# TF - NadQ: Atu4099
>Atu4098(nadA) Score=5.9 Pos=-2 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATATGCTCACAATGAGAATAT
# TF - NrdR: Atu1166
>Atu1733(nrdJ) Score=5 Pos=-416 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACACAATATCTTGTGG
>Atu1733(nrdJ) Score=4.6 Pos=-296 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTCCATATTTAGCGT
>Atu1733(nrdJ) Score=5.3 Pos=-170 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACACTATATATAGTAG
>Atu1733(nrdJ) Score=4.2 Pos=-137 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACACGAGATACAGGGA
>Atu0068(nrdH) Score=5 Pos=-534 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATACTATATGTGGTGT
# TF - SahR: Atu2124
>Atu2124(sahR) Score=7.1 Pos=-47 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACATAAAGATATCTTTATAT
>Atu2155(metH) Score=6.8 Pos=-66 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACATAAACATATCTTTATGT
>Atu0362(metK) Score=6.4 Pos=-91 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACATAAAGATATATTTATGT
>Atu0029(ahcY) Score=6.1 Pos=-111 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACATAAAGACTTCTTTATAT
# TF - Zur: Atu1518
>Atu3181(yciC2) Score=5.9 Pos=-120 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATATGTAATGTTATTACGTTAC
>Atu1521(znuA2) Score=5.6 Pos=-45 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAAATGTAATAACATAACTATAC
>Atu1520(znuC2) Score=5.5 Pos=-82 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTATAGTTATGTTATTACATTTA
>Atu1049(zinT) Score=6.1 Pos=-58 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAAATGTAATGTTATTACGTTAC
>Atu4502(yciC) Score=5.4 Pos=-142 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATAACGTTATTTCATAACAAAAT
>Atu3180(znuC) Score=5.8 Pos=-203 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTAACGTAATAACATTACATATG
>Atu3180(znuC) Score=5.9 Pos=-91 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTAATGTTATTTCATTACATATT
>Atu3180(znuC) Score=5.8 Pos=-61 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGAATGTAATAACATTACATATC
>Atu3181(yciC2) Score=5.9 Pos=-262 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATATGTAATGTTATTACATTCG
# TF - NnrR: Atu4380
>Atu4382(nirK) Score=4.8 Pos=-181 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGCGAACAGGCAAAG
>Atu4382(nirK) Score=4.5 Pos=-95 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTTGTTCCATCTCAAAT
>Atu8040 Score=5 Pos=-67 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGCGGTCGGTCAAAG
>Atu4392(nnrU) Score=5 Pos=-247 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGCGGTCGGTCAAAG
>Atu4383(nnrS) Score=4.5 Pos=-159 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTGAGATGGAACAAAC
>Atu4383(nnrS) Score=4.8 Pos=-73 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGCCTGTTCGCAAAG
>Atu4391(norE) Score=5 Pos=-76 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGACCGACCGCAAAG
>Atu4396(nnrX) Score=4.9 Pos=-75 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGCGTTCGCTCAAAC
>Atu4394(ubiD) Score=4.7 Pos=-20 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTGCGGCAGCGCAAGG
>Atu4389(norC) Score=4.9 Pos=-138 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTTGCCAAATGGCAAAG
# TF - HutC: Atu3799, Atu0160, Atu3936
>Atu3935(hutF) Score=5.4 Pos=-88 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAAATGTATATACATAAT
>Atu3800(hutX) Score=4.2 Pos=-165 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAGTTGTATAGTGAACTT
>Atu0157(hisX) Score=4.8 Pos=-35 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTTGTCTAGACAAATG
>Atu3934(hutI) Score=5.4 Pos=-43 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTATGTATATACATTTA
>Atu3799(hutC) Score=4.2 Pos=-136 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAGTTCACTATACAACTT
# TF - HypR: Atu4674
>Atu4676(hypS) Score=3.5 Pos=-52 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTGTATACTTTA
>Atu4676(hypS) Score=4.2 Pos=-232 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATGAGTATACAAAA
>Atu4674(hypR) Score=4.7 Pos=-25 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTATGTCGACAAGA
>Atu4676(hypS) Score=3.7 Pos=-41 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTATGTATTCAAAA
>Atu4675(hypD) Score=5.1 Pos=-99 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTTGTCGACAAAT
>Atu4678(hypM) Score=4.2 Pos=-100 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTGTATACTCAT
# TF - RirA: Atu0201
>Atu2771(bfr) Score=4.5 Pos=-322 [Agrobacterium tumefaciens str. C58 (Cereon)]
CtTGACatTTActGTCcTG
>Atu2287(shmR) Score=4.6 Pos=-137 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGACAGTGATCGTCATG
>Atu3387(fecI) Score=5.2 Pos=-131 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGATAATAATTGTCATG
>Atu2287(shmR) Score=4.8 Pos=-164 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATGATTCAAAAAGTCATA
>Atu0409(fhuA1) Score=4.1 Pos=-82 [Agrobacterium tumefaciens str. C58 (Cereon)]
CCTGATGTAAACACTCATC
>Atu2383(PF10087) Score=4 Pos=-93 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTACTCCAAAACTCATC
>Atu3385(hmuR) Score=4.5 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGAGTAATCCGGTCAAG
>Atu2383(PF10087) Score=3.7 Pos=-118 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATGAGGAAAATCATCACC
>Atu3391(irp6A) Score=4.8 Pos=-62 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGACTAGTACAGTCAGA
>Atu0201(rirA) Score=4.7 Pos=-146 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGACTTGTTTGTTCATG
>Atu2288(PF06904) Score=3.9 Pos=-191 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAAGACATGACTGGTCAAG
>Atu0202(fbpA) Score=4.7 Pos=-31 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATGAACAAACAAGTCAAG
>Atu0407(fbpA) Score=4.3 Pos=-66 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGATTTGCGCCGTCATG
>Atu1825(sufS2) Score=4.3 Pos=-157 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGACGAACTGTGTCATC
>Atu0881(cycF) Score=3.9 Pos=-149 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTAGACTTCTGTTTTCACG
# TF - Irr: Atu0153
>Atu2473(fatB) Score=5.3 Pos=-130 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTCAGAACCGTTCTAAAAC
>Atu0288(iprA) Score=5.5 Pos=-107 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTTTCAAAGCATTCTAAACT
>Atu4022(fhuA) Score=5.6 Pos=-168 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGATTTGAATAATTCCAAGCT
>Atu0202(fbpA) Score=5.7 Pos=-113 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTTAGAACAATTCCAGAAA
>Atu2613(hemA) Score=5.2 Pos=-117 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTATTGGAATGGTTCAAAACA
>Atu0351(fssA) Score=5.7 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTTGGAAGAATTCTAAATT
>Atu0251(mbfA) Score=6.2 Pos=-32 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATTTAGAATTATTCTAAAAA
>Atu0251(mbfA) Score=5.4 Pos=-79 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGTTAGAATTATTCTAAAAC
>Atu0201(rirA) Score=5.7 Pos=-66 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTCTGGAATTGTTCTAAACT
>Atu3391(irp6A) Score=5.1 Pos=-89 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTAAGAATGGCTCTAAAAC
>Atu3916(irgA) Score=5.7 Pos=-92 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTTAGAACTGTTCGAAAAC
>Atu1350(fdx) Score=5.4 Pos=-39 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTTTAGAACAATTCTCAGAT
>Atu1825(sufS2) Score=6.6 Pos=-125 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTTAGAATAATTCGAAACT
# TF - NagQ: Atu2606
>Atu2606(nagQ) Score=-2 Pos=-233 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATGCCAAAACAATACCA
>Atu2604(nagD1) Score=6.1 Pos=-236 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGGCATTTTTTTGGTATT
>Atu2604(nagD1) Score=6.1 Pos=-225 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGGTATTGTTTTGGCATC
>Atu2606(nagQ) Score=-1.5 Pos=-222 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATACCAAAAAAATGCCA
# TF - GlcC: Atu0662
>Atu0664(lysR) Score=4.9 Pos=-85 [Agrobacterium tumefaciens str. C58 (Cereon)]
AACTGGTATTCTTTCTTTACCACTT
>Atu0662(glcC) Score=4.9 Pos=-90 [Agrobacterium tumefaciens str. C58 (Cereon)]
AACTGGATAGAATAATTGACCAGTA
>Atu0665(glcD) Score=5.6 Pos=-51 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAGTGGTAAAGAAAGAATACCAGTT
# TF - NtrC: Atu1446
>Atu3905(nrtA) Score=4.6 Pos=-300 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGATTAAAATTTAATCG
>Atu1444(nifR3) Score=4 Pos=-31 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTCTAAAAATAATGCA
>Atu1769(glnB) Score=4.1 Pos=-297 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGACCAAATAATAGTCA
>Atu1769(glnB) Score=4.5 Pos=-278 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGCACAAAATATAAACA
# TF - Mur: Atu0354
>Atu4471(sitA) Score=6.1 Pos=-79 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGAGAATGATTTGCAAT
>Atu4471(sitA) Score=4.9 Pos=-27 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGCGAGTTAATCGCAAC
>Atu1736(mntH) Score=5.7 Pos=5 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATGAGAATGATTTGCAAT
# TF - ModE: Atu2564
>Atu2561(modA) Score=5.1 Pos=-81 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATATATCCTTGAAAATATAAT
>Atu2561(modA) Score=5.6 Pos=-39 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTATATTCATCGGAATACATC
# TF - LexA: Atu1395
>Atu1513(uvrA) Score=5.4 Pos=-149 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCCTTTTTTGTTC
>Atu0721(PF04055) Score=5.2 Pos=-179 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCTTGTATTGTTC
>Atu3724(ruvC) Score=5 Pos=-58 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGTCGTTTTGTTC
>Atu0311(yifB) Score=5 Pos=-97 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCTTGTTTTATTC
>Atu0311(yifB) Score=4.4 Pos=-170 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCTCCCGGTTTGTTC
>Atu1395(lexA) Score=5.1 Pos=-52 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCTGTATTTGTTT
>Atu1874(recA) Score=0.8 Pos=-74 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAATAGAGTAC
>Atu1874(recA) Score=-0.2 Pos=-142 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAACGAAAGCAGAAC
>Atu1077(radA) Score=-0.4 Pos=-24 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAACAAGAAGAAAAC
>Atu2057(uvrD) Score=0.1 Pos=-57 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAATAAAAGCAGAAC
>Atu0365(rmuC) Score=5.3 Pos=-9 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCTTGTTTTGATC
>Atu2753(mgpS) Score=0.5 Pos=-291 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAAAACGGAAT
>Atu1292(dnaE) Score=0.9 Pos=-239 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAAATGAGAAC
>Atu5098(imuA) Score=1.4 Pos=-76 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAACAATGAAC
>Atu3230(imuA) Score=0.8 Pos=-53 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAAACAAGAAC
>Atu2026(PF01443) Score=4.5 Pos=-58 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTCATCTTTCGTTC
>Atu4619(uvrD2) Score=5.1 Pos=-134 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCAGCATTTGTTC
>Atu2182(greA) Score=4.9 Pos=-215 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCACTATATGTTC
>Atu2001(uvrB) Score=4.5 Pos=-71 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTTCCTTTTTGTAC
>Atu1294(dinP) Score=5.2 Pos=-88 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTCTGGTTTTGTTT
>Atu1512(ssb) Score=0.9 Pos=-172 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAACAAAAAAGGAAC
# TF - LiuR: Atu1546
>Atu0732(acdH2) Score=6.4 Pos=-71 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGACGTTTACGTAAAA
>Atu1009(PF09917) Score=5.4 Pos=-208 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTACGTGAACGTCAAA
>Atu0501(acdH) Score=5.2 Pos=-84 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTGACGTTTACGCGCAC
>Atu0501(acdH) Score=4.6 Pos=-78 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTTACGCGCACGTCAAA
>Atu2639(mdh) Score=6 Pos=-160 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTTACGTTTACGTAAGA
>Atu1546(liuR1) Score=5 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGACTTTTACGTGAAG
>Atu1546(liuR1) Score=4.8 Pos=-50 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTACGTGAAGGTCAAA
>Atu0994(etfD) Score=5.2 Pos=-231 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATTACGTGCACGTAAAA
>Atu0405(fadD) Score=5.9 Pos=-243 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGACGTTTACGTTAGA
>Atu0415(PF03060) Score=4.7 Pos=-37 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACTTACGTGCGCGTAAAC
>Atu3595(etfB) Score=5.6 Pos=-160 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTACGTTAACGTCAAC
# TF - XylR: Atu3577
>Atu3576(xylF) Score=5.4 Pos=-107 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTTCTCGACTGTCGAGAAAAT
>Atu3577(xylR) Score=5.4 Pos=-148 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTTCTCGACAGTCGAGAAAAT
# TF - RutR: Atu2384
>Atu0126(pntD) Score=4.7 Pos=-164 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTTTTCCACCGGGTCAAAA
>Atu2384(rutR) Score=5.4 Pos=-153 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTGACCGGCTGGTAAACA
>Atu3604(hpt) Score=5.1 Pos=-46 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTTACTGAAAGGTAAAAT
>Atu2500(rutA) Score=5.2 Pos=-101 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTATCCATTTGATAAAAT
>Atu2500(rutA) Score=5.9 Pos=-157 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTTACCAAATGATAAAAA
>Atu2385(pydC) Score=5.2 Pos=-145 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTTTACCAGCCGGTCAATT
# TF - VanR: Atu1419
>Atu1419(vanR) Score=4.1 Pos=-195 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGAATACA
>Atu1419(vanR) Score=4.9 Pos=-79 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATACA
>Atu1419(vanR) Score=4.9 Pos=-279 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATACA
>Atu1418(metF) Score=4.9 Pos=-36 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATACA
>Atu1420(gcvT) Score=4.1 Pos=-225 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGAATACA
>Atu1420(gcvT) Score=4.9 Pos=-37 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATACA
>Atu1418(metF) Score=4.9 Pos=-236 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATACA
>Atu1418(metF) Score=4.1 Pos=-120 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTATTCA
# TF - PhnF: Atu0182
>Atu0181(phnG) Score=6.4 Pos=-33 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGTCTATATCAATAGACAT
>Atu0182(phnF) Score=6.4 Pos=-69 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATGTCTATTGATATAGACAA
# TF - EutR: Atu2145
>Atu2144(eutA) Score=5.1 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTGAAGAATTCTTTTCGTC
>Atu2144(eutA) Score=5.1 Pos=-98 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATGAAGAGAAAATTTCAAA
>Atu2145(eutR) Score=5.1 Pos=-94 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTGAAATTTTCTCTTCATT
>Atu2145(eutR) Score=5.1 Pos=-136 [Agrobacterium tumefaciens str. C58 (Cereon)]
GACGAAAAGAATTCTTCACA
# TF - AduR: Atu4420
>Atu4420(aduR) Score=7.2 Pos=-36 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTGATTAAACGTTTAATCAG
# RNA - Cobalamin
>Atu0068(nrdH) Score=126.6 Pos=-531 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTATATGTGGTGTTCAAGGTTCTTCCGATTCGCTAGGGTTGGGAGCTAAGACGGGAATTCGGTGCGTAACGCCATCACGGCGGAGCAAGGCCGAAACTGCCCCCGCAACTGTGAGCGGCGAGCATCGTTCCGATTTGAGCCACTGGAGCCAAAAGCTCCGGGAAGGCTGGAATAGATGTTGTGACCCGCAAGTCAGGAGACCTGCCTTGAGCGCAAATGTCCACGG
>Atu1654(bluB) Score=105.7 Pos=-310 [Agrobacterium tumefaciens str. C58 (Cereon)]
CCCATAGCTTCTCCGGTCAGGTGCCCGCCCTTGCGGCGGGAGAATCGGGAATCCGGTGAAAGACCGGAACGTGCCCAACGCTGTAAGGCGGATGCTCTTTTTCTCATGCCACTGAAGCAATTCGGGAAGGCGAAAGGGGCGGATGAAGCTTAGTCAGAAGACCGGCCTGGCAGGATAGACCGAAC
>Atu0883(cbtB) Score=122.3 Pos=-388 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATAACATGTCCGTGATGGTTCCTTCCGGGCGTTCCGGAAGGTGAAAAGGGAACACGATAGGGACAAATCCTCATTCGTGGCTGCCCCCGCAACTGTGAGCGGAGAGCCTGAAACGAAATGCCACTGGCAAGCCATCTCGCCTCCATCAAGGGGGAAGGCAATGCCGGGAAGGTGTTTCAGGTTTTGACCCGTAAGCCAGGAGACCTGCCATCACGGAAATATCCATGCC
>Atu3826(achX) Score=132.7 Pos=-305 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATTGGTTAGCCATCGTGGTTCTGCGGACGAAGGTCCGGAGCTAAGAGGGAATTCGGTGAGGGCTTTAATCACAGCCTGAATCCGAAGCTGCCCCCGCAACTGTAAGCGACGAGCGAAAGTCCATCATGTCACTGAGGCCGGCCTCGGGAAGACGGACCAAAGCTATGACCCGCAAGCCAGGAGACCTGCCGCGATAGATAACGTCCACGG
>Atu3396(btuF) Score=114.4 Pos=-394 [Agrobacterium tumefaciens str. C58 (Cereon)]
CCTTATGTGAGAAAGCGACGGTTCCTACAGCCGAAAGGCGAAGGGATTAATAGGGAACATGGTGCGGGCGATCTTTTTCGTCCAATGCCTTGGCTGCCCCCGCAACTGTAAGCGGATTGTTGTTCATCCCAGTGACGCTTGAAGGCGTCATGCCACTGTTTTTTTCGGAATGCGGGAAGGCAGATGAGGGACGCAAATCCGTGAGCCAGGAGACCTGCCGTCAAAATGGAAACCATC
>Atu2806(cfrX) Score=129.9 Pos=-304 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTAAGGGTAAGGGACTGACGGTCTTTTCCCGGCAACGGGAAAAGCTAAGAGGGAACACGGTTCCGCCCCGAGAAAGGGTCATTCCGTGGCTGCCCCCGCAACTGTAAGCGGTAAGCCCGCACCGTAAAGCCACTGAACCTTTATGATCGGTTCGGGAAGGCGGTGACAGGGTGTTGATAGCCGCAAGCCAGGAGACCTGCCGTTTCAGGAAAAAGCGTC
# RNA - FMN
>Atu1895(ribB) Score=112.6 Pos=-270 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGTTCTCAGGGCGGGGTGCAATTCCCCACCGGCGGTATCGGGATTTGTCCCGGAGCCCGCGAGCGCTTCCGGTCTCCAAAGCCGGAAGGTCAGCAGATCCGGTGAGAGGCCGGAGCCGACGGTATAGTCCGGATGGAAGAGGACAAGGCA
# RNA - TPP
>Atu2714(thiB) Score=67.4 Pos=-149 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTTGATCTAACGGGGTGTCTTCTGTGCTTTTGTGCAGAAGGCTGAGAGGCTTGCCAACCCGAAGAACCTGATCCGGTTCATACCGGCGGAGGGATTAGACGGCTTAAAGGC
>Atu2569(thiC) Score=72.7 Pos=-208 [Agrobacterium tumefaciens str. C58 (Cereon)]
GGCCATTCACCAGGGGTGTCCCGTCAAGGGGCTGAGATTCTGCTTTCATGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCAAAGACCTGATG
>Atu3286(thiX1) Score=74.3 Pos=-227 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCTCTTCCGAGGGGAGCACCAGACGGTGCTGAGATGGTGGTGAACCGGACCCTTGAACCTGATCCGGGTCATGCCGGCGTAGGAACGGAACTGTCGTGCGCTCG
# RNA - serC
>Atu3707(serC) Score=62 Pos=-52 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCGGCAGGACACCTCTCCCTAACGAGAGGCGCCTATCTGAAAGGGTAGTCAAA
# RNA - speF
>Atu3196(speF) Score=292 Pos=-404 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGCTGCCCAAAGTCGCACGTGCCCATGTGTGTCCGCCGAGTCCTCGATGTGGTGAGGATTTAGGTAAGGTACCTGGAACTAACCCCTCCAGTCGCTATTCCGGCCAACCGGGAAATGCGAGGACATATGAAGCAACGACGGTGCGGGCCTTTCTGGTTCTCTGCCGGCTTTCCATCAGCCGGGGTACTGAAGAGGCACACCATCATTGCCTGAAGTGCGGTCGGGTCATTCCCTCCAATCGATGGCAGACAAAGCCGAATGATGCTCTGGCAGGGCATCGTTCACATTCGCGCCTTGAGCGTATGCTATCGA
# RNA - Glycine
>Atu1464(gcvT) Score=41.3 Pos=-155 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACGACGGAACTCTGGAGAGAAGCCACCTTGACTAAAGGACGGCTCGCCGAAGGGATAACAATCTCAGGCGACAAGGACAGAGGGGGCTCT
>Atu1464(gcvT) Score=58.8 Pos=-240 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGCATCATCGTTGGGAGAAACCGCTTCATTGCGGTGCCGAAGGAGCAACCGCCCCGGAAACTCTCAGGCAAAAGGACCAGCGATG
# RNA - SAM_alpha
>Atu2718(metA) Score=71.2 Pos=-159 [Agrobacterium tumefaciens str. C58 (Cereon)]
AACGCCTCAGTGGTGATTTGCCGACCGGCTTGCAGCCACTTTAAAGAAGTCGCTAAAGGGTCGAGGAAAAGGGCAATT
>Atu0432(metY) Score=80.2 Pos=-123 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAGCTTATCCCGTGGTGATTTGGCCGGTCGGCTTGCAGCCACGTTAAACAAGTGGCTAAAAAGACCGGGTGCTAGGAACC
# RNA - Trp_leader
>Atu2289(trpEG) Score=18 Pos=-137 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACTGGTGGTGGAGCAGCTTTTTGCGGCCTTGACCAGTCATGTCTTCAGACAAAGTCCAAGCCGCCCGAATTTTCAGGCGGCTTTTTTGTTA
# RNA - ybhL
>Atu2682(ybhL) Score=69.2 Pos=-78 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGGCTTGCTGAAGCTCCGCAGCGGCGCCCGGGAGGTATCCCGACACCGTAGCAATCACGGAGCTCAAAA
# TF - RhaR: Atu3486
>Atu3486(rhaR) Score=6.4 Pos=-111 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCAATCA---ACGATCA
>Atu3486(rhaR) Score=6.7 Pos=-60 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGATCG---TTGATTG
>Atu3485(rhaEW) Score=6.7 Pos=-107 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATGATCG---TTGATTG
>Atu3485(rhaEW) Score=6.4 Pos=-158 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCAATCA---ACGATCA
>Atu3485(rhaEW) Score=5.6 Pos=-117 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATGAAAA---ATGATCG
# TF - AglR: Atu0590
>Atu0590(aglR) Score=5.5 Pos=-76 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATCTAAAGCGCTTTGGGAA
>Atu0590(aglR) Score=6.1 Pos=-233 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAATCAAAGCGCTTTGGCTA
>Atu0591(aglE) Score=5.5 Pos=-221 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTCCCAAAGCGCTTTAGATT
>Atu0591(aglE) Score=6.1 Pos=-64 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAGCCAAAGCGCTTTGATTG
# TF - ThuR: Atu3337
>Atu3337(thuR) Score=6.6 Pos=-78 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTGAAATCGTTTTCAATT
>Atu3337(thuR) Score=5 Pos=-230 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTGAAAGCGCTTTTGACT
>Atu3338(thuE) Score=6.6 Pos=-210 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTGAAAACGATTTCAATT
>Atu3338(thuE) Score=5 Pos=-58 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTCAAAAGCGCTTTCAATT
# TF - RL3595: Atu5393
>Atu5393(RL3595) Score=7 Pos=-109 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAATGGGAACGTTCCCGTTA
>Atu5394(PF00701) Score=7 Pos=-82 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAACGGGAACGTTCCCATTA
# TF - PckR: Atu4505
>Atu3740(fba) Score=5 Pos=-90 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATTTCAATCGTTTCAATGA
>Atu3740(fba) Score=5.4 Pos=-109 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTTCAAACGATTGAAATC
>Atu0035(pckA) Score=5.4 Pos=-127 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTTTAAATCGATTAATATA
>Atu2639(mdh) Score=5.1 Pos=-136 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGATCTAAACGATTGAAAAT
>Atu0035(pckA) Score=5.1 Pos=-157 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTCTTCAACCGATTTAAAAA
>Atu0600(zwf) Score=5.5 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTTAAATCGATTAGATTA
>Atu0185(mgsA) Score=5.3 Pos=-40 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCTTCAAATCGATTTAATTC
>Atu2645(sdhC) Score=4.8 Pos=-163 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGAACCAATCGATTAAATTC
>Atu4505(pckR) Score=4.1 Pos=-69 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTTTAAATTGTTTAATTGC
>Atu4494(eda) Score=5 Pos=-36 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATTTCAATCGTTTCAATCG
>Atu3760(COG3931) Score=4.8 Pos=-135 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAGTTTAATCGATTATATTG
>Atu3761(COG5480) Score=4.8 Pos=-23 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAATATAATCGATTAAACTC
>Atu0401(scrK) Score=5.2 Pos=-51 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGTCTAAATCGATTTAAGTT
# TF - HrcA: Atu0328
>Atu0683(groS) Score=6.6 Pos=-85 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTGGCACTCCAACAAGGGGAGTGCTAA
# TF - SocR: Atu5007
>Atu5007(socR) Score=6 Pos=-104 [Agrobacterium tumefaciens str. C58 (Cereon)]
TACTGAGACCGGTCTCAATG
>Atu5006(socA) Score=6 Pos=-141 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATTGAGACCGGTCTCAGTA
>Atu5007(socR) Score=6.3 Pos=-83 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAATGAGACCGGTCTCTTTG
>Atu5006(socA) Score=6.3 Pos=-162 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAAAGAGACCGGTCTCATTC
# TF - RbsR2: Atu3062
>Atu3062(rbsR2) Score=6.3 Pos=-86 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTTGTAAACCGGTTTAGTAA
>Atu3062(rbsR2) Score=6.2 Pos=-73 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTAGTAAATCGCTTTACAAA
# TF - RhiR: Atu4556
>Atu4564(rhiL) Score=6.2 Pos=-171 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAATGAAATTATTTTCACGA
>Atu4564(rhiL) Score=6.2 Pos=-31 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGTGAAAATGTTTTCATTG
>Atu4562(rhiX) Score=6.2 Pos=-183 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAATGAAAACATTTTCACAA
>Atu4562(rhiX) Score=6.2 Pos=-43 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCGTGAAAATAATTTCATTA
# TF - PsiR: Atu4743
>Atu4744(psiA) Score=6.4 Pos=-288 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGCACCATCGATTGTGCAG
>Atu4743(psiR) Score=5.8 Pos=-116 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATGCACAATCGATATTGCCA
>Atu4743(psiR) Score=6.4 Pos=-94 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTGCACAATCGATGGTGCAA
>Atu4744(psiA) Score=5.8 Pos=-266 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGGCAATATCGATTGTGCAT
# TF - SMb20537: Atu3107
>Atu3107(SMb20537) Score=5.5 Pos=-69 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTCTTGCAAATTTTCTTAGT
>Atu3106(SMb20538) Score=5.5 Pos=-69 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACTAAGAAAATTTGCAAGAA
# TF - SmoR: Atu3162
>Atu3165(smoE) Score=5.2 Pos=-114 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAATTTACGCATGTATTGTT
>Atu3166(fruK) Score=5.2 Pos=-285 [Agrobacterium tumefaciens str. C58 (Cereon)]
AACAATACATGCGTAAATTT
>Atu3166(fruK) Score=6 Pos=-98 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATATTGACGCGCGTAAACTT
# TF - SoxR: Atu3915
>Atu2361(PF07690) Score=6 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTCAACTATGGTTGAGGA
>Atu0942(PF07690) Score=5.3 Pos=-78 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTCAATGGCGCTTGAGGT
>Atu4583(sodB) Score=5.8 Pos=-96 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTCAACCGTGATTGAGGT
>Atu3915(soxR) Score=6.1 Pos=-91 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTCAACTATAGTTGAGGA
# TF - CueR: Atu1197, Atu0938
>Atu1195(copA) Score=5.4 Pos=-54 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTTGCCACGATGGGAAGCC
>Atu0937(copA) Score=5.6 Pos=-110 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACCTTCCCATCATGGGAAGCC
# TF - CadR-PbrR: Atu0888
>Atu0889 Score=5.2 Pos=-20 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATCTCCAGTCTCTAGAGATA
>Atu0843(cadA) Score=5.8 Pos=-59 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAGCTCTAGTTGCTAGAGGTG
# TF - SMb21598: Atu4364
>Atu4363(COG0673) Score=6.4 Pos=-62 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTCGTAAACGTTTACGACG
>Atu4364(SMb21598) Score=6.6 Pos=-96 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGTCGTAAACGTTTACGAGA
# TF - SMb21706: Atu5078
>Atu5078(SMb21706) Score=6 Pos=-56 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTGAAAAAACGATTTCTCAC
>Atu5078(SMb21706) Score=6.1 Pos=-78 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAGAGAAAACGTTTTCTCTA
# TF - SMc04260: Atu1522
>Atu3352(SMc04259) Score=5.7 Pos=-32 [Agrobacterium tumefaciens str. C58 (Cereon)]
CTACTGCAACGTTTCAGTGA
>Atu3351(SMc04258) Score=5.6 Pos=-28 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGACTGTAACGTTACAGGAG
>Atu1523(manA) Score=5.5 Pos=-150 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTACGGTAACGTTGCCGGAG
>Atu4485(bgl) Score=5.1 Pos=-105 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATCCTGAAACGTTGTAGATT
# TF - EutR: Atu4760
>Atu4759(eutB) Score=3.9 Pos=-74 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGAATCATTACAAT
>Atu4759(eutB) Score=4.2 Pos=-52 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGACATGATTTTAT
>Atu4760(EutR) Score=3.1 Pos=-19 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCGAAAACGAGACAAT
# TF - AnsR: Atu3794
>Atu3792(ansP) Score=5.2 Pos=-230 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGCTGTCTTACAGAT
>Atu3793(aspA) Score=5.2 Pos=-43 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATCTGTAAGACAGCT
>Atu3793(aspA) Score=4.6 Pos=-145 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGCTGCATGACAGAT
>Atu3792(ansP) Score=4.6 Pos=-128 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATCTGTCATGCAGCT
# TF - Atu2740: Atu2740
>Atu2738(Atu2738) Score=4.9 Pos=-94 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTATCAGACAAC
>Atu2739(Atu2739) Score=4.9 Pos=-112 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGTCTGATAAC
>Atu2741(Atu2741) Score=5.6 Pos=-66 [Agrobacterium tumefaciens str. C58 (Cereon)]
GTTGTCAGACATC
# TF - BioR: Atu0791
>Atu3997(bioB) Score=4.8 Pos=85 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTATCTATAA
>Atu4001(bioZ) Score=4.1 Pos=-105 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTATCGATGA
# TF - SMb20014: Atu4373
>Atu4369(SMc20018) Score=6.2 Pos=-73 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATATGAAACCGGTTACATTT
>Atu4369(SMc20018) Score=6 Pos=-51 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGATGTAAACGGTTTCATCG
# TF - IdnR: Atu4685
>Atu4687(Atu4687) Score=6.4 Pos=-83 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAATGTTATCGAGAACATTT
>Atu4687(Atu4687) Score=5.7 Pos=-245 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAATGATACCGATAACATGC
>Atu4086(idnO) Score=6.4 Pos=-58 [Agrobacterium tumefaciens str. C58 (Cereon)]
GAATGTTATCGGTAACATAT
>Atu4686(SSF54909) Score=5.7 Pos=-70 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCATGTTATCGGTATCATTG
>Atu4686(SSF54909) Score=6.4 Pos=-232 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAATGTTCTCGATAACATTT
>Atu4087(idnD) Score=6.4 Pos=-177 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATATGTTACCGATAACATTC
# TF - XylR: Atu4481
>Atu4481(xylR) Score=6.3 Pos=-72 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATGAGGTACGTACATCATT
>Atu4480(COG3576) Score=6.5 Pos=-104 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTGAGGTACGTACCTCAAT
>Atu3200 Score=6.2 Pos=-129 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTGCTTTACGTACCTCAAA
# TF - Atu3908: Atu3908
>Atu3909(COG1914) Score=4.6 Pos=-97 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATTGTTGAACAATA
>Atu3908(Atu3908) Score=4.6 Pos=-184 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATTGTTCAACAATA
# TF - Atu5239: Atu5239
>Atu5233(dsd) Score=6.3 Pos=-64 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAATGACAACGTTACCATCA
>Atu5232(COG0251) Score=6.3 Pos=-88 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGATGGTAACGTTGTCATTA
>Atu5233(dsd) Score=6.1 Pos=-27 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAATGACAACGATACCATCG
>Atu5232(COG0251) Score=6.1 Pos=-125 [Agrobacterium tumefaciens str. C58 (Cereon)]
CGATGGTATCGTTGTCATTG
# TF - SMb20039: Atu0235
>Atu0234(COG697) Score=13.3 Pos=-106 [Agrobacterium tumefaciens str. C58 (Cereon)]
AACCGTACTGC-(8)-CCATAACAGTT-(6)-TATTGTATCGT
# TF - PdxQ2: Atu4266
>Atu4267(COG0346) Score=9.6 Pos=-120 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAAAGTGTCACGTTACACTATT
>Atu4266(pdxQ2) Score=9.6 Pos=-37 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATAGTGTAACGTGACACTTTT
# TF - Mll0059: Atu1848
>Atu1847(PF06568) Score=9.2 Pos=-102 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTGTCA---TGACAATT
>Atu1848(Mll0059) Score=9.2 Pos=-10 [Agrobacterium tumefaciens str. C58 (Cereon)]
AATTGTCA---TGACAAAT
# TF - UxuR2: Atu3252, Atu2821
>Atu2819(rbsA) Score=5.2 Pos=-138 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAATTGGCTTGACCATTAT
>Atu2821(uxuR2-2) Score=4.5 Pos=1 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGAATGGTCAGGCCAAAAT
>Atu2819(rbsA) Score=4.5 Pos=-322 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTTGGCCTGACCATTCA
>Atu2821(uxuR2-2) Score=5.2 Pos=-183 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATAATGGTCAAGCCAATTA
>Atu2821(uxuR2-2) Score=4.8 Pos=-205 [Agrobacterium tumefaciens str. C58 (Cereon)]
CAAATGGTTAGGCCGGTTT
>Atu3252(uxuR2) Score=5.3 Pos=-64 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAATTGGTAAGACCATCTT
>Atu2819(rbsA) Score=4.8 Pos=-116 [Agrobacterium tumefaciens str. C58 (Cereon)]
AAACCGGCCTAACCATTTG
# TF - FnrN/FixK/AadR: Atu1602
>Atu2394(sinR) Score=5.2 Pos=-174 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGTTTGATCGAAATCAATTC
>Atu4382(nirK) Score=4.3 Pos=-96 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTTGTTCCATCTCAAATT
>Atu4380(nnrR) Score=4.3 Pos=-129 [Agrobacterium tumefaciens str. C58 (Cereon)]
TAGTTGATTCATATCATTTG
>Atu8040(Atu8040) Score=4.3 Pos=-68 [Agrobacterium tumefaciens str. C58 (Cereon)]
TCTTTGCGGTCGGTCAAAGA
>Atu2283(paz) Score=4 Pos=-93 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATTTGATTTTTCGCAAAGA
>Atu0767(ctaC) Score=4.2 Pos=-178 [Agrobacterium tumefaciens str. C58 (Cereon)]
GGATTGATCAATGGCAAAAT
>Atu1537(ccoN) Score=5.5 Pos=-131 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTCTTGATCTGGATCAAGGT
>Atu1530(ccoG) Score=5.2 Pos=-72 [Agrobacterium tumefaciens str. C58 (Cereon)]
CACTTGATGTAAGTCAAGGA
>Atu0767(ctaC) Score=5.1 Pos=-71 [Agrobacterium tumefaciens str. C58 (Cereon)]
TGATTGATCTAGATCAGACG
>Atu0769(ctaB) Score=3.8 Pos=-209 [Agrobacterium tumefaciens str. C58 (Cereon)]
GCCTTTATGAAAAGCAAGCG
>Atu1268(nuoA) Score=4.1 Pos=-164 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATATTGTTGCCAATCAATGC
>Atu3191(ompW) Score=4.9 Pos=-140 [Agrobacterium tumefaciens str. C58 (Cereon)]
CATTTGATCCATCTCAATCG
>Atu0626(adhA) Score=4.1 Pos=-93 [Agrobacterium tumefaciens str. C58 (Cereon)]
GATTTGCGATGGGTCAATTC
>Atu2613(hemA) Score=5 Pos=-166 [Agrobacterium tumefaciens str. C58 (Cereon)]
TTTTTGATGTGAATCAATTT
>Atu4088(cydR) Score=4.7 Pos=-92 [Agrobacterium tumefaciens str. C58 (Cereon)]
ATTTTGACGCAGGTCAAAAA
>Atu0973(ccmI) Score=5.2 Pos=-148 [Agrobacterium tumefaciens str. C58 (Cereon)]
AGTTTGACGTAAATCAAGGT
>Atu1602(fnrN) Score=4 Pos=-208 [Agrobacterium tumefaciens str. C58 (Cereon)]
TATTTGCCTTTTATCAAGAA
>Atu1602(fnrN) Score=4.9 Pos=-144 [Agrobacterium tumefaciens str. C58 (Cereon)]
ACTTTGACTTCAATCAAATT