# TF - ZntR: Sden_3408 6911862 Sden_3408 zntR 6911863 Sden_3409 PF03773 # TF - TyrR: Sden_2593 6911035 Sden_2593 tyrR 6910357 Sden_1943 ivdA 6910356 Sden_1942 ivdB 6910355 Sden_1941 ivdC 6910354 Sden_1940 ivdD 6910353 Sden_1939 ivdE 6910352 Sden_1938 ivdF 6910351 Sden_1937 ivdG 6910661 Sden_2244 liuR 6910662 Sden_2245 liuA 6910663 Sden_2246 liuB 6910664 Sden_2247 liuC 6910665 Sden_2248 liuD 6910666 Sden_2249 null 6910667 Sden_2250 liuE 6910668 Sden_2251 liuF 6910669 Sden_2252 liuG 6909392 Sden_1016 pep1 6909112 Sden_0746 brnQ 6910154 Sden_1751 aroA 6911034 Sden_2592 hmgC 6911033 Sden_2591 hmgB 6911911 Sden_3451 tdo 6911912 Sden_3452 kyn 6910153 Sden_1750 tyrB 6911381 Sden_2931 omp2 6909760 Sden_1376 ipdC 6909804 Sden_1409 aprE 6910949 Sden_2521 mdeA 6909465 Sden_1089 pep3 6910190 Sden_1786 bkdA1 6910191 Sden_1787 bkdA2 6910192 Sden_1788 bkdB 6911037 Sden_2595 phhA 6911036 Sden_2594 phhB 6909628 Sden_1245 aceB 6909629 Sden_1246 aceA 6910231 Sden_1823 ldh # TF - TrpR: Sden_2743 6911194 Sden_2750 aroF 6911193 Sden_2749 tyrA 6911187 Sden_2743 trpR # TF - SoxR: Sden_2125 6910542 Sden_2125 soxR 6909011 Sden_0647 Sden_0647 6910541 Sden_2124 PF00903 # TF - SO4705: Sden_0218 6908564 Sden_0217 SO4706 6908565 Sden_0218 SO4705 # TF - SO4468: Sden_1388 6909777 Sden_1388 SO4468 6909776 Sden_1387 Sden_1387 6909775 Sden_1386 Sbal_0270 6909774 Sden_1385 Sbal_0269 # TF - SO3494: Sden_3078 6911530 Sden_3079 mexE 6911531 Sden_3080 mexF # TF - SO3393: Sden_1229 6909612 Sden_1230 SO3392 6909611 Sden_1229 SO3393 # TF - SO3277: Sden_1279 6909661 Sden_1278 SO3278 6909660 Sden_1277 SO3279 6909662 Sden_1279 SO3277 # TF - SO1703: Sden_2204 6910621 Sden_2204 SO1703 6910622 Sden_2205 Shew_3566 6910623 Sden_2206 Sden_2206 # TF - SO0072: Sden_0069 6908412 Sden_0068 PF00561 6908411 Sden_0067 COG4555 6908410 Sden_0066 COG1668 6908409 Sden_0065 SO0068 6908413 Sden_0069 SO0072 6908414 Sden_0070 SO0073 6908415 Sden_0071 SO0074 # TF - PUR 6909652 Sden_1269 guaB 6909653 Sden_1270 guaA 6910511 Sden_2094 purM 6910512 Sden_2095 purN # TF - PsrA: Sden_2116 6910533 Sden_2116 psrA 6910532 Sden_2115 fadE1 6910167 Sden_1764 fadE2 6909326 Sden_0953 Sbal_0657 6908418 Sden_0074 SO0080 6910164 Sden_1761 acdH 6911683 Sden_3229 echH 6910604 Sden_2187 sdhC 6910603 Sden_2186 sdhD 6910602 Sden_2185 sdhA 6910601 Sden_2184 sdhB 6910606 Sden_2189 gltA 6910981 Sden_2539 etfB 6910980 Sden_2538 etfA 6910313 Sden_1900 fadH 6909628 Sden_1245 aceB 6909629 Sden_1246 aceA 6910898 Sden_2473 SO2935 6908356 Sden_0015 fadB 6908355 Sden_0014 fadA 6909927 Sden_1529 fadI 6909928 Sden_1530 fadJ 6910025 Sden_1625 fadD1 # TF - PrpR: Sden_1663 6910064 Sden_1663 prpR 6910065 Sden_1664 prpB 6910066 Sden_1665 prpC 6910067 Sden_1666 acnD 6910068 Sden_1667 prpF # TF - PdhR: Sden_3384 6910828 Sden_2405 pflX 6911838 Sden_3384 pdhR 6911837 Sden_3383 aceE 6911836 Sden_3382 aceF 6911835 Sden_3381 lpdA 6910829 Sden_2406 pflB 6910830 Sden_2407 pflA 6909628 Sden_1245 aceB 6909629 Sden_1246 aceA # TF - NtrC: Sden_3458 6911917 Sden_3457 ntrB 6911918 Sden_3458 ntrC 6911914 Sden_3454 glnA 6911355 Sden_2905 glnB 6911354 Sden_2904 amtB # TF - NsrR: Sden_3702 6911282 Sden_2837 nnrS2 # TF - NrdR: Sden_1143 6909814 Sden_1419 nrdD 6909815 Sden_1420 nrdG 6910366 Sden_1952 nrdA 6910367 Sden_1953 nrdB 6910368 Sden_1954 SO2417 # TF - NhaR: Sden_2776 6911222 Sden_2778 nhaA 6911221 Sden_2777 SO1337 6911220 Sden_2776 nhaR # TF - NagR: Sden_2709 6910553 Sden_2136 chiA 6908917 Sden_0553 hex 6911152 Sden_2708 omp_nag 6911151 Sden_2707 trpX 6909406 Sden_1030 cbp 6911153 Sden_2709 nagR 6911146 Sden_2702 nagP 6911150 Sden_2706 nagK 6911149 Sden_2705 nagB2 6911148 Sden_2704 nagA 6911147 Sden_2703 nagX # TF - MalR: Sden_1820 6910445 Sden_2028 malZ 6910444 Sden_2027 glcP 6910446 Sden_2029 omp(Mal) 6910447 Sden_2030 trpH 6910448 Sden_2031 susA 6910449 Sden_2032 amy2 6910417 Sden_2003 malT 6910418 Sden_2004 cga 6910207 Sden_1800 amyA 6910416 Sden_2002 susB # TF - LiuR: Sden_2244 6910231 Sden_1823 ldh 6911234 Sden_2790 gltB 6911235 Sden_2791 gltD 6909628 Sden_1245 aceB 6909629 Sden_1246 null 6911184 Sden_2740 thrA 6911183 Sden_2739 thrB 6911182 Sden_2738 thrC 6910661 Sden_2244 liuR 6910662 Sden_2245 liuA 6910663 Sden_2246 liuB 6910664 Sden_2247 liuC 6910665 Sden_2248 liuD 6910666 Sden_2249 liuD 6910667 Sden_2250 liuE 6910668 Sden_2251 liuF 6910669 Sden_2252 liuG 6910357 Sden_1943 ivdA 6910356 Sden_1942 ivdB 6910355 Sden_1941 ivdC 6910354 Sden_1940 ivdD 6910353 Sden_1939 ivdE 6910352 Sden_1938 ivdF 6910351 Sden_1937 ivdG 6910981 Sden_2539 etfB 6910980 Sden_2538 etfA 6910190 Sden_1786 bkdA1 6910191 Sden_1787 bkdA2 6910192 Sden_1788 bkdB # TF - IscR: Sden_1457 6911988 Sden_3528 nfuA 6911259 Sden_2815 erpA 6909855 Sden_1457 iscR 6909856 Sden_1458 iscS 6909857 Sden_1459 iscU 6909858 Sden_1460 iscA 6909859 Sden_1461 hscB 6909860 Sden_1462 hscA 6909861 Sden_1463 fdx # TF - IlvY: Sden_3416 6911869 Sden_3415 ilvC 6911870 Sden_3416 ilvY # TF - HypR: Sden_1382 6909261 Sden_0888 prdP 6909054 Sden_0689 putA # TF - HutC: Sden_0082 6908425 Sden_0081 hutI 6908426 Sden_0082 hutC 6908427 Sden_0083 hutU 6908428 Sden_0084 hutH # TF - HmgQ: Sden_2161 6910579 Sden_2162 hmgA 6910580 Sden_2163 hpd 6910578 Sden_2161 hmgQ # TF - HexR: Sden_2080 6910195 Sden_1791 gapA2 6909399 Sden_1023 nupC 6909628 Sden_1245 aceB 6909629 Sden_1246 aceA 6910497 Sden_2080 hexR 6910496 Sden_2079 zwf 6910495 Sden_2078 pgl 6910494 Sden_2077 edd 6910493 Sden_2076 eda 6911175 Sden_2731 phk 6911178 Sden_2734 tal 6911179 Sden_2735 pgi 6910423 Sden_2009 ppsA 6910197 Sden_1793 gapB 6910414 Sden_2000 adhE 6910705 Sden_2288 cdd 6910498 Sden_2081 pykA # TF - GlmR: Sden_3744 6912212 Sden_3744 glmR 6912211 Sden_3743 glmS # TF - GcvA: Sden_2565 6910360 Sden_1946 sdaA 6909206 Sden_0833 gcvT 6909207 Sden_0834 gcvH 6909208 Sden_0835 gcvP 6911007 Sden_2565 gcvA 6911006 Sden_2564 null 6912078 Sden_3615 kbl 6912079 Sden_3616 tdh # TF - FadR: Sden_1635 6909927 Sden_1529 fadI 6909928 Sden_1530 fadJ 6909809 Sden_1414 fadL 6908897 Sden_0534 SO0572 6910035 Sden_1635 fadR 6910167 Sden_1764 fadE # TF - FabR: Sden_0230 6908576 Sden_0229 OLE1 6908416 Sden_0072 lcfE 6908893 Sden_0530 plsC 6908894 Sden_0531 rraB 6908577 Sden_0230 fabR 6910890 Sden_2465 fabA 6910171 Sden_1768 hylII # TF - Dnr: Sden_3444 6910637 Sden_2220 nosR 6910636 Sden_2219 nosZ 6910635 Sden_2218 nosD 6910634 Sden_2217 nosF 6910633 Sden_2216 nosY 6910632 Sden_2215 nosL 6911942 Sden_3482 nirK 6911941 Sden_3481 Sden_3481 6911940 Sden_3480 sco 6911939 Sden_3479 cox # TF - CueR: Sden_3690 6912154 Sden_3691 copA 6912153 Sden_3690 cueR # TF - CalR: Sden_0974 6909348 Sden_0975 calB 6909347 Sden_0974 calR # TF - BirA: Sden_0154 6910058 Sden_1657 bioA 6910059 Sden_1658 bioB 6910060 Sden_1659 bioF 6910061 Sden_1660 bioC 6910062 Sden_1661 bioD # TF - BglR: Sden_2609 6911049 Sden_2607 bglA1 6911050 Sden_2608 bglT 6911051 Sden_2609 bglR 6911048 Sden_2606 glcP 6911047 Sden_2605 bglA2 6911046 Sden_2604 lamA 6911052 Sden_2610 null # TF - BetI: Sden_0713 6909078 Sden_0713 betI 6909079 Sden_0714 betB 6909080 Sden_0715 betA 6909081 Sden_0716 betT # TF - ArgR: Sden_0825 6911644 Sden_3193 astC 6911643 Sden_3192 astA 6911642 Sden_3191 astD 6909413 Sden_1037 argW 6910747 Sden_2329 astB 6908604 Sden_0250 argC 6909612 Sden_1230 SO3392 6911481 Sden_3031 potF 6911480 Sden_3030 potG 6911479 Sden_3029 potH 6911478 Sden_3028 potI 6909471 Sden_1095 pbpG 6911234 Sden_2790 gltB 6911235 Sden_2791 gltD 6909527 Sden_1151 recN 6909198 Sden_0825 argR 6908684 Sden_0329 argA 6911868 Sden_3414 ilvG 6911867 Sden_3413 ilvM 6911866 Sden_3412 ilvD 6911865 Sden_3411 ilvA 6908605 Sden_0251 argB 6908606 Sden_0252 argF 6908607 Sden_0253 argG 6908608 Sden_0254 argH # TF - MetR: Sden_0731 6909354 Sden_0981 luxS 6909097 Sden_0731 metR 6909098 Sden_0732 metE 6910949 Sden_2521 mdeA 6910539 Sden_2122 ilvI 6910540 Sden_2123 ilvH # TF - LexA: Sden_3515 6909527 Sden_1151 recN 6909584 Sden_1208 recA 6911975 Sden_3515 lexA 6911976 Sden_3516 sulA 6910852 Sden_2429 dinG 6910853 Sden_2430 SO1818 6910854 Sden_2431 SO1817 6910823 Sden_2400 topB 6910122 Sden_1719 yebG 6910123 Sden_1720 yebR 6909561 Sden_1185 dinB 6911936 Sden_3476 recG 6911690 Sden_3236 umuD 6911689 Sden_3235 umuC 6909507 Sden_1131 xerC # RNA - TPP 6910738 Sden_2321 omp_thi 6910737 Sden_2320 ykoF 6910736 Sden_2319 pnuT 6910735 Sden_2318 thiK 6910174 Sden_1770 thiC 6910175 Sden_1771 thiDE 6910176 Sden_1772 thiF 6910177 Sden_1773 thiS 6910178 Sden_1774 thiG 6910179 Sden_1775 thiH # RNA - Cobalamin 6909095 Sden_0729 btuB # RNA - Lysine 6910979 Sden_2537 lysW 6911432 Sden_2982 lysC # RNA - MOCO_RNA_motif 6908445 Sden_0101 moaA 6908446 Sden_0102 moaC 6908447 Sden_0103 moaD 6908448 Sden_0104 moaE 6908449 Sden_0105 modA 6908450 Sden_0106 modB 6908451 Sden_0107 modC # RNA - GEMM_RNA_motif 6910553 Sden_2136 null # RNA - yybP-ykoY 6909046 Sden_0682 COG2119 # RNA - His_leader 6910018 Sden_1618 hisG 6910017 Sden_1617 hisD 6910016 Sden_1616 hisC 6910015 Sden_1615 hisB 6910014 Sden_1614 hisH 6910013 Sden_1613 hisA 6910012 Sden_1612 hisF 6910011 Sden_1611 hisI # RNA - Leu_leader 6908689 Sden_0334 leuA 6908690 Sden_0335 leuB 6908691 Sden_0336 leuC 6908692 Sden_0337 leuD # RNA - S15 6909386 Sden_1010 rpsO # RNA - Thr_leader 6911184 Sden_2740 thrA 6911183 Sden_2739 thrB 6911182 Sden_2738 thrC # RNA - Trp_leader 6910874 Sden_2450 trpE 6910875 Sden_2451 trpG 6910876 Sden_2452 trpD 6910877 Sden_2453 trpC 6910878 Sden_2454 trpB 6910879 Sden_2455 trpA # TF - Fur: Sden_1593 6910319 Sden_1906 null 6911515 Sden_3064 Sden_3064 6911516 Sden_3065 piuB 6912057 Sden_3594 null 6909363 Sden_0990 bfr2 6909364 Sden_0991 bfr1 6909002 Sden_0638 Sfri_4035 6909003 Sden_0639 null 6909004 Sden_0640 COG3182 6910931 Sden_2503 null 6912174 Sden_3706 null 6909155 Sden_0789 tonB 6909154 Sden_0788 exbB 6909153 Sden_0787 exbD 6909152 Sden_0786 hmuB 6909151 Sden_0785 hmuC 6909150 Sden_0784 hmuD 6910262 Sden_1854 Sfri_2008 6909086 Sden_0721 Sfri_0810 6909087 Sden_0722 Sfri_0811 6909088 Sden_0723 Sfri_0812 6910838 Sden_2415 feoA 6910837 Sden_2414 feoB 6909156 Sden_0790 hmuA 6909157 Sden_0791 huvX 6909158 Sden_0792 null 6908984 Sden_0620 null 6908983 Sden_0619 null 6908982 Sden_0618 null 6911671 Sden_3217 bfd 6908985 Sden_0621 viuA 6910774 Sden_2355 null 6910775 Sden_2356 null 6910776 Sden_2357 null 6908973 Sden_0609 Sfri_3851 6908954 Sden_0590 Sden_0590 6908953 Sden_0589 Sden_0589 6908952 Sden_0588 pvsB 6908951 Sden_0587 Sden_0587 6908950 Sden_0586 Sden_0586 6908949 Sden_0585 null 6908948 Sden_0584 pvsE 6908947 Sden_0583 Sden_0583 6908946 Sden_0582 Sden_0582 6909843 Sden_1445 null 6911515 Sden_3064 null 6911516 Sden_3065 piuB 6910576 Sden_2159 null 6910575 Sden_2158 null 6910574 Sden_2157 ttpc 6910573 Sden_2156 exbB 6910572 Sden_2155 exbD 6910571 Sden_2154 null 6910570 Sden_2153 tprX 6910569 Sden_2152 null 6910568 Sden_2151 null 6910567 Sden_2150 null 6909992 Sden_1592 null # TF - Crp: Sden_3190 6909927 Sden_1529 fadI 6909928 Sden_1530 fadJ 6911003 Sden_2561 icd 6911832 Sden_3378 yniC 6911661 Sden_3210 null 6909260 Sden_0887 SO1388 6910134 Sden_1731 ycbW 6909400 Sden_1024 tsx 6911807 Sden_3353 SO4118 6911806 Sden_3352 mshH 6911805 Sden_3351 mshI 6912085 Sden_3622 cytcB 6912032 Sden_3569 ccmA 6912033 Sden_3570 ccmB 6912034 Sden_3571 ccmC 6912035 Sden_3572 ccmD 6912036 Sden_3573 ccmE 6909926 Sden_1528 SO3090 6909925 Sden_1527 SO3091 6909924 Sden_1526 null 6909923 Sden_1525 SO3093 6909922 Sden_1524 SO3094 6909921 Sden_1523 SO3095 6912031 Sden_3568 scyA 6911831 Sden_3377 acnB 6909657 Sden_1274 cydA 6909658 Sden_1275 cydB 6911525 Sden_3074 udp 6909021 Sden_0657 SO0543 6910838 Sden_2415 feoA 6910837 Sden_2414 feoB 6911644 Sden_3193 astC 6911643 Sden_3192 astA 6911642 Sden_3191 astD 6910168 Sden_1765 SO2535 6912085 Sden_3622 cytcB 6912084 Sden_3621 engB 6910579 Sden_2162 hmgA 6909851 Sden_1453 SO2806 6910807 Sden_2384 null 6908747 Sden_0388 hemC 6908746 Sden_0387 hemD 6908745 Sden_0386 hemX 6908744 Sden_0385 hemY 6910508 Sden_2091 Swoo_2741 6908897 Sden_0534 SO0572 6910025 Sden_1625 fadD1 6910326 Sden_1912 fumB 6908445 Sden_0101 moaA 6908446 Sden_0102 moaC 6908447 Sden_0103 moaD 6908448 Sden_0104 moaE 6908449 Sden_0105 modA 6908450 Sden_0106 modB 6908451 Sden_0107 modC 6911524 Sden_3073 SO4131 6911031 Sden_2589 ompW 6910578 Sden_2161 hmgR 6909606 Sden_1224 purE 6909605 Sden_1223 purK 6909604 Sden_1222 SO3556 6910259 Sden_1851 ccoN 6910258 Sden_1850 ccoO 6910257 Sden_1849 ccoQ 6910256 Sden_1848 ccoP 6911037 Sden_2595 phhA 6911036 Sden_2594 phhB 6911190 Sden_2746 yfiA-2 6911034 Sden_2592 fahA 6911033 Sden_2591 maiA 6909002 Sden_0638 Sfri_4035 6909003 Sden_0639 Sfri_4034 6909004 Sden_0640 Sfri_4033 6911499 Sden_3048 Sputcn32_0834 6911500 Sden_3049 asnC 6910981 Sden_2539 etfB 6910980 Sden_2538 etfA 6911174 Sden_2730 SO3541 6911977 Sden_3517 SO4606 6911978 Sden_3518 SO4607 6911979 Sden_3519 coxG 6911980 Sden_3520 SO4609 6911641 Sden_3190 crp 6909355 Sden_0982 nqrA-2 6909356 Sden_0983 nqrB-2 6909357 Sden_0984 nqrC-2 6909358 Sden_0985 nqrD-1 6909359 Sden_0986 nqrE-2 6909360 Sden_0987 nqrF-2 6910040 Sden_1640 ydhD 6911228 Sden_2784 cyaC 6911360 Sden_2910 SO1064 6911361 Sden_2911 slyX 6911362 Sden_2912 def-2 6911363 Sden_2913 SO1061 6911364 Sden_2914 spaP 6911365 Sden_2915 SO1059 6910604 Sden_2187 sdhC 6910603 Sden_2186 SO1927.1 6910602 Sden_2185 sdhA 6910601 Sden_2184 sdhB 6910600 Sden_2183 sucA 6910599 Sden_2182 sucB 6910598 Sden_2181 sucC 6910597 Sden_2180 sucD 6910039 Sden_1639 sodB 6911189 Sden_2745 SO3421 6910167 Sden_1764 fadE2 6911175 Sden_2731 phk 6910509 Sden_2092 SO2757 6908444 Sden_0100 etfD # TF - Fnr: Sden_1843 6910040 Sden_1640 ydhD 6911228 Sden_2784 cyaB 6909657 Sden_1274 cydA 6909658 Sden_1275 cydB 6909659 Sden_1276 ybgT 6910259 Sden_1851 ccoN 6910258 Sden_1850 ccoO 6910257 Sden_1849 ccoQ 6910256 Sden_1848 ccoP 6910255 Sden_1847 ccoH 6910254 Sden_1846 ccoI 6910253 Sden_1845 ccoS 6910252 Sden_1844 ccoX 6910251 Sden_1843 fnr 6909893 Sden_1495 napE2 6909894 Sden_1496 napD2 6909895 Sden_1497 napA2 6909896 Sden_1498 napB2 6909897 Sden_1499 napC2 6910250 Sden_1842 uspE 6911031 Sden_2589 ompW 6909233 Sden_0860 cydD 6909232 Sden_0859 cydC 6909363 Sden_0990 bfr2 6909364 Sden_0991 bfr1 6911977 Sden_3517 coxB 6911978 Sden_3518 coxA 6911979 Sden_3519 coxZ 6911980 Sden_3520 coxC 6909814 Sden_1419 nrdD 6909815 Sden_1420 nrdG 6908902 Sden_0539 SO0579 # TF - MetJ: Sden_0614 6909052 Sden_0687 metT 6908979 Sden_0615 metB 6908980 Sden_0616 metL 6911030 Sden_2588 metA 6909458 Sden_1082 metK 6909196 Sden_0823 metY 6909097 Sden_0731 metR 6909491 Sden_1115 metH 6908978 Sden_0614 metJ 6909006 Sden_0642 metF 6910188 Sden_1784 msrA 6909098 Sden_0732 metE