EB4]
TTGATATAGATCAA
>Shal_0175(narX) Score=4.8 Pos=-209 [Shewanella halifaxensis HAW-EB4]
TTGACCTAGATCAT
>Shal_0885(narQ) Score=4.6 Pos=-130 [Shewanella halifaxensis HAW-EB4]
TTGCGGTAGATCAA
>Shal_1065(cyaB) Score=4 Pos=-95 [Shewanella halifaxensis HAW-EB4]
TTGACTTAGATCAC
>Shal_2261(hyaA) Score=5.2 Pos=-148 [Shewanella halifaxensis HAW-EB4]
ATGATCTAGCTCAA
>Shal_0482(acnB) Score=4.3 Pos=-243 [Shewanella halifaxensis HAW-EB4]
ATAATTTAGATCAA
>Shal_2777(feoA) Score=4.3 Pos=-92 [Shewanella halifaxensis HAW-EB4]
TTGATCTAGGTAAA
>Shal_2206(uspE) Score=4.6 Pos=-73 [Shewanella halifaxensis HAW-EB4]
TTGATCTAAAACAA
>Shal_2692(nrdD) Score=5.4 Pos=-123 [Shewanella halifaxensis HAW-EB4]
ATGATCTGGATCAA
>Shal_0258(coxB) Score=4.9 Pos=-372 [Shewanella halifaxensis HAW-EB4]
GTGATCTTGATCAA
>Shal_1947(pykA) Score=4.7 Pos=-95 [Shewanella halifaxensis HAW-EB4]
TTGAGTTAGATCAT
>Shal_2428(aer) Score=3.9 Pos=-78 [Shewanella halifaxensis HAW-EB4]
TTGATAGCAATCAA
>Shal_3899(frdC2) Score=3.9 Pos=-134 [Shewanella halifaxensis HAW-EB4]
GTGATCTACGTCTA
>Shal_3589(cydD) Score=5.3 Pos=-229 [Shewanella halifaxensis HAW-EB4]
TTGATCTAGCTCAA
>Shal_2778(mtrD) Score=4.2 Pos=-363 [Shewanella halifaxensis HAW-EB4]
TTTACCTAGATCAA
>Shal_2261(hyaA) Score=3.8 Pos=-208 [Shewanella halifaxensis HAW-EB4]
GTGATCTCCATCAC
>Shal_3691(Spea_3602) Score=4.5 Pos=-80 [Shewanella halifaxensis HAW-EB4]
ATGAGCTAGCGCAA
>Shal_2489(sucA) Score=4.4 Pos=-183 [Shewanella halifaxensis HAW-EB4]
TTGATATAGCTCTA
>Shal_1352(aceB) Score=4.3 Pos=-202 [Shewanella halifaxensis HAW-EB4]
TTGTTGTAAATCAA
>Shal_1381(cydA) Score=4.4 Pos=-51 [Shewanella halifaxensis HAW-EB4]
TTGATGGGGATCTA
>Shal_2197(ccoN) Score=4.9 Pos=-174 [Shewanella halifaxensis HAW-EB4]
TTGATATAGCTCAA
>Shal_2197(ccoN) Score=5.6 Pos=-217 [Shewanella halifaxensis HAW-EB4]
TTGATCTAGATCAA
>Shal_3305(Shew_2655) Score=4.5 Pos=-79 [Shewanella halifaxensis HAW-EB4]
TTGTTTTAGATCAA
>Shal_2335(ydhD) Score=3.9 Pos=-150 [Shewanella halifaxensis HAW-EB4]
GTGAAGTGTATCAT
>Shal_0680(Sama_0549) Score=4 Pos=-75 [Shewanella halifaxensis HAW-EB4]
TTGACTAAGATCAA
>Shal_0100(SO4504) Score=5 Pos=-120 [Shewanella halifaxensis HAW-EB4]
TTGATCTAGTTCAA
>Shal_2777(feoA) Score=4.1 Pos=-275 [Shewanella halifaxensis HAW-EB4]
GTGATCTGTGTCAA
>Shal_0827(gltP) Score=4.3 Pos=-107 [Shewanella halifaxensis HAW-EB4]
GTGATACAGATCAT
>Shal_3083(lldP) Score=4.9 Pos=-214 [Shewanella halifaxensis HAW-EB4]
TTGATCTGGATCAC
>Shal_1843(Sama_1615) Score=4.1 Pos=-157 [Shewanella halifaxensis HAW-EB4]
TTGATGTTAACCAA
>Shal_0673(SO0579) Score=4.8 Pos=-123 [Shewanella halifaxensis HAW-EB4]
TTGATGTGTATCAA
>Shal_0716(napD) Score=4 Pos=-241 [Shewanella halifaxensis HAW-EB4]
TTAATGTAGCGCAA
>Shal_1381(cydA) Score=4.9 Pos=-336 [Shewanella halifaxensis HAW-EB4]
TTGATTTGAATCAA
>Shal_0716(napD) Score=4.1 Pos=-146 [Shewanella halifaxensis HAW-EB4]
TTGATCTCGGTCTA
>Shal_0099(fdhD) Score=5.2 Pos=-177 [Shewanella halifaxensis HAW-EB4]
TTGAACTAGATCAA
# TF - MetJ: Shal_0621
>Shal_3462(metH) Score=6.3 Pos=-128 [Shewanella halifaxensis HAW-EB4]
GGACGTCTATACGTAT
>Shal_3462(metH) Score=5.7 Pos=-120 [Shewanella halifaxensis HAW-EB4]
ATACGTATAAATGTCC
>Shal_0737(metY) Score=6 Pos=-61 [Shewanella halifaxensis HAW-EB4]
AGACTTCTAGATGGCC
>Shal_0843(metK) Score=5.8 Pos=-60 [Shewanella halifaxensis HAW-EB4]
AGCCGTCTAGATGTAG
>Shal_0843(metK) Score=5.2 Pos=-52 [Shewanella halifaxensis HAW-EB4]
AGATGTAGATACTTCT
>Shal_3286(btuB) Score=5.8 Pos=-453 [Shewanella halifaxensis HAW-EB4]
AGACATTTAACCGTAT
>Shal_3286(btuB) Score=6.5 Pos=-445 [Shewanella halifaxensis HAW-EB4]
AACCGTATAGACGTCT
>Shal_1732(metC) Score=5.1 Pos=-10 [Shewanella halifaxensis HAW-EB4]
GGCCGTTTAGATGTTA
>Shal_1732(metC) Score=5.3 Pos=-2 [Shewanella halifaxensis HAW-EB4]
AGATGTTAAGATGGCT
>Shal_2885(COG3126) Score=6 Pos=-48 [Shewanella halifaxensis HAW-EB4]
GGACATATAGACTTCC
>Shal_2885(COG3126) Score=6.6 Pos=-40 [Shewanella halifaxensis HAW-EB4]
AGACTTCCAGATGTCT
>Shal_2885(COG3126) Score=5.4 Pos=-32 [Shewanella halifaxensis HAW-EB4]
AGATGTCTTAATGTAT
>Shal_0622(metB) Score=7.2 Pos=-50 [Shewanella halifaxensis HAW-EB4]
AGACGTCCAGACATCT
>Shal_0621(metJ) Score=6 Pos=-169 [Shewanella halifaxensis HAW-EB4]
GGACGTCTAAATGTAC
>Shal_0621(metJ) Score=6.6 Pos=-124 [Shewanella halifaxensis HAW-EB4]
AGCCGTTTAGACGTCC
>Shal_0624(metF) Score=6.4 Pos=-65 [Shewanella halifaxensis HAW-EB4]
GGACATATAGACGTCC
>Shal_0624(metF) Score=7.1 Pos=-57 [Shewanella halifaxensis HAW-EB4]
AGACGTCCAAACGTCT
>Shal_0735(metT) Score=7.1 Pos=-91 [Shewanella halifaxensis HAW-EB4]
AAACATCTAGACGTCT
>Shal_0735(metT) Score=5.3 Pos=-83 [Shewanella halifaxensis HAW-EB4]
AGACGTCTAAATTGAC
>Shal_0622(metB) Score=6.3 Pos=-103 [Shewanella halifaxensis HAW-EB4]
GGACGTCTAAACGGCT
>Shal_0621(metJ) Score=7 Pos=-177 [Shewanella halifaxensis HAW-EB4]
AGATGTCTGGACGTCT
>Shal_2236(msrA) Score=5 Pos=-63 [Shewanella halifaxensis HAW-EB4]
AGCCATCTAAGTGGCT
>Shal_2236(msrA) Score=7 Pos=-71 [Shewanella halifaxensis HAW-EB4]
AGACGTCTAGCCATCT
# TF - SO2282: Shal_1726
>Shal_1726(SO2282) Score=7.6 Pos=-85 [Shewanella halifaxensis HAW-EB4]
AATTGTATGCATACAAAA
>Shal_1726(SO2282) Score=7.8 Pos=-7 [Shewanella halifaxensis HAW-EB4]
TATTGTCATGGTACAATC
>Shal_1727(PF01810) Score=7.6 Pos=-94 [Shewanella halifaxensis HAW-EB4]
TTTTGTATGCATACAATT
>Shal_1727(PF01810) Score=7.8 Pos=-173 [Shewanella halifaxensis HAW-EB4]
GATTGTACCATGACAATA
# TF - TsrR: Shal_0577, Shal_0561
>Shal_0567(tsrA) Score=4.7 Pos=-287 [Shewanella halifaxensis HAW-EB4]
CTTTTTTGCGATTCAAAAAACG
>Shal_0567(tsrA) Score=6 Pos=-257 [Shewanella halifaxensis HAW-EB4]
TGATTTTTATATCTAAAAAGAT
>Shal_0551(tsrA) Score=5.5 Pos=-263 [Shewanella halifaxensis HAW-EB4]
ATCCTTTTAGATGTCAAAAGGT
>Shal_0550(ccmF-2) Score=5.5 Pos=-314 [Shewanella halifaxensis HAW-EB4]
ACCTTTTGACATCTAAAAGGAT
# TF - PhsR: Shal_3129
>Shal_3127(phsA) Score=6.3 Pos=-239 [Shewanella halifaxensis HAW-EB4]
CAATATGTGGTTTACCACAATTTA
>Shal_3127(phsA) Score=6.4 Pos=-145 [Shewanella halifaxensis HAW-EB4]
CAGTATGTGGTTTACCACAATATC