# TF - NiaR: SSU05_2020 3593040 SSU05_2019 niaX # TF - CmbR: SSU05_0784 3592793 SSU05_1774 metE 3592794 SSU05_1775 metF 3592581 SSU05_1562 metB 3592580 SSU05_1561 metC 3592792 SSU05_1773 yvdE 3592322 SSU05_1306 metA # RNA - L10_leader 3592000 SSU05_0984 rplJ 3591999 SSU05_0983 rplL # RNA - TPP 3591745 SSU05_0732 SSU05_0732 3591746 SSU05_0733 thiD 3591747 SSU05_0734 thiM 3591748 SSU05_0735 thiE 3591536 SSU05_0523 thiT # RNA - FMN 3592714 SSU05_1696 ribU # RNA - PyrR 3592025 SSU05_1009 pyrF 3592024 SSU05_1008 null 3592023 SSU05_1007 pyrE 3592027 SSU05_1011 pyrK 3592956 SSU05_1937 pyrP 3592954 SSU05_1935 pyrP 3591808 SSU05_0792 carB 3591807 SSU05_0791 carA 3591805 SSU05_0789 pyrR 3591806 SSU05_0790 pyrB # RNA - Glycine 3591244 SSU05_0249 glyP # RNA - L13_leader 3592917 SSU05_1898 rplM 3592916 SSU05_1897 rpsI # RNA - L19_leader 3591353 SSU05_0352 rplS # RNA - L20_leader 3592286 SSU05_1270 infC 3592285 SSU05_1269 rpmI 3592284 SSU05_1268 rplT # RNA - L21_leader 3591797 SSU05_0781 rplU 3591798 SSU05_0782 rpmA # RNA - S15 3592953 SSU05_1934 rpsO # TF - Rex: SSU05_1069 3591154 SSU05_0157 pgk 3592085 SSU05_1069 rex 3592086 SSU05_1070 guaA 3591275 SSU05_0280 adhE 3591332 SSU05_0336 fba 3591274 SSU05_0279 adhB1 # RNA - preQ1-II 3592633 SSU05_1614 queT # RNA - yybP-ykoY 3592436 SSU05_1419 atcL 3592435 SSU05_1418 atcL # RNA - T-box(Ala) 3592253 SSU05_1237 COG4894 3592252 SSU05_1236 alaS # RNA - T-box(Gly) 3592785 SSU05_1766 null 3592784 SSU05_1765 glyQ 3592783 SSU05_1764 glyS 3592782 SSU05_1763 ylaC # RNA - T-box(Ile) 3591501 SSU05_0488 null 3591502 SSU05_0489 ileS # RNA - T-box(Phe) 3592168 SSU05_1152 pheS 3592167 SSU05_1151 paiA 3592166 SSU05_1150 pheT # RNA - T-box(Ser) 3592801 SSU05_1782 serS # RNA - T-box(Thr) 3592383 SSU05_1367 null 3592382 SSU05_1366 thrS # RNA - T-box(Trp) 3592505 SSU05_1487 trpX 3592504 SSU05_1486 trpY 3592503 SSU05_1485 trpZ 3592502 SSU05_1484 trpZ 3593206 SSU05_2184 trpS # RNA - T-box(Val) 3591470 SSU05_0457 SSU05_0457 3591471 SSU05_0458 SP_0567 3591472 SSU05_0459 valS # TF - NagR: SSU05_0874 3591647 SSU05_0634 nagB 3591562 SSU05_0549 glmS # TF - NrtR: SSU05_1971 3592993 SSU05_1974 nadR 3592992 SSU05_1973 nadR 3592991 SSU05_1972 pnuC 3592990 SSU05_1971 nrtR # TF - NanR: SSU05_1400 3592418 SSU05_1402 nanE 3592417 SSU05_1401 nanP # TF - CelQ: SSU05_0210, SSU05_0211 3591206 SSU05_0211 celQ 3591205 SSU05_0210 celQ 3591207 SSU05_0212 celB2 3591208 SSU05_0213 SP_0475 # TF - NrdR: SSU05_1730 3593140 SSU05_2118 nrdD 3593139 SSU05_2117 SDEG_2077 3593138 SSU05_2116 SSU05_2116 3593137 SSU05_2115 SAG2083 3593136 SSU05_2114 nrdG 3592222 SSU05_1206 ndrH 3592223 SSU05_1207 nrdE 3592224 SSU05_1208 SSU05_1208 3592225 SSU05_1209 nrdF # TF - CopR: SSU05_0113 3591110 SSU05_0113 copR 3591111 SSU05_0114 SSU05_0114 3591112 SSU05_0115 copZ # TF - ArgR: SSU05_0631, SSU05_2125, SSU05_1652 3592033 SSU05_1017 artP 3593148 SSU05_2126 argS 3593038 SSU05_2017 argG 3593037 SSU05_2016 argH 3591507 SSU05_0494 artQ 3591508 SSU05_0495 artQ 3591509 SSU05_0496 artM 3593147 SSU05_2125 argR1 3591637 SSU05_0624 arcA 3591638 SSU05_0625 yaaT 3591639 SSU05_0626 arcB 3591640 SSU05_0627 arcC 3591641 SSU05_0628 arcD 3591642 SSU05_0629 arcT # TF - MalR: SSU05_2137 3591397 SSU05_0396 rgfB 3591398 SSU05_0397 ptsG 3591399 SSU05_0398 ptsG 3593155 SSU05_2133 malX 3593156 SSU05_2134 malC 3593157 SSU05_2135 malD 3593158 SSU05_2136 malA 3593159 SSU05_2137 malR 3593160 SSU05_2138 pulA2 3593154 SSU05_2132 malM 3593153 SSU05_2131 malM 3591393 SSU05_0392 malM 3591394 SSU05_0393 null 3591395 SSU05_0394 malP # TF - GlnR: SSU05_0159 3592042 SSU05_1026 glnP 3592043 SSU05_1027 glnP 3592044 SSU05_1028 glnP 3592045 SSU05_1029 glnQ 3591156 SSU05_0159 glnR 3591157 SSU05_0160 glnA 3592221 SSU05_1205 citB 3592219 SSU05_1204 citZ 3592377 SSU05_1361 gluQ 3592378 SSU05_1362 gluH 3592379 SSU05_1363 gluM 3592380 SSU05_1364 gluM 3592381 SSU05_1365 gluP # TF - NmlR: SSU05_0503 3592405 SSU05_1388 adhC # TF - FabT: SSU05_1808 3592824 SSU05_1805 fabK 3592823 SSU05_1804 fabD 3592822 SSU05_1803 fabG 3592821 SSU05_1802 fabF 3592820 SSU05_1801 accB 3592819 SSU05_1800 fabZ 3592818 SSU05_1799 accC 3592817 SSU05_1798 accD 3592816 SSU05_1797 accD 3592815 SSU05_1796 accA 3592828 SSU05_1809 fabM 3592827 SSU05_1808 fabT 3592826 SSU05_1807 fabH 3592825 SSU05_1806 acpP # TF - ScrR: SSU05_1819 3592836 SSU05_1817 scrA 3592835 SSU05_1816 scrK 3592837 SSU05_1818 scrB 3592838 SSU05_1819 scrR # TF - CcpA: SSU05_1372 3592092 SSU05_1076 ldh 3591132 SSU05_0135 ackA 3591461 SSU05_0448 manR 3591643 SSU05_0630 hexB 3592327 SSU05_1311 SUB1370 3591361 SSU05_0360 galK 3591362 SSU05_0361 galT 3591254 SSU05_0259 drrA 3591253 SSU05_0258 drrA 3591252 SSU05_0257 drrB 3591251 SSU05_0256 drrC 3592389 SSU05_1373 pepQ 3591226 SSU05_0231 treP 3591225 SSU05_0230 treA 3592860 SSU05_1841 acoA 3592859 SSU05_1840 acoB 3591481 SSU05_0468 typA 3591556 SSU05_0543 pfk 3591557 SSU05_0544 pyk 3592593 SSU05_1574 rheA 3592797 SSU05_1778 manL 3592798 SSU05_1779 manM 3592799 SSU05_1780 manN 3592800 SSU05_1781 manO 3592237 SSU05_1221 hylD 3592236 SSU05_1220 ugl 3592235 SSU05_1219 hylE 3592234 SSU05_1218 hylF 3592233 SSU05_1217 hylG 3592232 SSU05_1216 yajC 3592231 SSU05_1215 hyl 3592230 SSU05_1214 hyl 3592229 SSU05_1213 hyl 3592228 SSU05_1212 hyl 3592241 SSU05_1225 kduD 3592240 SSU05_1224 kduI 3592239 SSU05_1223 kdgK 3592238 SSU05_1222 kdgA 3593155 SSU05_2133 malX 3593156 SSU05_2134 malC 3593157 SSU05_2135 malD 3593158 SSU05_2136 malA 3592836 SSU05_1817 scrA 3592835 SSU05_1816 scrK 3592076 SSU05_1060 yjbM 3592075 SSU05_1059 ppnK 3592074 SSU05_1058 yjbO 3593097 SSU05_2076 celR 3593096 SSU05_2075 celB2 3593095 SSU05_2074 celA2 3593094 SSU05_2073 celA2 3593093 SSU05_2072 SPy1322 3593092 SSU05_2071 celD2 3591206 SSU05_0211 celQ 3591205 SSU05_0210 celQ 3592176 SSU05_1160 eda2 3592175 SSU05_1159 uxaC 3592174 SSU05_1158 uxaC 3592173 SSU05_1157 uxuA 3592172 SSU05_1156 kduD 3591227 SSU05_0232 treR 3592657 SSU05_1638 gpmA 3591668 SSU05_0655 acuB 3591669 SSU05_0656 acuB 3591260 SSU05_0265 lrgA 3591261 SSU05_0266 lrgB 3591262 SSU05_0267 lrgB 3592577 SSU05_1558 msmE 3592576 SSU05_1557 msmF 3592575 SSU05_1556 msmG 3591440 SSU05_0439 raiA 3592976 SSU05_1957 dhaK 3592977 SSU05_1958 dhaL 3592978 SSU05_1959 dhaM 3592568 SSU05_1549 ydgE 3592567 SSU05_1548 livJ 3592566 SSU05_1547 livH 3592565 SSU05_1546 livM 3592564 SSU05_1545 livG 3592563 SSU05_1544 livG 3592562 SSU05_1543 livF 3592194 SSU05_1178 atpE 3592193 SSU05_1177 atpB 3592192 SSU05_1176 atpF 3592191 SSU05_1175 atpH 3592190 SSU05_1174 atpA 3592189 SSU05_1173 atpG 3592188 SSU05_1172 atpD 3592187 SSU05_1171 atpC 3591735 SSU05_0722 glpK 3591736 SSU05_0723 glpD 3591737 SSU05_0724 glpF 3592578 SSU05_1560 agaL 3591699 SSU05_0686 pgm 3591274 SSU05_0279 adhB1 3591462 SSU05_0449 bgaC 3591463 SSU05_0450 agaB 3591464 SSU05_0451 agaC 3591465 SSU05_0452 agaD 3591466 SSU05_0453 agaE 3591195 SSU05_0200 pfl 3591207 SSU05_0212 celZ2 3591208 SSU05_0213 SP_0475 3593154 SSU05_2132 malM 3593153 SSU05_2131 malM 3592462 SSU05_1444 malP 3592461 SSU05_1443 malP 3591393 SSU05_0392 malM 3591394 SSU05_0393 malM 3591395 SSU05_0394 malP 3592077 SSU05_1061 yjbK 3592078 SSU05_1062 yjbK 3592079 SSU05_1063 yjbK 3592080 SSU05_1064 yjbK 3592837 SSU05_1818 scrB 3592838 SSU05_1819 scrR 3591264 SSU05_0268 glpF2 3592029 SSU05_1013 glgC 3592030 SSU05_1014 glgD 3592031 SSU05_1015 glgA 3592032 SSU05_1016 glgB 3592217 SSU05_1201 ptsH 3592216 SSU05_1200 ptsI 3591838 SSU05_0822 fruR 3591839 SSU05_0823 fruB 3591840 SSU05_0824 fruA 3591841 SSU05_0825 fruA 3593072 SSU05_2051 pgi 3592686 SSU05_1667 pflA 3592509 SSU05_1491 licT 3592508 SSU05_1490 bglP 3592506 SSU05_1489 bglH 3591733 SSU05_0720 hcaD 3591734 SSU05_0721 hcaR 3591743 SSU05_0730 naoX 3591192 SSU05_0197 pepX 3591360 SSU05_0359 galR 3593084 SSU05_2063 sgaT 3593083 SSU05_2062 sgaB 3593082 SSU05_2061 sgaC 3593081 SSU05_2060 sgaH 3593080 SSU05_2059 sgaU 3593079 SSU05_2058 sgaE 3592418 SSU05_1402 nanE 3592417 SSU05_1401 nanP 3593165 SSU05_2143 yscN 3591323 SSU05_0328 ropA 3592520 SSU05_1503 eno 3591705 SSU05_0692 merA 3592183 SSU05_1167 uidB 3592182 SSU05_1166 uidB 3592181 SSU05_1165 uidB 3592180 SSU05_1164 kdgK2 3592179 SSU05_1163 uidA 3592178 SSU05_1162 uidR 3592177 SSU05_1161 uidR 3592208 SSU05_1192 rnc 3592207 SSU05_1191 rnc 3592206 SSU05_1190 yibB 3593086 SSU05_2065 pulA 3593085 SSU05_2064 pulA 3592356 SSU05_1340 susT1 3592355 SSU05_1339 susT2 3592354 SSU05_1338 susX 3592353 SSU05_1337 susH 3592055 SSU05_1039 lacT 3592054 SSU05_1038 lacF 3592053 SSU05_1037 lacE 3592052 SSU05_1036 lacG 3591637 SSU05_0624 arcA 3591638 SSU05_0625 SPy1546 3591639 SSU05_0626 arcB 3592104 SSU05_1088 coaA # TF - PflR: SSU05_0706 3591718 SSU05_0705 pflA 3591719 SSU05_0706 pflR 3591720 SSU05_0707 SPy2053 3591721 SSU05_0708 SPy2053 # TF - PipR: SSU05_0260 3591255 SSU05_0260 pipR 3591256 SSU05_0261 pip # TF - SgaR: SSU05_2056 3593084 SSU05_2063 sgaT 3593083 SSU05_2062 sgaB 3593082 SSU05_2061 sgaC 3593081 SSU05_2060 sgaH 3593080 SSU05_2059 sgaU 3593079 SSU05_2058 sgaE 3593078 SSU05_2057 SAG1816 3593077 SSU05_2056 sgaR 3593076 SSU05_2055 sgaG # TF - MtaR: SSU05_1012 3593047 SSU05_2026 mmuP 3593046 SSU05_2025 mmuP 3593045 SSU05_2024 mmuM 3592336 SSU05_1320 metE2 3592049 SSU05_1033 metY 3591523 SSU05_0510 COG1878 3592793 SSU05_1774 metE 3592794 SSU05_1775 metF # TF - YjdR: SSU05_2039 3593060 SSU05_2039 yjdR 3593059 SSU05_2038 ydaG 3593058 SSU05_2037 ydbA 3593057 SSU05_2036 ydbA # TF - PerR: SSU05_0310 3591305 SSU05_0310 perR 3592708 SSU05_1689 mgrA 3591304 SSU05_0309 pmtA 3592790 SSU05_1771 metQ 3592789 SSU05_1770 hmrB 3592788 SSU05_1769 metN 3592787 SSU05_1768 metP # TF - SPy1285: SSU05_0541 3591761 SSU05_0748 SAG0280 3591760 SSU05_0747 SAG0281 3591554 SSU05_0541 SPy1285 3591553 SSU05_0540 SPy1286 3591552 SSU05_0539 SPy1287 3591526 SSU05_0513 SPy0836 3591527 SSU05_0514 SPy0837 3591528 SSU05_0515 SPy0837 3591529 SSU05_0516 SPy0838 3591530 SSU05_0517 SPy0838 # TF - AdcR: SSU05_0109 3592553 SSU05_1535 rpsN2 3591106 SSU05_0109 adcR 3591107 SSU05_0110 adcC 3591108 SSU05_0111 adcB 3591109 SSU05_0112 adcA 3592283 SSU05_1267 inlA2 # TF - MntR: SSU05_2087 3591304 SSU05_0309 SPy1434 3593002 SSU05_1982 prtA # TF - PurR: SSU05_1988 3591009 SSU05_0026 purC 3591010 SSU05_0027 purL 3591011 SSU05_0028 purF 3591012 SSU05_0029 purM 3591013 SSU05_0030 purN 3591014 SSU05_0031 purN 3591015 SSU05_0032 purH 3591831 SSU05_0815 guaC 3591703 SSU05_0690 fhs 3591016 SSU05_0033 purD 3591017 SSU05_0034 purE 3591018 SSU05_0035 purK # TF - HrcA: SSU05_0298 3591293 SSU05_0298 hrcA 3591294 SSU05_0299 grpE 3591295 SSU05_0300 dnaK 3591144 SSU05_0147 groS 3591145 SSU05_0148 groL 3591146 SSU05_0149 groL # TF - RegR: SSU05_1210 3592241 SSU05_1225 kduD 3592240 SSU05_1224 kduI 3592239 SSU05_1223 kdgK 3592238 SSU05_1222 kdgA 3592237 SSU05_1221 hylD 3592236 SSU05_1220 ugl 3592235 SSU05_1219 hylE 3592234 SSU05_1218 hylF 3592233 SSU05_1217 hylG 3592232 SSU05_1216 yajC 3592231 SSU05_1215 hyl 3592230 SSU05_1214 hyl 3592229 SSU05_1213 hyl 3592228 SSU05_1212 hyl # TF - GalR: SSU05_0359 3591361 SSU05_0360 galK 3591362 SSU05_0361 galT 3591360 SSU05_0359 galR # TF - HomR 3592793 SSU05_1774 metE 3592794 SSU05_1775 metF # RNA - THF 3591133 SSU05_0136 folT 3591134 SSU05_0137 folC # TF - BirA: SSU05_1625 3591522 SSU05_0509 bioY # TF - BfrR: SSU05_1341 3592357 SSU05_1341 bfrR 3592356 SSU05_1340 bfrF 3592355 SSU05_1339 bfrG 3592354 SSU05_1338 bfrE 3592353 SSU05_1337 bfrA # TF - MdxR: SSU05_2066 3593087 SSU05_2066 mdxR 3593086 SSU05_2065 pulA 3593085 SSU05_2064 pulA # TF - SAG1910: SSU05_0608 3591531 SSU05_0518 SAG0731 3592971 SSU05_1952 ytjD # TF - CelR: SSU05_2076 3593100 SSU05_2079 celF 3593099 SSU05_2078 bglA 3593098 SSU05_2077 celO 3593097 SSU05_2076 celR 3593096 SSU05_2075 celB2 3593095 SSU05_2074 celA2 3593094 SSU05_2073 celA2 3593093 SSU05_2072 PF11687 3593092 SSU05_2071 celD2 # TF - SgaR2: SSU05_0187 3591184 SSU05_0187 sgaR2 3591185 SSU05_0188 sgaB2 3591186 SSU05_0189 sgaT2 # TF - CodY: SSU05_0350 3591118 SSU05_0121 rpoB 3591119 SSU05_0122 rpoC 3591247 SSU05_0252 gdhA 3591351 SSU05_0350 codY 3591352 SSU05_0351 pncA 3591678 SSU05_0665 serC 3591679 SSU05_0666 yesJ 3591680 SSU05_0667 serA 3591274 SSU05_0279 adhB1 3591276 SSU05_0281 thrC 3592907 SSU05_1888 ilvB 3592906 SSU05_1887 ilvN 3592905 SSU05_1886 ilvC 3592904 SSU05_1885 ilvA 3591818 SSU05_0801 hom 3591819 SSU05_0803 thrB 3591827 SSU05_0811 scpC 3591828 SSU05_0812 scpC 3592830 SSU05_1811 thrA 3592566 SSU05_1547 livH 3592565 SSU05_1546 livM 3592564 SSU05_1545 livG 3592563 SSU05_1544 livG 3592562 SSU05_1543 livF 3592567 SSU05_1548 livK 3591480 SSU05_0467 asnA 3591609 SSU05_0596 aroA 3591610 SSU05_0597 aroA 3591611 SSU05_0598 aroA 3591612 SSU05_0599 aroK 3591613 SSU05_0600 pheA 3591614 SSU05_0601 pheA # TF - FruR: SSU05_0822 3591838 SSU05_0822 fruR 3591839 SSU05_0823 fruB 3591840 SSU05_0824 fruA 3591841 SSU05_0825 fruA # TF - CtsR: SSU05_1976 3592570 SSU05_1551 clpP 3592569 SSU05_1550 clpP 3592995 SSU05_1976 ctsR 3592994 SSU05_1975 clpC 3591144 SSU05_0147 groS 3591145 SSU05_0148 groL 3591146 SSU05_0149 groL 3591390 SSU05_0389 clpL 3591391 SSU05_0390 clpL 3591392 SSU05_0391 clpL # TF - AgaR: SSU05_0448 3591461 SSU05_0448 agaR 3591462 SSU05_0449 bgaC 3591463 SSU05_0450 gadV 3591464 SSU05_0451 gadW 3591465 SSU05_0452 gadE 3591466 SSU05_0453 gadF # TF - AgaR2: SSU05_0447 3592275 SSU05_1259 agaA 3592274 SSU05_1258 agaY 3591190 SSU05_0195 agaS 3591461 SSU05_0448 agaR 3591462 SSU05_0449 bgaC 3591463 SSU05_0450 gadV 3591464 SSU05_0451 gadW 3591465 SSU05_0452 gadE 3591466 SSU05_0453 gadF # TF - LacR: SSU05_1045 3592061 SSU05_1045 lacR 3592060 SSU05_1044 SSU05_1044 3592059 SSU05_1043 lacA 3592058 SSU05_1042 lacB 3592057 SSU05_1041 lacC 3592056 SSU05_1040 lacD 3592055 SSU05_1039 lacT 3592054 SSU05_1038 lacF 3592053 SSU05_1037 lacE # TF - YwzG: SSU05_1131, SSU05_0264 3592147 SSU05_1131 ywzG 3592148 SSU05_1132 SSU05_1132 3592149 SSU05_1133 lp_3217 3592150 SSU05_1134 lp_3218 3591259 SSU05_0264 ywzG 3591258 SSU05_0263 lp_3217 3591257 SSU05_0262 lp_3218