# TF - RpoH: Ddes_1443
>Ddes_0691(clpP) Score=5.4 Pos=-159 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CCCGAAA-----------GCCGAT
>Ddes_2161(rpoZ) Score=6.8 Pos=-180 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGACA-----------GCCTAT
# TF - PhoB: Ddes_0567
>Ddes_0567(phoB) Score=5.2 Pos=-82 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTCACGAAATTGTAAC
>Ddes_0566(pstS) Score=5 Pos=-99 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CCGTCATCATTCTGTAAC
# TF - PerR: Ddes_1388
>Ddes_1704 Score=5.2 Pos=-44 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCAAGAATGATTATTGTT
>Ddes_2010(rbO) Score=5 Pos=-179 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATTGATAATAATTATTGAT
>Ddes_1388(perR) Score=4.8 Pos=-33 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AACAGTAATTTTTACTATC
>Ddes_0897(rbr2) Score=6 Pos=-56 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATAGGAATTGTTATTGAT
# TF - NikR: Ddes_1765
>Ddes_1470(nikK) Score=5.4 Pos=-93 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGCTAC-------------GTGTAAC
>Ddes_1032(nikA) Score=7 Pos=-85 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTGTCAC-------------TTGACAC
# TF - TunR: Ddes_0167
>Ddes_1667(phsA) Score=4.3 Pos=-399 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTTCACGAAAATGAAAAATAGCGTGTAAA
>Ddes_0168(modA) Score=5 Pos=-100 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTTCACGCTTTTTATGTAAATCGTGATCT
>Ddes_0089 Score=5 Pos=-100 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TATTCACGATTATTATAAAAACCGTGAACA
>Ddes_0167(TunR) Score=5 Pos=-85 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGATCACGATTTACATAAAAAGCGTGAACA
# TF - ArsR3: Ddes_1925
>Ddes_1926(arsM) Score=6.3 Pos=-43 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CAAGGCAACATTAGTTGAATAG
>Ddes_1925(arsR3) Score=6.3 Pos=-29 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CAATTCAATATAAGTTGAAATA
# TF - Ddes_0528, DESPIG_03026: Ddes_0528
>Ddes_0528(hcpR2) Score=6.3 Pos=-162 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGTGACTACAGTCACAG
>Ddes_1164 Score=5.9 Pos=-99 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGTGCGTATACTCACAG
# TF - Fur: Ddes_0603
>Ddes_1459 Score=5.1 Pos=-32 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTCAATTTCATATTCAT
>Ddes_1459 Score=5.8 Pos=-38 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAATTTCAATTTCAT
>Ddes_1951(fld) Score=4.5 Pos=-48 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGAATTTCATTTTATA
>Ddes_1951(fld) Score=5.8 Pos=-54 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAAATGAATTTCAT
>Ddes_1750(feoA) Score=5.2 Pos=-175 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAATTGACTTTCTT
>Ddes_1586 Score=5.8 Pos=-89 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAATTCAATTTCAA
>Ddes_1586 Score=5.4 Pos=-95 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGACTTTGAAATTCAA
>Ddes_1247 Score=4.9 Pos=-84 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAAAAGAATTTCAA
>Ddes_1652 Score=5.8 Pos=-67 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAATTTCAATTTCAT
>Ddes_1652 Score=5.7 Pos=-73 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGACATTGAATTTCAA
>Ddes_0477 Score=4.5 Pos=-45 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGATTTTCAATCTAAA
>Ddes_0477 Score=5.9 Pos=-51 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAATTGATTTTCAA
>Ddes_0648 Score=5.2 Pos=-28 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAATTCAAATTCTA
>Ddes_0648 Score=4.7 Pos=-34 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AAGACTTTGAAATTCAA
>Ddes_1876(copA) Score=3.7 Pos=-136 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTCAATTTCAATGTGGT
>Ddes_1876(copA) Score=3.7 Pos=-142 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ACAGTTTTCAATTTCAA
>Ddes_1729 Score=5.4 Pos=-74 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGACTTTCATTTTCAC
>Ddes_1729 Score=5.4 Pos=-80 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGACATTGACTTTCAT
>Ddes_0430 Score=3.8 Pos=-192 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAATGTTCTTTTCAG
>Ddes_0430 Score=4.2 Pos=-198 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGAAATTGAATGTTCT
# TF - FliA: Ddes_0325
>Ddes_2179 Score=6.6 Pos=-228 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TAAAGCTT-----------GGCGTTAA
>Ddes_0530 Score=6.6 Pos=-176 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TAAACCTT-----------GCCGTTAT
>Ddes_2006 Score=6.9 Pos=-49 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TAAAGTTT-----------TCCGAACA
>Ddes_0949 Score=7.6 Pos=-55 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGAAGTTT-----------GCCGATAA
>Ddes_1275 Score=7.8 Pos=-50 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TAAAGCTT-----------TCCGATAG
>Ddes_1383 Score=8.1 Pos=-84 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TAAAGATG-----------GCCGATAA
# TF - DVU2802: Ddes_1719
>Ddes_1719 Score=5.5 Pos=-142 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTTGGTATGACCAGAA
# TF - DVU2644: Ddes_0341
>Ddes_0339 Score=5.2 Pos=-137 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CAAATGTTGACATTTA
# TF - CooA: Ddes_0383
>Ddes_0382(cooS) Score=6.1 Pos=-117 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTCAGCCAGCCGACA
# TF - SahR: Ddes_0040
>Ddes_0040(sahR) Score=5.4 Pos=-57 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATATGCGGATAACTTGATAC
>Ddes_0040(sahR) Score=5 Pos=-35 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTATCAGCATAAATTGATTT
>Ddes_2286(panC) Score=5.8 Pos=-18 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATATCACAATACCTTGATAT
>Ddes_2286(panC) Score=4.2 Pos=-10 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATACCTTGATATGCAGATAT
>Ddes_2008(metF) Score=6.5 Pos=-80 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATATCAATTTATCTTGATAT
# TF - Ddes_1411/Ddes_2092: Ddes_2092, Ddes_1411
>Ddes_1411(Ddes_1411/Ddes_2092) Score=4.7 Pos=-39 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTTGCAACAGCATGAA
>Ddes_2093 Score=5.7 Pos=-129 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTTGCATACGGAACAC
>Ddes_1412 Score=5.7 Pos=-128 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGTTGCAATGACAACAT
>Ddes_1413 Score=5.7 Pos=-227 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGTTGTTGGTGCAACAT
>Ddes_1413 Score=6 Pos=-101 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTTGCATGGGCAACAA
>Ddes_2092(Ddes_1411/Ddes_2092) Score=5.4 Pos=-97 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTGTTCCGTATGCAACAT
>Ddes_1411(Ddes_1411/Ddes_2092) Score=5.6 Pos=-189 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTTGTCATTGCAACAA
>Ddes_1414 Score=5.7 Pos=-125 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATGTTGCACCAACAACAA
# TF - Ddes_1827: Ddes_1827
>Ddes_1827 Score=6.1 Pos=-57 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CACTGCCGCCCGGCAACA
# TF - Ddes_1264: Ddes_1264
>Ddes_1264 Score=7.4 Pos=-128 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TATTTCGTCAAAGAACGAAATA
>Ddes_1264 Score=7.4 Pos=-177 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CATTTCGTCGCATGACGAAATA
# RNA - FMN
>Ddes_2290(ribB) Score=102.1 Pos=-156 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTGCAGCCGCCAATGGCCTTGCGCATGTGCGCCGGGTTTTTGCTGCCGCGTGTGAACTTTTGCCTTCGGGCTGAAGTTTCCGGTGGCATCCCTTTGAGCGGCCCGTCCACGCCCTGATGCACCCTCTCCCGGCACCAGCCGGAAAAGGAG
# RNA - TPP
>Ddes_2165(thiS) Score=25.5 Pos=-239 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AAACCGGCTGGGGGAGCCATCATGGCTGAGAAAGGGCTTACGCGCCCTGACCCCTAGAATTGCGCAAAAAAACGCGATTCTGCA
>Ddes_2165(thiS) Score=14.8 Pos=-155 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CCTGACGCGGATAGTGCCGACGAAGGGA
>Ddes_0628(thiC) Score=51.7 Pos=-165 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCCTTCGAGCTAGGGGAGCCGTGCAGACAACTGCGCGGCTGAGAGTGGGATTTCCCAGACCCTTGAACCTGACGCAGTTCGCACTGCCGGAGGGAAGCCGCGGCCACAAGCT
# RNA - Cobalamin
>Ddes_0796(btuC) Score=77.4 Pos=-548 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AAAGTATGCGCGGCAATGGTAGCCGGAACACCGGCTTGAAAAGGGAATCCCGTGCAATGCGGGAGCGGACCCGCCGCCGTAAGGTTCATGAACCTCGCACCATGCAGCGCCACTGGAAACGGGAAGGCCGGGGCGGGGGAACCAAGCCGGAAGACCTGCCTTGCCCTGCGGCCCGCGCAT
>Ddes_2334(cbiK2) Score=55.6 Pos=-255 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGACATTTACCGCGCCCTGTTGTCCTCTGTCGTTTTGGCGGGGAATTTCGTGCAAATCGAAAACAGTCGCGCTGCGGTAAGAGGGGACAAAGCTTCTTCATGCTGTTCTGAAGAGCGGCATGCGACAGCCAGTCGCATATGCGGTGAAGGCGAAGCCAAGGCGCGGGCCATATGGCCCCACAGCCCTCAAGTCCGAACATCCGCCGGGGCCGGTGCCCCTTGCGA
>Ddes_1071 Score=102.7 Pos=-138 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATTTTCTAGACATTGAAAGTGCCCCACCGGGCTTAATCGGGAATCCCGTGAAAAGCGGGAGCGGACCCGCCGCCGTAAGCCGGGCAACAAACTGTCTTTCACCATGCGCCACTGGGTTCAGCCCGGGAAGGCCGAAAGATGGCCGGCAAGCCGGAAGACCTGCTTTCAACTTACCTTCAAAGGG
# RNA - Glycine
>Ddes_0984(Ddes_0984) Score=61.7 Pos=-238 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGATGACCATGAGAGAGCTTGCTGCTGGACAGCACGCCGAAGGGGCAAGAGCAATCGAAACTCTCAGGCAAAAGGATCATGGTCGGACG
>Ddes_0112(grdB) Score=53.6 Pos=-637 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTTAATGCGTGAGAGAGTCTCCAGCTTTCCAAAAGCTAGGGGCACCGAAGGGGCAAAGCCGCCAGGCCGAAACTCTCAGGTAAAAGAATCGCGCATTCTCGTG
# RNA - yybP-ykoY
>Ddes_0594(COG0530) Score=55.5 Pos=-147 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTGGCTGCTACAAGGGGAGTAACTGGGTTCTTGAAACCCGGGCGGTATCAACAGCATGGCTTTCGGGCCTGGTGCCGCCGTCGGTAAGCCGATTAGTGAGACCTTGGCGTCAACG
# TF - DVU1964/DVU1967: Ddes_0843, Ddes_0842
>Ddes_0843(DVU1967) Score=4.7 Pos=-77 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATCATGAGTAAAGCAGTCTAAAT
>Ddes_0843(DVU1967) Score=4.6 Pos=-57 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATTAGACGTATCAAGTATGGTA
>Ddes_1846 Score=4.8 Pos=-196 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AAACATACTAGTTTAGTATTAAT
# RNA - mini-ykkC
>Ddes_2158(ykkC) Score=39 Pos=-74 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ACAGGGAGGACGACCTCCCCCCATCAGGGGCATCTGATCCGGGACGACCCGG
# TF - Rex: Ddes_2257
>Ddes_2130(apsB) Score=4.4 Pos=-140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGTTACTAATTGCGCAAG
>Ddes_0454(sat) Score=5.4 Pos=-108 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGTTAGATTATTCACAAG
>Ddes_1880(cooM) Score=4.3 Pos=-110 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTACTATTTTTTTCACGAT
>Ddes_0968(ppaC) Score=4.4 Pos=-70 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGTGCTAAAGAGTACAAA
>Ddes_1956(adk) Score=4.6 Pos=-51 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTGTTCTTTTTTGCACAAT
>Ddes_1237(dhcA) Score=4.6 Pos=-214 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ACTGTGAAAAATATCACCAA
>Ddes_0921(dsrA) Score=4 Pos=-209 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATTTTTAAATATAAAACAAA
>Ddes_2183(atpF1) Score=5 Pos=-113 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGCGAAATTTGTCACCAA
# TF - DVU2827: Ddes_1434
>Ddes_1437 Score=4.3 Pos=-479 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CCATCCATTTTTGCGACG
>Ddes_1436 Score=5 Pos=-222 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGGTGCAAAAAAGCATCA
>Ddes_1436 Score=4.3 Pos=-263 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGTCGCAAAAATGGATGG
>Ddes_1436 Score=4.7 Pos=-398 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGTCGCAAGTTTGCAGCT
>Ddes_1436 Score=5.4 Pos=-276 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTTGCAAAAATGCGTCG
>Ddes_1437 Score=4.7 Pos=-344 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGCTGCAAACTTGCGACT
>Ddes_1437 Score=5.4 Pos=-466 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGACGCATTTTTGCAACA
# TF - DvMF_1994
>Ddes_2374 Score=4.7 Pos=-136 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCTTATACCTGATGCAATAT
# TF - DVU0151: Ddes_1643
>Ddes_1642 Score=4.3 Pos=-94 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTTTCACATTCAC
>Ddes_1642 Score=4.6 Pos=-166 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTTTCGCGCAAAA
# TF - DVU2894: Ddes_1305
>Ddes_1836 Score=5.2 Pos=-475 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGTCAGGCACTTGACG
>Ddes_2282 Score=4.1 Pos=-276 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGACAGCAATTTGACG
>Ddes_2004 Score=4.8 Pos=-4 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGCCATGAAATTGACG
>Ddes_0313 Score=4.8 Pos=-445 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGTCAGATGTTTGACA
>Ddes_1305 Score=5.3 Pos=-46 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGTCAGTGTATTGACA
# TF - DVU0621: Ddes_0084
>Ddes_0614 Score=5.5 Pos=-228 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCATATTTTTATGAA
>Ddes_0614 Score=4.7 Pos=-194 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTGATGTTTTTCTCAA
>Ddes_0614 Score=5.3 Pos=-248 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCATGTTTTTATGAA
>Ddes_0082(nrfH) Score=5.7 Pos=-315 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCATAATTTTCTGAA
>Ddes_0082(nrfH) Score=5.5 Pos=-295 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTCATGTTTATCTGAA
# TF - ZraR: Ddes_0187
>Ddes_1704(LI1080) Score=4.1 Pos=-228 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTTTTATTAGTAGACA
# TF - RpoN: Ddes_0974
>Ddes_0750(nudF) Score=4.1 Pos=-76 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGCGGCCCGGCGCGTGCTG
>Ddes_0811 Score=4 Pos=47 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TATGGCAAAGCTCCTGTTG
>Ddes_2002(DVU0518) Score=4.4 Pos=-84 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGAGGCACGGAAATTGCTT
>Ddes_0327(flhF) Score=4.5 Pos=-96 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGGCCCCTAATTTGCAT
>Ddes_1259(fliK) Score=4.6 Pos=-43 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGAACACTCTTTGTAT
>Ddes_1260(flgD) Score=4.4 Pos=-98 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTTGGAACAGCCTGTGCAT
>Ddes_0185(zraP) Score=4.3 Pos=-134 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGTTGCATGATTTTTGCAA
>Ddes_2091(flgE) Score=5.3 Pos=-76 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCACGCTCTCTGCAT
>Ddes_1576(flgB) Score=4.8 Pos=-59 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGAACAAATGTTGCTT
>Ddes_1573(fliF) Score=4.5 Pos=-79 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTAGGCATGAATGTTGCTA
>Ddes_0698(fliJ) Score=3.9 Pos=-119 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGTGGCATGGTGGCTGCGC
>Ddes_0698(fliJ) Score=5 Pos=-63 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGGCCCGCTGTTTGCAC
>Ddes_2374 Score=5.3 Pos=-198 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCACGCACATTGCTC
>Ddes_1436 Score=4.7 Pos=-123 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGTGGCATGCCCCATGCAA
>Ddes_0220 Score=4.6 Pos=-190 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGAACACTTCTTGTAT
>Ddes_1437 Score=5.1 Pos=-228 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCACGCATCCTGCAA
>Ddes_0311 Score=4.8 Pos=-61 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGGCACTGTACTTGCTG
>Ddes_0313 Score=4.9 Pos=-75 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCATACAGTTTGCTT
>Ddes_1147(amt) Score=4.7 Pos=-126 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGGCACAGATAGTGCTT
>Ddes_0596 Score=4.9 Pos=-177 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCACGTTTCTGGCAT
>Ddes_0596 Score=4.3 Pos=-148 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCACACACTGTGCCG
>Ddes_0596 Score=4 Pos=-54 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTTGGCAAGGTGAATGCCA
>Ddes_0530(fliD) Score=4.5 Pos=-82 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGTTGCACGCATTTTGCAA
>Ddes_2282(flaB3) Score=4.8 Pos=-243 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCATGATTCCTGCTG
>Ddes_0763 Score=4.6 Pos=-59 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTTGGCAGCATTTTTGCAT
>Ddes_2004(flgI) Score=4.9 Pos=-57 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTCGGCACGCTTTCTGCAA
>Ddes_0373(fliL) Score=4.7 Pos=-141 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCACAGTGTCTGCAA
>Ddes_0378(fliQ) Score=4.4 Pos=-71 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCATCAATCTTGAAT
>Ddes_0332(flhB) Score=4.5 Pos=-79 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CCGGGTACGCTTCTTGCTA
>Ddes_0193(fliR) Score=4.7 Pos=-29 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCAACCATTTTGCAA
>Ddes_0391(flgF) Score=5.3 Pos=-101 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCCCGCACTTTGCAT
>Ddes_1836(fliM) Score=4.4 Pos=-78 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCCTTTTTCTTGCAT
>Ddes_0331(flhA) Score=4.9 Pos=-175 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCACGGGCTTTGTAT
>Ddes_1867(DVU2108) Score=3.8 Pos=-118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GCAGGGACGCTTTTTGTAT
>Ddes_0695 Score=4.9 Pos=-76 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCAAGACCTTTGCAT
>Ddes_0186(zraS) Score=3.4 Pos=-27 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATTTGCAAAAATCATGCAA
>Ddes_1230 Score=5.3 Pos=-120 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCATCCATCTTGCTT
>Ddes_2345 Score=4.7 Pos=-151 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTTGGCCTGCCTATTGCAC
>Ddes_2346 Score=4.3 Pos=-62 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TCTGGCATCATTAGTGCAA
>Ddes_2342 Score=4.7 Pos=-63 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCACGACTACTGCAG
>Ddes_0154 Score=4.8 Pos=-244 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGAACAATGTTTGCTA
>Ddes_2343 Score=4.6 Pos=-81 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GTTGGCATACTTATTGATT
>Ddes_1559 Score=4.4 Pos=-66 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TATGGACCATATTTTGCAT
>Ddes_0082(nrfH) Score=4.2 Pos=-191 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ACTGGTACGTTTCTTGAAA
>Ddes_1642 Score=4.9 Pos=-115 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCATGGCGATTGCTA
>Ddes_2079(mltC) Score=4.1 Pos=-173 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AATGGCAGCAAATTTGCAT
>Ddes_0767 Score=5.1 Pos=-110 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
ATTGGCACGACCTTTGCCT
>Ddes_1028(fliC) Score=4.6 Pos=-58 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TTTGGCACATGGATTGCAA
# TF - DVU1063: Ddes_2381
>Ddes_1559 Score=4 Pos=-23 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
AGCAATTTTTGCC
>Ddes_2091(flgE) Score=4.2 Pos=-154 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGAATATTCTGCA
>Ddes_2091(flgE) Score=4.5 Pos=-43 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGAATGTTTTTCC
>Ddes_2002 Score=4 Pos=-172 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGCAGATTCTGCG
>Ddes_2002 Score=4.8 Pos=-50 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGCAGATTCTGCC
>Ddes_0530(fliD) Score=4.6 Pos=-101 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGCAAAAAATGCC
>Ddes_0530(fliD) Score=3.8 Pos=-243 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGCAAAAATTTCA
>Ddes_1028 Score=4.2 Pos=-186 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CGCAAATTTTTCC
>Ddes_1028 Score=4.6 Pos=-119 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGAAAAAAATTCC
>Ddes_0763 Score=4.9 Pos=-125 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGAAAAATTTTCC
>Ddes_1260(flgD) Score=4.5 Pos=-65 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGCAAGATATGCC
>Ddes_1259(fliK) Score=4.2 Pos=1 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
TGCAGATTATTCC
>Ddes_1259(fliK) Score=4.5 Pos=-107 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGCAATACTTGCC
>Ddes_1260(flgD) Score=4.3 Pos=-185 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
GGAAGAAGATGCC
# TF - PdxQ: Ddes_1162
>Ddes_1163(pdxO) Score=9.3 Pos=-68 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
CTGTCC-(14)-CTGTTT-(14)-GGTCAA