# TF - ZntR: SO0443
>SO_0443(zntR) Score=7 Pos=-94 [Shewanella oneidensis MR-1]
ACCTTGGAGTAGGCTCCAAGGT
# TF - TyrR: SO_1669
>SO_2389(emrD) Score=4.5 Pos=-152 [Shewanella oneidensis MR-1]
ATGTAAGCTTAATTTTACAG
>SO_4699(prlC) Score=4.3 Pos=-147 [Shewanella oneidensis MR-1]
GTGTAAATCCTAATTGAGAA
>SO_4414(tdo) Score=4.5 Pos=-175 [Shewanella oneidensis MR-1]
GTGTAAATAAAAAGTGGCAT
>SO_2404(aroA) Score=3.6 Pos=-80 [Shewanella oneidensis MR-1]
ATGTAGTGTGAAGTTGCCAT
>SO_2404(aroA) Score=3.8 Pos=-101 [Shewanella oneidensis MR-1]
TAGTAACGTAAACTTGACGT
>SO_0949(brnQ) Score=5 Pos=-121 [Shewanella oneidensis MR-1]
GTGTAAACATAGGTTTGCAC
>SO_1670(hmgC) Score=4.3 Pos=-239 [Shewanella oneidensis MR-1]
ACGTAATGATTAGTTTACAG
>SO_1670(hmgC) Score=3.8 Pos=-323 [Shewanella oneidensis MR-1]
ATGTAACAGTATCGTTCCAC
>SO_1898(liuR) Score=4.6 Pos=-105 [Shewanella oneidensis MR-1]
GTGGCAACAAGAATTGACAA
>SO_1669(tyrR) Score=4.7 Pos=-190 [Shewanella oneidensis MR-1]
CTGTAAACTAGGCTTGCCAC
>SO_3774(putA) Score=4.8 Pos=-212 [Shewanella oneidensis MR-1]
TTGTCAATCAAGCGTTACAT
>SO_1812(mdeA) Score=3.9 Pos=-197 [Shewanella oneidensis MR-1]
ATGTAACAACTTAGTTACAG
>SO_3844(pep3) Score=4.2 Pos=-173 [Shewanella oneidensis MR-1]
ATGGTAATTTTTAGTTACAA
>SO_2339(bkdA1) Score=4.9 Pos=-160 [Shewanella oneidensis MR-1]
TTGTAAAGCAATATATACAT
>SO_2638(ldh) Score=5.2 Pos=-154 [Shewanella oneidensis MR-1]
GTGGAAAGCTAGATTGCCAC
>SO_1677(ivdA) Score=4.4 Pos=-159 [Shewanella oneidensis MR-1]
CTGTAAATCCTGACTGACAA
>SO_1483(aceB) Score=3.7 Pos=-372 [Shewanella oneidensis MR-1]
GTGTAATCATTGTTTTTCGA
>SO_1666(phhA) Score=4.4 Pos=-122 [Shewanella oneidensis MR-1]
TTGTAATATTTGCTTTACGT
>SO2406(tyrB) Score=3.5 Pos=-155 [Shewanella oneidensis MR-1]
TCGGCAGGCTTTTTTGCCAG
# TF - TrpR: SO3419
>SO1361(aroF) Score=6.4 Pos=-119 [Shewanella oneidensis MR-1]
TGTAATGGTGTATCATTACG
>SO3419(trpR) Score=5.9 Pos=-32 [Shewanella oneidensis MR-1]
TGTAATGCTTAAACAATACT
# TF - SO4705: SO_4705
>SO_4706(SO4706) Score=7.4 Pos=-174 [Shewanella oneidensis MR-1]
TTGTAGTAAAAAATACACTAGACTACAA
>SO_4705(SO4705) Score=7.4 Pos=-86 [Shewanella oneidensis MR-1]
TTGTAGTCTAGTGTATTTTTTACTACAA
# TF - SO4468: SO_4468
>SO_4468(SO4468) Score=5.6 Pos=-38 [Shewanella oneidensis MR-1]
CTAGACGACTGGTCTAATTT
>SO_4469(SO4469) Score=6 Pos=-52 [Shewanella oneidensis MR-1]
CTAGACGACTGGTCTACTAA
# TF - SO4326: SO_4326
>SO_4326(vexR) Score=7.6 Pos=0 [Shewanella oneidensis MR-1]
ATGAATGAACGTTCATTCAT
# TF - SO3627: SO_3627
>SO_3627(SO3627) Score=6.9 Pos=-99 [Shewanella oneidensis MR-1]
TTTTTGAGTTGTATCTCAAGAA
>SO_3624(SO3624) Score=6.9 Pos=-1477 [Shewanella oneidensis MR-1]
TTCTTGAGaTACAaCTCAAAAA
# TF - SO3494: SO_3494
>SO_3494(SO3494) Score=6.2 Pos=-273 [Shewanella oneidensis MR-1]
TAAATACCGATTGGTAAAAA
>SO_3493(mexE) Score=6.2 Pos=99 [Shewanella oneidensis MR-1]
TTTtTACCAATCGGTATttA
# TF - SO3393: SO_3393
>SO_3392(SO3392) Score=7 Pos=-34 [Shewanella oneidensis MR-1]
TCTTGAACGTACATTCAAGA
>SO_3392(SO3392) Score=5.5 Pos=-85 [Shewanella oneidensis MR-1]
TATTGAACAAACATTCAAAA
>SO_3392(SO3392) Score=5.8 Pos=-61 [Shewanella oneidensis MR-1]
TCTTGAATGATCATTCAAAT
>SO_3393(SO3393) Score=5.5 Pos=-64 [Shewanella oneidensis MR-1]
TTTTGAATGTTTGTTCAATA
>SO_3393(SO3393) Score=5.8 Pos=-88 [Shewanella oneidensis MR-1]
ATTTGAATGATCATTCAAGA
>SO_3393(SO3393) Score=7 Pos=-115 [Shewanella oneidensis MR-1]
TCTTGAATGTACGTTCAAGA
# TF - PhrR: SO3385
>SO3386(COG3272) Score=6.6 Pos=-70 [Shewanella oneidensis MR-1]
TGTACAAAAACTTGATCCTTGTACA
>SO3386(COG3272) Score=4.8 Pos=-18 [Shewanella oneidensis MR-1]
GATACAAGGAATCTCATTATGTACA
>SO3420(SO3420) Score=6.5 Pos=-70 [Shewanella oneidensis MR-1]
AGTACATTAAGTTAATTTGTGTACA
# TF - SO3277: SO3277
>SO_3277(SO3277) Score=6.1 Pos=-122 [Shewanella oneidensis MR-1]
ACTGGACTGTCTAGTCCATT
>SO_3277(SO3277) Score=6.5 Pos=-150 [Shewanella oneidensis MR-1]
ACTAGACTTGCTAGTCTAGT
>SO_3278(SO3278) Score=6.5 Pos=-60 [Shewanella oneidensis MR-1]
ACTAGACTAGCAAGTCTAGT
>SO_3278(SO3278) Score=6.1 Pos=-88 [Shewanella oneidensis MR-1]
AATGGACTAGACAGTCCAGT
# TF - SO1758: SO1758
>SO_1756(SO1756) Score=6.8 Pos=-104 [Shewanella oneidensis MR-1]
ACTGACATGATGCTGTCAGT
# TF - SO1703: SO_1703
>SO_1703(SO1703) Score=6.5 Pos=-35 [Shewanella oneidensis MR-1]
TATTCATCAGTAGATGAATT
# TF - SO1578: SO1578
>SO_1578(SO1578) Score=6.6 Pos=-112 [Shewanella oneidensis MR-1]
TTAACGGAACGATCGGTTAG
>SO_1577(SO1577) Score=6.6 Pos=-63 [Shewanella oneidensis MR-1]
CTAACCGATCGTTCCGTTAA
# TF - SO1415: SO_1415
>SO_1410(SO1410) Score=5.8 Pos=-163 [Shewanella oneidensis MR-1]
ATTCGCGAGTAAAGTCACGAAT
>SO_1415(SO1415) Score=6.7 Pos=-238 [Shewanella oneidensis MR-1]
ATTCGTGAGACGTCTCTTGAAT
>SO_1414(SO1414) Score=6.7 Pos=-117 [Shewanella oneidensis MR-1]
ATTCAAGAGACGTCTCACGAAT
# TF - SO1393: SO_1393
>SO_1392(SO1392) Score=6.6 Pos=-203 [Shewanella oneidensis MR-1]
AGTAGACAAATCAGTCTACT
>SO_1392(SO1392) Score=5.1 Pos=-165 [Shewanella oneidensis MR-1]
TACAGACAAATCTGTCTACT
>SO_1393(SO1393) Score=6.6 Pos=-91 [Shewanella oneidensis MR-1]
AGTAGACTGATTTGTCTACT
>SO_1393(SO1393) Score=5.1 Pos=-129 [Shewanella oneidensis MR-1]
AGTAGACAGATTTGTCTGTA
# TF - SO0734: SO_0734
>SO_0734(SO0734) Score=10.4 Pos=-74 [Shewanella oneidensis MR-1]
TTACTGTGTG-----------TTGCTGTGTG
# TF - SO0193: SO_0193
>SO_0193(SO0193) Score=6.2 Pos=-66 [Shewanella oneidensis MR-1]
ATTTTGAACGTTGTTTTTTAT
# TF - NmlR: SO0082
>SO_0083(pcaC) Score=6.8 Pos=-60 [Shewanella oneidensis MR-1]
CTTAGAGCTAACTCTAAG
# TF - SO0072: SO_0072
>SO_0072(SO0072) Score=7.1 Pos=-34 [Shewanella oneidensis MR-1]
TGTATCAATGTATTAATACA
>SO0071(PF00561) Score=7.1 Pos=-78 [Shewanella oneidensis MR-1]
TGTATTAATACATTGATACA
# TF - SdaR: SO1774
>SO1771(grtP) Score=6.5 Pos=-197 [Shewanella oneidensis MR-1]
TTTTGTGCTCATGCACAAAA
# TF - PUR
>SO_0779(gcvT) Score=5.6 Pos=-228 [Shewanella oneidensis MR-1]
TATAATTTCGCCGCATTTTA
>SO_3554(purE) Score=4.8 Pos=-113 [Shewanella oneidensis MR-1]
TATTATTCTGCGCCATGATG
>SO_2760(purM) Score=5.6 Pos=-31 [Shewanella oneidensis MR-1]
TAGAATACGGCCGCATAAAA
>SO_3293(guaB) Score=4.5 Pos=-59 [Shewanella oneidensis MR-1]
TATAATCCCGCCGCAATATT
# TF - PsrA: SO_2493
>SO_3089(fadI) Score=5.4 Pos=-163 [Shewanella oneidensis MR-1]
AAACAAACAGGTGTTTAAAA
>SO_2419(fadH) Score=5.4 Pos=-18 [Shewanella oneidensis MR-1]
TTTAAAAAGGATGTTTGAAT
>SO_2493(psrA) Score=5.9 Pos=40 [Shewanella oneidensis MR-1]
ATTTAAACGAGTGTTTTAAA
>SO_2419(fadH) Score=5 Pos=-31 [Shewanella oneidensis MR-1]
TTTAAATCACTTGTTTAAAA
>SO_2935(SO2935) Score=4.5 Pos=-73 [Shewanella oneidensis MR-1]
TTTGAAACATGCGTTTAGCA
>SO_2935(SO2935) Score=4.5 Pos=-86 [Shewanella oneidensis MR-1]
TTTCATTCATTTGTTTGAAA
>SO_0881(SO0881) Score=5.9 Pos=-78 [Shewanella oneidensis MR-1]
ATTAAAACGTGTGTTTAATT
>SO_3145(etfB) Score=5.4 Pos=-121 [Shewanella oneidensis MR-1]
ATGCAAACAGGCGTTTGACT
>SO_4453(etfD) Score=5.4 Pos=-70 [Shewanella oneidensis MR-1]
AATAAAACGCCCGTTTACAA
>SO_1927(sdhC) Score=5.7 Pos=-331 [Shewanella oneidensis MR-1]
ATTTAAATAAGCGTTTAAAT
>SO_3908(echH) Score=6.1 Pos=-80 [Shewanella oneidensis MR-1]
AATTAAACATCTGTTTGAAT
>SO_2395(acdH) Score=6.1 Pos=-41 [Shewanella oneidensis MR-1]
ATTAAAACAACTGTTTTAAT
>SO_1483(aceB) Score=5.6 Pos=-507 [Shewanella oneidensis MR-1]
AATGAAACGTATGTTTGAAT
>SO_1926(gltA) Score=5.7 Pos=-105 [Shewanella oneidensis MR-1]
ATTTAAACGCTTATTTAAAT
>SO_2536(fadE2) Score=5.9 Pos=-157 [Shewanella oneidensis MR-1]
ATTTAAACAATTGTTTGAAA
>SO_2581(fadD1) Score=5.5 Pos=-136 [Shewanella oneidensis MR-1]
ATTAAAACGCCCGTATGATT
>SO_3664(fadD2) Score=5.6 Pos=-63 [Shewanella oneidensis MR-1]
ATCTAAACACCCGTTTGATT
>SO_0021(fadB) Score=6.1 Pos=-162 [Shewanella oneidensis MR-1]
AATTAAACAGTCGTTTAAAT
# TF - PrpR: SO0346
>SO0346(prpR) Score=5.9 Pos=-86 [Shewanella oneidensis MR-1]
ATTGTCGACAAT
>SO0346(prpR) Score=5.9 Pos=-256 [Shewanella oneidensis MR-1]
ATTGTCGACAAT
>SO0346(prpR) Score=5.2 Pos=-125 [Shewanella oneidensis MR-1]
ATTGTTGACAAT
# TF - PnuR: SO_4298
>SO_4295(SO4295) Score=5.4 Pos=-127 [Shewanella oneidensis MR-1]
TAGGAGACAAATGTCCTCTG
# TF - PdhR: SO0423
>SO_0423(pdhR) Score=6.4 Pos=-38 [Shewanella oneidensis MR-1]
AATTGGTAAGACCAATT
>SO_0423(pdhR) Score=4.5 Pos=-175 [Shewanella oneidensis MR-1]
TAATGGTCTGACCCCTT
>SO_2912(pflB) Score=6.4 Pos=-247 [Shewanella oneidensis MR-1]
AATTGGTCTTACCAATT
>SO_1483(aceB) Score=5.7 Pos=-214 [Shewanella oneidensis MR-1]
TGTTGGTCAGACCAATT
>SO_2911(focA) Score=6.4 Pos=-280 [Shewanella oneidensis MR-1]
AATTGGTATGACCAATT
>SO_1483(aceB) Score=4.6 Pos=-306 [Shewanella oneidensis MR-1]
AAGTTGTCTGACAAATT
# TF - NtrC: SO_4472
>SO_0761(glnB) Score=5.5 Pos=-142 [Shewanella oneidensis MR-1]
TGCACAATTCTGGTGCA
>SO_3819(glnK2) Score=5.3 Pos=-181 [Shewanella oneidensis MR-1]
TGCACCAAAATCGCGCA
>SO_4410(glnA) Score=4.6 Pos=-246 [Shewanella oneidensis MR-1]
TGCACTAAAATGGGGGA
>SO_4410(glnA) Score=5.4 Pos=-179 [Shewanella oneidensis MR-1]
TGCACCAACACAGTGCA
>SO_3819(glnK2) Score=4.8 Pos=-168 [Shewanella oneidensis MR-1]
CGCACCAAATCAGGGCA
>SO_4471(ntrB) Score=6 Pos=-52 [Shewanella oneidensis MR-1]
TGCACCAAATCGGTGCA
>SO_4471(ntrB) Score=4.9 Pos=-39 [Shewanella oneidensis MR-1]
TGCAACATAAGGGTGCA
# TF - NsrR: SO0045
>SO_1363(hcp) Score=5.2 Pos=-42 [Shewanella oneidensis MR-1]
ACATGTAAAAATAAAGCATGA
>SO_4302(dnrN) Score=5.6 Pos=-126 [Shewanella oneidensis MR-1]
AGCTGCAAATAATATGCATGT
>SO_2805(nnrS) Score=5.4 Pos=-59 [Shewanella oneidensis MR-1]
ACATTCATTTAATTTGCAGCT
# TF - NrtR: SO_1979
>SO_1980(prs) Score=6.9 Pos=-170 [Shewanella oneidensis MR-1]
ATAGTGTCTAAAAGACACTAT
>SO_1980(prs) Score=6.6 Pos=-84 [Shewanella oneidensis MR-1]
ATAATGTCTTTAAGACACTAT
# TF - NrdR: SO3470
>SO2834(nrdD) Score=4.3 Pos=-79 [Shewanella oneidensis MR-1]
TGCCTACATATTGTGT
>SO2834(nrdD) Score=5.2 Pos=-48 [Shewanella oneidensis MR-1]
TCACTATATGTAGTGT
>SO2415(nrdA) Score=5 Pos=-171 [Shewanella oneidensis MR-1]
ACACCATATCTTGTGT
>SO2415(nrdA) Score=3.7 Pos=-202 [Shewanella oneidensis MR-1]
CCTCACTATCTTGTAT
# TF - NhaR: SO_1338
>SO_2360(ccoH) Score=5.6 Pos=-88 [Shewanella oneidensis MR-1]
CCTCGATAACCTCGAGG
>SO_1336(nhaA) Score=5.6 Pos=-97 [Shewanella oneidensis MR-1]
CCTCGGAATAGCCGAGG
# TF - NagR: SO_3516
>SO_0854(SO0854) Score=5.7 Pos=-83 [Shewanella oneidensis MR-1]
CATGACAACGTTGTCAAA
>SO_3510(mcp_nag) Score=5 Pos=-437 [Shewanella oneidensis MR-1]
ACTGACAGCGTTGTTATA
>SO_3510(mcp_nag) Score=6.4 Pos=-290 [Shewanella oneidensis MR-1]
AATGACAACGCTGTCATC
>SO_3514(omp_nag) Score=6.2 Pos=-74 [Shewanella oneidensis MR-1]
CATGACAGCGTTGTCATT
>SO_1072(cbp) Score=5.6 Pos=-304 [Shewanella oneidensis MR-1]
TTTGACAACGTTGTCTTT
>SO_3503(nagP) Score=6.1 Pos=-175 [Shewanella oneidensis MR-1]
AATGACAGCGTTGTCTTT
>SO_3507(nagK) Score=6.4 Pos=-115 [Shewanella oneidensis MR-1]
AATGACAACGCTGTCATT
# TF - ModE: SO_3862
>SO_3862(modE) Score=5.9 Pos=-178 [Shewanella oneidensis MR-1]
ATCGATATATACCAATCTATATATCGAG
>SO_3863(modA2) Score=5.9 Pos=-73 [Shewanella oneidensis MR-1]
CTCGATATATAGATTGGTATATATCGAT
# TF - MalR: SO_2244
>SO_2458(malT) Score=5.6 Pos=-393 [Shewanella oneidensis MR-1]
gaTGaATACGTATGtAAg
>SO_2162(omp(Mal)) Score=6.1 Pos=-202 [Shewanella oneidensis MR-1]
ATTGAATACGTATGCACA
>SO_2450(susB) Score=5.4 Pos=-90 [Shewanella oneidensis MR-1]
GTGGAATACGTATGCAAG
>SO_2162(omp(Mal)) Score=6.2 Pos=-351 [Shewanella oneidensis MR-1]
CCTGCATACGTATGCAAA
# TF - LldR: SO_3460
>SO_1520(lldE) Score=6.2 Pos=-123 [Shewanella oneidensis MR-1]
TAAATTAGGGCTACTTATTTA
# TF - LiuR: SO_1898
>SO_2638(ldh) Score=6 Pos=-171 [Shewanella oneidensis MR-1]
CCTTACGTTTACGTAAAG
>SO_1325(gltB) Score=5.9 Pos=-188 [Shewanella oneidensis MR-1]
GTTGACGTTAACGTCAAG
>SO_2339(bkdA1) Score=6.2 Pos=-90 [Shewanella oneidensis MR-1]
GTTTACGTTAACGTAATG
>SO_3145(etfB) Score=5.2 Pos=-98 [Shewanella oneidensis MR-1]
ATTGACGTTAACGTTAAC
>SO_1669(tyrR) Score=6 Pos=-122 [Shewanella oneidensis MR-1]
CTTTACGTTTGCGTAAAC
>SO_1677(ivdA) Score=5.9 Pos=-96 [Shewanella oneidensis MR-1]
CTTTACGTTCGCGTAAAC
>SO_1898(liuR) Score=6 Pos=-59 [Shewanella oneidensis MR-1]
CTTTACCTTTACGTAAAC
>SO_3415(thrA) Score=5.7 Pos=-372 [Shewanella oneidensis MR-1]
CATTACGTTTACGTCAAC
>SO_1483(aceB) Score=6 Pos=-524 [Shewanella oneidensis MR-1]
GTTTACGTAAACGTAAAA
# TF - IscR: SO_2263
>SO_2263(iscR) Score=5.5 Pos=-90 [Shewanella oneidensis MR-1]
ATACTTGAGTGATTTACTAGGTTTT
>SO_2263(iscR) Score=6.4 Pos=-65 [Shewanella oneidensis MR-1]
ATACTTGACTGATTTACTCGGGTAT
>SO_4619(nfuA) Score=5 Pos=-46 [Shewanella oneidensis MR-1]
AATTCTTACTAAAACACTCAGGTAT
>SO_0324(ygbA) Score=4.1 Pos=-29 [Shewanella oneidensis MR-1]
TTATCCGAGTCACAGACTAAGGTAT
>SO_4302(dnrN) Score=5.1 Pos=-167 [Shewanella oneidensis MR-1]
AATCTTGACTATTTTAGTCAAGATT
>SO_1304(erpA) Score=5.8 Pos=-88 [Shewanella oneidensis MR-1]
ATACTTGAACAAAATAGTCAGGTAA
# TF - IlvY: SO_4350
>SO_4349(ilvC) Score=5.1 Pos=-147 [Shewanella oneidensis MR-1]
ATTGCAAAAAACGCAAT
>SO_4349(ilvC) Score=4.8 Pos=-116 [Shewanella oneidensis MR-1]
ATATCATTTTAAGCAAC
>SO_4350(ilvY) Score=4.8 Pos=-97 [Shewanella oneidensis MR-1]
GTTGCTTAAAATGATAT
>SO_4350(ilvY) Score=5.1 Pos=-66 [Shewanella oneidensis MR-1]
ATTGCGTTTTTTGCAAT
# TF - HypR: SO2852
>SO3774(putA) Score=5.4 Pos=-92 [Shewanella oneidensis MR-1]
ATTGTATACAAA
# TF - HutC: SO0096
>SO0096(hutC) Score=6.1 Pos=-131 [Shewanella oneidensis MR-1]
TTACTTGTATATACAAGCTA
>SO0095(hutI) Score=6.5 Pos=-95 [Shewanella oneidensis MR-1]
TAGCTTGTATATACAAGTAA
>SO0095(hutI) Score=4.5 Pos=-85 [Shewanella oneidensis MR-1]
ATACAAGTAAATACAAGCTA
>SO0096(hutC) Score=5.6 Pos=-141 [Shewanella oneidensis MR-1]
TAGCTTGTATTTACTTGTAT
# TF - HmgQ: SO1965
>SO1965(hmgQ) Score=5.6 Pos=-79 [Shewanella oneidensis MR-1]
ATCTAAAAAATAGAT
>SO1963(hmgA) Score=5.6 Pos=-154 [Shewanella oneidensis MR-1]
ATCTATTTTTTAGAT
# TF - HexR: SO2490
>SO_4557(mcp1) Score=4.7 Pos=-78 [Shewanella oneidensis MR-1]
CTGTAAATTTTTTACAG
>SO_1218(deoA) Score=4.9 Pos=-85 [Shewanella oneidensis MR-1]
TTGTAATATTGCTACAG
>SO_3546(tal) Score=5.3 Pos=-104 [Shewanella oneidensis MR-1]
TTGTAATTTTTTTACAT
>SO_0779(gcvT) Score=5.1 Pos=-320 [Shewanella oneidensis MR-1]
ATGTAAAAAAATTACAT
>SO_1902(gnd) Score=5 Pos=-82 [Shewanella oneidensis MR-1]
TGGTAATTAAGTTACAA
>SO_1214(nupC) Score=4.4 Pos=-125 [Shewanella oneidensis MR-1]
TTGAAATTAAACTCCAA
>SO_2791(cdd) Score=4.9 Pos=-57 [Shewanella oneidensis MR-1]
CTGTAACAAAATTACTA
>SO_1483(aceB) Score=4.7 Pos=-351 [Shewanella oneidensis MR-1]
TGGTAATTTAATTACGT
>SO_0902(nqrA) Score=5 Pos=-181 [Shewanella oneidensis MR-1]
TTGTTATAAAACTACAT
>SO_3542(phk) Score=5.4 Pos=-73 [Shewanella oneidensis MR-1]
TTGTAAGAAAATTACAA
>SO_2644(ppsA) Score=5.5 Pos=-113 [Shewanella oneidensis MR-1]
TAGTAATAAAATTACAA
>SO_2347(gapB) Score=5 Pos=-182 [Shewanella oneidensis MR-1]
CTCTAATAAAATTACAG
>SO_2490(hexR) Score=5 Pos=-249 [Shewanella oneidensis MR-1]
TTGTAATATAACAACAG
>SO_2345(gapA2) Score=4.6 Pos=-49 [Shewanella oneidensis MR-1]
TGGTAATTTTACTACCA
>SO_2489(zwf) Score=5 Pos=-78 [Shewanella oneidensis MR-1]
CTGTTGTTATATTACAA
>SO_2491(pykA) Score=5 Pos=-76 [Shewanella oneidensis MR-1]
TTGTAACTTTACTACAT
# TF - GlmR: SO_4742
>SO_4742(glmR) Score=6.6 Pos=-33 [Shewanella oneidensis MR-1]
ACCTTTCGAATCGAAAGTT
# TF - GcvA: SO_1533
>SO_4674(kbl) Score=5 Pos=-148 [Shewanella oneidensis MR-1]
ATTAGTTTTTATAAT
>SO_3987(SO3987) Score=5.6 Pos=-109 [Shewanella oneidensis MR-1]
ATTAGTATAACTAAT
>SO_3342(SO3342) Score=5.1 Pos=-99 [Shewanella oneidensis MR-1]
ATTATATATTCTAAT
>SO_2753(SO2753) Score=5.2 Pos=-256 [Shewanella oneidensis MR-1]
ATTAGCTAAACTAAT
>SO_2248(sdaA) Score=4.4 Pos=-199 [Shewanella oneidensis MR-1]
ATCAAAAAAACTAAT
>SO_0779(gcvT) Score=5.5 Pos=-296 [Shewanella oneidensis MR-1]
ATGAGAAAATCTAAT
>SO_1533(gcvA) Score=5.6 Pos=-38 [Shewanella oneidensis MR-1]
ATTAGAAAAACTAAT
# TF - FadR: SO_2885
>SO_3099(fadL) Score=4.8 Pos=-196 [Shewanella oneidensis MR-1]
ATCTGGCCAGACCATTC
>SO_3099(fadL) Score=5.1 Pos=-125 [Shewanella oneidensis MR-1]
ATCTGGTCGGACTTGTT
>SO_3089(fadI) Score=5.2 Pos=-109 [Shewanella oneidensis MR-1]
TAATGGTCAGACCTGTT
>SO_4716(SO4716) Score=5.3 Pos=-92 [Shewanella oneidensis MR-1]
AACTGGCCAGACCTGTT
>SO2885(fadR) Score=3.4 Pos=-54 [Shewanella oneidensis MR-1]
CTCTGGTATGATCAGTG
>SO2536(fadE) Score=4.2 Pos=-94 [Shewanella oneidensis MR-1]
CACAGGTCTGACCACAA
>SO0572(SO0572) Score=4.7 Pos=-29 [Shewanella oneidensis MR-1]
ATCTGGACTGACCAGTA
# TF - FabR: SO_0198
>SO_0197(OLE1) Score=6.3 Pos=-42 [Shewanella oneidensis MR-1]
AGCTTACAGCTGTACGCT
>SO_2447(hylII) Score=6.5 Pos=-114 [Shewanella oneidensis MR-1]
AGCGTACACGTGTAAGCT
>SO_0075(lcfE) Score=4.8 Pos=-121 [Shewanella oneidensis MR-1]
GCGGTACACTTGTAAGCT
>SO_3099(fadL) Score=6.2 Pos=-311 [Shewanella oneidensis MR-1]
GGCGTACAGGTGTACGCT
>SO_0567(plsC) Score=4.9 Pos=-80 [Shewanella oneidensis MR-1]
AGCTTACAGATGTAAACA
>SO_0198(fabR) Score=6.3 Pos=-119 [Shewanella oneidensis MR-1]
AGCGTACAGCTGTAAGCT
>SO_1856(fabA) Score=6.3 Pos=-53 [Shewanella oneidensis MR-1]
AGCTTACACGTGTTCGCT
# TF - DeoR: SO_2717
>SO_2719(deoD) Score=6 Pos=-73 [Shewanella oneidensis MR-1]
TCCGGACTTTAGTCCTAA
# TF - CueR: SO1687
>SO_1689(copA) Score=6.5 Pos=-65 [Shewanella oneidensis MR-1]
ACTCTCCCGTGATGGGAGACT
# TF - CalR: SO_3684
>SO_3683(calB) Score=7.2 Pos=-78 [Shewanella oneidensis MR-1]
AACCGACTAATCAGTCGGTT
# TF - BirA: SO_0214
>SO_2741(bioA) Score=7.8 Pos=-66 [Shewanella oneidensis MR-1]
CTGTCAACG---------------GGTTTACCA
>SO_2740(bioB) Score=7.8 Pos=-89 [Shewanella oneidensis MR-1]
TGGTAAACC---------------CGTTGACAG
# TF - AzrR: SO3584
>SO_3584(azrR) Score=6.5 Pos=-104 [Shewanella oneidensis MR-1]
CTTTATTTAATCTTGTAAAG
>SO_3585(azr) Score=6.5 Pos=-62 [Shewanella oneidensis MR-1]
CTTTACAAGATTAAATAAAG
# TF - ArgR: SO0769
>SO_1044(artI) Score=4 Pos=-76 [Shewanella oneidensis MR-1]
AAAGCATAATTATTGACA
>SO_1044(artI) Score=5.1 Pos=-97 [Shewanella oneidensis MR-1]
AATGAATTTTTAGTCACA
>SO_4347(ilvG) Score=4.2 Pos=-216 [Shewanella oneidensis MR-1]
CGTGATTATTAAATCACA
>SO_2706(astB) Score=3.6 Pos=-142 [Shewanella oneidensis MR-1]
AAGAAATAGTTATGCATT
>SO_2706(astB) Score=4 Pos=-227 [Shewanella oneidensis MR-1]
AGTCACTTTTTAATCAAA
>SO_1270(potF) Score=4.2 Pos=-226 [Shewanella oneidensis MR-1]
TTTGCTTGTTAATGCAAG
>SO_2706(astB) Score=4.1 Pos=-40 [Shewanella oneidensis MR-1]
TTTGAATAAATAATAACC
>SO_1325(gltB) Score=4.3 Pos=-313 [Shewanella oneidensis MR-1]
TTTGCAATAAAAATCACT
>SO_0762(SO0762) Score=4.6 Pos=-195 [Shewanella oneidensis MR-1]
TGTGCCTAAAAATGCACC
>SO_3462(recN) Score=3.7 Pos=-49 [Shewanella oneidensis MR-1]
ACTGTTTATCAATACAGT
>SO_1915(SO1915) Score=4.6 Pos=-63 [Shewanella oneidensis MR-1]
GCTGAATAAATATTAAAA
>SO_1325(gltB) Score=4.5 Pos=-359 [Shewanella oneidensis MR-1]
AAAGAATAACAATTCACT
>SO_3392(SO3392) Score=4.6 Pos=-84 [Shewanella oneidensis MR-1]
ATTGAACAAACATTCAAA
>SO_1952(ggt2) Score=4.7 Pos=-25 [Shewanella oneidensis MR-1]
AATGAAAATAAATTCAGG
>SO_4732(SO4732) Score=4.2 Pos=-106 [Shewanella oneidensis MR-1]
TTTAAATTCACATTCAGT
>SO_0617(astC) Score=4.1 Pos=-307 [Shewanella oneidensis MR-1]
ATTGTGTAGTTATTCATA
>SO_0276(argB) Score=4.9 Pos=-60 [Shewanella oneidensis MR-1]
AGTGCATAAAGATTCACT
>SO_0617(astC) Score=4 Pos=-247 [Shewanella oneidensis MR-1]
TCTGACTAAATATGCTAA
>SO_3462(recN) Score=4.6 Pos=-71 [Shewanella oneidensis MR-1]
ACTGTATATAAAATCAGT
>SO_3392(SO3392) Score=4.6 Pos=-60 [Shewanella oneidensis MR-1]
CTTGAATGATCATTCAAA
>SO_4466(mcp(Arg)) Score=5.5 Pos=-286 [Shewanella oneidensis MR-1]
TGTGAATATATATGCAAT
>SO_2753(SO2753) Score=4.1 Pos=-445 [Shewanella oneidensis MR-1]
AATGCATTTGCAATCAAC
>SO_2753(SO2753) Score=5 Pos=-173 [Shewanella oneidensis MR-1]
AATGCATAAAAATACACT
>SO_0769(argR) Score=5.5 Pos=-93 [Shewanella oneidensis MR-1]
ATTGCATTTTTATTCAGT
>SO_2427(omp(Arg)) Score=3.7 Pos=-204 [Shewanella oneidensis MR-1]
TATGTGTAAGCATTCAAT
>SO_2427(omp(Arg)) Score=4.7 Pos=-383 [Shewanella oneidensis MR-1]
TATGCATATTTTTTCATT
>SO_4245(argA) Score=4.3 Pos=-141 [Shewanella oneidensis MR-1]
TTTGAAAATATAAGCACT
>SO_4245(argA) Score=5.4 Pos=-79 [Shewanella oneidensis MR-1]
GGTGAATTAAAATGCAAT
>SO_1443(SO1443) Score=5.2 Pos=-299 [Shewanella oneidensis MR-1]
TATGCATATTAATTCAGA
>SO_1245(argW) Score=4.8 Pos=-99 [Shewanella oneidensis MR-1]
GTTGAATGAAAATGCAGC
>SO_0275(argC) Score=3.7 Pos=-127 [Shewanella oneidensis MR-1]
AGTGAATAAAATAACAAG
>SO_0275(argC) Score=4 Pos=-249 [Shewanella oneidensis MR-1]
TAAAAATATATATTCACA
>SO_0275(argC) Score=3.6 Pos=-327 [Shewanella oneidensis MR-1]
ATTGAAATATTAAGTAGT
>SO_0314(speF) Score=5.1 Pos=-736 [Shewanella oneidensis MR-1]
TCTGCATTTTTATGCAAA
# TF - MetR: SO0817
>SO2279(ilvI) Score=3.9 Pos=-203 [Shewanella oneidensis MR-1]
TTGAAATGTGTTCTT
>SO2279(ilvI) Score=4.5 Pos=-243 [Shewanella oneidensis MR-1]
ATGAAATTGTCTCAA
>SO2191(metC) Score=4.3 Pos=-110 [Shewanella oneidensis MR-1]
TTGAGGCAAACTCAT
>SO0817(metR) Score=4.3 Pos=-48 [Shewanella oneidensis MR-1]
CCGAATTGATTTCAA
>SO0817(metR) Score=4.4 Pos=-26 [Shewanella oneidensis MR-1]
ATGAGCGAAATTCAC
>SO0818(metE) Score=4.3 Pos=-166 [Shewanella oneidensis MR-1]
TTGAAATCAATTCGG
>SO0818(metE) Score=4.4 Pos=-188 [Shewanella oneidensis MR-1]
GTGAATTTCGCTCAT
>SO1101(luxS) Score=4.8 Pos=-120 [Shewanella oneidensis MR-1]
ATGAGATGATTTCAT
>SO3471(glyA) Score=4.3 Pos=-120 [Shewanella oneidensis MR-1]
TTGAGGTGCATTCAA
# TF - LexA: SO_4603
>SO_3430(recA) Score=5.6 Pos=-127 [Shewanella oneidensis MR-1]
TACTGTATGATTGTACAGTA
>SO_2604(yebG) Score=6 Pos=-31 [Shewanella oneidensis MR-1]
TACTGTATATAAAAACAGTG
>SO_3462(recN) Score=5.8 Pos=-72 [Shewanella oneidensis MR-1]
TACTGTATATAAAATCAGTA
>SO_3462(recN) Score=5.6 Pos=-50 [Shewanella oneidensis MR-1]
TACTGTTTATCAATACAGTG
>SO_3061(topB) Score=5.7 Pos=-32 [Shewanella oneidensis MR-1]
TACTGTAATTATATCCAGTA
>SO_4603(lexA) Score=5.9 Pos=-45 [Shewanella oneidensis MR-1]
TACTGTATATACTAACAGTA
>SO_4603(lexA) Score=5 Pos=-26 [Shewanella oneidensis MR-1]
AACTGTATAGAAAAACAGGA
>SO_1114(dinB) Score=5.9 Pos=-44 [Shewanella oneidensis MR-1]
AACTGTTTTTATATACAGTA
>SO_1819(dinG) Score=5.4 Pos=-43 [Shewanella oneidensis MR-1]
CACTGTTATTATGTACAGCA
>SO_A0013(umuD) Score=5.6 Pos=-32 [Shewanella oneidensis MR-1]
AACTGTATATTTATACAGTT
>SO_4364(recG) Score=4.3 Pos=-45 [Shewanella oneidensis MR-1]
ATATGTATAAATTCACAGTG
>SO_2037(xerD) Score=5.5 Pos=-39 [Shewanella oneidensis MR-1]
TACTGTATAAAATTACAGCG
# RNA - Lysine
>SO_1007(lysW) Score=124.3 Pos=-257 [Shewanella oneidensis MR-1]
CTTTAAGTAGAGGCGCGCTGCCTATGACTACTTGTGCGGAGGGTGATGCCGCAGATGTACAAGGAAAGGAGTCAGCGCCGAAGTAGCCAGGTCATCAAACCGAGCTGCTGGTTTTGCATCAAATAGGTGCAAGACTGCCATAGTCATCCACTATGGAGCGCTACCTGAAGGGG
>SO_3142.3(lysW) Score=108.9 Pos=-277 [Shewanella oneidensis MR-1]
TCTTAGAAGTAGAGACGCACCAAATATCAGTAGTGATCAGTAGGGTGATTCCATTGATCGATCACGAAAGGATTTGGTACCGAAGTGGTTTGATTTATCACGATCAACTGCTGGGGTTGTGCTGAATAGGTACAATACTGCCGTAGTATTTCCTGATATGGATATTCGGAATCGTTACTATGGAGTGCTACTGATAGG
>SO_3986(lysC) Score=84.2 Pos=-319 [Shewanella oneidensis MR-1]
AAGGAACAGAAGAGGAGCGTTAACTAGGTAGTCAATCAGAGGAGCACAAACTCCAGCGATGATTGATGAGGGAGATTAGCGCCGAGGCATAGATGTGGTTGCTGCATGTTTATGTCGGTCGCTTAGGCTGAATCCTAACGATTGTCACCTGTAATTGGTGGAGAGCTTCTGGTGAC
# RNA - FMN
>SO_0142(ribB) Score=43.2 Pos=-239 [Shewanella oneidensis MR-1]
TTTGCCACTAGCGACAGTACTGAGTCCGGATGGAAGAGAATGTAAGACAACACTCGGATAATTGGCATTAACTTTGGCTAAGTATCCAAGCTGTTAGCCTCATATTTTGCAATCACGTTTTTAAGCCTGCGCTTAAAGGGGTCGATTGCTACAGCACAATCCCCTTTGGGGTAATGGCTGTATTTCTGTACGCCC
# RNA - TPP
>SO_2445(thiC) Score=72.9 Pos=-261 [Shewanella oneidensis MR-1]
GGTCATCTTGTCGGAGTGCCTTTTGGCTGAGACCGTTTATTCGGGATCCGTTGAACCTGATCAGGTTAAAACCTGCGAAGGAAACAAGCATAATAACTTC
>SO_2715(omp_thi) Score=67.6 Pos=-164 [Shewanella oneidensis MR-1]
AAGCGCCGCCAAGGGGTGTTTGCCAAAATTCGGCAGACTGAGATGTCATCAGACGAACCCTTAGAACCTGATCCGGCTAATACCGGCGTAGGAATGGGCCAATCAACAGCA
# RNA - Cobalamin
>SO_0815(btuB) Score=74.4 Pos=-338 [Shewanella oneidensis MR-1]
TTGAGTCAACCTTCTGTGGTGCTTGCGATGATAGCGTCGCGAGATAATCGGGAAGCCAGTGAAATTCTGGCACTGCCCCCGCAACGGTAAAAGGTGAGAGACGGCCGCATTCGATAGGTGTTCACGATGAACCCGTAAATCGCAGTGTGCAAAGGTCAGTTTCGCGTTTATCTCTAGTGAGATGGATTATAGCCTAAGTCCGGAGACCGGCCCTAAAGGTGTTTTTGAGATT
>SO_1033(btuD) Score=57.8 Pos=-475 [Shewanella oneidensis MR-1]
TAAATGTCGCAGAAATAGGTGTTGGGAATTTCGCGCTAACCTATGCTATTGCATTAAGGTCATAAACGCCGGATCAACCCAAATATAATAGGGAATCGGGGCGCTGCCCGTCAGCCAGCCCGAACTGTACCCGCAACTGTGAGTAGTTAAAAGAAGCGCCTAGATTCTAGATTCTAGATTCTAGATTCTAGATTCTAGATTCTAAAGCCTAGCACCTTCTTTTCTACAAGTCAGGAGACCTGCCTATTGCTGTTTTCGCTGCGT
# RNA - Glycine
>SO_0858(glyP) Score=41.8 Pos=-392 [Shewanella oneidensis MR-1]
TGAAGGTAGCAGGAGAGTGGGGAATTAACCCCACACCGACGAGGCAACTTTGTTGTTGGAAGCATTCCATAAACAAAGCACTCTTTCAGGTGCCGCAAGGCGTGGACTGTTACTGGACGAG
>SO_0858(glyP) Score=54.2 Pos=-270 [Shewanella oneidensis MR-1]
CTCTGGAGAGACTACCGATTGCATTAACTTGCAATAATAGGTGGCGCCGAAGGCGAAAGTGTCGCTGTGTTGTTAAGCGACGCGAAACGCTCAGGCAAAAGGACAGAGGAG
# RNA - MOCO_RNA_motif
>SO_4452(moaA) Score=94.2 Pos=-122 [Shewanella oneidensis MR-1]
ACAGCTGACGGTTCTCCGAGCTTGCCTACCTAAGTCAACAGATATGGGGGTGTAGCCGTGGCAATAAGGCCACTGGGGTGAGTAAAGAAATGCTCTCGCCTCCCACACTTGGAAAGGTGATCATGTCTCAATTAC
# RNA - GEMM_RNA_motif
>SO_1072(cbp) Score=74.9 Pos=-221 [Shewanella oneidensis MR-1]
ACCGTATTGGGCAAACTAATTGAAAAATTAGGACGCAAAGCCTCCGGTCTAAGGTTGTAAAGGGATGTTAACTAAGATAGCGGGGTTGCTTAAGG
# RNA - yybP-ykoY
>SO_1071(COG2119) Score=45.4 Pos=-158 [Shewanella oneidensis MR-1]
CCATCTCGCTTCGGGGGAGTAGCTAACTGGATTTCGAGCCATCGATCTCTAGGGTGAACGTCAACATACTTGGCCGCATGCCATGGTGTTCACAGCAAATCATCGATTTGTCTTGCAAGACCTGAGCACAATAA
# RNA - mini-ykkC
>SO_1901(ykkC) Score=43.8 Pos=-62 [Shewanella oneidensis MR-1]
CTTAGGGACGACCCTAAATACGCCGATATCAATTTGGGGACGACCCCGTA
# RNA - His_leader
>SO_2074(hisG) Score=47.3 Pos=-196 [Shewanella oneidensis MR-1]
ACCATCATCACCACCATATGCGGTAGCCTTCGGACGTTCACTGCCGGAGGACTATATCCTTCTGGCGGACTGATTCAAAGATGATCATAAACCCCTGGAAGGAATTCCGGGGGTTTTTGCTT
# RNA - Leu_leader
>SO_4236(leuA) Score=24.1 Pos=-111 [Shewanella oneidensis MR-1]
TCGATAGATAGGCAAAACACTCATAAACCCCGCACTAATGTTGCGGGGTTTTTT
# RNA - S15
>SO_1207(rpsO) Score=98.6 Pos=-56 [Shewanella oneidensis MR-1]
CCTCTGGCTGAGTTAGTGATCGGCTGGAGATTATCATTTTATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAAATCCTGGCTGAATTTGGCCGTGGCGCAAA
# RNA - Thr_leader
>SO_3415(thrA) Score=39.8 Pos=-153 [Shewanella oneidensis MR-1]
GTAATTACTATTATTACAACCACCACTACAACCAGAGTGGGGGCGGGCTGATACACCCTAAAGAATTTAACGACGAGCCCGCTTCCCACAAAGAAGCGGGCTTTTTTGTTT
# RNA - Trp_leader
>SO_3019(trpE) Score=44 Pos=-160 [Shewanella oneidensis MR-1]
TCATTTGGTGGTGGCACTTCCCAACTTAGCGGGTAGTGTGAAGCTCTGTGCTCATTTGAAAGTAACAGAATCAACAGAAAAGCCCGCAGAAATGCGGGCTTTTTTGTTG
# TF - Fur: SO1937
>SO1188 Score=5.4 Pos=-185 [Shewanella oneidensis MR-1]
TTTTGATAATAAATATCATTT
>SO0744(fbpA) Score=5.7 Pos=-76 [Shewanella oneidensis MR-1]
AACTGATAACTATTATCATTA
>SO0447 Score=5.2 Pos=-146 [Shewanella oneidensis MR-1]
TATTGCGAACTATTCTCATCA
>SO0583(bfd) Score=5.3 Pos=-55 [Shewanella oneidensis MR-1]
ATTTGATAAGCGTTTTCATTT
>SO1111(bfr2) Score=5.2 Pos=-125 [Shewanella oneidensis MR-1]
TAATGAGAATGCTTTTAATTA
>SO0139(ftn) Score=5.7 Pos=-133 [Shewanella oneidensis MR-1]
AAATGAAAATCATTTTTATCA
>SO4740 Score=6 Pos=-60 [Shewanella oneidensis MR-1]
TAATGAGAATTGTTATCATCT
>SO3062 Score=5.5 Pos=-67 [Shewanella oneidensis MR-1]
TGTTGAGAACAATTCTCATCT
>SO1783(feoA) Score=5.4 Pos=-121 [Shewanella oneidensis MR-1]
AATTGAAAACTATTATCGTTA
>SO1782(mtrD) Score=5.4 Pos=-370 [Shewanella oneidensis MR-1]
TAACGATAATAGTTTTCAATT
>SO3030(pubA) Score=5.7 Pos=-208 [Shewanella oneidensis MR-1]
AGATGAGAACGATTTGCATTT
>SO1779(omcA) Score=5.6 Pos=-64 [Shewanella oneidensis MR-1]
TAATGAGATTTGTTCTTATTT
>SO3669(hmuA) Score=5.7 Pos=-169 [Shewanella oneidensis MR-1]
AAATGATAATGATTTCTATTT
>SO3670(tonB) Score=5.7 Pos=-97 [Shewanella oneidensis MR-1]
AAATAGAAATCATTATCATTT
>SO4423.1(SO4423.1) Score=5.4 Pos=-98 [Shewanella oneidensis MR-1]
TAATAAAAATCGTTACCATTT
>SO3344 Score=6 Pos=-44 [Shewanella oneidensis MR-1]
AAATGATAATGATTATCAGTT
>SO4743 Score=5.7 Pos=-116 [Shewanella oneidensis MR-1]
AAATAAAAACAATTCTTATTT
>SO4700 Score=5.3 Pos=-86 [Shewanella oneidensis MR-1]
AAATCAAATCCATTCTCATTA
>SO3914 Score=5.1 Pos=-108 [Shewanella oneidensis MR-1]
AAATGATAATAATTATTGATC
>SO2841 Score=5.4 Pos=-60 [Shewanella oneidensis MR-1]
GACTGATAATAGTTTTCATTT
>SO2426 Score=5.6 Pos=-2 [Shewanella oneidensis MR-1]
AAATGATATTGATTCTCGTTT
>SO0798 Score=6.1 Pos=-62 [Shewanella oneidensis MR-1]
AAATAATAACAATTCTCATTT
>SO1482 Score=5 Pos=-49 [Shewanella oneidensis MR-1]
GGATGGAAATCATTATCATTC
>SO1580 Score=5.5 Pos=-82 [Shewanella oneidensis MR-1]
ATGTGAGAATTATTCTCATCT
>SO1755 Score=5.3 Pos=-30 [Shewanella oneidensis MR-1]
AATTGAAAATGATTTTCACTG
>SO2039 Score=5.6 Pos=-44 [Shewanella oneidensis MR-1]
AAATGCGAATAATTAGCAATT
>SO3025 Score=5.8 Pos=-220 [Shewanella oneidensis MR-1]
AAATGACAATAGTTGTCATTT
>SO3406 Score=5.7 Pos=-273 [Shewanella oneidensis MR-1]
AAATGATATTGTTTATCATTT
>SO4516(viuA) Score=5.8 Pos=-100 [Shewanella oneidensis MR-1]
AAATGATATTGGTTATCAATT
>SO_4523(irgA) Score=6.1 Pos=-50 [Shewanella oneidensis MR-1]
TATTGAAAATTATTATCATTT
>SO3371 Score=4.7 Pos=-59 [Shewanella oneidensis MR-1]
TTATGATAATGAACATTATTT
>SO0719 Score=4.9 Pos=-40 [Shewanella oneidensis MR-1]
AGGTAGGAACAATTCTCATTT
# TF - Crp: SO0624
>SO4313(hemC) Score=4.5 Pos=-132 [Shewanella oneidensis MR-1]
AAATGAGAGGTCCATCACACTT
>SO3780(cydD) Score=4.4 Pos=-191 [Shewanella oneidensis MR-1]
TTTATTGATCAGCATCGCATTT
>SO1064(SO1064) Score=4.4 Pos=-56 [Shewanella oneidensis MR-1]
AACTGTGATTAATTTCACTCTA
>SO1326(SO1326) Score=4.3 Pos=-294 [Shewanella oneidensis MR-1]
AATAGTGATTTTTATTGCAAAT
>SO2727(cctA) Score=4.4 Pos=-184 [Shewanella oneidensis MR-1]
TTACATGATGCAGCGCACATTT
>SO0617(astC) Score=4 Pos=-142 [Shewanella oneidensis MR-1]
AACTGGTATTTTGATCACAATT
>SO2806(SO2806) Score=4.3 Pos=-95 [Shewanella oneidensis MR-1]
TCTTGTGAATTGAGTCACATAG
>SO2858(SO2858) Score=4.8 Pos=-105 [Shewanella oneidensis MR-1]
TATTGTGAGTAAGTTCGCAAAT
>SO4139(SO4139) Score=4.3 Pos=-162 [Shewanella oneidensis MR-1]
TTACATGATACGCTTCACAATG
>SO0432(acnB) Score=4.1 Pos=-141 [Shewanella oneidensis MR-1]
GAGTGTGACCTGATTCATACTT
>SO0544(SO0544) Score=4 Pos=-141 [Shewanella oneidensis MR-1]
TTTTGTGATTTAGCGCATAACG
>SO0543(SO0543) Score=3.7 Pos=-192 [Shewanella oneidensis MR-1]
CGTTATGCGCTAAATCACAAAA
>SO4138(SO4138) Score=4.2 Pos=-96 [Shewanella oneidensis MR-1]
CATTGTGAAGCGTATCATGTAA
>SO4126 Score=4.1 Pos=-92 [Shewanella oneidensis MR-1]
TTAATTGACCTAAATCAAACTT
>SO0324(ygbA) Score=4.1 Pos=-97 [Shewanella oneidensis MR-1]
TTTTGTGCGCACCTTCATAAAT
>SO3120(SO3120) Score=4.3 Pos=-186 [Shewanella oneidensis MR-1]
AAACGCGATCTTTATCACTATT
>SO4743(SO4743) Score=4.9 Pos=-164 [Shewanella oneidensis MR-1]
AATTTTGATCTGTATCACGCAA
>SO3403(yfiA-1) Score=4.7 Pos=-142 [Shewanella oneidensis MR-1]
TTCTTTGATAGGTCTCACATTT
>SO0264(scyA) Score=4 Pos=-234 [Shewanella oneidensis MR-1]
CAATTTGATATGGTTCCAATAA
>SO0264(scyA) Score=4.1 Pos=-125 [Shewanella oneidensis MR-1]
TGCTGAGATTCTAATCACAAAA
>SO0479(mccA) Score=3.8 Pos=-111 [Shewanella oneidensis MR-1]
TTTTTTGCTTTTTCTCTCATTC
>SO0096(hutC) Score=4.1 Pos=-151 [Shewanella oneidensis MR-1]
TTATGTGAGCTAGCTTGTATTT
>SO1363(hcp) Score=4.2 Pos=-124 [Shewanella oneidensis MR-1]
TAAAGTGATCTTTCTCTAAGAT
>SO4699(prlC) Score=4.2 Pos=-136 [Shewanella oneidensis MR-1]
AATTGAGAACTGGCTCACTTTT
>SO2791(cdd) Score=4.1 Pos=-82 [Shewanella oneidensis MR-1]
AAACGCGAACTAACTCGCATTT
>SO4519(SO4519) Score=4.1 Pos=-214 [Shewanella oneidensis MR-1]
TTTTGTTAAGCAGATCATGTTT
>SO0022(pepQ) Score=4.4 Pos=-237 [Shewanella oneidensis MR-1]
CTTTGTGATACACTGCACAAAG
>SO0770(mdh) Score=4.3 Pos=-47 [Shewanella oneidensis MR-1]
AAATTAGATCCATGTCACACAT
>SO4666(cytcB) Score=4.4 Pos=-95 [Shewanella oneidensis MR-1]
AAATATTACCCCGATCACATTA
>SO1415(SO1415) Score=3.8 Pos=-135 [Shewanella oneidensis MR-1]
GTATTTGAAGTAACTCACAAAG
>SO3980(nrfA) Score=3.9 Pos=-149 [Shewanella oneidensis MR-1]
AAGTGTGAACAACAACACTATT
>SO3980(nrfA) Score=4.1 Pos=-126 [Shewanella oneidensis MR-1]
CATTTTGATCTAGCGCAAACTT
>SO3534(mviN) Score=4.5 Pos=-49 [Shewanella oneidensis MR-1]
TTTTTTGAGATGAATCACCTAA
>SO3119 Score=4.5 Pos=-166 [Shewanella oneidensis MR-1]
AATAGTGATAAAGATCGCGTTT
>SO4131(SO4131) Score=4.1 Pos=-199 [Shewanella oneidensis MR-1]
TTATGTGATTTTCACAACAACA
>SO0426(lpdA) Score=4.7 Pos=-113 [Shewanella oneidensis MR-1]
TATTGTGATCAGTATCAAACAC
>SO0396(frdC1) Score=4 Pos=-144 [Shewanella oneidensis MR-1]
TTTTGTGATCATCTTCTAAGAG
>SO0397(fdrC2) Score=3.9 Pos=-79 [Shewanella oneidensis MR-1]
ATTTGTGAGCGATATTAATTTT
>SO4134(SO4134) Score=4.7 Pos=-91 [Shewanella oneidensis MR-1]
AATATTGATCCAGATCACGTTT
>SO4142(SO4142) Score=3.9 Pos=-121 [Shewanella oneidensis MR-1]
GAAAGTGACACACCTCAAATAA
>SO3542(phk) Score=4.2 Pos=-95 [Shewanella oneidensis MR-1]
AATTTGGATGCAGAACACATTT
>SO1673(ompW) Score=4.4 Pos=-161 [Shewanella oneidensis MR-1]
TAGCGTGATTTGGATCTCAATG
>SO3422(yfiA-2) Score=4.7 Pos=-78 [Shewanella oneidensis MR-1]
AAGTGTGATTTAACTCTCGTTT
>SO1415(SO1415) Score=4 Pos=-94 [Shewanella oneidensis MR-1]
AGGTGTGACCTTTATCCCGATT
>SO2427 Score=5.1 Pos=-319 [Shewanella oneidensis MR-1]
AAGTGTGATTAAAATCACACTT
>SO2222(fumB) Score=4.6 Pos=-105 [Shewanella oneidensis MR-1]
AAATGTGATGTAGCCCAAAAAG
>SO3553(SO3553) Score=3.9 Pos=-70 [Shewanella oneidensis MR-1]
TTTTGCAACTATGATCACACAA
>SO1278(SO1278) Score=4.1 Pos=-57 [Shewanella oneidensis MR-1]
TAAAATGAACTAGATCAAAATA
>SO4131(SO4131) Score=3.8 Pos=-157 [Shewanella oneidensis MR-1]
AATTGTAAATTTTTGCATATAT
>SO1103(nqrA-2) Score=4.3 Pos=-129 [Shewanella oneidensis MR-1]
CAGCGTGATTGCGATCGCATTT
>SO0439(SO0439) Score=4.4 Pos=-34 [Shewanella oneidensis MR-1]
ATACGTGATCTGACGCACATCA
>SO2536(fadE2) Score=4.8 Pos=-72 [Shewanella oneidensis MR-1]
AATTGTGATCGCAATCAACAAA
>SO0141(SO0141) Score=4.1 Pos=-161 [Shewanella oneidensis MR-1]
TTTCGTGAGCTAGATTAGATAT
>SO1065(fkpA) Score=4.3 Pos=-119 [Shewanella oneidensis MR-1]
TAGAGTGAAATTAATCACAGTT
>SO3553(SO3553) Score=3.9 Pos=-70 [Shewanella oneidensis MR-1]
TTTTGCAACTATGATCACACAA
>SO0862(serA) Score=4.7 Pos=-145 [Shewanella oneidensis MR-1]
TTATGCGATATTGTTCTCATTT
>SO2364(ccoN) Score=4.1 Pos=-125 [Shewanella oneidensis MR-1]
AAATGTGAAGGATAACGCATTG
>SO0940(cadC) Score=4.3 Pos=-246 [Shewanella oneidensis MR-1]
TAATGTGAGCGAAGGCACGATA
>SO1278(SO1278) Score=4 Pos=-189 [Shewanella oneidensis MR-1]
TAATGGGAGCGTCATCACACTC
>SO0572(SO0572) Score=4.4 Pos=-102 [Shewanella oneidensis MR-1]
TATTTTGACTCAAGTCAAAATT
>SO3613(purT) Score=3.8 Pos=-161 [Shewanella oneidensis MR-1]
TAGCTTGATCAAAAACACAGTT
>SO3797(SO3797) Score=4.5 Pos=-53 [Shewanella oneidensis MR-1]
TTTTGTTATACTCGTCACCTTT
>SO2591(ycbW) Score=3.8 Pos=-63 [Shewanella oneidensis MR-1]
TATTTTGATATTGAATAAAATA
>SO2591(ycbW) Score=3.8 Pos=-34 [Shewanella oneidensis MR-1]
TGATGTGCCAGTGTTCAAATAG
>SO2591(ycbW) Score=3.7 Pos=-2 [Shewanella oneidensis MR-1]
TTATGTTATTATTGCCGCAAAA
>SO4018(SO4018) Score=4.4 Pos=-158 [Shewanella oneidensis MR-1]
AAATGTGATTTGTATCAATATC
>SO3090(SO3090) Score=4.6 Pos=-165 [Shewanella oneidensis MR-1]
AAGTGTGATCTGATTCTAACTT
>SO4619(yhgI) Score=3.9 Pos=-129 [Shewanella oneidensis MR-1]
AATCGTGATCACTATGGCAAAA
>SO4570(SO4570) Score=4.4 Pos=-207 [Shewanella oneidensis MR-1]
ATTTGTGAGCTAGTTAGAATTA
>SO4232(SO4232) Score=4.4 Pos=-202 [Shewanella oneidensis MR-1]
AAAAGTGATTTTCGTCACTAAA
>SO1788(miaE) Score=4.3 Pos=-151 [Shewanella oneidensis MR-1]
CTGTGTGATCAGGATCTCAGTT
>SO1788(miaE) Score=3.7 Pos=-12 [Shewanella oneidensis MR-1]
TTGAGTGATCCCATGCAACAAT
>SO3774(SO3774) Score=4.4 Pos=-146 [Shewanella oneidensis MR-1]
TATAGTGTTGTCCGTCACATTT
>SO0624(crp) Score=3.5 Pos=-174 [Shewanella oneidensis MR-1]
TTAGTTGACTAATATCACTAAA
>SO0608(petA) Score=3.7 Pos=-103 [Shewanella oneidensis MR-1]
TAATGAGCCCCGCTTCAAACTT
>SO0608(petA) Score=3.7 Pos=-132 [Shewanella oneidensis MR-1]
CACTATGATCTGCTTCTAATTT
>SO1613 Score=4 Pos=-75 [Shewanella oneidensis MR-1]
TTCCTTGATTTAGCTCACACTC
>SO2629(icd) Score=4.1 Pos=-199 [Shewanella oneidensis MR-1]
AAATGTGATCTACACCTAAATG
>SO3537(rpsT) Score=4.5 Pos=-225 [Shewanella oneidensis MR-1]
TTAGGTGATTCATCTCAAAAAA
>SO3286(cydA) Score=4.2 Pos=-203 [Shewanella oneidensis MR-1]
TAGTGTGACTAGGGTCTCAGTA
>SO2099(hyaA) Score=4 Pos=-105 [Shewanella oneidensis MR-1]
ATTCTTGATATGCATCAATAAT
>SO0939(SO0939) Score=4.3 Pos=-382 [Shewanella oneidensis MR-1]
TACTGTGATCCCGTTAACCCAA
>SO0939(SO0939) Score=4.6 Pos=-217 [Shewanella oneidensis MR-1]
TATCGTGCCTTCGCTCACATTA
>SO4452(moaA) Score=3.8 Pos=-220 [Shewanella oneidensis MR-1]
TTGGGTGAGCACTGTCACAGAT
>SO4606(SO4606) Score=4.2 Pos=-317 [Shewanella oneidensis MR-1]
AGAAGTGATCTTGATCAATTTT
>SO0625(sel1) Score=4.2 Pos=-267 [Shewanella oneidensis MR-1]
TTTAGTGATATTAGTCAACTAA
>SO1783(feoA) Score=4 Pos=-153 [Shewanella oneidensis MR-1]
CATAGAGATTTTTGTCACATAA
>SO3699.1(SO3699.1) Score=4 Pos=-183 [Shewanella oneidensis MR-1]
AAGTGTTACACCTATCCCATAT
>SO4003(SO4003) Score=3.7 Pos=-165 [Shewanella oneidensis MR-1]
TAAGGTGAGACTGCGCAAAATA
>SO1689(SO1689) Score=4.5 Pos=-96 [Shewanella oneidensis MR-1]
AAGTGTGATACTTGCCACAAAA
>SO4313(hemC) Score=3.9 Pos=-172 [Shewanella oneidensis MR-1]
GATTGTGCTCATGTTAACACTT
>SO1414(SO1414) Score=4.3 Pos=-220 [Shewanella oneidensis MR-1]
CTTTGTGAGTTACTTCAAATAC
>SO1673(ompW) Score=4.4 Pos=-110 [Shewanella oneidensis MR-1]
AATTTTGATTTGGATCAATAAT
>SO4504 Score=4 Pos=-130 [Shewanella oneidensis MR-1]
TTTGATGATCCACTTCAAACTA
>SO0397(fdrC) Score=3.9 Pos=-79 [Shewanella oneidensis MR-1]
ATTTGTGAGCGATATTAATTTT
>SO1666(phhA) Score=4.5 Pos=-75 [Shewanella oneidensis MR-1]
AACTGTGAGGGAGTTAACAAAA
>SO4700 Score=4.5 Pos=-154 [Shewanella oneidensis MR-1]
AAAAGTGAGCCAGTTCTCAATT
>SO0263(ccmA) Score=4.2 Pos=-222 [Shewanella oneidensis MR-1]
TTTTGTGATTAGAATCTCAGCA
>SO2757(SO2757) Score=4.2 Pos=-225 [Shewanella oneidensis MR-1]
ATTTAAGACCAATATCACATTT
>SO0769(argR) Score=4.5 Pos=-266 [Shewanella oneidensis MR-1]
ATGTGTGACATGGATCTAATTT
>SO1670(fahA) Score=5.1 Pos=-200 [Shewanella oneidensis MR-1]
AAATGTGATTTTGTTCACGCTA
>SO2010 Score=4.7 Pos=-70 [Shewanella oneidensis MR-1]
TTTTGTGATCTTCGTCACTGTA
>SO0442(purH) Score=4.1 Pos=-180 [Shewanella oneidensis MR-1]
TATTGTGAAATCGCGCAGAAAA
>SO3421(SO3421) Score=4.2 Pos=-244 [Shewanella oneidensis MR-1]
AAACGAGAGTTAAATCACACTT
>SO2753(SO2753) Score=4.7 Pos=-235 [Shewanella oneidensis MR-1]
TTAAGTGATCTGCCTCACTTAA
>SO2880(ydhD) Score=4.5 Pos=-157 [Shewanella oneidensis MR-1]
ATTTGTGATGTGAATCATTGTT
>SO0479(mccA) Score=4.3 Pos=-130 [Shewanella oneidensis MR-1]
TAATGTGCTCTAGCGCAGATTT
>SO3890(SO3890) Score=4.6 Pos=-196 [Shewanella oneidensis MR-1]
CCATGTGATCTGGTTCAAATTT
>SO4591(cymA) Score=4 Pos=-307 [Shewanella oneidensis MR-1]
AAATGTCGCCTTGATCACATTT
>SO3406(SO3406) Score=3.8 Pos=-298 [Shewanella oneidensis MR-1]
ATTTGTGCACAGCATCAACAAA
>SO1410(SO1410) Score=4.5 Pos=-122 [Shewanella oneidensis MR-1]
TGGCGTGATCCAATTCACCTTT
>SO1410(SO1410) Score=4.1 Pos=-82 [Shewanella oneidensis MR-1]
TATTGTTAGTCACGTAACAAAA
>SO0431(yniC) Score=3.9 Pos=-302 [Shewanella oneidensis MR-1]
AAGTATGAATCAGGTCACACTC
>SO0431(yniC) Score=3.8 Pos=-118 [Shewanella oneidensis MR-1]
TAACGAAATGCTTTTCACAGTA
>SO2587(hemB-1) Score=4 Pos=-197 [Shewanella oneidensis MR-1]
GTTTGTGATCGCTATCACTAAC
>SO2364(ccoN) Score=4.3 Pos=-173 [Shewanella oneidensis MR-1]
TTTTTTGACATGGCTCAAGTAT
>SO2881(sodB) Score=4.3 Pos=-91 [Shewanella oneidensis MR-1]
AACAATGATTCACATCACAAAT
>SO3089(fadI) Score=3.9 Pos=-131 [Shewanella oneidensis MR-1]
AAGTTAGAATCAGATCACACTT
>SO3896(omp35) Score=4.1 Pos=-67 [Shewanella oneidensis MR-1]
AAATGTGTTAAACCACACAAAA
>SO1782(mtrD) Score=3.8 Pos=-339 [Shewanella oneidensis MR-1]
TTATGTGACAAAAATCTCTATG
>SO4520(SO4520) Score=4.4 Pos=-172 [Shewanella oneidensis MR-1]
AAACATGATCTGCTTAACAAAA
>SO3981(narQ) Score=4.5 Pos=-151 [Shewanella oneidensis MR-1]
AATAGTGTTGTTGTTCACACTT
>SO3981(narQ) Score=3.7 Pos=-174 [Shewanella oneidensis MR-1]
AAGTTTGCGCTAGATCAAAATG
>SO1419(SO1419) Score=3.9 Pos=-117 [Shewanella oneidensis MR-1]
AAGTGTTAGCTAACTCATAGAT
>SO4019(SO4019) Score=4.2 Pos=-233 [Shewanella oneidensis MR-1]
GATATTGATACAAATCACATTT
>SO1389(SO1389) Score=3.8 Pos=-150 [Shewanella oneidensis MR-1]
AACTGTTAGCTTTATCACTCAA
>SO1388(SO1388) Score=4.1 Pos=-232 [Shewanella oneidensis MR-1]
TTGAGTGATAAAGCTAACAGTT
>SO2535(SO2535) Score=4.4 Pos=-194 [Shewanella oneidensis MR-1]
TTTGTTGATTGCGATCACAATT
>SO4667(engB) Score=4.7 Pos=-96 [Shewanella oneidensis MR-1]
TAATGTGATCGGGGTAATATTT
>SO4666(cytcB) Score=4.4 Pos=-95 [Shewanella oneidensis MR-1]
AAATATTACCCCGATCACATTA
>SO1778(mtrC) Score=3.5 Pos=-190 [Shewanella oneidensis MR-1]
TAGAAAGATCCAAGTCACACAT
>SO1778(mtrC) Score=3.7 Pos=-248 [Shewanella oneidensis MR-1]
TGTTGTTTTTTTGCTCTCAATT
>SO3987(SO3987) Score=3.9 Pos=-83 [Shewanella oneidensis MR-1]
TCTTGTGAGCGAGTTCACGCCT
>SO4118(SO4118) Score=4.3 Pos=-132 [Shewanella oneidensis MR-1]
AAATGTGACCTAATTGACGTAT
>SO4118(SO4118) Score=4.4 Pos=-318 [Shewanella oneidensis MR-1]
TATTGTAATTTAGTCAACATTT
>SO2112(rplY) Score=4.4 Pos=-95 [Shewanella oneidensis MR-1]
AAGTGTGATCAAGATCACGTGT
>SO3776(SO3776) Score=4.2 Pos=-137 [Shewanella oneidensis MR-1]
CAATGTGAGCGGCTTCAAAATG
>SO1278(SO1278) Score=4.4 Pos=-297 [Shewanella oneidensis MR-1]
CATTGTGAGTTGAGTCATATTT
>SO1162(lipB) Score=5.1 Pos=-68 [Shewanella oneidensis MR-1]
AAGTGTGATCTATCTTACATTT
>SO4349(ilvC) Score=4 Pos=-86 [Shewanella oneidensis MR-1]
TATAGTGACTTCAATCACAACC
>SO1963(hmgA) Score=3.8 Pos=-92 [Shewanella oneidensis MR-1]
AATTGATAAGAAGATCACAGTA
>SO1787(SO1787) Score=4.2 Pos=-149 [Shewanella oneidensis MR-1]
AACTGAGATCCTGATCACACAG
>SO4453(etfD) Score=4.3 Pos=-171 [Shewanella oneidensis MR-1]
ATCTGTGACAGTGCTCACCCAA
>SO3553(SO3553) Score=3.9 Pos=-70 [Shewanella oneidensis MR-1]
TTTTGCAACTATGATCACACAA
>SO2581(fadD1) Score=5.1 Pos=-155 [Shewanella oneidensis MR-1]
TTATGTGATGATGATCAAAATT
>SO2100(resA) Score=4.1 Pos=-265 [Shewanella oneidensis MR-1]
ATTATTGATGCATATCAAGAAT
>SO0936(cadC) Score=4.6 Pos=-117 [Shewanella oneidensis MR-1]
TTTATTGATGTAATTCACAGAT
>SO1965(hmgR) Score=4.4 Pos=-148 [Shewanella oneidensis MR-1]
TACTGTGATCTTCTTATCAATT
>SO2797(SO2797) Score=4.5 Pos=-70 [Shewanella oneidensis MR-1]
TTATGAGAGCAGAATCACATTT
>SO1522(lldP) Score=4.6 Pos=-262 [Shewanella oneidensis MR-1]
TTAAGTGACACCGATCACAGTT
>SO1522(lldP) Score=4.2 Pos=-180 [Shewanella oneidensis MR-1]
CAAAATGATCTAGATCATATAA
>SO3855(sfcA) Score=4 Pos=-66 [Shewanella oneidensis MR-1]
TTACGTGACCTATAGCACGTCT
>SO0162(pckA) Score=3.8 Pos=-150 [Shewanella oneidensis MR-1]
CTCAATGATCCAGCTCACACTT
>SO4133(udp) Score=4.1 Pos=-92 [Shewanella oneidensis MR-1]
TTCTGTGATCAAGTTAACCTTC
>SO1218(deoA) Score=3.9 Pos=-135 [Shewanella oneidensis MR-1]
AAGTGTGACCTAAATCTAGTTG
>SO2111(SO2111) Score=4.8 Pos=-79 [Shewanella oneidensis MR-1]
ACACGTGATCTTGATCACACTT
>SO3682 Score=3.8 Pos=-109 [Shewanella oneidensis MR-1]
TTGCGTGATTTTGTGCAAGCAT
>SO0849(napD) Score=3.9 Pos=-150 [Shewanella oneidensis MR-1]
AACTTTGATCCCGATCGACTAT
>SO0849(napD) Score=3.9 Pos=-260 [Shewanella oneidensis MR-1]
TAATGTGATTGGTATAAACCTC
>SO0935(nhaD) Score=4.3 Pos=-278 [Shewanella oneidensis MR-1]
CAATGTGATTGCTATCAACATA
>SO4312(cyaA) Score=5 Pos=-91 [Shewanella oneidensis MR-1]
AAGTGTGATGGACCTCTCATTT
>SO0021(fadB) Score=4.1 Pos=-210 [Shewanella oneidensis MR-1]
CTTTGTGCAGTGTATCACAAAG
>SO1538(icd) Score=4.7 Pos=-149 [Shewanella oneidensis MR-1]
ATTCGTGATATTGCTCACTATT
>SO4154(SO4154) Score=3.7 Pos=-69 [Shewanella oneidensis MR-1]
AATTGTGCATTAGTTAATCTAT
>SO4154(SO4154) Score=4.9 Pos=-9 [Shewanella oneidensis MR-1]
TAATTTGATATGTATCATATAA
>SO1418(apbE) Score=3.8 Pos=-91 [Shewanella oneidensis MR-1]
ATCTATGAGTTAGCTAACACTT
>SO1329(cyaC) Score=4.7 Pos=-162 [Shewanella oneidensis MR-1]
TGTATTGATCCAGATCACAAAT
>SO3395(SO3395) Score=4.1 Pos=-257 [Shewanella oneidensis MR-1]
AGATGTGATCGGTTGCGCGAAT
>SO3552(SO3552) Score=4.1 Pos=-152 [Shewanella oneidensis MR-1]
TTGTGTGATCATAGTTGCAAAA
>SO3914(SO3914) Score=4 Pos=-136 [Shewanella oneidensis MR-1]
AACAGTGATGCTGATTAAATTA
>SO1328(SO1328) Score=4 Pos=-109 [Shewanella oneidensis MR-1]
AAAATCGATTTTGCTCACACAA
>SO0355(SO0355) Score=4.4 Pos=-84 [Shewanella oneidensis MR-1]
TTATTTGCGCTACATCACAAAA
>SO1001(chaA) Score=4.6 Pos=-118 [Shewanella oneidensis MR-1]
AAAAGTGATCAAGCTCAAACAT
>SO2586(SO2586) Score=4.1 Pos=-177 [Shewanella oneidensis MR-1]
GTTAGTGATAGCGATCACAAAC
# TF - NarP: SO3982
>SO3058(SO3058) Score=4.3 Pos=-77 [Shewanella oneidensis MR-1]
TACCTCCTTTTAGGTG
>SO2805(nnrS) Score=4.2 Pos=-78 [Shewanella oneidensis MR-1]
TACTCATAAGGGGATA
>SO3980(nrfA) Score=5.2 Pos=-95 [Shewanella oneidensis MR-1]
TACCCCCTAAGAGGTA
>SO4520(SO4520) Score=4.4 Pos=-95 [Shewanella oneidensis MR-1]
TACTCCATTCGAGGTA
>SO4452(moaA) Score=4.8 Pos=-167 [Shewanella oneidensis MR-1]
TACCTGTTTAGGGGTA
>SO3981(narQ) Score=5.1 Pos=-199 [Shewanella oneidensis MR-1]
TACCTCTTAGGGGGTA
>SO0398(frdA) Score=4.2 Pos=-19 [Shewanella oneidensis MR-1]
TACCCGTTAAGGAGCA
>SO0970(fccA) Score=4.5 Pos=-43 [Shewanella oneidensis MR-1]
TATCCCTTATTAAGTA
>SO1659(mtrF) Score=4.9 Pos=-80 [Shewanella oneidensis MR-1]
TACCACTTTATAAGTA
>SO0624(crp) Score=4.2 Pos=-217 [Shewanella oneidensis MR-1]
TAACTCTACAGAGTTA
>SO3140.1(SO3141) Score=4.3 Pos=-205 [Shewanella oneidensis MR-1]
TACTTCCAAAGATATA
>SO1673(ompW) Score=4.6 Pos=-135 [Shewanella oneidensis MR-1]
TACCTAAAAATAAGTA
>SO1490(adhB) Score=5.1 Pos=-68 [Shewanella oneidensis MR-1]
TACCCCTTAATTGGTA
>SO4062(psrA) Score=5 Pos=-179 [Shewanella oneidensis MR-1]
TACCCCTTTAGGAATA
>SO3896(omp35) Score=5.2 Pos=-255 [Shewanella oneidensis MR-1]
TACCTCTTTAGTGGTA
>SO1779(omcA) Score=4.8 Pos=-179 [Shewanella oneidensis MR-1]
TACCTCAAAAGAAATA
>SO0849(napD) Score=4.9 Pos=-119 [Shewanella oneidensis MR-1]
TACCTCTTGTGAGGTA
>SO3059(SO3059) Score=3.9 Pos=-104 [Shewanella oneidensis MR-1]
CACCTAAAAGGAGGTA
>SO1778(mtrC) Score=5.2 Pos=-204 [Shewanella oneidensis MR-1]
TACCTCTTTAGAAATA
# TF - Fnr: SO2356
>SO4453(etfD) Score=4.3 Pos=-198 [Shewanella oneidensis MR-1]
TTGATCAGGTTCAA
>SO3980(nrfA) Score=5 Pos=-122 [Shewanella oneidensis MR-1]
TTGATCTAGCGCAA
>SO4512(fdhX2) Score=4.3 Pos=-184 [Shewanella oneidensis MR-1]
CTGTTCTAGATCAA
>SO3981(narQ) Score=4.9 Pos=-170 [Shewanella oneidensis MR-1]
TTGCGCTAGATCAA
>SO4503(fdhD) Score=4.8 Pos=-330 [Shewanella oneidensis MR-1]
TTGAAGTGGATCAT
>SO1782(mtrD) Score=4.2 Pos=-397 [Shewanella oneidensis MR-1]
TTTACCTAGATCAA
>SO4304(hupE) Score=4.2 Pos=-91 [Shewanella oneidensis MR-1]
GTGATAAGGATCAA
>SO1522(lldP) Score=5.3 Pos=-176 [Shewanella oneidensis MR-1]
ATGATCTAGATCAT
>SO1673(ompW) Score=4.3 Pos=-293 [Shewanella oneidensis MR-1]
TTGATGTAAATGAA
>SO1673(ompW) Score=5.2 Pos=-106 [Shewanella oneidensis MR-1]
TTGATTTGGATCAA
>SO2099(hyaA) Score=4.8 Pos=-101 [Shewanella oneidensis MR-1]
TTGATATGCATCAA
>SO0397(frdC1) Score=4.3 Pos=-105 [Shewanella oneidensis MR-1]
TTGATCTAACTCAG
>SO3286(cydA) Score=4.9 Pos=-338 [Shewanella oneidensis MR-1]
TTGATTTGAATCAA
>SO0922(gltP) Score=4 Pos=-171 [Shewanella oneidensis MR-1]
GTGACATAGATCAT
>SO1111(bfr2) Score=5.3 Pos=-43 [Shewanella oneidensis MR-1]
TTGATTTAGATCAA
>SO3404(aer) Score=4.2 Pos=-80 [Shewanella oneidensis MR-1]
GTGAACTTAATCAA
>SO4452(moaA) Score=4.5 Pos=-185 [Shewanella oneidensis MR-1]
TTGAACCTGATCAA
>SO2364(ccoN) Score=5.6 Pos=-212 [Shewanella oneidensis MR-1]
TTGATCTAGATCAA
>SO2364(ccoN) Score=4.2 Pos=-169 [Shewanella oneidensis MR-1]
TTGACATGGCTCAA
>SO2364(ccoN) Score=4.3 Pos=-106 [Shewanella oneidensis MR-1]
TTGACATAGCTCAA
>SO1329(cyaB) Score=4.6 Pos=-158 [Shewanella oneidensis MR-1]
TTGATCCAGATCAC
>SO2880(ydhD) Score=4.5 Pos=-153 [Shewanella oneidensis MR-1]
GTGATGTGAATCAT
>SO0849(napD) Score=4.2 Pos=-146 [Shewanella oneidensis MR-1]
TTGATCCCGATCGA
>SO0579(SO0579) Score=4.9 Pos=-145 [Shewanella oneidensis MR-1]
TTGATATAAATCAA
>SO4606(coxB) Score=4.9 Pos=-313 [Shewanella oneidensis MR-1]
GTGATCTTGATCAA
>SO2355(uspE) Score=4.9 Pos=-72 [Shewanella oneidensis MR-1]
TTGATCTAGAACAA
>SO1783(feoA) Score=4.3 Pos=-87 [Shewanella oneidensis MR-1]
TTGATCTAGGTAAA
>SO4504(SO4504) Score=4.2 Pos=-126 [Shewanella oneidensis MR-1]
ATGATCCACTTCAA
>SO2834(nrdD) Score=5.2 Pos=-121 [Shewanella oneidensis MR-1]
ATGATCTGGATCAT
>SO2834(nrdD) Score=4 Pos=-269 [Shewanella oneidensis MR-1]
TTGATTTTAAGCAT
# TF - MetJ: SO4057
>SO1030(metH) Score=6.3 Pos=-119 [Shewanella oneidensis MR-1]
GGACGTCTATACGTAT
>SO1030(metH) Score=5.7 Pos=-111 [Shewanella oneidensis MR-1]
ATACGTATAAATGTCC
>SO0817(metR) Score=6.3 Pos=-97 [Shewanella oneidensis MR-1]
GGGCGTCTGGACGTCT
>SO0817(metR) Score=6.4 Pos=-89 [Shewanella oneidensis MR-1]
GGACGTCTAGAAGTTT
>SO1095(metY) Score=5.2 Pos=-215 [Shewanella oneidensis MR-1]
AGCCATCAAAACTTAT
>SO1095(metY) Score=5.7 Pos=-132 [Shewanella oneidensis MR-1]
AGACTTCCAGATGGCC
>SO0929(metK) Score=5.8 Pos=-59 [Shewanella oneidensis MR-1]
AGCCGTCTAGATGTAG
>SO0818(metE) Score=6.6 Pos=-126 [Shewanella oneidensis MR-1]
AAACTTCTAGACGTCC
>SO0818(metE) Score=6.5 Pos=-118 [Shewanella oneidensis MR-1]
AGACGTCCAGACGCCC
>SO0815(btuB) Score=6.2 Pos=-431 [Shewanella oneidensis MR-1]
ATCCGTATAGACGTCT
>SO1675(COG3126) Score=6.7 Pos=-97 [Shewanella oneidensis MR-1]
AGACATCCAGAAGTCT
>SO2337(msrA) Score=6.5 Pos=-29 [Shewanella oneidensis MR-1]
AGCCATCTAGACTTCT
>SO4057(metJ) Score=6.1 Pos=-118 [Shewanella oneidensis MR-1]
AGACGTCTAAACATAA
>SO4057(metJ) Score=7.3 Pos=-126 [Shewanella oneidensis MR-1]
AGACGTTTAGACGTCT
>SO4057(metJ) Score=5.6 Pos=-134 [Shewanella oneidensis MR-1]
AGGCGTTAAGACGTTT
>SO4057(metJ) Score=6 Pos=-173 [Shewanella oneidensis MR-1]
GGACGTCTAAATGTAC
>SO4057(metJ) Score=7 Pos=-181 [Shewanella oneidensis MR-1]
AGATGTCTGGACGTCT
>SO1087(metT) Score=6.8 Pos=-152 [Shewanella oneidensis MR-1]
AAACATCCAGACGTCT
>SO1087(metT) Score=5.6 Pos=-144 [Shewanella oneidensis MR-1]
AGACGTCTAGATTGAC
>SO4054(metF) Score=6.4 Pos=-100 [Shewanella oneidensis MR-1]
GGACATATAGACGTCC
>SO4054(metF) Score=6.8 Pos=-92 [Shewanella oneidensis MR-1]
AGACGTCCAAACGTCC
>SO4056(metB) Score=7.3 Pos=-93 [Shewanella oneidensis MR-1]
AGACGTCTAAACGTCT
>SO4056(metB) Score=7.2 Pos=-38 [Shewanella oneidensis MR-1]
AGACGTCCAGACATCT
# TF - SO2282: SO2282
>SO2282(SO2282) Score=8.1 Pos=-7 [Shewanella oneidensis MR-1]
TATTGTCATGGTACAATT
>SO2282(SO2282) Score=8.1 Pos=-82 [Shewanella oneidensis MR-1]
TATTGTACGCATACAATT
>SO2280(PF07690) Score=7.2 Pos=-75 [Shewanella oneidensis MR-1]
AATTGTTACCCTACAATT
# TF - TsrR: SO0490
>SO0478(ccmF-2) Score=6.9 Pos=-281 [Shewanella oneidensis MR-1]
GTTTTTTTAGATCTAAAAAAAC
>SO0479(tsrA) Score=6.9 Pos=-250 [Shewanella oneidensis MR-1]
GTTTTTTTAGATCTAAAAAAAC
# TF - PhsR: SO4157
>SO4062(phsA) Score=6.6 Pos=-207 [Shewanella oneidensis MR-1]
GCCTATGTGGTTTACCACAATAGC