# TF - NrdR: AZC_1262
>AZC_1268(nrdJ) Score=5.1 Pos=-262 [Azorhizobium caulinodans ORS 571]
TCACTATATTTAGTAG
# TF - SahR: AZC_4339
>AZC_4042(ahcY) Score=6.6 Pos=-81 [Azorhizobium caulinodans ORS 571]
ATATAAACATTTCTTTATAT
>AZC_4339(sahR) Score=7.1 Pos=-16 [Azorhizobium caulinodans ORS 571]
ATATAAAGATATCTTTATGT
# TF - Irr: AZC_3445, AZC_0367
>AZC_1632(hmuR) Score=3.9 Pos=-82 [Azorhizobium caulinodans ORS 571]
ACACTGAAACAGTTATAAATA
>AZC_0183(cbrA) Score=5.1 Pos=-155 [Azorhizobium caulinodans ORS 571]
TGTTTGGAATAAATCGAAAAA
>AZC_1578(hmuP) Score=5 Pos=-77 [Azorhizobium caulinodans ORS 571]
AATATTGAATCGCTCTAAAGT
>AZC_4058(PF00033) Score=5.2 Pos=-38 [Azorhizobium caulinodans ORS 571]
AGTCTGGACCGGTTCTAAACA
>AZC_1626(fhuA) Score=5.3 Pos=-53 [Azorhizobium caulinodans ORS 571]
AGATTTGAATACTTCTGAACT
>AZC_2246(bfr) Score=5.3 Pos=-66 [Azorhizobium caulinodans ORS 571]
AGTTTGGAATTGGTCTAATTA
>AZC_1578(hmuP) Score=5 Pos=-17 [Azorhizobium caulinodans ORS 571]
AGTTTGGAGTCATTCAAATGA
>AZC_4085(mbfA) Score=5.6 Pos=-36 [Azorhizobium caulinodans ORS 571]
AAATTAGAAGAGTTCTAAAAA
>AZC_4385(hmuT) Score=3.7 Pos=-65 [Azorhizobium caulinodans ORS 571]
CAAGTTGATTACCTCTAAACT
>AZC_3616(sufS2) Score=6 Pos=-99 [Azorhizobium caulinodans ORS 571]
TATTTAGAATAATTCTAATGT
# TF - NtrC: AZC_3086
>AZC_1511(dppA) Score=4.8 Pos=-159 [Azorhizobium caulinodans ORS 571]
TGCTCAATTTTTAATCT
>AZC_0686(nrtA) Score=4.6 Pos=-242 [Azorhizobium caulinodans ORS 571]
TGCTCATTTTTTGATCT
>AZC_4227(glnK) Score=4 Pos=-241 [Azorhizobium caulinodans ORS 571]
CGCCTATTTTTAAGGCA
>AZC_1758(urtA) Score=4.6 Pos=-179 [Azorhizobium caulinodans ORS 571]
TGCCTAAATTATAGTCA
>AZC_4397(uctA) Score=3.8 Pos=-230 [Azorhizobium caulinodans ORS 571]
TGGCTAAAATTTAGACA
>AZC_1602(glnB) Score=4.4 Pos=-134 [Azorhizobium caulinodans ORS 571]
CGCATACTATTTAGGCA
# TF - Mur: AZC_0006
>AZC_3295(mntH) Score=5.4 Pos=-83 [Azorhizobium caulinodans ORS 571]
CTTGCAAATCGTTCGCATT
# TF - ModE: AZC_1791
>AZC_2368(modA) Score=5.4 Pos=-41 [Azorhizobium caulinodans ORS 571]
GCTATATATGAGGAGATATAAC
# TF - LexA: AZC_2201
>AZC_2855(recA) Score=1.1 Pos=-61 [Azorhizobium caulinodans ORS 571]
GAACAAATGAGGTAC
>AZC_2855(recA) Score=1.6 Pos=-79 [Azorhizobium caulinodans ORS 571]
GAACATATTGCGAAC
>AZC_2201(lexA) Score=5.3 Pos=-80 [Azorhizobium caulinodans ORS 571]
GTTCCTGATTTGTTT
>AZC_2887(uvrA) Score=5 Pos=-21 [Azorhizobium caulinodans ORS 571]
GTTCTATTTATGTTC
>AZC_4342(yifB) Score=4.3 Pos=-80 [Azorhizobium caulinodans ORS 571]
GTTCGCAATCTGTTC
>AZC_0799(rmuC) Score=4.9 Pos=-44 [Azorhizobium caulinodans ORS 571]
GTTCGCTGTTTGTTC
>AZC_0428(PF04055) Score=5.4 Pos=2 [Azorhizobium caulinodans ORS 571]
GTTCTTGTTTCGTTC
>AZC_2201(lexA) Score=0.1 Pos=-106 [Azorhizobium caulinodans ORS 571]
GAACAAACAAGAAAC
>AZC_2886(ssb) Score=1.4 Pos=-187 [Azorhizobium caulinodans ORS 571]
GAACATAAATAGAAC
>AZC_3127(uvrB) Score=4.6 Pos=-61 [Azorhizobium caulinodans ORS 571]
GGTCCCCTTTTGTTC
>AZC_3906(imuA) Score=0.5 Pos=-20 [Azorhizobium caulinodans ORS 571]
GAACAAAACGGGAAC
>AZC_2886(ssb) Score=1.1 Pos=-265 [Azorhizobium caulinodans ORS 571]
GAACGTAACAGGAAC
# TF - NifA: AZC_1049
>AZC_1051(ahpC) Score=5.6 Pos=-161 [Azorhizobium caulinodans ORS 571]
TGTCGGAAAGCCGACA
>AZC_1051(ahpC) Score=4.3 Pos=-206 [Azorhizobium caulinodans ORS 571]
CGGCGGGTTCCCGACA
>AZC_1041(nifH) Score=4.7 Pos=-281 [Azorhizobium caulinodans ORS 571]
TGTCGCGTTTGAAACA
>AZC_3414(nifB) Score=5.1 Pos=-138 [Azorhizobium caulinodans ORS 571]
TGTTGGCAACGCGACA
>AZC_3442(cheY) Score=4.8 Pos=-192 [Azorhizobium caulinodans ORS 571]
TGTCTCGAACCTGACA
>AZC_3442(cheY) Score=4.3 Pos=-163 [Azorhizobium caulinodans ORS 571]
TGTTGGAAAGGAAACA
>AZC_0303(fer2) Score=3.8 Pos=-67 [Azorhizobium caulinodans ORS 571]
TGTGGGGCCTCCGGCA
>AZC_1052(xdhC) Score=4.3 Pos=-190 [Azorhizobium caulinodans ORS 571]
TGTCGGGAACCCGCCG
>AZC_1043(fdxN) Score=5.2 Pos=-142 [Azorhizobium caulinodans ORS 571]
TGTCGGGGGCGCGACA
>AZC_1052(xdhC) Score=5.6 Pos=-235 [Azorhizobium caulinodans ORS 571]
TGTCGGCTTTCCGACA
>AZC_3437(bolA) Score=5.4 Pos=-128 [Azorhizobium caulinodans ORS 571]
TGTCGCATGTGCGACA
>AZC_1043(fdxN) Score=5.3 Pos=-160 [Azorhizobium caulinodans ORS 571]
TGTCGCAGTCGCGACA
>AZC_3409(iscN) Score=4.3 Pos=-116 [Azorhizobium caulinodans ORS 571]
GGTCTGCTTCGCGACA
>AZC_3409(iscN) Score=5.5 Pos=-134 [Azorhizobium caulinodans ORS 571]
TGTCGCAAAGGCGACA
>AZC_3447(fixB) Score=4.2 Pos=-113 [Azorhizobium caulinodans ORS 571]
TGTGGCATGCCAGACA
>AZC_3447(fixB) Score=5 Pos=-179 [Azorhizobium caulinodans ORS 571]
TGTCGCATTCCCGACG
>AZC_3437(bolA) Score=4.1 Pos=-121 [Azorhizobium caulinodans ORS 571]
TGTGCGACATGCGACA
>AZC_3443(nifH) Score=4.3 Pos=-284 [Azorhizobium caulinodans ORS 571]
TGTTTCCTTTCCAACA
>AZC_3443(nifH) Score=4.8 Pos=-255 [Azorhizobium caulinodans ORS 571]
TGTCAGGTTCGAGACA
>AZC_3446(nifW) Score=4.1 Pos=-192 [Azorhizobium caulinodans ORS 571]
TGTCGCCTTCGGGGCA
# TF - YrdX: AZC_0074
>AZC_0073(PF02635) Score=5.7 Pos=-66 [Azorhizobium caulinodans ORS 571]
CTGGCACA---ATTGCAAA
>AZC_0073(PF02635) Score=7.2 Pos=-127 [Azorhizobium caulinodans ORS 571]
TTTGAATG---TTTGAATG
# TF - PhnF: AZC_3391
>AZC_3391(phnF) Score=4.6 Pos=-63 [Azorhizobium caulinodans ORS 571]
TTGTATAAAAGTCTATACAA
>AZC_3391(phnF) Score=4.8 Pos=-55 [Azorhizobium caulinodans ORS 571]
AAGTCTATACAAATAGGCAA
# RNA - Cobalamin
>AZC_0148(cbtC) Score=106.9 Pos=-316 [Azorhizobium caulinodans ORS 571]
GCTAAGGTGTCATCGGGAAGGTGCGGCCCTTTGGGGCCGTGAAAAGGGAATCCGGTGCGGCCACAAGGCCCAGGCCGGAGCTGCCCCCGCAACTGTAAGCGGCCGAAGACGCGATCCTCATGCCACGGGCACGCCCCGGAAGGCGATCGCGGACAGGACGCGAGCCAGGAGACCTGCCTTCTCGCAACTGAACTCG
>AZC_3933(cfrX) Score=94.9 Pos=-310 [Azorhizobium caulinodans ORS 571]
TTAGTGGCCCCATCGATGGTCCCGGTCGGGCGGCGTTCTGCTCTGCCGGGTGAAAAGGGAATGCGAAGCGGGCCGGCGCCTTCAGGCGCCAAGGTCCGTCAACCGCAGCTGCCCCCGCAACTGTAGGCGGTGAGTCGGTGCCACGAGCCACTGGACGCCAGGAGACATCCGGCGCCGGGAAGGCGGCACAGGACCGTGACCCGCAAGCCAGGAGACCTGCCATTGATGAGGAACGCGCCGG
# RNA - mini-ykkC
>AZC_4400(amt1) Score=36.4 Pos=-76 [Azorhizobium caulinodans ORS 571]
GACCGGGACGACCCGGTTGCTGTCGAGGGGCCCGGCCGGGACGACCCGGCA
# RNA - TPP
>AZC_2607(thiC) Score=63.9 Pos=-245 [Azorhizobium caulinodans ORS 571]
CTTATTCCAAGGGGGGCCCCGCGAGGGGGCTGAGATATCGTCTTCCGGTCCGGCCGTAATGGTCCCCGGCGCCACGATGACCCTTCGAACCTGATCCGGGTCATGCCGGCGAAGGGATCGGAATCAGCCTGGCGCCC
>AZC_1826(thiD) Score=46.8 Pos=-144 [Azorhizobium caulinodans ORS 571]
CCATCTCGTCGGGGTGCCGTCCGTCACGGGCGGCTGAGAGGCCAACGCCAACCCGCGAACCTGATCCGGATCATGCCGGCGGAGGGAACCGAGACTGCGGCGCGCTT
# RNA - serC
>AZC_0984(serC) Score=58.6 Pos=-50 [Azorhizobium caulinodans ORS 571]
CGCGGGACACTCCCCCCCAACGGGGAGCGCCCATCTGAAAGGATGGACACATG
# RNA - speF
>AZC_0333(speF) Score=144 Pos=-495 [Azorhizobium caulinodans ORS 571]
TCCTGCCCAATTTCGCACGTGCCTGTGGTTGCGTGCCGATCGGCGGAAGTCCGGACAAGAGGCCGGAAAGCCGCCAGCCAGATCGGTAGCCGGAGGGAACCGGCCCACCCTGCTCTCAGCAGGGGACGTGACTTGAAGCAACGACGTAGCGGGCTTTTTTGGTCTCTGCCGGCCCTCCAAAGGTCGGGGTTACTGAAGAGGCACTACATCTTGCCGGCCGTGCGGAGAGGGAATTCCCTTTCCAATCGTGCGCATCATCTTCCCAACGCCTGGCGTTTTTGCCGCGCGAAGGGAGCGGTGCCGCTCGG
# RNA - Glycine
>AZC_4245(gcvT) Score=50.7 Pos=-318 [Azorhizobium caulinodans ORS 571]
TGATCCCTGCGGGAGAGACCGGAAGCTGTCGAAAGGCAGGATCCGGCGCCGAAGGCGCAACCGCCCCGGAACCGCTCAGGCACAAAGGGCCGCAGGGTGACGAG
>AZC_4245(gcvT) Score=32 Pos=-213 [Azorhizobium caulinodans ORS 571]
CTCTGGAAAGCAGTCGCGGATGCGATGCTGGTCCGGAGCGTTTGGCGTTTTGCGCCTCGCTTCCGGCTGCATGGATCAAGCGACTCACCGAAGGAGTAAGCCGGCCCTTCCGCGTGACGGGGTTCCGGTGAATCTCTCAGGTTCCTGCGACAGAGGGG
>AZC_2080(dppA) Score=50.4 Pos=-18 [Azorhizobium caulinodans ORS 571]
CCAGAAGACGTCCGGAGAGTGACCGGCCCTGCCGGTCCGCCGAAGGAGCAAGCCGCGTCAGCGGTGAATCTCTCAGGCCCAGAACGGACGGGGCGAC
>AZC_2080(dppA) Score=60.4 Pos=-104 [Azorhizobium caulinodans ORS 571]
AATGGCAGCACCGGGAGAGACCGGATCGATCCGGCACCGAAGGAGCAACCGCCCCGGAAACTCTCAGGTCAAAGGACCGGTGCCT
# RNA - SAM_alpha
>AZC_4021(metY) Score=58.5 Pos=-131 [Azorhizobium caulinodans ORS 571]
CCCCGGCTCGTGGAGAATTTGAGCCGGCCGGCTTGCTGCCACGTTAAACAGATCGCTAAAAGGCCGGGGACGTGGCAGGCG
# RNA - ykkC-yxkD
>AZC_4397(uctB) Score=72.8 Pos=-113 [Azorhizobium caulinodans ORS 571]
GAGTTGGTGGCTAGGGTTCCGGCGCCGGAAGGCGTGTCTGGTCCGAGAGCTGCCACCGGTCCGGGAGACATCCGGATCGGGCGCACGGCGGGATAAAAGCCCGGGAGACCT
# TF - RL3595: AZC_2856
>AZC_2856(RL3595) Score=6.7 Pos=-28 [Azorhizobium caulinodans ORS 571]
TAGCGGGAACGTTCCCATCA
>AZC_2857(PF00701) Score=6.7 Pos=-93 [Azorhizobium caulinodans ORS 571]
TGATGGGAACGTTCCCGCTA
# TF - PckR: AZC_4468
>AZC_4063(pckA) Score=5.2 Pos=-128 [Azorhizobium caulinodans ORS 571]
AAATTCAAACGATTTGAACG
>AZC_4207(hpr) Score=5.1 Pos=-100 [Azorhizobium caulinodans ORS 571]
TGATTAAAACGATTGAACTA
# TF - HrcA: AZC_4287
>AZC_2311(groS) Score=6.7 Pos=-184 [Azorhizobium caulinodans ORS 571]
TTGGCACTCATGGGAGAGGAGTGCTAA
>AZC_0425(groS) Score=6.5 Pos=-71 [Azorhizobium caulinodans ORS 571]
TTGGCACTCCCATCCGGTGAGTGCCAG
# TF - SMb20667: AZC_2778
>AZC_2778(SMb20667) Score=6.6 Pos=-2 [Azorhizobium caulinodans ORS 571]
TTTTGGCAGCGCTGCCATTT
>AZC_2778(SMb20667) Score=6.6 Pos=-58 [Azorhizobium caulinodans ORS 571]
TTTTGGCAGCGCTGCCATTT
>AZC_2777(ygbJ) Score=6.6 Pos=-125 [Azorhizobium caulinodans ORS 571]
AAATGGCAGCGCTGCCAAAA
>AZC_2777(ygbJ) Score=6.6 Pos=-69 [Azorhizobium caulinodans ORS 571]
AAATGGCAGCGCTGCCAAAA
# TF - CadR-PbrR: AZC_1457
>AZC_1456(cadA) Score=6.4 Pos=-55 [Azorhizobium caulinodans ORS 571]
CTCCTCTAGTGACTAGAGGAC
# TF - BioR: AZC_0363
>AZC_0362(bioY) Score=4.8 Pos=28 [Azorhizobium caulinodans ORS 571]
TTATCTATAA
>AZC_0363(bioR) Score=4.8 Pos=-13 [Azorhizobium caulinodans ORS 571]
TTATCTATAA
# TF - KglR: AZC_4404
>AZC_4404(kglR) Score=5.6 Pos=-163 [Azorhizobium caulinodans ORS 571]
GTTTTAGATCGGTCTAAAAA
# TF - IdnR: AZC_2611
>AZC_2613(idnD) Score=6 Pos=-62 [Azorhizobium caulinodans ORS 571]
GCATGTTATCGGTAACAAAA
>AZC_2614(idnO) Score=6 Pos=-96 [Azorhizobium caulinodans ORS 571]
TTTTGTTACCGATAACATGC
# TF - SMb20039: AZC_0292
>AZC_0293(COG697) Score=10.8 Pos=-110 [Azorhizobium caulinodans ORS 571]
AACTGTGTGGT-(8)-TCCATACTGTT-(6)-AACCGTATGGC
# TF - PdxQ3: AZC_4467
>AZC_4466(COG5457) Score=10.7 Pos=-98 [Azorhizobium caulinodans ORS 571]
ATTGCTCC-(1)-AGTGCAAT-(6)-ATTGCGCT
# TF - OapR: AZC_0730
>AZC_0729(oapT) Score=9.4 Pos=-80 [Azorhizobium caulinodans ORS 571]
CACTGTATCGGT-(6)-ACCATAACAGCT-(17)-ATCTGTATATAT
# TF - PdxW: AZC_0405
>AZC_0404(pdxO) Score=9.6 Pos=-90 [Azorhizobium caulinodans ORS 571]
GATTGGTC-(16)-TATTGGAT-(9)-GTCCAATC
# TF - MdcY: AZC_3296
>AZC_3296(mdcY) Score=4.3 Pos=-42 [Azorhizobium caulinodans ORS 571]
ATGTATGCAA
>AZC_3297(matA) Score=4.3 Pos=-174 [Azorhizobium caulinodans ORS 571]
TTGCATACAT
# TF - FnrN/FixK/AadR: AZC_4653
>AZC_0334(hemA) Score=4.7 Pos=-84 [Azorhizobium caulinodans ORS 571]
CACTTGATCGAGCGCAAGGG
>AZC_4523(ccoN) Score=5 Pos=-93 [Azorhizobium caulinodans ORS 571]
CCTTTGACTTGTATCAAGGT
>AZC_3742(ompW) Score=5.5 Pos=-61 [Azorhizobium caulinodans ORS 571]
GATTTGATCTAGGTCAAACT
>AZC_0320(adhA) Score=5.3 Pos=-175 [Azorhizobium caulinodans ORS 571]
GCGTTGATCCGCATCAAGCA
>AZC_0320(adhA) Score=5.5 Pos=-67 [Azorhizobium caulinodans ORS 571]
AGCTTGATGCGGATCAAGGT
>AZC_0581(cydR) Score=5.1 Pos=-55 [Azorhizobium caulinodans ORS 571]
AGGTTGCTCCAGATCAAACC
# TF - GulR: AZC_2639
>AZC_2640(gudP) Score=5.5 Pos=-304 [Azorhizobium caulinodans ORS 571]
ATCAATCCAAAAAATGGAATGAT
>AZC_2638(kdgD) Score=5.4 Pos=-70 [Azorhizobium caulinodans ORS 571]
ACTGATCCCAAAAACGCATCGAT
# TF - FixJ: AZC_4654
>AZC_4653(fixK) Score=4 Pos=-118 [Azorhizobium caulinodans ORS 571]
CTCCGTAAAATCACCTAC
>AZC_4653(fixK) Score=4.6 Pos=-104 [Azorhizobium caulinodans ORS 571]
CTACGCAATACTACTTAA
>AZC_4653(fixK) Score=3.7 Pos=-90 [Azorhizobium caulinodans ORS 571]
TTAAGGGCTGGGCCCTAA
>AZC_1049(nifA) Score=3.1 Pos=-114 [Azorhizobium caulinodans ORS 571]
CTCCGCGGTTTCCATTAT