# TF - BirA: LHK_03252
>LHK_00097(bioB) Score=7 Pos=-900 [Laribacter hongkongensis HLHK9]
CTGTTTATA--------------GTTTGACAG
>LHK_00099(COG1040) Score=7 Pos=12 [Laribacter hongkongensis HLHK9]
CTGTCAAAC--------------TATAAACAG
# TF - NrdR: LHK_00731
>LHK_01803(nrdA) Score=5.5 Pos=-69 [Laribacter hongkongensis HLHK9]
ACACAACATCTTGTGC
>LHK_01596(nrdJa) Score=5.3 Pos=-158 [Laribacter hongkongensis HLHK9]
AAACAACATCTAGTGT
>LHK_02258(nrdD) Score=5.6 Pos=-80 [Laribacter hongkongensis HLHK9]
ACACAACATCTTGTGT
# TF - LldR: LHK_02842
>LHK_02843(lldE) Score=6.2 Pos=-36 [Laribacter hongkongensis HLHK9]
AATTGGCCTGACCAATT
>LHK_02842(lldR) Score=5.7 Pos=-229 [Laribacter hongkongensis HLHK9]
AATTGGTCAGGCCAATT
# TF - IscR: LHK_02866
>LHK_02866(iscR) Score=6.4 Pos=-63 [Laribacter hongkongensis HLHK9]
ATGGTTGACTAAATTAGTCGGGTTT
# TF - NtrC: LHK_01906
>LHK_01876(glnA) Score=5.4 Pos=-226 [Laribacter hongkongensis HLHK9]
TTCACCATTTTGGTGCA
>LHK_01876(glnA) Score=5.1 Pos=-255 [Laribacter hongkongensis HLHK9]
TGCACCATTGATGTGCA
# TF - ModE: LHK_02456
>LHK_02456(modE) Score=6 Pos=-28 [Laribacter hongkongensis HLHK9]
CGTTATATAGTCGTGTATATTACG
# TF - LiuR: LHK_00207
>LHK_00209(lcfA) Score=5.4 Pos=-62 [Laribacter hongkongensis HLHK9]
GTTTACGTTCACGTAAAT
>LHK_00208(ivdG) Score=4.8 Pos=-54 [Laribacter hongkongensis HLHK9]
GTTAACGTAAACGTATAT
>LHK_00208(ivdG) Score=6.6 Pos=-60 [Laribacter hongkongensis HLHK9]
ATTGACGTTAACGTAAAC
>LHK_00206(ivdA) Score=5.1 Pos=-33 [Laribacter hongkongensis HLHK9]
GTTTCCGTTTACGTAAAA
>LHK_02055(liuA) Score=6.1 Pos=-80 [Laribacter hongkongensis HLHK9]
GTTGACGTTCACGTAAAC
>LHK_00207(liuR) Score=5.6 Pos=-116 [Laribacter hongkongensis HLHK9]
ATATACGTTTACGTTAAC
>LHK_00207(liuR) Score=5.7 Pos=-110 [Laribacter hongkongensis HLHK9]
GTTTACGTTAACGTCAAT
# TF - PsrA: LHK_01607
>LHK_01607(psrA) Score=5.4 Pos=-38 [Laribacter hongkongensis HLHK9]
ATTAAAACGTAAGTTTCAAA
>LHK_01607(psrA) Score=5.6 Pos=-25 [Laribacter hongkongensis HLHK9]
TTTCAAACAACTGTTTGGAT
>LHK_01608(fadL) Score=5.6 Pos=-142 [Laribacter hongkongensis HLHK9]
TATAAAACGGCTGTTTGAAA
>LHK_01608(fadL) Score=4.9 Pos=-63 [Laribacter hongkongensis HLHK9]
TCTCAAACGATCGTTTGCCT
>LHK_02202 Score=5.6 Pos=-22 [Laribacter hongkongensis HLHK9]
TTTCAAACGATCGTTTGCTT
>LHK_01931(fadD) Score=5.6 Pos=-107 [Laribacter hongkongensis HLHK9]
AATCAAACGACCGTTTGGCT
>LHK_02913(etfB) Score=6.1 Pos=-187 [Laribacter hongkongensis HLHK9]
ATTCAAACGACTGTTTGAAG
>LHK_00049(fadH) Score=6 Pos=43 [Laribacter hongkongensis HLHK9]
AATCAAACGGTCGTTTGACA
>LHK_02264(acdH) Score=6 Pos=-54 [Laribacter hongkongensis HLHK9]
ATCCAAACATTCGTTTGAAA
>LHK_02264(acdH) Score=5.5 Pos=-21 [Laribacter hongkongensis HLHK9]
TTTCAAACGGTCGTTTAACC
>LHK_00066 Score=5.9 Pos=-68 [Laribacter hongkongensis HLHK9]
ATTCAAACAGTCGTTTGATG
>LHK_02892(etfD) Score=5.9 Pos=-97 [Laribacter hongkongensis HLHK9]
ATTCAAACGGCCGTTTGACG
>LHK_02384 Score=5.8 Pos=-88 [Laribacter hongkongensis HLHK9]
GTTCAAACGATCGTTTTATT
>LHK_02406(scp) Score=5.8 Pos=-40 [Laribacter hongkongensis HLHK9]
TATCAAACACTCGTTTGATA
>LHK_00568(fabF) Score=5.4 Pos=-90 [Laribacter hongkongensis HLHK9]
AGGCAAACGCCCGTTTGACA
# TF - PhnF: LHK_01588
>LHK_01588(phnF) Score=6.2 Pos=-114 [Laribacter hongkongensis HLHK9]
TATAAACGTATAGACGTATCCA
>LHK_01587(phnG) Score=6.2 Pos=-48 [Laribacter hongkongensis HLHK9]
TGGATACGTCTATACGTTTATA
# TF - Zur2: LHK_01344
>LHK_01344(zur2) Score=5.6 Pos=-47 [Laribacter hongkongensis HLHK9]
GTTACGGCATAACATAACGAAAT
# RNA - TPP
>LHK_02662(thiM) Score=50.7 Pos=-151 [Laribacter hongkongensis HLHK9]
CAACCGTGACTCGGGGTGTCGTGTGGCCTGGCCACCGGCTGAGACTTTACCCGCATTCACCTGATCTGGGTCATGCCAGCGTAGGGAGGTCACGATGGAAGCGG
# TF - HrcA: LHK_01206
>LHK_01878(groS) Score=7 Pos=-97 [Laribacter hongkongensis HLHK9]
TTAGCACTCGTGAAGCGGGAGTGCTAA
>LHK_00659(groS) Score=6.9 Pos=-97 [Laribacter hongkongensis HLHK9]
TTGGCACTCGTGAGTGATGAGTGCTAA
>LHK_00231(rpoH) Score=6.7 Pos=-55 [Laribacter hongkongensis HLHK9]
TTATCACTCAACCAGGCCGAGTGCTAA
# TF - CadR-PbrR: LHK_00450
>LHK_00449(cadA) Score=6.2 Pos=-48 [Laribacter hongkongensis HLHK9]
ACCCTATAGTAGCTCCAGGGT
# RNA - SAH_riboswitch
>LHK_00674(ahcY) Score=54.2 Pos=-134 [Laribacter hongkongensis HLHK9]
GCCGAGGGGCGCTGCAAGGTGAAGGTCTACCCCAGGCTCGGCTTGAATTTGCAACGGCGCTCACCCACAAC
# TF - MetR: LHK_00468
>LHK_00468(metR) Score=4.3 Pos=10 [Laribacter hongkongensis HLHK9]
ATGGTTTTATTTCAT
>LHK_00468(metR) Score=5.8 Pos=31 [Laribacter hongkongensis HLHK9]
ATGAATTTTATTCAT
>LHK_00469(metE) Score=5.8 Pos=-97 [Laribacter hongkongensis HLHK9]
ATGAATAAAATTCAT
>LHK_00469(metE) Score=4.3 Pos=-76 [Laribacter hongkongensis HLHK9]
ATGAAATAAAACCAT
# TF - YdcR: LHK_02098
>LHK_02096(COG0348) Score=7.9 Pos=-120 [Laribacter hongkongensis HLHK9]
ATCTGTTCCTATGAA----------TCCTGAATCTGTCTG
# TF - Daro_1932: LHK_00949
>LHK_00950 Score=19.2 Pos=-142 [Laribacter hongkongensis HLHK9]
ACAGTGACAGATTG-(11)-AGGGTGACAGTTGC-(9)-GCAACTGTACTGCT-(11)-CCGGGTGTGGCTGT
# TF - SdhR: LHK_02422
>LHK_02422(sdhR) Score=6.2 Pos=-62 [Laribacter hongkongensis HLHK9]
TTTTATATCTTATATAAGACATGCAT
>LHK_02423(mdh) Score=6.2 Pos=-189 [Laribacter hongkongensis HLHK9]
ATGCATGTCTTATATAAGATATAAAA