# TF - VCA0673: VCA0673 56014 VCA0669 null 56016 VCA0671 VCA0671 56012 VCA0667 null 56011 VCA0666 sds 56018 VCA0673 VCA0673 # TF - TrpR: VC0701 54870 VC2283 COG0733 53775 VC1174 trpE 53774 VC1173 trpD_a 53773 VC1172 trpD_b 53772 VC1171 trpC 53771 VC1170 trpB 53770 VC1169 trpA # TF - FabR: VC0152 53643 VC1042 fadL 54080 VC1483 fabA 52655 VC0040 hyIII 55069 VC2484 lcfH # TF - BirA: VC0319 53713 VC1112 bioB 53714 VC1113 bioF 53715 VC1114 bioC 53716 VC1115 bioD 53712 VC1111 bioA # TF - HexR: VC1148 52946 VC0336 gpmM 55230 VC2646 ppc 53339 VC0734 aceB 54418 VC1828 ygaW 54866 VC2279 pepD 54959 VC2373 gltB 54960 VC2374 gltD 53749 VC1148 hexR 54590 VC2000 gapA 56383 VCA1045 mtlA 56384 VCA1046 mtlD 56385 VCA1047 mtlR 55909 VCA0563 pntA 55910 VCA0564 pntB 52984 VC0374 pgi 54459 VC1869 pflA 56369 VCA1029 glgX 54603 VC2013 ptsG 54947 VC2361 grcA # TF - ArgR: VC0431 56102 VCA0760 artP 56101 VCA0759 artI 56100 VCA0758 artQ 56099 VCA0757 artM 55228 VC2644 argC 55227 VC2643 argB 55226 VC2642 argG 55229 VC2645 argE 55202 VC2618 argD 55201 VC2617 astA 55200 VC2616 astD 54903 VC2316 argA 54976 VC2390 carA 54975 VC2389 carB 55093 VC2508 argF # TF - NrtR: VCA0097 55455 VCA0098 pncB 55454 VCA0097 nrtR # TF - NrdR: VC2272 55858 VCA0511 nrdD 55859 VCA0512 nrdG 53857 VC1256 nrdA 53856 VC1255 nrdB 53855 VC1254 yfaE # TF - Zur: VC0378 54670 VC2082 znuC 54671 VC2083 znuB 53864 VC1263 ribA 53481 VC0878 rpmE2 53482 VC0879 rpmJ2 54669 VC2081 znuA 55135 VC2551 VC2551 55136 VC2552 zbp 55135 VC2551 VC2551 55136 VC2552 zbp 55137 VC2553 VV1_0719 55138 VC2554 VC2554 55139 VC2555 VC2555 # TF - PdhR: VC2415 55001 VC2415 pdhR 55000 VC2414 aceE 54999 VC2413 aceF 54998 VC2412 lpdA # TF - FadR: VC1900 53644 VC1043 fadL 54080 VC1483 fabA 54583 VC1993 fadH 54693 VC2105 VC2105 54818 VC2231 fadE2 52708 VC0093 plsB 55340 VC2758 fadB 55341 VC2759 fadA # TF - NorR: VCA0182 54917 VC2330 nnrS 55539 VCA0183 hmp 55538 VCA0182 norR2 # TF - PrpR: VC1335 53935 VC1335 prpR 53936 VC1336 prpB 53937 VC1337 prpC 53938 VC1338 acnD 53939 VC1339 prpF 53940 VC1340 prpE # TF - HutC: VC1206 53806 VC1205 hutI 53805 VC1204 hutG2 53804 VC1203 hutU 53803 VC1202 hutH 53807 VC1206 hutC # TF - IscR: VC0747 55303 VC2720 nfuA 53352 VC0747 iscR 53353 VC0748 iscS 53354 VC0749 iscU 53355 VC0750 iscA 53356 VC0751 hscB 53357 VC0752 hscA 53358 VC0753 fdx 53359 VC0754 yfhJ 53232 VC0627 erpA # TF - NagC: VC0993 53754 VC1153 tfoX1 54590 VC2000 gapA 54591 VC2001 aldE 54947 VC2361 grcA 54185 VC1589 aldC 54186 VC1590 budB 54187 VC1591 VC1591 53674 VC1073 chiD 54804 VC2217 hex 53597 VC0995 nagE1 54603 VC2013 ptsG 55033 VC2448 pyrG 55032 VC2447 eno 53596 VC0994 nagA 53595 VC0993 nagC 53059 VC0449 mcp 56153 VCA0811 cbp 54314 VC1722 tfoX 53374 VC0769 chi 56043 VCA0700 chiD 54184 VC1588 alsR 53569 VC0966 ptsH 53568 VC0965 ptsI 53567 VC0964 crr 53575 VC0972 chiP 55384 VCA0027 chiA 56365 VCA1025 nagB # TF - NtrC: VC2749 53212 VC0606 glnK 55330 VC2748 ntrB 55331 VC2749 ntrC 55328 VC2746 glnA # TF - Fur: VC2106 56250 VCA0909 hutW 56249 VCA0908 huvX 56248 VCA0907 hutZ 52706 VC0091 COG3315 54796 VC2209 vibF 55278 VC2694 sodA 53611 VC1009 PF10952 53085 VC0475 irgA 53380 VC0775 vibH 55922 VCA0576 null 53376 VC0771 VC0771 54797 VC2210 viuB 53378 VC0773 VC0773 53377 VC0772 VC0772 54666 VC2078 feoA 54665 VC2077 feoB 54664 VC2076 feoC 52813 VC0200 fhuA 52814 VC0201 fhuC 52815 VC0202 fhuD 52816 VC0203 fhuB 53865 VC1264 irpA 54279 VC1687 ppaC 53480 VC0877 null 53479 VC0876 null 55582 VCA0227 vctP 55583 VCA0228 vctD 55584 VCA0229 vctB 55585 VCA0230 vctC 55420 VCA0063 ptrB 55421 VCA0064 hutR 55422 VCA0065 VCA0065 55423 VCA0066 VCA0066 55424 VCA0067 VCA0067 55921 VCA0575 VCA0575 54168 VC1572 VC1572 54169 VC1573 fumC 52689 VC0074 VC0074 56251 VCA0910 tonB-hmu 56252 VCA0911 exbB-hmu 56253 VCA0912 exbD-hmu 56254 VCA0913 hmuT 56255 VCA0914 hmuU 56256 VCA0915 hmuV 54144 VC1548 PF11932 54143 VC1547 exbB1 54142 VC1546 exbB2 54140 VC1544 tonB 54139 VC1543 VC1543 53381 VC0776 viuP 53382 VC0777 viuD 53383 VC0778 viuG 53213 VC0608 fbpA 53214 VC0609 fbpB 53215 VC0610 fbpC 53379 VC0774 VC0774 55425 VCA0068 torS 53084 VC0474 irgB 52974 VC0364 bfd 52975 VC0365 bfr 54280 VC1688 PF11449 54798 VC2211 viuA 56379 VCA1041 VCA1041 # TF - FruR: VCA0519 55866 VCA0519 fruR 55865 VCA0518 fruB 55864 VCA0517 fruK 55863 VCA0516 fruA # TF - PurR: VC1721 55959 VCA0614 fhs 53373 VC0768 guaA 53791 VC1190 purC 52667 VC0052 purE 52666 VC0051 purK 54813 VC2226 purM 54814 VC2227 purN 55295 VC2712 xanP 53730 VC1129 gsk 54761 VC2174 ushA 52888 VC0276 purH 52887 VC0275 purD 53472 VC0869 purL 53829 VC1228 purT 54812 VC2225 upp 54532 VC1942 folD 53605 VC1003 cvpA 53606 VC1004 purF 53544 VC0941 glyA # TF - RbsR: VCA0132 55484 VCA0127 rbsD 55485 VCA0128 rbsA 55486 VCA0129 rbsC 55487 VCA0130 rbsB 55488 VCA0131 rbsK 55489 VCA0132 rbsR # TF - NanR (SiaQ): VC1775 54370 VC1779 siaP 54369 VC1778 siaS 54368 VC1777 siaT 54367 VC1776 nanA 54366 VC1775 nanR 54365 VC1774 nanM 54364 VC1773 nanM 54372 VC1781 nanE 54373 VC1782 nanK 54374 VC1783 nagA # TF - LexA: VC0092 52707 VC0092 lexA 53150 VC0543 recA 53151 VC0544 recX 53455 VC0852 recN 54874 VC2287 dinB 54633 VC2043 topB 53792 VC1191 VC1191 55643 VCA0291 intIA 53968 VC1368 VC1368 55294 VC2711 recG 53273 VC0668 mutH 52697 VC0082 rmuC 54436 VC1846 ruvA 54435 VC1845 ruvB 53004 VC0394 uvrA 52803 VC0190 uvrD 54913 VC2326 yebG 54062 VC1463 rstA 54061 VC1462 rstB 54053 VC1454 null 54052 VC1453 null # TF - PsrA: VC1741 54583 VC1993 fadH 55340 VC2758 fadB 55341 VC2759 fadA 53647 VC1046 fadI 53648 VC1047 fadJ 54333 VC1741 psrA 54332 VC1740 fadE 53339 VC0734 mdh 54575 VC1985 fadD # TF - PhnR: VCA0600 55949 VCA0604 phnW 55950 VCA0605 COG0160 55951 VCA0606 phnX 55947 VCA0602 phnT 55946 VCA0601 phnU 55945 VCA0600 phnR 55944 VCA0599 VCA0599 55948 VCA0603 phnS # TF - TreR: VC0909 53513 VC0910 treB 53514 VC0911 treC # RNA - mini-ykkC 53993 VC1393 ykkC # RNA - MOCO_RNA_motif 53625 VC1024 moaA 53626 VC1025 moaB 53627 VC1026 moaC 53628 VC1027 moaD 53629 VC1028 moaE # RNA - FMN 56398 VCA1060 ribB # RNA - Trp_leader 53775 VC1174 trpE 53774 VC1173 trpG 53773 VC1172 trpD 53772 VC1171 trpC 53771 VC1170 trpB 53770 VC1169 trpA # RNA - yybP-ykoY 52637 VC0022 COG2119 55892 VCA0546 ykoY # RNA - Lysine 53001 VC0391 lysC 53732 VC1131 lysW 55568 VCA0213 lysW2 # RNA - Leu_leader 55075 VC2490 leuA 55076 VC2491 leuB 55077 VC2492 leuC 55078 VC2493 leuD # RNA - TPP 55123 VC2539 thiB 55122 VC2538 thiP 55121 VC2537 thiQ 52676 VC0061 thiC 52677 VC0062 thiE 52678 VC0063 thiF 52679 VC0064 thiS 52680 VC0065 thiG 52681 VC0066 thiH 53897 VC1296 thiD # RNA - GEMM_RNA_motif 56153 VCA0811 cbp 54314 VC1722 tfoX # RNA - S15 53251 VC0646 rpsO # RNA - Glycine 54021 VC1422 glyP # RNA - ykoK 54248 VC1655 mgtE # RNA - Thr_leader 54950 VC2364 thrA 54949 VC2363 thrB 54948 VC2362 thrC # RNA - Cobalamin 52769 VC0156 btuB # RNA - His_leader 53733 VC1132 hisG 53734 VC1133 hisD 53735 VC1134 hisC 53736 VC1135 hisB 53737 VC1136 hisH 53738 VC1137 hisA 53739 VC1138 hisF 53740 VC1139 hisI # TF - NarP 53625 VC1024 moaA 53626 VC1025 moaB 53627 VC1026 moaC 53628 VC1027 moaD 53629 VC1028 moaE 56019 VCA0675 narQ 54623 VC2033 adhE 55240 VC2656 frdA 55241 VC2657 frdB 55242 VC2658 frdC 55243 VC2659 frdD 54033 VC1434 fnr 56020 VCA0676 napF 56021 VCA0677 napD 56022 VCA0678 napA 56023 VCA0679 napB 56024 VCA0680 napC 54541 VC1951 torY 54540 VC1950 torZ 54645 VC2057 ccmA 54644 VC2056 ccmB 54643 VC2055 ccmC 54642 VC2054 ccmD 54641 VC2053 ccmE 54640 VC2052 ccmF 54639 VC2051 ccmG # TF - GntR: VC0289 52900 VC0289 gntR 52897 VC0286 gntU 52896 VC0285 eda 52898 VC0287 gntK 52899 VC0288 edd # TF - SoxR: VCA0084 55441 VCA0084 soxR 55442 VCA0085 PF07690 # TF - ZntR: VC0277 53634 VC1033 zntA # TF - CueR: VC0974 54802 VC2215 copA 54803 VC2216 copG 55616 VCA0262 VCA0262 # TF - MetJ: VC2682 55269 VC2685 metF 55267 VC2683 metB 55268 VC2684 metL 53510 VC0907 metN 53509 VC0906 metI 53508 VC0905 metQ 55549 VCA0193 metT 53000 VC0390 metH 55266 VC2682 metJ 53785 VC1184 csd 54207 VC1611 metA 54298 VC1706 metR 53082 VC0472 metK 54296 VC1704 metE # TF - ScrR: VCA0654 55998 VCA0653 scrA 55999 VCA0654 scrR 56000 VCA0655 scrB 56001 VCA0656 scrK # TF - GalR: VC2337 54924 VC2337 galR 53925 VC1325 mglB 54192 VC1596 galT 54191 VC1595 galK 54190 VC1594 galM # TF - CelR: VC1286 53881 VC1280 celG 53882 VC1281 celB 53883 VC1282 celD 53884 VC1283 celA 53885 VC1284 bglA 53886 VC1285 celE 53887 VC1286 celR # TF - CelR2: VC1557 54154 VC1558 bglA 54153 VC1557 celR2 # TF - MetR: VC1706 54296 VC1704 metE 55269 VC2685 metF 53544 VC0941 glyA 54297 VC1705 null 54298 VC1706 metR # TF - TyrR: VC1308 54261 VC1669 COG0733 56114 VCA0772 tyrP 56170 VCA0828 phhA 56169 VCA0827 phhB 56171 VCA0829 acsA 53944 VC1344 hpd 53945 VC1345 hmgA 53946 VC1346 hmgC 53947 VC1347 hmgB 53300 VC0695 aroF 53301 VC0696 tyrA # TF - YdcR: VCA0871 56214 VCA0872 PF01654 56215 VCA0873 PF02322 # TF - SdaR: VCA0905 56245 VCA0904 grtP 56244 VCA0903 garK # TF - PhrR: VCA0056 55412 VCA0055 COG3272 55413 VCA0056 phrR 55414 VCA0057 phr 55415 VCA0058 ykuD 53719 VC1118 PF07366 53720 VC1119 PF00106 53721 VC1120 PF01593 53722 VC1121 PF07103 53723 VC1122 PF02353 53724 VC1123 PF11086 53725 VC1124 FIG026291 53726 VC1125 FIG002577