# TF - DosR: RHA1_ro00048, RHA1_ro02256
>RHA1_ro00030 Score=4.7 Pos=-90 [Rhodococcus sp. RHA1]
TAGGGCCGATGGTCACTG
>RHA1_ro00030 Score=4.3 Pos=-52 [Rhodococcus sp. RHA1]
TCGGGCCGGAAGACCCTA
>RHA1_ro00059 Score=4.3 Pos=-68 [Rhodococcus sp. RHA1]
TGAGGTCCTAGGACCCTT
>RHA1_ro00059 Score=4.3 Pos=-127 [Rhodococcus sp. RHA1]
CAGGGCATTTGGACCCTT
>RHA1_ro03145 Score=3.8 Pos=-96 [Rhodococcus sp. RHA1]
AGGGGCACGAAGTCCCGA
>RHA1_ro00027(acg) Score=4.3 Pos=-110 [Rhodococcus sp. RHA1]
CGATGACCTACGGCCCTA
>RHA1_ro00048(dosR) Score=4.4 Pos=-489 [Rhodococcus sp. RHA1]
TGGTGACTTTCGGCCCTG
>RHA1_ro02263(usp) Score=4.8 Pos=-73 [Rhodococcus sp. RHA1]
TGGGGACTTAAGTCCCTC
>RHA1_ro00058 Score=4.3 Pos=-117 [Rhodococcus sp. RHA1]
AAGGGTCCAAATGCCCTG
>RHA1_ro00058 Score=4.3 Pos=-176 [Rhodococcus sp. RHA1]
AAGGGTCCTAGGACCTCA
>RHA1_ro00053 Score=4.3 Pos=-115 [Rhodococcus sp. RHA1]
CAGAGCCTTTGGTCCTCG
>RHA1_ro02256(dosR) Score=4.4 Pos=-101 [Rhodococcus sp. RHA1]
TTGGGTCGAAGGTCCCGA
>RHA1_ro08739(Mmcs_1080) Score=4.3 Pos=-148 [Rhodococcus sp. RHA1]
CCGTGACGTTGGTCCCTT
>RHA1_ro00031(nitroreductase) Score=4.3 Pos=-123 [Rhodococcus sp. RHA1]
TAGGGTCTTCCGGCCCGA
>RHA1_ro00031(nitroreductase) Score=4.7 Pos=-85 [Rhodococcus sp. RHA1]
CAGTGACCATCGGCCCTA
>RHA1_ro00054(Mmcs_1106) Score=4.3 Pos=-79 [Rhodococcus sp. RHA1]
CGAGGACCAAAGGCTCTG
>RHA1_ro02257(Rv3131 ) Score=4.4 Pos=-89 [Rhodococcus sp. RHA1]
TCGGGACCTTCGACCCAA
>RHA1_ro00025 Score=4.3 Pos=-137 [Rhodococcus sp. RHA1]
CGATGACCTTGGGCCCTA
>RHA1_ro08645(DGAT) Score=4.3 Pos=-188 [Rhodococcus sp. RHA1]
CCGGGACTTTCGGCCTCG
>RHA1_ro00042(RHA1_ro00042) Score=4.1 Pos=-69 [Rhodococcus sp. RHA1]
TAGGGTCTACCGTCACTT
>RHA1_ro00050(usp) Score=3.9 Pos=-92 [Rhodococcus sp. RHA1]
TGGGGACCTTCTCCCCTA
>RHA1_ro05356(DGAT) Score=5.1 Pos=-316 [Rhodococcus sp. RHA1]
TAGGGACTTTCGGCCCTA
# TF - Rex: RHA1_ro02054
>RHA1_ro06034(fadD) Score=4.8 Pos=-48 [Rhodococcus sp. RHA1]
ATGTGATCGAATGCACAT
>RHA1_ro11313(COG1960) Score=4.6 Pos=-172 [Rhodococcus sp. RHA1]
TTGTGGACCTCTTCACTA
>RHA1_ro06201(choD) Score=4.7 Pos=-71 [Rhodococcus sp. RHA1]
TTGTGGCAGCTGTCACAA
>RHA1_ro05230(coxM) Score=4.7 Pos=-17 [Rhodococcus sp. RHA1]
TTGTGAGGTAGGTCACAA
>RHA1_ro05909(nuoA) Score=4.1 Pos=-88 [Rhodococcus sp. RHA1]
CTGTGGCATAACTCACAA
>RHA1_ro01583(pntAa) Score=5.1 Pos=-215 [Rhodococcus sp. RHA1]
CTGTGACCGGGTTCACAA
>RHA1_ro02831(dhaS) Score=5.1 Pos=-40 [Rhodococcus sp. RHA1]
TTGTGACAGCCATCACAA
>RHA1_ro06345(whiB) Score=6.1 Pos=-103 [Rhodococcus sp. RHA1]
TCGTGAAAGCATTCACAA
# TF - PaaR: RHA1_ro02633
>RHA1_ro02633(paaR) Score=4.7 Pos=-80 [Rhodococcus sp. RHA1]
TTCAACCGAACCTTCGGTCGGC
>RHA1_ro02864(paaZ) Score=5.1 Pos=-32 [Rhodococcus sp. RHA1]
ACCGACCGAACGTACGGTGAAA
>RHA1_ro02864(paaZ) Score=5.6 Pos=-128 [Rhodococcus sp. RHA1]
AATAACCGAATCTTCGGTCGGT
>RHA1_ro02863(paaJ) Score=5.1 Pos=-149 [Rhodococcus sp. RHA1]
TTTCACCGTACGTTCGGTCGGT
>RHA1_ro02863(paaJ) Score=5.3 Pos=-53 [Rhodococcus sp. RHA1]
ACCGACCGAAGATTCGGTTATT
>RHA1_ro02859(paaA) Score=5 Pos=-34 [Rhodococcus sp. RHA1]
ACCAACCGATCATTCGGTAATA
>RHA1_ro02082(paaT) Score=5.5 Pos=-124 [Rhodococcus sp. RHA1]
ACCAACCGAACGTACGGTTATA
>RHA1_ro02082(paaT) Score=4.8 Pos=-40 [Rhodococcus sp. RHA1]
CCTGACCGAACAGTCGTTCGCA
# TF - Zur: RHA1_ro01222
>RHA1_ro02545(znuC4) Score=5.1 Pos=-8 [Rhodococcus sp. RHA1]
TAACGATAATGATTGTCGTAA
>RHA1_ro05617(rpmB2) Score=5.4 Pos=-63 [Rhodococcus sp. RHA1]
TGTCGAAAATGATTGTCATCA
>RHA1_ro05617(rpmB2) Score=5.4 Pos=-117 [Rhodococcus sp. RHA1]
TTTCGATAACGATTGTCATTA
>RHA1_ro05618 Score=5.4 Pos=-29 [Rhodococcus sp. RHA1]
TAATGACAATCGTTATCGAAA
>RHA1_ro05618 Score=5.4 Pos=-83 [Rhodococcus sp. RHA1]
TGATGACAATCATTTTCGACA
>RHA1_ro02546(znuB2) Score=5.1 Pos=-31 [Rhodococcus sp. RHA1]
TTACGACAATCATTATCGTTA
>RHA1_ro02549(SCO0472) Score=4.9 Pos=-47 [Rhodococcus sp. RHA1]
CTTTGACAACCGTTTGCAATA
>RHA1_ro05533(yciC3) Score=5.8 Pos=-25 [Rhodococcus sp. RHA1]
TAATGAAAACAGTTATCATTT
>RHA1_ro04479(znuA) Score=4.8 Pos=-55 [Rhodococcus sp. RHA1]
CAACGGTAACGGTTTCCAATA
# TF - NrdR: RHA1_ro06790
>RHA1_ro06439(nrdH) Score=4.2 Pos=-188 [Rhodococcus sp. RHA1]
TCACAACATCTCGGGT
>RHA1_ro06439(nrdH) Score=4.9 Pos=-156 [Rhodococcus sp. RHA1]
CCACTAGGTGTAGTGT
# TF - AnsR: RHA1_ro04454
>RHA1_ro04454(ansR) Score=5.9 Pos=40 [Rhodococcus sp. RHA1]
ACCTGTCAGACAGCT
>RHA1_ro04454(ansR) Score=5.7 Pos=-67 [Rhodococcus sp. RHA1]
GGCTGTCAGACAGGT
>RHA1_ro04453(aspA) Score=5.9 Pos=-239 [Rhodococcus sp. RHA1]
AGCTGTCTGACAGGT
>RHA1_ro04453(aspA) Score=5.7 Pos=-132 [Rhodococcus sp. RHA1]
ACCTGTCTGACAGCC
# TF - Mce2R: RHA1_ro01046
>RHA1_ro01046(mce2R) Score=5.8 Pos=-48 [Rhodococcus sp. RHA1]
TGCACTGGTAAGACCACTTGA
# TF - RER_29210: RHA1_ro06890
>RHA1_ro06890(RER_29210) Score=5.2 Pos=-21 [Rhodococcus sp. RHA1]
TTGTTTGCATAGAATGCAAACAT
# TF - PdxR3: RHA1_ro05556, RHA1_ro06371
>RHA1_ro05556(pdxR3) Score=3.8 Pos=-236 [Rhodococcus sp. RHA1]
AGGCCAGTGCGGATCTTCTGGACT
>RHA1_ro05556(pdxR3) Score=3.9 Pos=-26 [Rhodococcus sp. RHA1]
TAGCCAAGAGGTTGATACTGGACT
>RHA1_ro06371(pdxR3) Score=3.5 Pos=-26 [Rhodococcus sp. RHA1]
CAGTCCTCTGTGGAAAAGTGGCCT
>RHA1_ro06449(COG2364) Score=3.9 Pos=-6 [Rhodococcus sp. RHA1]
GGTCCAGTGCCTGCGTGGTGGCTA
>RHA1_ro06449(COG2364) Score=3.7 Pos=-78 [Rhodococcus sp. RHA1]
ACGCCGGTTTCACCGAGGTGGCTC
# TF - RhaR: RHA1_ro04084
>RHA1_ro04085(rhaG) Score=5.8 Pos=-218 [Rhodococcus sp. RHA1]
CTCTTGAATCGCTTCAGTCC
>RHA1_ro04085(rhaG) Score=6.1 Pos=-30 [Rhodococcus sp. RHA1]
GAAATGAACCGTTTCAATCG
>RHA1_ro04084(rhaR) Score=6.1 Pos=-282 [Rhodococcus sp. RHA1]
CGATTGAAACGGTTCATTTC
>RHA1_ro04084(rhaR) Score=5.8 Pos=-94 [Rhodococcus sp. RHA1]
GGACTGAAGCGATTCAAGAG
# TF - Nfa20840: RHA1_ro03016, RHA1_ro03856
>RHA1_ro03015(Arth_3542-3) Score=4.7 Pos=-42 [Rhodococcus sp. RHA1]
CAATATGTATACACCACA
>RHA1_ro03017(Arth_3540-2) Score=5.6 Pos=-106 [Rhodococcus sp. RHA1]
CGTCTTGTATACAGCAAG
>RHA1_ro03015(Arth_3542-3) Score=4.3 Pos=-53 [Rhodococcus sp. RHA1]
TTTCCTGCATACAATATG
>RHA1_ro03016(Nfa20840) Score=4.3 Pos=-8 [Rhodococcus sp. RHA1]
CATATTGTATGCAGGAAA
>RHA1_ro03016(Nfa20840) Score=4.7 Pos=-19 [Rhodococcus sp. RHA1]
TGTGGTGTATACATATTG
>RHA1_ro03857(Arth_3540) Score=5.1 Pos=-204 [Rhodococcus sp. RHA1]
CCGGTCGTATACAACTGG
>RHA1_ro03018(Arth_3539) Score=5.6 Pos=-114 [Rhodococcus sp. RHA1]
CTTGCTGTATACAAGACG
# TF - ROP_32700: RHA1_ro03477
>RHA1_ro03476(COG2814) Score=3.6 Pos=-111 [Rhodococcus sp. RHA1]
CCATGTTAAACGATC
>RHA1_ro03477(ROP_32700) Score=3.6 Pos=-79 [Rhodococcus sp. RHA1]
GATCGTTTAACATGG
>RHA1_ro03477(ROP_32700) Score=5.5 Pos=-111 [Rhodococcus sp. RHA1]
AATCGTTCAACGATC
>RHA1_ro03476(COG2814) Score=5.5 Pos=-79 [Rhodococcus sp. RHA1]
GATCGTTGAACGATT
# TF - LldR: RHA1_ro03478
>RHA1_ro03478(lldR) Score=6.2 Pos=-56 [Rhodococcus sp. RHA1]
TGTGGTCTGACCACA
>RHA1_ro03478(lldR) Score=6.2 Pos=-32 [Rhodococcus sp. RHA1]
TGTGGTCAGACCACA
>RHA1_ro03479(lldE) Score=6.2 Pos=25 [Rhodococcus sp. RHA1]
TGTGGTCTGACCACA
>RHA1_ro03479(lldE) Score=6.2 Pos=49 [Rhodococcus sp. RHA1]
TGTGGTCAGACCACA
# TF - PhnF: RHA1_ro06603
>RHA1_ro06603(phnF) Score=6 Pos=7 [Rhodococcus sp. RHA1]
ATTGGTATAGACCATT
>RHA1_ro06603(phnF) Score=5.7 Pos=-40 [Rhodococcus sp. RHA1]
TTTGGTCTAGACCAGT
>RHA1_ro06602(phnS) Score=6 Pos=-108 [Rhodococcus sp. RHA1]
AATGGTCTATACCAAT
>RHA1_ro06602(phnS) Score=5.7 Pos=-61 [Rhodococcus sp. RHA1]
ACTGGTCTAGACCAAA
# TF - IolR: RHA1_ro01349
>RHA1_ro01349(iolR) Score=3.3 Pos=-122 [Rhodococcus sp. RHA1]
CTCCTGTCAAGACTTTGT
>RHA1_ro01349(iolR) Score=5.2 Pos=-111 [Rhodococcus sp. RHA1]
ACTTTGTCCTGACATTAT
>RHA1_ro03822(iolG3) Score=4.9 Pos=-89 [Rhodococcus sp. RHA1]
ACTTTGTCAGCACAAACG
>RHA1_ro01347(iolTA) Score=5.1 Pos=-105 [Rhodococcus sp. RHA1]
CTAATGTCCAGACAAACT
>RHA1_ro00218(oxiA) Score=4.3 Pos=-26 [Rhodococcus sp. RHA1]
CGAATGTCTTAACATATA
>RHA1_ro03889(iolT) Score=4.7 Pos=-61 [Rhodococcus sp. RHA1]
GCTTTGTTCGGACATAAA
>RHA1_ro01350(iolC) Score=5.2 Pos=-37 [Rhodococcus sp. RHA1]
ATAATGTCAGGACAAAGT
>RHA1_ro01350(iolC) Score=3.3 Pos=-26 [Rhodococcus sp. RHA1]
ACAAAGTCTTGACAGGAG
# TF - TauR: RHA1_ro03548
>RHA1_ro03589(gabP) Score=8.8 Pos=-207 [Rhodococcus sp. RHA1]
CTGGTCCTCA--------------CTGGCACTGT
>RHA1_ro03588(gabP) Score=9.2 Pos=-63 [Rhodococcus sp. RHA1]
CTGGACCCAT--------------CTGGCTCTGG
>RHA1_ro03546(tpa) Score=9.2 Pos=-96 [Rhodococcus sp. RHA1]
CTGGACCCAT--------------CTGGCCCTGA
>RHA1_ro03547(ald) Score=8.9 Pos=-129 [Rhodococcus sp. RHA1]
CTGGTCCCCG--------------CTGGTCCTTC
>RHA1_ro03594(thiG) Score=8 Pos=-95 [Rhodococcus sp. RHA1]
CTGGACCTAT--------------GTGGTTCTGA
# TF - HrcA: RHA1_ro01247
>RHA1_ro06189(groS) Score=7 Pos=-150 [Rhodococcus sp. RHA1]
TTGGCACTCTCACGTATAGAGTGCCAA
>RHA1_ro02146(groL2) Score=7 Pos=-165 [Rhodococcus sp. RHA1]
TTGGCACTCACGACGCGTGAGTGCCAG
>RHA1_ro02146(groL2) Score=6.2 Pos=-200 [Rhodococcus sp. RHA1]
CTTGCACTCACCCTGTCCGAGTGCTAA
>RHA1_ro05630(COG2331) Score=6.9 Pos=-64 [Rhodococcus sp. RHA1]
TTGGCACTGTCGACTGTAGAGTGCTAA
>RHA1_ro06632(hsp18) Score=6.8 Pos=-101 [Rhodococcus sp. RHA1]
CTGGCACTCTCGGGTGCCGAGTGCTAA
# TF - LexA: RHA1_ro06788, RHA1_ro00572
>RHA1_ro04932(alkB) Score=4.8 Pos=-36 [Rhodococcus sp. RHA1]
GTGAACATACGTTCGA
>RHA1_ro06788(lexA) Score=5.2 Pos=-192 [Rhodococcus sp. RHA1]
TCGATCACGCGTTCGA
>RHA1_ro06788(lexA) Score=5.1 Pos=-176 [Rhodococcus sp. RHA1]
AAGAACACATGTTCGA
>RHA1_ro06788(lexA) Score=5.6 Pos=-113 [Rhodococcus sp. RHA1]
TCGAACAGATGTTTGA
>RHA1_ro06227(dnaE2) Score=5.3 Pos=-89 [Rhodococcus sp. RHA1]
TCGAACTCCCGTTCGA
>RHA1_ro06892(ruvC) Score=5.6 Pos=-36 [Rhodococcus sp. RHA1]
TCGAACAGCTGTTCGG
>RHA1_ro06212(nfa9050) Score=5.1 Pos=-64 [Rhodococcus sp. RHA1]
TCGAAAATACGTTCGA
>RHA1_ro01383(dinB) Score=5.3 Pos=-8 [Rhodococcus sp. RHA1]
GCGAACATATGTTCGT
>RHA1_ro06765(recA) Score=5 Pos=-111 [Rhodococcus sp. RHA1]
TCGAACACACGTTCCC
# TF - ArgR: RHA1_ro00951
>RHA1_ro00956(argC) Score=6 Pos=-27 [Rhodococcus sp. RHA1]
CTTGCATGATGATGCATA
# TF - HutC: RHA1_ro04645
>RHA1_ro04643(COG1457) Score=4.7 Pos=-136 [Rhodococcus sp. RHA1]
GGGGTTGTCTATACAGGACT
>RHA1_ro04644(gdh) Score=4.7 Pos=-90 [Rhodococcus sp. RHA1]
AGTCCTGTATAGACAACCCC
# TF - PdxR2: RHA1_ro01235
>RHA1_ro01234(pdxO) Score=10.7 Pos=-66 [Rhodococcus sp. RHA1]
ACTGGTCTGT-(13)-TGTGGATCTG-(4)-ATGATCCACA
# TF - Nfa21130: RHA1_ro05072
>RHA1_ro05073(pcaC) Score=9.5 Pos=-27 [Rhodococcus sp. RHA1]
GAATTGGCCCAA------------GAATTGAACCAT
# TF - RHA1_ro08093: RHA1_ro08093
>RHA1_ro08097 Score=13.7 Pos=-83 [Rhodococcus sp. RHA1]
ACCGGTACC-(15)-ATTGGATCT-(2)-TGGACCGCT
>RHA1_ro08092 Score=13.7 Pos=-99 [Rhodococcus sp. RHA1]
ATCGGTACC-(15)-ATTGGATCT-(2)-TGAACCGCT
# TF - DasR: RHA1_ro01553
>RHA1_ro01551(nagE_B) Score=5.9 Pos=-31 [Rhodococcus sp. RHA1]
TCCGGTCATAACCAGT
>RHA1_ro01550(nagE) Score=5.9 Pos=-176 [Rhodococcus sp. RHA1]
ACTGGTTATGACCGGA
# TF - Zur: RHA1_ro01222
>RHA1_ro05618(yciC) Score=5.8 Pos=-83 [Rhodococcus sp. RHA1]
TGATGACAATCATTTTCGACA
>RHA1_ro05618(yciC) Score=5.7 Pos=-29 [Rhodococcus sp. RHA1]
TAATGACAATCGTTATCGAAA
>RHA1_ro05617(rpmB2) Score=5.7 Pos=-117 [Rhodococcus sp. RHA1]
TTTCGATAACGATTGTCATTA
>RHA1_ro05617(rpmB2) Score=5.8 Pos=-63 [Rhodococcus sp. RHA1]
TGTCGAAAATGATTGTCATCA
>RHA1_ro02546(znuB2) Score=5.7 Pos=-31 [Rhodococcus sp. RHA1]
TTACGACAATCATTATCGTTA
>RHA1_ro02549(nfa23280) Score=4.7 Pos=-47 [Rhodococcus sp. RHA1]
CTTTGACAACCGTTTGCAATA
>RHA1_ro05533(yciC3) Score=5.2 Pos=-25 [Rhodococcus sp. RHA1]
TAATGAAAACAGTTATCATTT
>RHA1_ro04479(znuA) Score=5 Pos=-55 [Rhodococcus sp. RHA1]
CAACGGTAACGGTTTCCAATA
>RHA1_ro02545(znuC2) Score=5.7 Pos=-8 [Rhodococcus sp. RHA1]
TAACGATAATGATTGTCGTAA
# TF - LtbR  : RHA1_ro06498
>RHA1_ro06498(ltbR) Score=5.7 Pos=-24 [Rhodococcus sp. RHA1]
TATGCGAGAAAGTGGTATC
>RHA1_ro06499(leuC) Score=5.7 Pos=-52 [Rhodococcus sp. RHA1]
GATACCACTTTCTCGCATA
# TF - AmtR: RHA1_ro06918
>RHA1_ro06918(amtR) Score=7 Pos=-170 [Rhodococcus sp. RHA1]
AATATCTGTCGCTCGATAGTTTTC
# TF - PaaR: RHA1_ro02633
>RHA1_ro02082(paaT) Score=5.7 Pos=-124 [Rhodococcus sp. RHA1]
ACCAACCGAACGTACGGTTATA
>RHA1_ro02082(paaT) Score=5.1 Pos=-40 [Rhodococcus sp. RHA1]
CCTGACCGAACAGTCGTTCGCA
>RHA1_ro02633(paaR) Score=5.2 Pos=-80 [Rhodococcus sp. RHA1]
TTCAACCGAACCTTCGGTCGGC
>RHA1_ro02864(paaZ) Score=5.7 Pos=-128 [Rhodococcus sp. RHA1]
AATAACCGAATCTTCGGTCGGT
>RHA1_ro02864(paaZ) Score=5.4 Pos=-32 [Rhodococcus sp. RHA1]
ACCGACCGAACGTACGGTGAAA
>RHA1_ro02863(paaJ) Score=5.4 Pos=-149 [Rhodococcus sp. RHA1]
TTTCACCGTACGTTCGGTCGGT
>RHA1_ro02863(paaJ) Score=5.7 Pos=-53 [Rhodococcus sp. RHA1]
ACCGACCGAAGATTCGGTTATT
>RHA1_ro02859(paaA) Score=5.6 Pos=-34 [Rhodococcus sp. RHA1]
ACCAACCGATCATTCGGTAATA
# TF - CsoR: RHA1_ro03538, RHA1_ro11208
>RHA1_ro03535(copZ) Score=5.3 Pos=-63 [Rhodococcus sp. RHA1]
ATACGGTAGGGGGGTAT
# TF - AcnR: RHA1_ro07206
>RHA1_ro06238(icd) Score=5.2 Pos=-146 [Rhodococcus sp. RHA1]
CAGTACGCTTGTCTTG
>RHA1_ro07207(acnA) Score=5.8 Pos=-158 [Rhodococcus sp. RHA1]
CAGGACAAGCGTACTG
# TF - ArsR: RHA1_ro03367
>RHA1_ro03367(arsR) Score=7.1 Pos=-13 [Rhodococcus sp. RHA1]
TCAATATCGACGCATGTCGA
# TF - QorR: RHA1_ro02138
>RHA1_ro02138(qorR) Score=6.6 Pos=-66 [Rhodococcus sp. RHA1]
GCACTAATTTTTCGTAAGTGC
>RHA1_ro02137(qorB) Score=6.6 Pos=-79 [Rhodococcus sp. RHA1]
GCACTTACGAAAAATTAGTGC
# TF - Rex: RHA1_ro02054
>RHA1_ro06201(choD) Score=5.9 Pos=-71 [Rhodococcus sp. RHA1]
TTGTGGCAGCTGTCACAA
>RHA1_ro02071(fadD) Score=5.2 Pos=-95 [Rhodococcus sp. RHA1]
TTGTGACTGTTGTCACAG
>RHA1_ro02831(dhaS) Score=5.4 Pos=-40 [Rhodococcus sp. RHA1]
TTGTGACAGCCATCACAA
>RHA1_ro06345(whiB) Score=6.3 Pos=-103 [Rhodococcus sp. RHA1]
TCGTGAAAGCATTCACAA
>RHA1_ro01583(pntAa) Score=4.9 Pos=-215 [Rhodococcus sp. RHA1]
CTGTGACCGGGTTCACAA
>RHA1_ro05230(coxM) Score=4.4 Pos=-17 [Rhodococcus sp. RHA1]
TTGTGAGGTAGGTCACAA
>RHA1_ro05909(nuoA) Score=3.9 Pos=-88 [Rhodococcus sp. RHA1]
CTGTGGCATAACTCACAA
>RHA1_ro02054(rex) Score=5.8 Pos=22 [Rhodococcus sp. RHA1]
TTGTGCATGGGTTCACAA
# TF - BioQ: RHA1_ro01044
>RHA1_ro01054(bioF) Score=6.1 Pos=-26 [Rhodococcus sp. RHA1]
GTTGAACACCGTTCAAG
>RHA1_ro01055(bioA) Score=6.1 Pos=-59 [Rhodococcus sp. RHA1]
CTTGAACGGTGTTCAAC
>RHA1_ro01043(bioB) Score=5.9 Pos=-1 [Rhodococcus sp. RHA1]
CGTGAACACCGTTCAAC
>RHA1_ro01043(bioB) Score=5.1 Pos=15 [Rhodococcus sp. RHA1]
CTTGTACGGTGTTCAAT
>RHA1_ro01044(bioQ) Score=5.5 Pos=-24 [Rhodococcus sp. RHA1]
ATTGAACACCGTACAAG
>RHA1_ro01044(bioQ) Score=5.8 Pos=-8 [Rhodococcus sp. RHA1]
GTTGAACGGTGTTCACG
>RHA1_ro05255(bioY) Score=5.7 Pos=-38 [Rhodococcus sp. RHA1]
CTTGAACGTCGTTCAAG
# TF - MntR: RHA1_ro06652
>RHA1_ro07271(mntC) Score=5.5 Pos=-60 [Rhodococcus sp. RHA1]
TGGTTTCGGCAAGCCGAACATT
>RHA1_ro05067(mntH) Score=5.2 Pos=-77 [Rhodococcus sp. RHA1]
AAAGTTCGCCATACCTAAATCT
>RHA1_ro04009(sodA) Score=5.8 Pos=-189 [Rhodococcus sp. RHA1]
TTTTTTCGGGTGCCCGAACTTT