# TF - NadQ: bll2550 317753 bll2542 nadA 317752 bll2541 nadB 317751 bll2540 nadC # TF - NrdR: bll5032 319485 bll4274 nrdJ 315218 bll0007 nrdA 315217 bll0006 nrdB # TF - NikR: bll0699 322160 bll6949 hoxN 322159 bll6948 omp_Ni 322121 bll6910 hoxN # TF - Zur: blr0934 317672 bll2461 PF11162 317671 bll2460 omr 322982 bll7771 znuC 322981 bll7770 znuB 322980 bll7769 znuA 322979 bll7768 yciC 322978 bll7767 PF00400 # TF - NnrR: blr7084 321433 bll6222 PF01152 318422 bsl3211 null 322298 bsr7087 null 322299 blr7088 PF04314 322300 blr7089 nirK 322301 blr7090 nirV 322294 bll7083 nnrS 318423 blr3212 norE 318424 bsr3213 norF 322839 bll7628 nnrX 322838 bll7627 PF01136 322837 bll7626 PF01136 322840 blr7629 ubiD 322841 blr7630 ubiX 322295 blr7084 nnrR 315525 blr0314 nosR 322297 bll7086 hemN 322296 bsl7085 PF08984 317218 bll2007 hemN1 318425 blr3214 norC 318426 blr3215 norB 318427 blr3216 norQ 318428 blr3217 norD # TF - HutC: blr6245 321455 blr6244 hutF 321456 blr6245 hutC 321457 blr6246 hisX 321458 blr6247 hisY 321459 blr6248 hisZ 321454 bll6243 hutI 321453 bll6242 hutH 321452 bll6241 hutU # TF - Irr: blr1216, bll0768 321891 bll6680 bfr 323106 blr7895 mbfA 317948 bll2737 coxS 317947 bll2736 coxL 323179 bll7968 fhuA3 323178 bll7967 piuB 321733 bsr6522 null 321734 blr6523 null 322288 blr7077 hmuT 322289 blr7078 hmuU 322290 blr7079 hmuV 322287 bll7076 hmuR 321892 bsl6681 bfd 319715 blr4504 fhuA1 321007 bll5796 fumA 319115 blr3904 fiu 319116 blr3905 piuC 319117 blr3906 exbB2 319118 blr3907 exbD2 319119 blr3908 tonB2 # TF - NtrC: blr4488 319782 bll4571 nirA 319781 bll4570 nasB2 316659 blr1448 urtA 316660 blr1449 urtB 316661 blr1450 urtC 316662 blr1451 urtD 316663 blr1452 urtE 316664 blr1453 ureD 316665 blr1454 ureA 316666 blr1455 ureB 316667 blr1456 null 316668 blr1457 ureC 320159 blr4948 glnB 320160 blr4949 glnA 315823 blr0612 glnK 315824 blr0613 amtB 316247 blr1036 dppA 316248 blr1037 dppB 316249 blr1038 dppC 316250 blr1039 dppDE 318017 blr2806 narK 318018 blr2807 hmp 318019 blr2808 nasB 318020 blr2809 nasA # TF - Mur: bll0797 315306 blr0095 null 320255 bll5044 mntH 315979 bll0768 irr1 # TF - LexA: blr4826 320037 blr4826 lexA 319913 blr4702 uvrA 317730 blr2519 PF04055 320966 bll5755 recA 319972 blr4761 xthA 322677 blr7466 rna 318235 blr3024 imuA 318236 blr3025 imuB 318237 blr3026 dnaE2 316746 blr1535 ruvC 316747 blr1536 ruvA 316748 blr1537 ruvB 315872 bll0661 yifB 323321 blr8110 rmuC 319909 bll4698 ssb # TF - NifA: blr2037 317248 blr2037 nifA 317271 bll2060 groES3 317270 bll2059 groEL 316954 blr1743 nifD 316955 blr1744 nifK 316956 blr1745 nifE 316957 blr1746 nifN 316958 blr1747 nifX 316959 blr1748 PF03270 316960 bsr1749 PF05082 316961 bsr1750 fdxB 316966 blr1755 iscN 316982 blr1771 nifW 317355 blr2144 cpxP 317356 blr2145 cpxR 317354 blr2143 cpx1 316931 blr1720 hupS 316932 blr1721 hupL 316933 blr1722 hupC 317094 blr1883 rpoN 316286 bll1075 fdxN 317247 blr2036 fixR 322162 blr6951 modA 322163 blr6952 modB 322164 blr6953 modC 316930 blr1719 modB # TF - PsrA: blr5456 320667 blr5456 psrA 320666 bll5455 acdH # TF - XylR: bll2268 317480 blr2269 xylF2 317481 blr2270 xylG2 317482 blr2271 xylH2 317479 bll2268 xylR # TF - VanR: blr2391 317601 blr2390 vanA 317602 blr2391 vanR 317603 blr2392 null # TF - PhnF: bll1220 316432 blr1221 phnG 316433 blr1222 phnH 316434 blr1223 phnI 316435 blr1224 phnJ 316436 blr1225 phnK 316437 blr1226 phnL 316438 blr1227 phnM 316439 blr1228 phnN 316431 bll1220 phnF # RNA - Cobalamin 317279 blr2068 (EC 2.1.1.14) 318472 blr3262 cfrX 318473 blr3261 cobW 318474 blr3263 cobN 318475 blr3264 cobG 318476 blr3265 cbiC 318477 blr3266 cbiL 318478 blr3267 cbiH 318485 blr3274 cbtC 318486 blr3275 cobF 318487 blr3276 cobT 319977 bll4766 btuB 318489 blr3278 btuB2 318490 blr3279 btuB2 318491 blr3280 btuN # RNA - FMN 322663 bll7452 ribH2 # RNA - TPP 321866 blr6655 thiO 321867 bsr6656 thiS 321868 blr6657 thiG 321869 blr6658 thiE # RNA - serC 322613 bll7402 serC 322612 bll7401 serA # RNA - Glycine 320962 blr5751 gcvT 320963 blr5752 gcvH 320964 blr5753 gcvP # RNA - SAM_alpha 316610 blr1399 metX 316611 blr1400 metW 316316 bll1105 metY # TF - HrcA: blr0675 322743 bsr7532 groS 322744 blr7533 groL 322189 blr6978 groS 322190 blr6979 groL 320836 blr5625 groS 320837 blr5626 groL 320437 blr5226 groS # TF - NmlR: bll4578 319789 bll4578 nmlR 319788 bsl4577 pcaC # TF - BioR: bll2094 317306 blr2095 bioB 317307 blr2096 panD 317308 blr2097 bioF 317309 blr2098 bioD 317310 blr2099 bioA 317305 bll2094 bioR # TF - XylR: blr1118 316329 blr1118 xylR 316330 blr1119 xylB 316331 blr1120 xylA 316332 blr1121 xylG 316333 blr1122 xylH 316334 blr1123 xylF # TF - Atu5239: bll3974 319192 bll3981 dsd 319191 bll3980 null 319190 bll3979 null 319189 bll3978 null 319188 bll3977 null 319187 bll3976 COG0251 319186 bll3975 COG3608 319185 bll3974 Atu5239 # TF - Mll1683: bll3916 319127 bll3916 mll1683 319126 bll3915 COG0129 319125 bll3914 COG4221 319124 bll3913 COG1028 319128 blr3917 blr3917 319129 blr3918 blr3918 319130 blr3919 blr3919 319131 blr3920 blr3920 319132 blr3921 blr3921 # TF - blr3394: blr3394 318600 blr3389 blr3389 318601 blr3390 blr3390 318602 blr3391 blr3391 318603 blr3392 COG0673 318604 blr3393 COG3828 318605 blr3394 blr3394 # TF - SMb20039: blr0404 315614 bll0403 COG697 # TF - PdxQ3: blr5860 321070 bll5859 COG5457 # TF - Blr6977: blr6977 322187 bll6976 COG1917 # TF - Bll4368: bll4368, blr6040 321252 blr6041 dld2 321253 blr6042 AZC_4683 321251 blr6040 Bll4368 321250 bll6039 sgaA 321249 bll6038 bll6038 321248 bll6037 null 321247 bll6036 null 319580 blr4369 null 319581 blr4370 null 319582 blr4371 tctC 319583 blr4372 tctB 319584 blr4373 tctA 319585 blr4374 blr4374 319579 bll4368 Bll4368 # TF - PdxW: bll4154 319366 blr4155 pdxO # TF - Mll2434: blr2901 318111 bll2900 PF00892 # TF - UxuR2: bll6835, bll3929 319140 bll3929 uxuR2-3 319141 blr3930 null 319142 blr3931 null 319143 blr3932 blr3932 322047 blr6836 uxuB 322046 bll6835 uxuR2 322045 bll6834 dctP 322044 bll6833 dctQ 322043 bll6832 dctM 322042 bll6831 idnD 322041 bll6830 uxuA2 # TF - MdcY: blr1279 316487 bll1276 mdcA 316488 blr1277 mdcL 316489 blr1278 mdcM 316490 blr1279 mdcY 315480 bll0269 mdcC 315479 bll0268 mdcD 315478 bll0267 mdcE 315477 bll0266 mdcG 315476 bll0265 mdcB 315475 bll0264 mdcF 315474 bll0263 null # TF - FnrN/FixK/AadR: bll2757, bll7696, bll2109, bll3466, bll6061 317974 blr2763 ccoN 317975 blr2764 ccoO 317976 bsr2765 ccoQ 317977 blr2766 ccoP 323172 blr7961 hspC2 319848 blr4637 hspC2 319209 bll3998 attK 317978 blr2767 ccoG 317979 blr2768 ccoH 317980 blr2769 ccoI 317981 bsr2770 ccoS 321281 blr6070 adhP 321282 blr6071 COG2187 321273 blr6062 blr6062 321272 bll6061 aadR 322247 bsr7036 napE 322248 blr7037 napD 322249 blr7038 napA 322250 blr7039 napB 322251 blr7040 napC 320866 bll5655 adhA 316522 blr1311 ompW 316977 bll1766 ompW 319866 blr4655 ppsA 315525 blr0314 nosR 318732 blr3521 null 317969 bll2758 bll2758 321284 bll6073 phbC 322300 blr7089 nirK 322301 blr7090 nirV 316411 bll1200 hemA 322297 bll7086 hemN 318284 bsr3073 bsr3073 # TF - GulR: blr5870 315579 blr0368 uxuF 321082 blr5871 kdgD 321083 blr5872 gudD 321084 blr5873 kgsD 321085 blr5874 garD 321081 blr5870 gulR 321080 blr5869 gudP 321762 bll6551 uxuP2 321761 bll6550 uxuQM # TF - FixJ: bll2760 317968 bll2757 fixK # TF - Bll2166: bll2166 317378 blr2167 blr2167 317379 blr2168 tktA 317380 blr2169 tktB 317381 blr2170 blr2170 317382 blr2171 blr2171 317377 bll2166 bll2166