# TF - ZntR: Shew_3411
>Shew_3411(zntR) Score=6.9 Pos=-66 [Shewanella loihica PV-4]
ACCTTAGATTTAACTCTAAGGT
# TF - TyrR: Shew_1437
>Shew_1952(aroA) Score=4 Pos=-268 [Shewanella loihica PV-4]
TTGGCAAATTTTCATGCCAG
>Shew_0769(brnQ) Score=4.6 Pos=-102 [Shewanella loihica PV-4]
GTGTAATAAGAAGTTTACAC
>Shew_2851(SO1117) Score=4.6 Pos=-320 [Shewanella loihica PV-4]
GTGTCATACTAAGTTGCCAC
>Shew_1438(hmgC) Score=4.5 Pos=-169 [Shewanella loihica PV-4]
CTGTCATGAATTGTTTACAA
>Shew_1437(tyrR) Score=4.7 Pos=-162 [Shewanella loihica PV-4]
GTGTAAACAACTCTTGCCAC
>Shew_2852(pepD) Score=4.6 Pos=-123 [Shewanella loihica PV-4]
GTGGCAACTTAGTATGACAC
>Shew_3635(ipdC) Score=4.1 Pos=-134 [Shewanella loihica PV-4]
CTGTAACGATATCTTGTCAC
>Shew_3626(Sfri_3409) Score=4.1 Pos=-45 [Shewanella loihica PV-4]
ATGTAAAGGGTGTTTGACAT
>Shew_3626(Sfri_3409) Score=4.4 Pos=-90 [Shewanella loihica PV-4]
ATGTAAAGCATGCTTGACCT
>Shew_2973(pep3) Score=4.1 Pos=-180 [Shewanella loihica PV-4]
GAGGAAATCTTTACTTACAT
>Shew_1925(bkdA1) Score=4.7 Pos=-175 [Shewanella loihica PV-4]
TTGTAAAGCTAGCGATACAT
>Shew_1667(ivdA) Score=4.4 Pos=-168 [Shewanella loihica PV-4]
CTGTAAATTCAGCCTGACAA
>Shew_1275(aceB) Score=3.4 Pos=-393 [Shewanella loihica PV-4]
CTGTATCGACAAAATTACTA
>Shew_1555(ldh) Score=5.1 Pos=-157 [Shewanella loihica PV-4]
GTGGAAAGCAAAATTGCCAC
>Shew_1435(phhA) Score=4.7 Pos=-87 [Shewanella loihica PV-4]
ATGTAAATTTGAGGTTACAT
>Shew_1951(tyrB) Score=4 Pos=-141 [Shewanella loihica PV-4]
CTGGCATGAAAATTTGCCAA
# TF - TrpR: Shew_1076
>Shew_1067(aroF) Score=6.6 Pos=-65 [Shewanella loihica PV-4]
TGTAATGGTGTACCATTACG
# TF - SoxR: Shew_0423
>Shew_0422(PF11158) Score=5.7 Pos=-65 [Shewanella loihica PV-4]
ACCTCAAGTCGACTTGAAGT
>Shew_0423(soxR) Score=5.7 Pos=-32 [Shewanella loihica PV-4]
ACTTCAAGTCGACTTGAGGT
# TF - SO4705: Shew_2560
>Shew_2559(SO4706) Score=6.6 Pos=-144 [Shewanella loihica PV-4]
TTGTAATGAAAAAGCCGCTAGACTACAA
>Shew_2560(SO4705) Score=6.6 Pos=-65 [Shewanella loihica PV-4]
TTGTAGTCTAGCGGCTTTTTCATTACAA
# TF - SO3393: Shew_3099
>Shew_3099(SO3393) Score=5.8 Pos=-67 [Shewanella loihica PV-4]
TTTTGAACGTTCATTCAAAA
>Shew_3099(SO3393) Score=6.7 Pos=-118 [Shewanella loihica PV-4]
TCTTGAATGAGCGTTCAAGA
>Shew_3098(SO3392) Score=6.7 Pos=-33 [Shewanella loihica PV-4]
TCTTGAACGCTCATTCAAGA
>Shew_3098(SO3392) Score=5.8 Pos=-84 [Shewanella loihica PV-4]
TTTTGAATGAACGTTCAAAA
# TF - SO3277: Shew_1313
>Shew_1312(SO3278) Score=5.6 Pos=-64 [Shewanella loihica PV-4]
ATTAGACTAACAAGTCTAGT
>Shew_1312(SO3278) Score=6.5 Pos=-92 [Shewanella loihica PV-4]
ACTAGACTAGACAGTCCAGT
>Shew_1313(SO3277) Score=6.5 Pos=-70 [Shewanella loihica PV-4]
ACTGGACTGTCTAGTCTAGT
>Shew_1313(SO3277) Score=5.6 Pos=-98 [Shewanella loihica PV-4]
ACTAGACTTGTTAGTCTAAT
# TF - SO1758: Shew_2541
>Shew_2543(SO1756) Score=6.5 Pos=-105 [Shewanella loihica PV-4]
ACTGACACTAGGCTGTCAGT
# TF - SO1703
>Shew_3567(SO1703) Score=6.3 Pos=-23 [Shewanella loihica PV-4]
AATTCCTCTACTGAGGAATT
# TF - SO1578: Shew_2729
>Shew_2729(SO1578) Score=6.1 Pos=-66 [Shewanella loihica PV-4]
ATAACTGAACGTTCGGTCAA
>Shew_2729(SO1578) Score=5.6 Pos=-101 [Shewanella loihica PV-4]
TTAACTGAACGCTCGTTTAG
>Shew_2730(SO1577) Score=5.6 Pos=-79 [Shewanella loihica PV-4]
CTAAACGAGCGTTCAGTTAA
>Shew_2730(SO1577) Score=6.1 Pos=-114 [Shewanella loihica PV-4]
TTGACCGAACGTTCAGTTAT
# TF - SO1415: Shew_0277
>Shew_0272(SO1410) Score=6.3 Pos=-151 [Shewanella loihica PV-4]
ATTCGCGAGCCAAGTCACGAAT
>Shew_0277(SO1415) Score=6.3 Pos=-235 [Shewanella loihica PV-4]
ATTCGTGAACCATGTCCCGAAT
>Shew_0276(SO1414) Score=6.3 Pos=-118 [Shewanella loihica PV-4]
ATTCGGGACATGGTTCACGAAT
# TF - SO1393: Shew_1679
>Shew_1680(SO1392) Score=6.5 Pos=-97 [Shewanella loihica PV-4]
GGTAGACCAAGTTGTCTACT
>Shew_1680(SO1392) Score=5.7 Pos=-71 [Shewanella loihica PV-4]
GGTAGACAGACTTGTCTACA
>Shew_1679(SO1393) Score=6.5 Pos=-51 [Shewanella loihica PV-4]
AGTAGACAACTTGGTCTACC
>Shew_1679(SO1393) Score=5.7 Pos=-77 [Shewanella loihica PV-4]
TGTAGACAAGTCTGTCTACC
# TF - SO0193: Shew_0132
>Shew_0132(SO0193) Score=6.3 Pos=-70 [Shewanella loihica PV-4]
ATTGTGAACATTGTTTTTTAT
# TF - SO0072: Shew_3779
>Shew_3779(SO0072) Score=7.1 Pos=-34 [Shewanella loihica PV-4]
TGTATCAATGTATTAATACA
>Shew_3780(PF00561) Score=7.1 Pos=-101 [Shewanella loihica PV-4]
TGTATTAATACATTGATACA
# TF - SdaR: Shew_2528
>Shew_2533(grtP) Score=5.4 Pos=-199 [Shewanella loihica PV-4]
ATTTGGGCAAAAGCACAAAT
# TF - PUR
>Shew_1513(purM) Score=5.4 Pos=-52 [Shewanella loihica PV-4]
TAGAATAGCGCCGCATAAAA
>Shew_3064(gcvT) Score=5.3 Pos=-302 [Shewanella loihica PV-4]
TATAATTTCGCCGCATTTTG
>Shew_1297(guaB) Score=4.5 Pos=-56 [Shewanella loihica PV-4]
TATAATCCCGCCGCAATATT
>Shew_2816(tsx) Score=4.6 Pos=-75 [Shewanella loihica PV-4]
TAAAATGCGGCGCCAACAAA
# TF - PsrA: Shew_2052
>Shew_2426(fadI) Score=5.4 Pos=-166 [Shewanella loihica PV-4]
AACCAAACAGGTGTTTAAAA
>Shew_0019(fadB) Score=6.1 Pos=-161 [Shewanella loihica PV-4]
AATTAAACAAGTGTTTAAAT
>Shew_2052(psrA) Score=6.2 Pos=-39 [Shewanella loihica PV-4]
ATTTAAACACACGTTTAAAT
>Shew_2409(SO2935) Score=4.4 Pos=-74 [Shewanella loihica PV-4]
TTTTAAACATTCGTTTCAGG
>Shew_2409(SO2935) Score=4.4 Pos=-87 [Shewanella loihica PV-4]
AATCAGTCATTTGTTTTAAA
>Shew_3772(SO0080) Score=5.4 Pos=-35 [Shewanella loihica PV-4]
AACTAAACACTTGTTTGAAA
>Shew_0590(SO0881) Score=6 Pos=-116 [Shewanella loihica PV-4]
ATTAAAACATGTGTTTAATT
>Shew_3003(fadE3) Score=4.9 Pos=-199 [Shewanella loihica PV-4]
ATTCAAACAATTATATGAAA
>Shew_3003(fadE3) Score=5.5 Pos=-186 [Shewanella loihica PV-4]
TATGAAACAAGTGTTTAAAT
>Shew_0540(echH) Score=5.8 Pos=-80 [Shewanella loihica PV-4]
AATTAAACGCGTGTTTGAAA
>Shew_0086(etfD) Score=5.7 Pos=-47 [Shewanella loihica PV-4]
AATAAAACACCCGTTTCAAT
>Shew_1651(sdhC) Score=5.8 Pos=-329 [Shewanella loihica PV-4]
ATTTAAATAAGTGTTTAAAT
>Shew_1961(acdH) Score=6.1 Pos=-41 [Shewanella loihica PV-4]
ATTAAAACGACTGTTTTAAT
>Shew_1275(aceB) Score=5.9 Pos=-527 [Shewanella loihica PV-4]
ATTAAAACGCGCGTTTGATT
>Shew_1650(gltA) Score=5.8 Pos=-103 [Shewanella loihica PV-4]
ATTTAAACACTTATTTAAAT
>Shew_2108(fadE2) Score=5.5 Pos=-155 [Shewanella loihica PV-4]
AGTTAAACAATTGTTTGAAA
>Shew_2188(fadD1) Score=5.5 Pos=-130 [Shewanella loihica PV-4]
ATTAAAACGCCCGTATGATT
>Shew_3084(fadD2) Score=5.3 Pos=-130 [Shewanella loihica PV-4]
TGTTAAACGATTGTTTTATT
>Shew_1942(fadH) Score=5 Pos=-31 [Shewanella loihica PV-4]
TTTAAATCACTTGTTTAAAA
>Shew_1942(fadH) Score=5.4 Pos=-18 [Shewanella loihica PV-4]
TTTAAAAAGGATGTTTAAAT
>Shew_3084(fadD2) Score=5.1 Pos=-70 [Shewanella loihica PV-4]
GTCTAAACACCTGTTTGATT
# TF - PrpR: Shew_1819, Shew_0280
>Shew_1819(prpR) Score=5.5 Pos=-292 [Shewanella loihica PV-4]
TTTGTCGACAAT
>Shew_1819(prpR) Score=5.5 Pos=-92 [Shewanella loihica PV-4]
TTTGTCGACAAT
>Shew_1819(prpR) Score=5.4 Pos=-40 [Shewanella loihica PV-4]
ATTGTCGACAAC
>Shew_0280(prpR) Score=4.4 Pos=-150 [Shewanella loihica PV-4]
GTTGTCAACAAA
>Shew_0280(prpR) Score=5.2 Pos=-54 [Shewanella loihica PV-4]
ATTGTTGACAAT
# TF - PflR: Shew_2387
>Shew_2388(focA) Score=5.4 Pos=-210 [Shewanella loihica PV-4]
TATCAATTTTACTGATT
>Shew_2387(pflR) Score=5.8 Pos=-59 [Shewanella loihica PV-4]
CATCAATTTTATTGATA
>Shew_2390(pflB) Score=4.5 Pos=-504 [Shewanella loihica PV-4]
CATCAAACTTGCTGATA
>Shew_2389(pflX) Score=5.4 Pos=-265 [Shewanella loihica PV-4]
TTTCAAGTTTATTGATA
# TF - PdhR: Shew_3432
>Shew_1219(oadG) Score=6 Pos=-202 [Shewanella loihica PV-4]
ATTTGGTAAGACCAATT
>Shew_3135(lldP) Score=5.7 Pos=-478 [Shewanella loihica PV-4]
AATTGGTAATACCTATT
>Shew_3135(lldP) Score=4.9 Pos=-218 [Shewanella loihica PV-4]
AACTGGTCAGACAAAGT
>Shew_3432(pdhR) Score=6.4 Pos=-39 [Shewanella loihica PV-4]
AATTGGTAAGACCAATT
>Shew_2390(pflB) Score=6.4 Pos=-242 [Shewanella loihica PV-4]
AATTGGTCTTACCAATT
>Shew_2389(pflX) Score=6.4 Pos=-205 [Shewanella loihica PV-4]
AATTGGTCAGACCAATT
>Shew_1275(aceB) Score=5.6 Pos=-233 [Shewanella loihica PV-4]
GTTTGGTCTTACCAATT
# TF - NtrC: Shew_3561
>Shew_0846(glnB) Score=4.5 Pos=-172 [Shewanella loihica PV-4]
TGCGCTATTTTTGTGCG
>Shew_0846(glnB) Score=5.8 Pos=-142 [Shewanella loihica PV-4]
CGCACCTAATTGGTGCA
>Shew_3554(glnA) Score=5.9 Pos=-178 [Shewanella loihica PV-4]
TGCACCTTTATGGTGCA
>Shew_3554(glnA) Score=5.4 Pos=-217 [Shewanella loihica PV-4]
CGCACCATATTGGTGAA
>Shew_3560(ntrB) Score=6.3 Pos=-52 [Shewanella loihica PV-4]
TGCACCAAATTGGTGCA
>Shew_3560(ntrB) Score=6.2 Pos=-39 [Shewanella loihica PV-4]
TGCACCATTATGGTGCA
# TF - NsrR: Shew_3810
>Shew_1069(hcp) Score=5.1 Pos=-41 [Shewanella loihica PV-4]
ACGTGCAAATAAAAAGCATGA
>Shew_2322(nnrS) Score=5.2 Pos=-64 [Shewanella loihica PV-4]
ACATGCATATAAATTACACCT
# TF - NrdR: Shew_1186
>Shew_1946(nrdA) Score=5 Pos=-149 [Shewanella loihica PV-4]
ACACCATATCTTGTGT
>Shew_1946(nrdA) Score=3.7 Pos=-180 [Shewanella loihica PV-4]
CCTCACTATCTTGTAT
>Shew_2449(nrdD) Score=5.2 Pos=-49 [Shewanella loihica PV-4]
ACACTATATATGGTGT
>Shew_2449(nrdD) Score=4.3 Pos=-80 [Shewanella loihica PV-4]
GCGCTACATATTGTGT
# TF - NorR: Shew_0656
>Shew_0656(norR) Score=5.3 Pos=-120 [Shewanella loihica PV-4]
AAGTGTAAAAATGACAATA
>Shew_0656(norR) Score=4.4 Pos=-96 [Shewanella loihica PV-4]
TACTGTTAAATTGACATAT
>Shew_0657(norB) Score=5.9 Pos=-132 [Shewanella loihica PV-4]
GATTGTCATTATGACAATT
>Shew_0657(norB) Score=4.6 Pos=-157 [Shewanella loihica PV-4]
CGGTGTCATTTTTACACTT
>Shew_0657(norB) Score=4.5 Pos=-175 [Shewanella loihica PV-4]
CACTGTCTTTTTGACACGC
>Shew_0657(norB) Score=4.2 Pos=-204 [Shewanella loihica PV-4]
AAGTATCAAATCGACACAG
# TF - NhaR: Shew_1044
>Shew_1042(nhaA) Score=5.6 Pos=-97 [Shewanella loihica PV-4]
CCTCGGAATTACCGATG
# TF - NagR: Shew_1111
>Shew_0815(nagB) Score=6.4 Pos=-119 [Shewanella loihica PV-4]
AATGACAACGCTGTCATT
>Shew_1119(nagP) Score=6.1 Pos=-186 [Shewanella loihica PV-4]
AATGACAGCGTTGTCTTT
>Shew_1116(nagK) Score=6.4 Pos=-106 [Shewanella loihica PV-4]
AATGACAGCGTTGTCATT
>Shew_1114(sapC) Score=5.7 Pos=-374 [Shewanella loihica PV-4]
TATGACAACGCTGTCAAC
>Shew_1112(omp_nag) Score=6.2 Pos=-76 [Shewanella loihica PV-4]
CATGACAGCGTTGTCATT
# TF - MalR: Shew_1870
>Shew_1889(malZ) Score=6.1 Pos=-311 [Shewanella loihica PV-4]
TATGCATACGTATTCAAA
>Shew_1889(malZ) Score=6.2 Pos=-160 [Shewanella loihica PV-4]
TTTGCATACGTATGCAGT
>Shew_1876(susB) Score=5.9 Pos=-164 [Shewanella loihica PV-4]
GGTGAATACGTATGCAGC
>Shew_1874(malT) Score=5.6 Pos=-316 [Shewanella loihica PV-4]
GATGAATACGTATGTAAT
>Shew_1888(omp(Mal)) Score=6.1 Pos=-192 [Shewanella loihica PV-4]
TTTGAATACGTATGCATA
>Shew_1888(omp(Mal)) Score=6.2 Pos=-343 [Shewanella loihica PV-4]
ACTGCATACGTATGCAAA
# TF - LldR: Shew_3007
>Shew_3004(lldE) Score=6.1 Pos=-154 [Shewanella loihica PV-4]
TAAATTAGCACTACTTATTAT
# TF - LiuR: Shew_2569
>Shew_1555(ldh) Score=6.5 Pos=-174 [Shewanella loihica PV-4]
CTTTACGTTAACGTAAAG
>Shew_1032(gltB) Score=5.8 Pos=-178 [Shewanella loihica PV-4]
GTTGACGTTAACGTAAGG
>Shew_1925(bkdA1) Score=5.7 Pos=-105 [Shewanella loihica PV-4]
GTTTACGTTAACGTAACT
>Shew_2584(etfB) Score=5.9 Pos=-100 [Shewanella loihica PV-4]
GTTGACGTTAACGTCAAC
>Shew_1667(ivdA) Score=5.9 Pos=-105 [Shewanella loihica PV-4]
CTTTACGTTCGCGTAAAC
>Shew_2569(liuR) Score=6 Pos=-63 [Shewanella loihica PV-4]
CTTTACCTTTACGTAAAC
>Shew_1275(aceB) Score=5.7 Pos=-544 [Shewanella loihica PV-4]
GTTTACGTAAACGTCAAA
# TF - IscR: Shew_2318
>Shew_2318(iscR) Score=6.4 Pos=-65 [Shewanella loihica PV-4]
ATACTTGACTAAAACAGTCAAGTAT
>Shew_2318(iscR) Score=5.1 Pos=-90 [Shewanella loihica PV-4]
ATACCTGACTAATCTGCTAGGTTTT
>Shew_0106(nfuA) Score=4.5 Pos=-46 [Shewanella loihica PV-4]
AATTCTTACTAAATCACTCGGGTTT
>Shew_0259(ygbA) Score=4.8 Pos=-28 [Shewanella loihica PV-4]
ATAACCCAGTAAAGAAGTCAGATAT
>Shew_0328(dnrN) Score=5.1 Pos=-99 [Shewanella loihica PV-4]
AATCCCGAGTAAAACACTCAAGTTT
>Shew_1017(erpA) Score=5.8 Pos=-64 [Shewanella loihica PV-4]
TTACTTGAACAAAATAGTCAGGTAT
# TF - IlvY: Shew_0287
>Shew_0288(ilvC) Score=4.9 Pos=-108 [Shewanella loihica PV-4]
ATATCATTTTAAGCAAT
>Shew_0288(ilvC) Score=5.3 Pos=-139 [Shewanella loihica PV-4]
ATTGCAAAAAATGCAAT
>Shew_0287(ilvY) Score=4.9 Pos=-101 [Shewanella loihica PV-4]
ATTGCTTAAAATGATAT
>Shew_0287(ilvY) Score=5.3 Pos=-70 [Shewanella loihica PV-4]
ATTGCATTTTTTGCAAT
# TF - HypR: Shew_2365
>Shew_0955(prdP) Score=4.7 Pos=-93 [Shewanella loihica PV-4]
TTTGTATACATT
>Shew_2104(pdtP) Score=4.6 Pos=-26 [Shewanella loihica PV-4]
AATGCATACAAT
>Shew_2743(colA1) Score=5 Pos=-51 [Shewanella loihica PV-4]
ATTTTATACAAA
>Shew_3732(colA2) Score=4.9 Pos=-28 [Shewanella loihica PV-4]
ATTGTATGCAAA
>Shew_2955(COG2423) Score=4.7 Pos=-36 [Shewanella loihica PV-4]
TTTGCATACAAT
>Shew_1685(colA3) Score=4.9 Pos=-159 [Shewanella loihica PV-4]
ATTGTATAAAAT
>Shew_2358(ampP) Score=3.9 Pos=-65 [Shewanella loihica PV-4]
AATGAATAAAAT
>Shew_2361(hypE2) Score=4.9 Pos=-32 [Shewanella loihica PV-4]
ATTGCATACAAA
>Shew_2361(hypE2) Score=5.3 Pos=-118 [Shewanella loihica PV-4]
ATTGTATACAAT
>Shew_2362(hypD) Score=5.3 Pos=-97 [Shewanella loihica PV-4]
ATTGTATACAAT
>Shew_2362(hypD) Score=4.9 Pos=-183 [Shewanella loihica PV-4]
TTTGTATGCAAT
>Shew_0615(putA) Score=5.4 Pos=-92 [Shewanella loihica PV-4]
ATTGTATACAAA
# TF - HutC: Shew_3758
>Shew_3759(hutI) Score=6.5 Pos=-85 [Shewanella loihica PV-4]
TAGCTTGTATATACAAGTAA
>Shew_3759(hutI) Score=4.5 Pos=-75 [Shewanella loihica PV-4]
ATACAAGTAAATACAAGCTA
>Shew_3758(hutC) Score=5.6 Pos=-128 [Shewanella loihica PV-4]
TAGCTTGTATTTACTTGTAT
>Shew_3758(hutC) Score=6.1 Pos=-118 [Shewanella loihica PV-4]
TTACTTGTATATACAAGCTA
# TF - HmgQ: Shew_2153
>Shew_2154(hmgA) Score=5.8 Pos=-123 [Shewanella loihica PV-4]
ATCTAAAATTTAGAT
>Shew_2153(hmgQ) Score=5.8 Pos=-46 [Shewanella loihica PV-4]
ATCTAAATTTTAGAT
# TF - HexR: Shew_2049
>Shew_2850(SO1118) Score=5.2 Pos=-240 [Shewanella loihica PV-4]
ATGTAGTAAAATTACAG
>Shew_2850(SO1118) Score=5.4 Pos=-188 [Shewanella loihica PV-4]
TTGTAATAAAACTACAT
>Shew_1610(cdd) Score=4.3 Pos=-57 [Shewanella loihica PV-4]
TGGTAACTTAGTTACTA
>Shew_2814(deoA) Score=4.6 Pos=-85 [Shewanella loihica PV-4]
TCGTAATTAAATTACGG
>Shew_1910(adhE) Score=4.1 Pos=-72 [Shewanella loihica PV-4]
GTGTAATTTTCCTTCAT
>Shew_1089(tal) Score=4.6 Pos=-105 [Shewanella loihica PV-4]
CTGTAATTTTTTTTCAT
>Shew_1910(adhE) Score=5.1 Pos=-136 [Shewanella loihica PV-4]
ATGTTATTTTATTACAT
>Shew_2561(gnd) Score=4.6 Pos=-172 [Shewanella loihica PV-4]
TAGTAATTAACTTACCA
>Shew_3064(gcvT) Score=4.9 Pos=-395 [Shewanella loihica PV-4]
ATGTAAAAAAACTACAT
>Shew_2817(nupC) Score=4.6 Pos=-125 [Shewanella loihica PV-4]
TTGAAATAAAACTTCAA
>Shew_2048(zwf) Score=4.8 Pos=-174 [Shewanella loihica PV-4]
TAGTAATTTAATCACAA
>Shew_2048(zwf) Score=5 Pos=-76 [Shewanella loihica PV-4]
CTGTTGTTATATTACAA
>Shew_2709(nqrA) Score=4.6 Pos=-99 [Shewanella loihica PV-4]
CTGTAGCTAAGTTACAA
>Shew_2709(nqrA) Score=5 Pos=-171 [Shewanella loihica PV-4]
TTGTTATAAAACTACAT
>Shew_1166(adhB) Score=4.8 Pos=-168 [Shewanella loihica PV-4]
TTGTCATAAATTTACAA
>Shew_2002(gapA2) Score=4.3 Pos=-175 [Shewanella loihica PV-4]
TAGTATTTTTTTTACAG
>Shew_2000(gapB) Score=4.9 Pos=-181 [Shewanella loihica PV-4]
ATCTAATAAAATTACAC
>Shew_1549(ppsA) Score=5.5 Pos=-114 [Shewanella loihica PV-4]
TAGTAATAAAATTACAA
>Shew_1091(phk) Score=5.8 Pos=-75 [Shewanella loihica PV-4]
TTGTAATAAAATTACAA
>Shew_2049(hexR) Score=4.8 Pos=-151 [Shewanella loihica PV-4]
TTGTGATTAAATTACTA
>Shew_2049(hexR) Score=5 Pos=-249 [Shewanella loihica PV-4]
TTGTAATATAACAACAG
>Shew_2050(pykA) Score=5.1 Pos=-75 [Shewanella loihica PV-4]
TTGTAATTTTCCTACAA
>Shew_2002(gapA2) Score=4.6 Pos=-50 [Shewanella loihica PV-4]
TGGTAATTTTACTACCA
# TF - GlmR: Shew_3840
>Shew_3840(glmR) Score=6.4 Pos=-33 [Shewanella loihica PV-4]
ATCTTTCGAAACGAAACTT
# TF - GcvA: Shew_2764
>Shew_2764(gcvA) Score=5.6 Pos=-38 [Shewanella loihica PV-4]
ATTAGAAAAACTAAT
>Shew_1154(SO3342) Score=5.1 Pos=-97 [Shewanella loihica PV-4]
ATTAAAAAATCTAAT
>Shew_1522(SO2753) Score=5.6 Pos=-336 [Shewanella loihica PV-4]
ATTAGtaTtTCTAAT
>Shew_1625(sdaA) Score=4.1 Pos=-184 [Shewanella loihica PV-4]
TTGAAAAAAACTAAT
>Shew_3064(gcvT) Score=4.8 Pos=-371 [Shewanella loihica PV-4]
ATGAGAAAAAGTAAT
# TF - FadR: Shew_2174
>Shew_2436(fadL) Score=4.6 Pos=-133 [Shewanella loihica PV-4]
ATCTGGTCGGAGTTGTT
>Shew_2426(fadI) Score=4.9 Pos=-112 [Shewanella loihica PV-4]
TGATGGTCTGACCTGTT
>Shew_3680(SO4716) Score=5.4 Pos=-91 [Shewanella loihica PV-4]
AACTGGCCTGACCAGTT
>Shew_2174(fadR) Score=3.8 Pos=-54 [Shewanella loihica PV-4]
CTCTGGTATGATCAGTT
>Shew_2108(fadE) Score=4.7 Pos=-93 [Shewanella loihica PV-4]
CACAGGTCTGACCAGCA
>Shew_0454(SO0572) Score=4.5 Pos=-52 [Shewanella loihica PV-4]
TTCTGGACTGACCAGTA
# TF - FabR: Shew_0137
>Shew_2098(hylII) Score=6.1 Pos=-90 [Shewanella loihica PV-4]
GGCGTACACATGTACGCT
>Shew_0136(OLE1) Score=6 Pos=-43 [Shewanella loihica PV-4]
GGCTTACAGCTGTACGCT
>Shew_3776(lcfE) Score=4.7 Pos=-35 [Shewanella loihica PV-4]
CAGGTACAAGTGTACGCT
>Shew_2664(pfaR) Score=5.9 Pos=-194 [Shewanella loihica PV-4]
AGCGAACATATGTAAGCT
>Shew_2436(fadL) Score=6.4 Pos=-333 [Shewanella loihica PV-4]
AGCGTACAAGTGTACGCT
>Shew_3003(fadE3) Score=5.7 Pos=-156 [Shewanella loihica PV-4]
AGCGTACACTTGTAACCT
>Shew_0137(fabR) Score=6 Pos=-114 [Shewanella loihica PV-4]
AGCGTACAGCTGTAAGCC
>Shew_1817(fabA) Score=6 Pos=-55 [Shewanella loihica PV-4]
GGCGTACACGTGTTAGCT
# TF - Dnr: Shew_3331
>Shew_3399(nosR) Score=5.1 Pos=-100 [Shewanella loihica PV-4]
ATTTGATCTCAGTCACGT
>Shew_3335(nirK) Score=5.8 Pos=-131 [Shewanella loihica PV-4]
ACTTGACCAAAGTCAATT
# TF - CueR2: Shew_3819
>Shew_3819(cueR2) Score=6.8 Pos=-66 [Shewanella loihica PV-4]
ACCTGTGTCTAACACACAGGT
# TF - CalR: Shew_3104
>Shew_3103(calB) Score=7.1 Pos=-127 [Shewanella loihica PV-4]
GACCGACTAATCAGTCGGTT
# TF - BirA: Shew_0142
>Shew_1718(bioA) Score=8 Pos=-60 [Shewanella loihica PV-4]
CTGTCAACG---------------GGTTTACTA
>Shew_1719(bioB) Score=8 Pos=-122 [Shewanella loihica PV-4]
TAGTAAACC---------------CGTTGACAG
# TF - AzrR: Shew_0915
>Shew_0915(azrR) Score=6.6 Pos=-97 [Shewanella loihica PV-4]
CTTTATTTAATTTTGTAAAG
>Shew_0914(azr) Score=6.6 Pos=-63 [Shewanella loihica PV-4]
CTTTACAAAATTAAATAAAG
# TF - ArgR: Shew_0866
>Shew_0578(astC) Score=5 Pos=-304 [Shewanella loihica PV-4]
TGTGACTATATATTCATA
>Shew_0201(argE) Score=4.2 Pos=-53 [Shewanella loihica PV-4]
TATGCAATAATATTGAAT
>Shew_0289(ilvG) Score=4.5 Pos=-166 [Shewanella loihica PV-4]
AGTGATTATTAAATCACA
>Shew_0845(SO0762) Score=5 Pos=-139 [Shewanella loihica PV-4]
GCTGCATATAAATGCACC
>Shew_0973(potF) Score=4.2 Pos=-179 [Shewanella loihica PV-4]
ATTAGATATAAATTCATA
>Shew_2443(aprE) Score=4.2 Pos=-229 [Shewanella loihica PV-4]
TTCGAATAAATACTCAAA
>Shew_1196(recN) Score=5.1 Pos=-61 [Shewanella loihica PV-4]
ACTGTATAAAAATTCAGT
>Shew_3098(SO3392) Score=4.2 Pos=-83 [Shewanella loihica PV-4]
TTTGAATGAACGTTCAAA
>Shew_0578(astC) Score=4 Pos=-244 [Shewanella loihica PV-4]
TCTGACTATTTATGCTCA
>Shew_1032(gltB) Score=4.3 Pos=-303 [Shewanella loihica PV-4]
TATGCAATAAAAATCACT
>Shew_2790(argW) Score=4.5 Pos=-90 [Shewanella loihica PV-4]
CATGAATGGATATTCAGA
>Shew_1032(gltB) Score=3.8 Pos=-324 [Shewanella loihica PV-4]
TTTGTTAAATAATTCACT
>Shew_0203(argB) Score=4.9 Pos=-57 [Shewanella loihica PV-4]
AATGCATAAAGATTCATT
>Shew_3166(artI) Score=3.7 Pos=-82 [Shewanella loihica PV-4]
ATCGCATAAGTATTGACT
>Shew_3166(artI) Score=4.6 Pos=-103 [Shewanella loihica PV-4]
AATGACTAAATAGTCATT
>Shew_2443(aprE) Score=4.5 Pos=-166 [Shewanella loihica PV-4]
TCTGCATAAAAATGCTCT
>Shew_0866(argR) Score=5.1 Pos=-95 [Shewanella loihica PV-4]
CCTGAATTTTTATTCACA
>Shew_3478(argA) Score=5.5 Pos=-80 [Shewanella loihica PV-4]
TGTGAATTTAAATGCAAT
>Shew_2074(omp(Arg)) Score=4.7 Pos=-609 [Shewanella loihica PV-4]
AGTGCATTTAAATTGAAG
>Shew_0202(argC) Score=3.7 Pos=-249 [Shewanella loihica PV-4]
TAAAAATATCTATTCAAT
>Shew_0202(argC) Score=3.5 Pos=-228 [Shewanella loihica PV-4]
ATTGCATAATTAGTTTGT
>Shew_1219(oadG) Score=4 Pos=-331 [Shewanella loihica PV-4]
ATTCAATTTTCAAGCAGA
>Shew_1219(oadG) Score=4.3 Pos=-377 [Shewanella loihica PV-4]
ATTGCATAATCTTGCATA
# TF - MetR: Shew_2987
>Shew_2987(metR) Score=4.6 Pos=-26 [Shewanella loihica PV-4]
ATGAGCCAAATTCAT
>Shew_2986(metE) Score=4.4 Pos=-167 [Shewanella loihica PV-4]
GTGAAATCAATTCGA
>Shew_2986(metE) Score=4.6 Pos=-189 [Shewanella loihica PV-4]
ATGAATTTGGCTCAT
>Shew_2987(metR) Score=4.4 Pos=-48 [Shewanella loihica PV-4]
TCGAATTGATTTCAC
>Shew_2987(metR) Score=4.6 Pos=-178 [Shewanella loihica PV-4]
ATGAGAGAAATTCAT
>Shew_2882(luxS) Score=4.5 Pos=-153 [Shewanella loihica PV-4]
TTGAGCTAAGTTCAC
>Shew_1776(ilvI) Score=4.2 Pos=-221 [Shewanella loihica PV-4]
GTGAGTTTTGCTCAA
>Shew_1185(glyA) Score=4 Pos=-122 [Shewanella loihica PV-4]
ATGAACATTTCTCAG
# TF - LexA: Shew_0127
>Shew_1196(recN) Score=5.7 Pos=-62 [Shewanella loihica PV-4]
TACTGTATAAAAATTCAGTA
>Shew_1196(recN) Score=4.9 Pos=-40 [Shewanella loihica PV-4]
TACTGTGCATGAATACAGTA
>Shew_2299(topB) Score=5.9 Pos=-32 [Shewanella loihica PV-4]
TACTGTTAATTTATACAGTA
>Shew_1799(yebG) Score=5.7 Pos=-31 [Shewanella loihica PV-4]
AACTGTATATAAAAACAGTG
>Shew_1215(recA) Score=5.6 Pos=-127 [Shewanella loihica PV-4]
TACTGTATGATTGTACAGTA
>Shew_0127(lexA) Score=4.9 Pos=-45 [Shewanella loihica PV-4]
TACTGTATATACTGACAGGT
>Shew_0127(lexA) Score=4.8 Pos=-26 [Shewanella loihica PV-4]
TACTGTATGGAAAGACAGGA
>Shew_2871(dinB) Score=5.9 Pos=-43 [Shewanella loihica PV-4]
TACTGTTTAAATGTACAGTA
>Shew_2483(dinG) Score=5.4 Pos=-43 [Shewanella loihica PV-4]
CACTGTTATTATGTACAGCA
>Shew_3507(recG) Score=5.1 Pos=-71 [Shewanella loihica PV-4]
ATATGTATATATTTACAGTA
>Shew_2102(imuA) Score=6.1 Pos=-145 [Shewanella loihica PV-4]
TACTGTATTTATATACAGTG
>Shew_3147(xerC) Score=5.5 Pos=-299 [Shewanella loihica PV-4]
CGCTGTTTATTTATACAGTG
# RNA - FMN
>Shew_0040(ribB) Score=89.2 Pos=-368 [Shewanella loihica PV-4]
TACATTCTCAGGGCGGGGTGAGACTCCCCACCGGCGGTAATCATCCTATGGGATGTCAGCCCGCGAGCGCCTATTTGCATCTAGGTATTAGTGTGCAGCTAGGGTCAGCAGATCTGGTGAAGTGTGCAACAAGCCATCTATTCCAGAGCCGACGGTAATGAGCACCGAGTGCACTAAGTCCGGATGAAAGAGAATATAAGA
# RNA - TPP
>Shew_2096(thiC) Score=68.1 Pos=-277 [Shewanella loihica PV-4]
GCCCCTCTTGTCGGAGTGCCATTAGGCTGAGACCGTTTATTCGGGATCCGTTGAACCTGATCAGGTTAGTCCCTGCGAAGGAAACAAGCATAATATGACC
>Shew_1735(omp_thi) Score=69.4 Pos=-192 [Shewanella loihica PV-4]
GCCTCGCCAAGGGGTGTTAACGCCAAGCCATAGCTTAGCGATTGACTGAGATGTCCGCGGGACGAACCCTTAGAACCTGATCCGGCTAATACCGGCGTAGGAATGGGCCACATCACTAGATT
# RNA - Cobalamin
>Shew_2990(btuB) Score=72.2 Pos=-316 [Shewanella loihica PV-4]
AATTTAGTCAACCTTATGTGGTGCCCTAGCCAAAATGGCGCAAGGGATAATCGGGAAGCCAGTGAGAATCTGGCACTGCCCCCGCAACGGTGATAGGTGAGAGCTGGGTGCGCCATGCCTTTAACATCATGGCGTTAAAAAAATCTACGCTCGTCGTTTAAACCCTTTGTTTAGACTTAGCCTCAGTCCGGAGACCGGCCCTTAAGGTGATTTTGAGA
>Shew_0712(btuD) Score=52.3 Pos=-281 [Shewanella loihica PV-4]
GCCTGCGCCGGGAGTATGGTGTCGAGATCGCCAAGGCGATAACTCGGACTTAATAGGGAATTGGGGAAGGCCTCGCGCCGCTAGCCCAAACTGTGCCCGCAACTGTGAGTGTGTTGCCTAGTCGAACCCGACCTGGTCGCCACGAGTCAGGATACCTGCCTACTCTCCAACTACTATCTC
# RNA - Lysine
>Shew_2582(lysW) Score=103.3 Pos=-296 [Shewanella loihica PV-4]
CCTGAGACGTAGAGGTGCATTAAATATCAGTAGTATTCGTTAGGGTGATGCCGTTAAGCGAATATGAAAGGATTTGGTGCCGAAGTGGTGGAGTTGATCAAGGCTTGCCGCTGGGGCTGTCATCGAATAGAGGCAGCACTGCCATAGTGCTTCTTATCTGGATTGATAAGTGGAAGGTATACCGAGAATGGGTATCACTATGGAGCGCTACTGATAGG
>Shew_0779(lysC) Score=95.2 Pos=-305 [Shewanella loihica PV-4]
GATACAGAAGAGGAGCGTTAACTAGGTAGTAAGCCCGAGGAGTCCAAACTCCGTTGACGGTTTATGAGGGAGATTAACGCCGAGGTAAAGAGATGTTTGGTTTCATCTATTTATCGGTCGACTGGGCTGAATCCCATCGATTGTCACCTGTTTTTTGGTGGAGAGCTTCTGGTGGCAA
# RNA - Glycine
>Shew_0496(glyP) Score=45.1 Pos=-355 [Shewanella loihica PV-4]
CCTCTGGAGAGACTGAGAGCCCAGGATAACCCCTAGGTATCACGGCGCCGAAGGCGAAAGTGCAGCCCCAATGGCTGCGCGAAACGCTCAGGCAAAAGGACAGAG
>Shew_0496(glyP) Score=41.3 Pos=-480 [Shewanella loihica PV-4]
GATGAAGGTAGCAGGAGAGTGGGGAGTCAACCCCACACCGACGAGGCAAGTTTGTCGCCAGGCGTTATCGGCGAGAAACCACTCTTTCAGGTGCCATATTGTGGCGTGGACTGTTACTGGACG
# RNA - MOCO_RNA_motif
>Shew_0087(moaA) Score=95.4 Pos=-88 [Shewanella loihica PV-4]
AAACGACGGTTCTCCGAGCTTTCTCTCCTACGTCCACAGATAGGGAGATTAAGCCGTGGCAATAGTGCCACCGGGGTGAGGAAAGAAATTGACTCACCTCCCCTTACTTGGAAAGGTGATCATGTCTCAACTACAA
# RNA - GEMM_RNA_motif
>Shew_1642(filK) Score=63.2 Pos=-156 [Shewanella loihica PV-4]
TCTCGAAACGGCAAGCATTAAGTAATTAATGTACGCAAAGCCACAGGCCCTAATTGCATAGCAAAAGGGTGGCTGGGTTACCGAATG
# RNA - yybP-ykoY
>Shew_3189(COG2119) Score=53.2 Pos=-192 [Shewanella loihica PV-4]
CCACTGCTTCAGGGGAGTAGCTAACAAGGCAAAGCCATTTGCCTTGAGTGAGTGTCAACATACTTGGCCACATGCCATGGTACTCACGGTAAGGGGAACACCTCTTACTCTGCAAGACCTGAGCACGGTTACC
# RNA - His_leader
>Shew_2197(hisG) Score=46.8 Pos=-188 [Shewanella loihica PV-4]
CATCATCACCATCATATGCGGTAGCCTTCGGATGCTTACTGCCGGAGGACTATTTCCTTCTGGCGGTTGATTCAAAAGCGATCTAAGACCCCTGGAAGGAATTCCGGGGGTTTTTAGTTTTT
# RNA - Leu_leader
>Shew_3472(leuA) Score=20.6 Pos=-134 [Shewanella loihica PV-4]
GGAGAATGTAGTGTTGCACGCTTAATAACACACCCATCATTCATAAACCCCGCGCCCAACAACGCGGGGTTTTTT
# RNA - S15
>Shew_2824(rpsO) Score=99.2 Pos=-56 [Shewanella loihica PV-4]
TCTCTTTGGCTGAGTTAGTGATCGGCTGAAGTTTCTATCTATTTTTGGAGAAAAAAATGTCACTAAGTAAAGAAGTAAAAGCACAAATCCTGGCTGATTTCGGTCGTGGTGAA
# RNA - Thr_leader
>Shew_1079(thrA) Score=29.2 Pos=-155 [Shewanella loihica PV-4]
TAATCTCGTAGTAACCACCATTATTACAACCACCACGATTACCAGCGTGGGGGCCGGCTAAGCATACTCGAAAGAAATGATTTGAAATGACTAAGCCCGCTCCCCATCAAGGAGCGGGTTTTTTTGTTTC
# RNA - Trp_leader
>Shew_2251(trpE) Score=34.5 Pos=-200 [Shewanella loihica PV-4]
TCAACTGGTGGTGGCACTTCCCAACATAGCGGGTGGTGTGAATTTCTGTGCTCATGTAAAAGAGACAAGATTTAAACAAAAAGCCCGCACTCGATGCGGGCTTTTTGCATT
# TF - Fur: Shew_1661
>Shew_0861(fbpA) Score=6.1 Pos=-41 [Shewanella loihica PV-4]
AATTGATAATTATTATCATTA
>Shew_3658 Score=5.3 Pos=-83 [Shewanella loihica PV-4]
AAATGCAACCAATTCTCATTT
>Shew_2300 Score=5.3 Pos=-55 [Shewanella loihica PV-4]
TGTTGAGAATCATTCTCACTA
>Shew_0675(Sfri_0810) Score=6 Pos=-77 [Shewanella loihica PV-4]
TAATGCAAATTATTCTCATTT
>Shew_0042(ftn) Score=5.4 Pos=-381 [Shewanella loihica PV-4]
TAACGATAATTATTTGCATTT
>Shew_3815 Score=6.5 Pos=-46 [Shewanella loihica PV-4]
AAATGATAATAATTATCATTT
>Shew_2873(bfr2) Score=4.8 Pos=-115 [Shewanella loihica PV-4]
GAATGAGAACGATTTTCTTTG
>Shew_2519(mtrD) Score=5.7 Pos=-291 [Shewanella loihica PV-4]
AAACGATAATAATTTTCAATT
>Shew_2519(mtrD) Score=5.8 Pos=-222 [Shewanella loihica PV-4]
AAATGAGAACCATTTTCATTG
>Shew_2518(feoA) Score=5.7 Pos=-123 [Shewanella loihica PV-4]
AATTGAAAATTATTATCGTTT
>Shew_2518(feoA) Score=5.8 Pos=-192 [Shewanella loihica PV-4]
CAATGAAAATGGTTCTCATTT
>Shew_1688(SO4423.1) Score=4.9 Pos=-72 [Shewanella loihica PV-4]
ATATGATAATCTATATCATTC
>Shew_3097(Sden_3064) Score=5.9 Pos=-136 [Shewanella loihica PV-4]
AAATGATAACCATTCCCATTT
>Shew_3120(Sfri_4035) Score=5.7 Pos=-84 [Shewanella loihica PV-4]
TAATGATAATAGTTTGCATTA
>Shew_1181(piuB) Score=5.6 Pos=-108 [Shewanella loihica PV-4]
GAATGAAATTAATTCTCATTA
>Shew_1146 Score=6.3 Pos=-43 [Shewanella loihica PV-4]
AAATGATAATGATTATCAATT
>Shew_1181(piuB) Score=5.6 Pos=-108 [Shewanella loihica PV-4]
GAATGAAATTAATTCTCATTA
>Shew_1936 Score=6 Pos=-31 [Shewanella loihica PV-4]
TAATGATAACTATTATCATTA
>Shew_3841 Score=6 Pos=-69 [Shewanella loihica PV-4]
AAATAAAAACAATTCTCATTT
>Shew_2690 Score=6 Pos=-51 [Shewanella loihica PV-4]
TATTGATAATCGTTATCATTT
>Shew_1240 Score=4.5 Pos=-63 [Shewanella loihica PV-4]
GAATGAGAACCTATCTCAACA
>Shew_0552(bfd) Score=5.4 Pos=-57 [Shewanella loihica PV-4]
CAGTGAGAATCGTTTTCATTT
>Shew_3097 Score=5.9 Pos=-136 [Shewanella loihica PV-4]
AAATGATAACCATTCCCATTT
# TF - Crp: Shew_0585
>Shew_3389(SO4131) Score=3.9 Pos=-217 [Shewanella loihica PV-4]
AAATGTGACACAGGCAACAAAC
>Shew_0333(fdrC) Score=4.4 Pos=-98 [Shewanella loihica PV-4]
TGTTTTGATCTATCTCACGGTT
>Shew_1811(ycbW) Score=4.6 Pos=-94 [Shewanella loihica PV-4]
TGTTGTAATCTATATCATATTT
>Shew_1724(cctA) Score=4.6 Pos=-224 [Shewanella loihica PV-4]
TAGTGTGACGCAGATCATGTTT
>Shew_1724(cctA) Score=4.7 Pos=-174 [Shewanella loihica PV-4]
ATATTTGATTAAGTGCACATTT
>Shew_0428(SO0543) Score=4.2 Pos=-190 [Shewanella loihica PV-4]
TAGTGTTAACTCGATCAAACAA
>Shew_0866(argR) Score=4.6 Pos=-282 [Shewanella loihica PV-4]
TTATGTGATATAGATCTAGATT
>Shew_3394(Sputcn32_0539) Score=4.1 Pos=-144 [Shewanella loihica PV-4]
TTGCTTGATATGCTTCACGCTA
>Shew_0678(hemG) Score=4.1 Pos=-126 [Shewanella loihica PV-4]
ATTTGTGACATCGGTAAACTTA
>Shew_3424(acnB) Score=4.3 Pos=-140 [Shewanella loihica PV-4]
GAGTGTGATCTGATTCATACTT
>Shew_0191(scyA) Score=4.8 Pos=-131 [Shewanella loihica PV-4]
AATTCTGATATTAATCACAAAA
>Shew_0191(scyA) Score=3.8 Pos=-242 [Shewanella loihica PV-4]
CAATTTGATATGCTTCCAAAAA
>Shew_0200(ppc) Score=4.3 Pos=-107 [Shewanella loihica PV-4]
CAAGGTGATATAGAACACATAA
>Shew_3758(hutC) Score=4.1 Pos=-138 [Shewanella loihica PV-4]
TTATGTGAGCTAGCTTGTATTT
>Shew_1835(ydhD) Score=4.2 Pos=-164 [Shewanella loihica PV-4]
AGTTGTGATGTGAATCATTGTT
>Shew_1667(atoB) Score=4.2 Pos=-75 [Shewanella loihica PV-4]
TTATTTGAACATGATCACGCTT
>Shew_0867(mdh) Score=4.5 Pos=-47 [Shewanella loihica PV-4]
AATCTAGATCTATATCACATAA
>Shew_1438(fahA) Score=4.4 Pos=-130 [Shewanella loihica PV-4]
GAGTGTGATTTGTATCACGCTA
>Shew_1972(SO1419) Score=4.5 Pos=-120 [Shewanella loihica PV-4]
TTTTGTTAAGCAGATCAAAATA
>Shew_0844(nrfA) Score=4.5 Pos=-156 [Shewanella loihica PV-4]
AAATGTGACCAACAACACATTC
>Shew_0844(nrfA) Score=4.2 Pos=-133 [Shewanella loihica PV-4]
CATTATGATCTGCCTCAAGTTT
>Shew_2677(fixA) Score=4.2 Pos=-234 [Shewanella loihica PV-4]
AAATGTGAAGCGTGTAACATCA
>Shew_3393(SO4138) Score=3.9 Pos=-109 [Shewanella loihica PV-4]
TAGCGTGAAGCATATCAAGCAA
>Shew_0333(fdrC2) Score=4.4 Pos=-98 [Shewanella loihica PV-4]
TGTTTTGATCTATCTCACGGTT
>Shew_2518(feoA) Score=5.2 Pos=-245 [Shewanella loihica PV-4]
ATATGTGATCTAGATCACGTTG
>Shew_2153(hmgR) Score=5.1 Pos=-115 [Shewanella loihica PV-4]
TTATGTGATCTAAGTAACAATT
>Shew_1497(Sfri_2271) Score=4.3 Pos=-123 [Shewanella loihica PV-4]
TAACTTGAACTGGCTCACGTAA
>Shew_3205(napD) Score=3.8 Pos=-154 [Shewanella loihica PV-4]
AACTTTGATCTCGATCTACAAA
>Shew_2074 Score=5.1 Pos=-308 [Shewanella loihica PV-4]
TTTTGTGATAATGGTCACACTT
>Shew_3120(Sfri_4035) Score=4.2 Pos=-108 [Shewanella loihica PV-4]
TTTGTTGATCTTAATCAAAAAA
>Shew_0073(SO4520) Score=4.1 Pos=-182 [Shewanella loihica PV-4]
AAACATGACATGCTTAACAATT
>Shew_3103(SO3683) Score=4.2 Pos=-201 [Shewanella loihica PV-4]
CCACTTGATCCAGATCACATTT
>Shew_0757(cadC) Score=4.3 Pos=-115 [Shewanella loihica PV-4]
TTATGTGCTGATTGTCACGAAA
>Shew_3394(kefA) Score=4.1 Pos=-144 [Shewanella loihica PV-4]
TTGCTTGATATGCTTCACGCTA
>Shew_1563(icd) Score=3.8 Pos=-237 [Shewanella loihica PV-4]
ATTTATGATGTCGGCCAACTAA
>Shew_1563(icd) Score=4.1 Pos=-217 [Shewanella loihica PV-4]
AAATGTGATCGATAGCAAAACG
>Shew_0454(SO0572) Score=4.3 Pos=-124 [Shewanella loihica PV-4]
TATTTTGACGCCAGTCAAAAAA
>Shew_2881(nqrA-2) Score=4.3 Pos=-131 [Shewanella loihica PV-4]
CAGCGTGATTGCGATCGCATTT
>Shew_0086(etfD) Score=4.5 Pos=-148 [Shewanella loihica PV-4]
TAATGTGACACCGCTCACGAAG
>Shew_0818(SO3797) Score=3.7 Pos=-26 [Shewanella loihica PV-4]
ATCTGTGATCTGATTCGAGACT
>Shew_0615(SO3774) Score=3.9 Pos=-146 [Shewanella loihica PV-4]
AAGAGTGTCCCTCGTCACATTT
>Shew_2238 Score=4.1 Pos=-48 [Shewanella loihica PV-4]
AAAATTGATCTAGATCAATAAA
>Shew_1092(SO3541) Score=4.4 Pos=-210 [Shewanella loihica PV-4]
AACTGTGATCTGTATCACATGG
>Shew_0699(nhaD) Score=4.2 Pos=-77 [Shewanella loihica PV-4]
AAACTTGAGGCGCATCAAAATT
>Shew_2760(icd) Score=4.4 Pos=-150 [Shewanella loihica PV-4]
AAACGTGAGATTGCTCACTATT
>Shew_0041(SO0141) Score=4 Pos=-55 [Shewanella loihica PV-4]
TTTCGTGACCTAGATTAGACTT
>Shew_0331(prmA) Score=3.8 Pos=-274 [Shewanella loihica PV-4]
AAGCGTGAGACACCTCACCCTG
>Shew_0331(prmA) Score=4.1 Pos=-242 [Shewanella loihica PV-4]
ACATTTGACGTCGATCACAAAC
>Shew_1840(SO2871) Score=3.8 Pos=-51 [Shewanella loihica PV-4]
CCCTGTGACTCGGCTCACCTTT
>Shew_1302(cydA) Score=4.7 Pos=-206 [Shewanella loihica PV-4]
TTTTGTGAGCCGCCTCTCAAAA
>Shew_0570(petA) Score=3.9 Pos=-101 [Shewanella loihica PV-4]
TAATGAGCCCCGCCTCAAATTT
>Shew_0570(petA) Score=4.1 Pos=-130 [Shewanella loihica PV-4]
TACTATGATCTGCTTCTAATTT
>Shew_0087(moaA) Score=4.4 Pos=-189 [Shewanella loihica PV-4]
CTTCGTGAGCGGTGTCACATTA
>Shew_0125(SO4606) Score=4.4 Pos=-321 [Shewanella loihica PV-4]
AAAAGTGATCTTGATCAATATT
>Shew_0125(SO4606) Score=4 Pos=-264 [Shewanella loihica PV-4]
TTATTTGTTATATCGCACAATT
>Shew_0586(sel1) Score=3.8 Pos=-279 [Shewanella loihica PV-4]
ATTAGTAATATATGTCAACTAA
>Shew_0699(nhaD) Score=3.8 Pos=-227 [Shewanella loihica PV-4]
AAGCGTGATCCTGTGCTAACTT
>Shew_0739(SO0919) Score=3.9 Pos=-188 [Shewanella loihica PV-4]
AAGTTAGATTCGGCTCACAAAG
>Shew_3181(shew_3181) Score=4.3 Pos=-207 [Shewanella loihica PV-4]
TTTTGTGAAGCACAGCAAAGAT
>Shew_0318(hemC) Score=4.7 Pos=-119 [Shewanella loihica PV-4]
ATTTGAGAGCTGGATCACACTT
>Shew_3776(SO0075) Score=4.7 Pos=-110 [Shewanella loihica PV-4]
TTTTGTGCTCCAATTAACATTA
>Shew_1033(SO1326) Score=4 Pos=-127 [Shewanella loihica PV-4]
TACAGTGAATTATTTAACAAAT
>Shew_1033(SO1326) Score=4.4 Pos=-148 [Shewanella loihica PV-4]
AAAAGTGATTTTTATTGCATAT
>Shew_2881(nqrA-2) Score=4.1 Pos=-73 [Shewanella loihica PV-4]
ATGTTTGAAATCTATCTCATTT
>Shew_2519(mtrD) Score=5.3 Pos=-170 [Shewanella loihica PV-4]
CAACGTGATCTAGATCACATAT
>Shew_2519(mtrD) Score=4.5 Pos=-260 [Shewanella loihica PV-4]
TTATGTGACAGATATCTCAATC
>Shew_3260(omp35) Score=4.1 Pos=-150 [Shewanella loihica PV-4]
AAATTTGATCTGCGCCACACTC
>Shew_1765(hyaA) Score=3.8 Pos=-164 [Shewanella loihica PV-4]
AAACTTGATCCAGCTCATAGCT
>Shew_1765(hyaA) Score=3.7 Pos=-103 [Shewanella loihica PV-4]
AATGTTGACATACATCAACATT
>Shew_3252(Shewana3_0734) Score=4.2 Pos=-163 [Shewanella loihica PV-4]
ATTTGCGACACGGATCACACCT
>Shew_3252(Shewana3_0734) Score=3.8 Pos=-193 [Shewanella loihica PV-4]
CAACATGATAAAACTCACGTAA
>Shew_3658 Score=3.6 Pos=-101 [Shewanella loihica PV-4]
TATTGCCAAGCGGATCGCAAAT
>Shew_2154(hmgA) Score=5.1 Pos=-61 [Shewanella loihica PV-4]
AATTGTTACTTAGATCACATAA
>Shew_1069(hcp) Score=4.5 Pos=-125 [Shewanella loihica PV-4]
TAATTTGATCCGCTTCATAGTT
>Shew_0578(astC) Score=3.8 Pos=-140 [Shewanella loihica PV-4]
AACTGGTATTTTGATCACGTTT
>Shew_0585(crp) Score=4 Pos=-238 [Shewanella loihica PV-4]
AGATGTGATATGGGCAACATTG
>Shew_3251(SO3895) Score=4.6 Pos=-226 [Shewanella loihica PV-4]
AGGTGTGATCCGTGTCGCAAAT
>Shew_3251(SO3895) Score=3.8 Pos=-196 [Shewanella loihica PV-4]
TTACGTGAGTTTTATCATGTTG
>Shew_1904(fumB) Score=3.9 Pos=-111 [Shewanella loihica PV-4]
AAATGTGATGTTCCCCTAAAAG
>Shew_1904(fumB) Score=4.8 Pos=-73 [Shewanella loihica PV-4]
TATTGTGAACGGATTCAAAAAA
>Shew_1522(SO2753) Score=3.5 Pos=-276 [Shewanella loihica PV-4]
ATTTGCGCTTGATTACGCAAAA
>Shew_1515(SO2757) Score=4 Pos=-230 [Shewanella loihica PV-4]
ATTTGGGATCATTGTCACTTTT
>Shew_2107(SO2535) Score=4.6 Pos=-191 [Shewanella loihica PV-4]
TTATATGACCATAATCACAATT
>Shew_0190(ccmA) Score=4.8 Pos=-223 [Shewanella loihica PV-4]
TTTTGTGATTAATATCAGAATT
>Shew_0053(SO4503) Score=4 Pos=-190 [Shewanella loihica PV-4]
TAGTTTGAACTGGATCATCAAA
>Shew_3716(cytcB) Score=4.4 Pos=-95 [Shewanella loihica PV-4]
AAATATTACCCCGATCACATAA
>Shew_0288(ilvC) Score=3.8 Pos=-77 [Shewanella loihica PV-4]
ATAGTTGATCTCATTCACAGCT
>Shew_0288(ilvC) Score=3.7 Pos=-126 [Shewanella loihica PV-4]
CAATGTGACGTTTCGAATATAT
>Shew_3412(purH) Score=4 Pos=-182 [Shewanella loihica PV-4]
TATTGTGAAATCGCACAGAAAA
>Shew_0259(ygbA) Score=4.1 Pos=-96 [Shewanella loihica PV-4]
TTTTGTGCGCATCTTCATAATT
>Shew_1834(sodB) Score=3.8 Pos=-89 [Shewanella loihica PV-4]
AACAATGATTCACATCACAACT
>Shew_0759(SO0939) Score=4.1 Pos=-246 [Shewanella loihica PV-4]
TAGAGTGATCAGCTTCACATCG
>Shew_2426(fadI) Score=3.9 Pos=-134 [Shewanella loihica PV-4]
AAGTTAGAATCAGATCACACTT
>Shew_3425(yniC) Score=4.1 Pos=-295 [Shewanella loihica PV-4]
AAGTATGAATCAGATCACACTC
>Shew_0560 Score=4.1 Pos=-99 [Shewanella loihica PV-4]
AACTATGACATTGTTCAAAAAA
>Shew_2389(Spea_1673) Score=4 Pos=-301 [Shewanella loihica PV-4]
AGATGTTAACTAGCTCCCAAAT
>Shew_1074(SO3421) Score=4.9 Pos=-208 [Shewanella loihica PV-4]
AAACGTGATCTAGATCAACTTT
>Shew_3540(cymA) Score=4.2 Pos=-169 [Shewanella loihica PV-4]
TATTATGAGCAATTTCATAAAA
>Shew_0272(SO1410) Score=3.9 Pos=-151 [Shewanella loihica PV-4]
ATTCGCGAGCCAAGTCACGAAT
>Shew_0272(SO1410) Score=4.6 Pos=-110 [Shewanella loihica PV-4]
TGGCGTGATCCATTTCACCTTT
>Shew_3657(prlC) Score=3.8 Pos=-247 [Shewanella loihica PV-4]
ATTTGCGATCCGCTTGGCAATA
>Shew_3086(Sama_2599) Score=3.7 Pos=-117 [Shewanella loihica PV-4]
AAGCGTTAGCCCACTCACAAAG
>Shew_3716(cytcB) Score=4.4 Pos=-95 [Shewanella loihica PV-4]
AAATATTACCCCGATCACATAA
>Shew_2941(lipB) Score=5.3 Pos=-70 [Shewanella loihica PV-4]
AAATGTGATCTACCTTACATTT
>Shew_0319(cyaA) Score=5.1 Pos=-88 [Shewanella loihica PV-4]
AAGTGTGATCCAGCTCTCAAAT
>Shew_2759(SO1539) Score=4.4 Pos=-171 [Shewanella loihica PV-4]
AATAGTGAGCAATCTCACGTTT
>Shew_3715(engB) Score=4.7 Pos=-95 [Shewanella loihica PV-4]
TTATGTGATCGGGGTAATATTT
>Shew_1036(cyaC) Score=4.6 Pos=-162 [Shewanella loihica PV-4]
TCATTTGACTTAGATCACAAAT
>Shew_2427(SO3090) Score=4.6 Pos=-296 [Shewanella loihica PV-4]
AAGTGTGATCTGATTCTAACTT
>Shew_0778(SO3987) Score=4.4 Pos=-82 [Shewanella loihica PV-4]
TAAAGTGACCTGTCTCACACCT
>Shew_0778(SO3987) Score=5.1 Pos=-147 [Shewanella loihica PV-4]
AGATTTGATGTAAATCACATTT
>Shew_0455(Sama_3134) Score=4.9 Pos=-94 [Shewanella loihica PV-4]
CAATGTGATCTGCTTCACACTC
>Shew_3390(udp) Score=4.6 Pos=-92 [Shewanella loihica PV-4]
AAGTGTGATCAGGTTAACCTTA
>Shew_1091(phk) Score=4.6 Pos=-238 [Shewanella loihica PV-4]
CCATGTGATACAGATCACAGTT
>Shew_1091(phk) Score=4 Pos=-97 [Shewanella loihica PV-4]
AAATAAGATATTGAACACATTT
>Shew_1985(ccoN) Score=4.5 Pos=-178 [Shewanella loihica PV-4]
TTTTTTGATATTGCTCAAGTAT
>Shew_1435(phhA) Score=4.7 Pos=-40 [Shewanella loihica PV-4]
AAGTGTGATCCTGTTAACAAAC
>Shew_2188(fadD1) Score=4.9 Pos=-149 [Shewanella loihica PV-4]
TTGTGTGATGATGTTCAAAATT
>Shew_2518(feoA) Score=4.2 Pos=-155 [Shewanella loihica PV-4]
GATTGAGATATCTGTCACATAA
>Shew_0760(cadC) Score=3.9 Pos=-234 [Shewanella loihica PV-4]
CGATGTGAAGCTGATCACTCTA
>Shew_0516(SO4142) Score=4.1 Pos=-113 [Shewanella loihica PV-4]
GAAGGTGATCAACATCAAATTT
>Shew_0613(cydD) Score=4.5 Pos=-129 [Shewanella loihica PV-4]
TTTTTTGATCTAGCTCAATTTT
>Shew_0613(cydD) Score=4.8 Pos=-110 [Shewanella loihica PV-4]
TTTTGTGAGCCTAATAACAATT
>Shew_0671(swp_4060) Score=4 Pos=-217 [Shewanella loihica PV-4]
AATAGTGATGAGGTTAATATAG
>Shew_3135(lldP) Score=4.2 Pos=-166 [Shewanella loihica PV-4]
CATAATGATCTAGATCATATTT
>Shew_3135(lldP) Score=4.2 Pos=-247 [Shewanella loihica PV-4]
ACCAGTGATAGAGATCACACTT
>Shew_3623(pckA) Score=4.6 Pos=-128 [Shewanella loihica PV-4]
TTTCGCGATCTTCCTCACACAT
>Shew_2108(fadE2) Score=4.9 Pos=-71 [Shewanella loihica PV-4]
AATTGTGATTATGGTCATATAA
>Shew_3102 Score=4.2 Pos=-84 [Shewanella loihica PV-4]
AAATGTGATCTGGATCAAGTGG
>Shew_1590(SO2589) Score=4.3 Pos=-85 [Shewanella loihica PV-4]
AAACGTGATTTTTATCACACCC
>Shew_1073(yfiA-2) Score=4.6 Pos=-76 [Shewanella loihica PV-4]
AAAGTTGATCTAGATCACGTTT
>Shew_1516(Swoo_2741) Score=4.1 Pos=-105 [Shewanella loihica PV-4]
AAAAGTGACAATGATCCCAAAT
>Shew_0843(narQ) Score=4.4 Pos=-113 [Shewanella loihica PV-4]
GAATGTGTTGTTGGTCACATTT
>Shew_2525(mtrC) Score=3.6 Pos=-179 [Shewanella loihica PV-4]
TAGAAAGATCTCGGTCACACAT
>Shew_3155 Score=3.9 Pos=-286 [Shewanella loihica PV-4]
AAAATAGATCTTGATCATATTT
>Shew_1222(Shew_1222) Score=5 Pos=-66 [Shewanella loihica PV-4]
TAGTGTGATGCAGCTCTCAATA
>Shew_0843(narQ) Score=3.9 Pos=-136 [Shewanella loihica PV-4]
AAACTTGAGGCAGATCATAATG
>Shew_3153(Sama_2899) Score=4.2 Pos=-137 [Shewanella loihica PV-4]
AACTGTGATGTGATCCGCAGAA
>Shew_0506(SO4154) Score=3.9 Pos=-30 [Shewanella loihica PV-4]
TATTGAAATCATTTTCAAAAAA
>Shew_0506(SO4154) Score=4 Pos=-9 [Shewanella loihica PV-4]
ATTTTTGATATGTATCATCTCA
>Shew_1971(apbE) Score=4.9 Pos=-99 [Shewanella loihica PV-4]
TATTTTGATCTGCTTAACAAAA
>Shew_1556(SO2637) Score=4.2 Pos=-132 [Shewanella loihica PV-4]
AATTGTGATCGGCGTGGCAATT
>Shew_2816(tsx) Score=4 Pos=-99 [Shewanella loihica PV-4]
TATTGTGATTTAATACAATTTG
>Shew_0054 Score=4.1 Pos=-127 [Shewanella loihica PV-4]
TTTGATGATCCAGTTCAAACTA
>Shew_0277(SO1415) Score=4.4 Pos=-137 [Shewanella loihica PV-4]
TTGTTTGACGTAATTCACAAAG
>Shew_0904(SO3588) Score=4.4 Pos=-97 [Shewanella loihica PV-4]
TATTGTGATGCCCTTAAGACTT
>Shew_1035(SO1328) Score=3.8 Pos=-110 [Shewanella loihica PV-4]
TTTTGGGCAGCGCTTCACACTT
>Shew_3003(fadE) Score=4.9 Pos=-49 [Shewanella loihica PV-4]
TTTTGTGACGTAATGCACACTA
>Shew_2814(deoA) Score=4 Pos=-133 [Shewanella loihica PV-4]
AAGTGTGATCTAAATCTATTTG
>Shew_0276(SO1414) Score=4.2 Pos=-216 [Shewanella loihica PV-4]
CTTTGTGAATTACGTCAAACAA
# TF - NarP: Shew_0842
>Shew_3205(napD) Score=4.9 Pos=-123 [Shewanella loihica PV-4]
TACCTCTCAAGAGGTA
>Shew_0073(SO4520) Score=4.3 Pos=-106 [Shewanella loihica PV-4]
TATTCCTTAAGTGATA
>Shew_3112(fccA) Score=4.5 Pos=-268 [Shewanella loihica PV-4]
TACCTCTTTGTGATTA
>Shew_0843(narQ) Score=5.1 Pos=-161 [Shewanella loihica PV-4]
TACCCCTTATGGGGTA
>Shew_3260(omp35) Score=4.9 Pos=-261 [Shewanella loihica PV-4]
TACCCCTTTGGGAGTA
>Shew_1768(napE2) Score=4.5 Pos=-153 [Shewanella loihica PV-4]
TACCGATTTAGGGGTA
>Shew_2524(omcA) Score=5.1 Pos=-214 [Shewanella loihica PV-4]
TACCTCTAAAGAAATA
>Shew_2655(Shew_2655) Score=5 Pos=-166 [Shewanella loihica PV-4]
TACCACTTTAGAGATA
>Shew_2281(SO3058) Score=3.8 Pos=-107 [Shewanella loihica PV-4]
CCCCTCTTTTTAGGTA
>Shew_2655(Shew_2655) Score=4.3 Pos=-152 [Shewanella loihica PV-4]
TACCTCTAATTCAGTA
>Shew_0699(nhaD) Score=4.8 Pos=-156 [Shewanella loihica PV-4]
TACCACTTTGTAGGTA
>Shew_0844(nrfA) Score=5 Pos=-102 [Shewanella loihica PV-4]
TACCCCATAAGGGGTA
>Shew_2580(SO3141) Score=5 Pos=-248 [Shewanella loihica PV-4]
TACCTCCAAAGAGATA
>Shew_0504(nnrS2) Score=4.4 Pos=-177 [Shewanella loihica PV-4]
TGCCTATAAAGAGGTA
>Shew_2525(mtrC) Score=5.2 Pos=-193 [Shewanella loihica PV-4]
TACCCCTTTAGAAATA
>Shew_0918(mtrF) Score=4.8 Pos=-21 [Shewanella loihica PV-4]
TACCTATAAAGGGATA
# TF - Fnr: Shew_1993
>Shew_0086(etfD) Score=3.9 Pos=-175 [Shewanella loihica PV-4]
TTGTTTAAGATCAA
>Shew_3155(nrfX) Score=4.3 Pos=-282 [Shewanella loihica PV-4]
TAGATCTTGATCAT
>Shew_0844(nrfA) Score=4.8 Pos=-129 [Shewanella loihica PV-4]
ATGATCTGCCTCAA
>Shew_2873(bfr2) Score=5.3 Pos=-33 [Shewanella loihica PV-4]
TTGATTTAGATCAA
>Shew_0843(narQ) Score=4.5 Pos=-132 [Shewanella loihica PV-4]
TTGAGGCAGATCAT
>Shew_2519(mtrD) Score=4.9 Pos=-318 [Shewanella loihica PV-4]
TTTATCTAGATCAA
>Shew_1994(uspE) Score=4.6 Pos=-72 [Shewanella loihica PV-4]
TTGATCTAAAACAA
>Shew_2518(feoA) Score=4.9 Pos=-89 [Shewanella loihica PV-4]
TTGATCTAGATAAA
>Shew_1302(cydA) Score=4.4 Pos=-51 [Shewanella loihica PV-4]
TTGATGGGGATCTA
>Shew_2655(Shew_2655) Score=4.5 Pos=-80 [Shewanella loihica PV-4]
TTGTTTTAGATCAA
>Shew_2554(ompW) Score=5.2 Pos=-104 [Shewanella loihica PV-4]
TTGATTTGGATCAA
>Shew_0087(moaA) Score=4.2 Pos=-154 [Shewanella loihica PV-4]
TTGATCTTAAACAA
>Shew_3263(SO0579) Score=4.6 Pos=-124 [Shewanella loihica PV-4]
TTGATATAGGTCAA
>Shew_1036(cyaB) Score=4 Pos=-158 [Shewanella loihica PV-4]
TTGACTTAGATCAC
>Shew_1985(ccoN) Score=4.5 Pos=-174 [Shewanella loihica PV-4]
TTGATATTGCTCAA
>Shew_1985(ccoN) Score=5.6 Pos=-217 [Shewanella loihica PV-4]
TTGATCTGGATCAA
>Shew_3354(nifS) Score=5.1 Pos=-113 [Shewanella loihica PV-4]
ATGATCTTGATCAA
>Shew_2449(nrdD) Score=5.4 Pos=-122 [Shewanella loihica PV-4]
ATGATCTGGATCAA
>Shew_0125(coxB) Score=4.9 Pos=-317 [Shewanella loihica PV-4]
GTGATCTTGATCAA
>Shew_0613(cydD) Score=5.3 Pos=-125 [Shewanella loihica PV-4]
TTGATCTAGCTCAA
>Shew_0053(fdhD) Score=5 Pos=-186 [Shewanella loihica PV-4]
TTGAACTGGATCAT
>Shew_0332(frdC2) Score=3.9 Pos=-122 [Shewanella loihica PV-4]
GTGATCGACGTCAA
>Shew_1765(hyaA) Score=4.8 Pos=-160 [Shewanella loihica PV-4]
TTGATCCAGCTCAT
>Shew_1765(hyaA) Score=4.2 Pos=-99 [Shewanella loihica PV-4]
TTGACATACATCAA
>Shew_1765(hyaA) Score=4.7 Pos=-220 [Shewanella loihica PV-4]
TTGAAGCGGATCAA
>Shew_2050(pykA) Score=4.7 Pos=-94 [Shewanella loihica PV-4]
TTGAGATAGATCAT
>Shew_1302(cydA) Score=4.9 Pos=-341 [Shewanella loihica PV-4]
TTGATTTGAATCAA
>Shew_2519(mtrD) Score=4.6 Pos=-166 [Shewanella loihica PV-4]
GTGATCTAGATCAC
>Shew_1768(napE2) Score=5.1 Pos=-181 [Shewanella loihica PV-4]
ATGATCCAGATCAA
>Shew_1835(ydhD) Score=4.5 Pos=-160 [Shewanella loihica PV-4]
GTGATGTGAATCAT
>Shew_3247(Sama_0549) Score=4.4 Pos=-87 [Shewanella loihica PV-4]
TTGATCGAGATCAG
>Shew_0054(SO4504) Score=4.5 Pos=-123 [Shewanella loihica PV-4]
ATGATCCAGTTCAA
>Shew_3205(napD) Score=4.7 Pos=-150 [Shewanella loihica PV-4]
TTGATCTCGATCTA
>Shew_0743(gltP) Score=4.2 Pos=-153 [Shewanella loihica PV-4]
TTGATATGAATCAC
>Shew_1069(hcp) Score=4.1 Pos=-121 [Shewanella loihica PV-4]
TTGATCCGCTTCAT
>Shew_3424(acnB) Score=4.1 Pos=-136 [Shewanella loihica PV-4]
GTGATCTGATTCAT
>Shew_3135(lldP) Score=5.3 Pos=-162 [Shewanella loihica PV-4]
ATGATCTAGATCAT
>Shew_2518(feoA) Score=4.6 Pos=-241 [Shewanella loihica PV-4]
GTGATCTAGATCAC
# TF - MetJ: Shew_0519
>Shew_0710(metH) Score=6.6 Pos=-97 [Shewanella loihica PV-4]
AGACGTCTATACGTTT
>Shew_0710(metH) Score=5.5 Pos=-89 [Shewanella loihica PV-4]
ATACGTTTATACATCC
>Shew_2987(metR) Score=6.7 Pos=-97 [Shewanella loihica PV-4]
AGGCGTCTGGACGTCT
>Shew_2987(metR) Score=6.4 Pos=-89 [Shewanella loihica PV-4]
GGACGTCTAGAAGTTT
>Shew_2710(metY) Score=6.4 Pos=-81 [Shewanella loihica PV-4]
AAACATTTAGACATCT
>Shew_2710(metY) Score=6.9 Pos=-73 [Shewanella loihica PV-4]
AGACATCTAGAAGTCT
>Shew_0751(metK) Score=5.4 Pos=-61 [Shewanella loihica PV-4]
GGCCGTCTAGATGTAG
>Shew_0751(metK) Score=5.2 Pos=-53 [Shewanella loihica PV-4]
AGATGTAGATACTTCT
>Shew_2986(metE) Score=6.6 Pos=-127 [Shewanella loihica PV-4]
AAACTTCTAGACGTCC
>Shew_2986(metE) Score=6.8 Pos=-119 [Shewanella loihica PV-4]
AGACGTCCAGACGCCT
>Shew_2990(btuB) Score=6.2 Pos=-424 [Shewanella loihica PV-4]
ATACGTGTAGACGTCT
>Shew_2990(btuB) Score=5.6 Pos=-432 [Shewanella loihica PV-4]
AGACATTTATACGTGT
>Shew_1789(metC) Score=5.5 Pos=-53 [Shewanella loihica PV-4]
AGCCGTATAGATGTTA
>Shew_1789(metC) Score=5.3 Pos=-45 [Shewanella loihica PV-4]
AGATGTTAAGATGGCT
>Shew_2552(COG3126) Score=6.2 Pos=-48 [Shewanella loihica PV-4]
AGACATATGGACATCC
>Shew_2552(COG3126) Score=6.3 Pos=-40 [Shewanella loihica PV-4]
GGACATCCAGAAGTCT
>Shew_2552(COG3126) Score=5.6 Pos=-32 [Shewanella loihica PV-4]
AGAAGTCTTGATGTAT
>Shew_0520(metB) Score=7.2 Pos=-61 [Shewanella loihica PV-4]
AGACGTCCAGACATCT
>Shew_0520(metB) Score=6.7 Pos=-115 [Shewanella loihica PV-4]
GGACGTCTAAACGTCC
>Shew_1923(msrA) Score=6.5 Pos=-128 [Shewanella loihica PV-4]
AGCCGTCTAGCCATCT
>Shew_3178(metT) Score=7.1 Pos=-172 [Shewanella loihica PV-4]
AAACATCTAGACGTCT
>Shew_3178(metT) Score=5.3 Pos=-164 [Shewanella loihica PV-4]
AGACGTCTAAATTGAC
>Shew_0519(metJ) Score=5.9 Pos=-109 [Shewanella loihica PV-4]
AAACATTTAGAAATCT
>Shew_0519(metJ) Score=6.4 Pos=-117 [Shewanella loihica PV-4]
AGACGTCCAAACATTT
>Shew_0519(metJ) Score=6.6 Pos=-125 [Shewanella loihica PV-4]
GGACGTTTAGACGTCC
>Shew_0519(metJ) Score=6 Pos=-171 [Shewanella loihica PV-4]
GGACGTCTAAATGTAC
>Shew_0519(metJ) Score=7 Pos=-179 [Shewanella loihica PV-4]
AGATGTCTGGACGTCT
>Shew_0522(metF) Score=6.4 Pos=-58 [Shewanella loihica PV-4]
GGACATATAGACGTCC
>Shew_0522(metF) Score=7.1 Pos=-50 [Shewanella loihica PV-4]
AGACGTCCAAACGTCT
>Shew_1923(msrA) Score=6.3 Pos=-120 [Shewanella loihica PV-4]
AGCCATCTAAACGTAT
# TF - TsrR: Shew_0358
>Shew_0347(ccmF-2) Score=6.2 Pos=-169 [Shewanella loihica PV-4]
GCATTTTTAGATCTCAAAAAAG
>Shew_0347(ccmF-2) Score=5.4 Pos=-139 [Shewanella loihica PV-4]
GCTTTTTGAGTTATGAAAAATA
>Shew_0348(tsrA) Score=5.4 Pos=-320 [Shewanella loihica PV-4]
TATTTTTCATAACTCAAAAAGC
>Shew_0348(tsrA) Score=6.2 Pos=-290 [Shewanella loihica PV-4]
CTTTTTTGAGATCTAAAAATGC
# TF - PhsR: Shew_0609
>Shew_0608(phsA) Score=6.6 Pos=-131 [Shewanella loihica PV-4]
GCCTATGTGGTTTACCACAATACC