# TF - NadQ: NGR_c08530
>NGR_c08490(nadA) Score=6.8 Pos=-54 [Rhizobium sp. NGR234]
TTATGCTCATATTGAGCATAA
# TF - NrdR: NGR_c09580
>NGR_c15550(nrdJ) Score=5.5 Pos=-155 [Rhizobium sp. NGR234]
ATACTATATTTAGTGT
>NGR_c15550(nrdJ) Score=4.8 Pos=-400 [Rhizobium sp. NGR234]
ACACAAGATATAGCGC
>NGR_c15550(nrdJ) Score=4.2 Pos=-124 [Rhizobium sp. NGR234]
CCACAAGATACTGGAG
# TF - SahR: NGR_c21320
>NGR_c33880(ahcY) Score=6.1 Pos=-97 [Rhizobium sp. NGR234]
ATATAAAGACCTCTTTATAT
>NGR_c21320(sahR) Score=6.8 Pos=-37 [Rhizobium sp. NGR234]
ACATAAACATATCTTTATGT
>NGR_c30540(metH) Score=6.9 Pos=-67 [Rhizobium sp. NGR234]
ACATAAAGATATCTTTATGT
>NGR_c18290(bhmT) Score=6.9 Pos=-10 [Rhizobium sp. NGR234]
ACATAAAGATATGTTTATAT
>NGR_c00480(metK) Score=6.6 Pos=-93 [Rhizobium sp. NGR234]
ATATAAAGATATATTTATGT
# TF - Zur: NGR_c17620
>NGR_c17640(znuC2) Score=5.3 Pos=-8 [Rhizobium sp. NGR234]
TGCACGTAATGTTATTACATCAA
>NGR_c17650(znuA2) Score=5.4 Pos=-204 [Rhizobium sp. NGR234]
TTGATGTAATAACATTACGTGCA
# TF - NnrR: NGR_c09970
>NGR_c09900(PF00034) Score=4.2 Pos=-169 [Rhizobium sp. NGR234]
CTTTGACCAATATCAAGG
>NGR_c09900(PF00034) Score=4.7 Pos=-123 [Rhizobium sp. NGR234]
GTTTGCTCGGCGTCAAAG
>NGR_c09950(nirK) Score=4.7 Pos=-195 [Rhizobium sp. NGR234]
CTTTGACAATTGGCAAAG
>NGR_c09950(nirK) Score=4.7 Pos=-91 [Rhizobium sp. NGR234]
ATTTGTTCCACCTCAAAG
>NGR_c09980(azu1) Score=4.4 Pos=-91 [Rhizobium sp. NGR234]
GTTTGACAGACATCAAAG
>NGR_c09830 Score=5.1 Pos=-63 [Rhizobium sp. NGR234]
CTTTGCGCTTGATCAAAG
>NGR_c09940(nnrS) Score=4.7 Pos=-177 [Rhizobium sp. NGR234]
CTTTGAGGTGGAACAAAT
>NGR_c09940(nnrS) Score=4.7 Pos=-73 [Rhizobium sp. NGR234]
CTTTGCCAATTGTCAAAG
>NGR_c09840(norE) Score=5.1 Pos=-69 [Rhizobium sp. NGR234]
CTTTGATCAAGCGCAAAG
>NGR_c09800(nnrX) Score=5.1 Pos=-80 [Rhizobium sp. NGR234]
CTTTGCGCTGGCTCAAAT
>NGR_c09810(ubiD) Score=5.1 Pos=-50 [Rhizobium sp. NGR234]
ATTTGAGCCAGCGCAAAG
>NGR_c09890(hemN) Score=4.7 Pos=-129 [Rhizobium sp. NGR234]
CTTTGACGCCGAGCAAAC
>NGR_c09890(hemN) Score=4.2 Pos=-83 [Rhizobium sp. NGR234]
CCTTGATATTGGTCAAAG
>NGR_c09850(norC) Score=4.5 Pos=-142 [Rhizobium sp. NGR234]
GTTTGCAGAAACGCAAAG
# TF - HutC: NGR_b23610, NGR_c27380
>NGR_c27390(hutF) Score=4.4 Pos=-34 [Rhizobium sp. NGR234]
TAGTTCCATATACAACCA
>NGR_b13270(hutI) Score=5.2 Pos=-42 [Rhizobium sp. NGR234]
ATTATGTATATACATTAT
>NGR_c27380(hutC) Score=4.4 Pos=1 [Rhizobium sp. NGR234]
TGGTTGTATATGGAACTA
# TF - RirA: NGR_c03450
>NGR_c21740(fhuA2) Score=5.4 Pos=-100 [Rhizobium sp. NGR234]
CATGACTTTAATAGTCATA
>NGR_c21740(fhuA2) Score=5 Pos=-57 [Rhizobium sp. NGR234]
CATGAGTGATTAAGTCATC
>NGR_c13490(exbB) Score=4.6 Pos=-132 [Rhizobium sp. NGR234]
CATGATTATTATACTCCAG
>NGR_c24540(PF10087) Score=4.2 Pos=-124 [Rhizobium sp. NGR234]
CTTTACTATGATTATCAAG
>NGR_c24540(PF10087) Score=4.9 Pos=-149 [Rhizobium sp. NGR234]
TATGATTAAAAAACTCATG
>NGR_c24560 Score=4.9 Pos=-118 [Rhizobium sp. NGR234]
CTTGACTGCATTACTCATA
>NGR_c24560 Score=4 Pos=-80 [Rhizobium sp. NGR234]
CCGGATAGTTGCAGTCAAG
>NGR_c23520(hmuR) Score=4.5 Pos=-1 [Rhizobium sp. NGR234]
ATTGATTTTTTTACTCATG
>NGR_c24570(hmuS) Score=4.9 Pos=-44 [Rhizobium sp. NGR234]
TATGAGTAATGCAGTCAAG
>NGR_c24570(hmuS) Score=4 Pos=-82 [Rhizobium sp. NGR234]
CTTGACTGCAACTATCCGG
>NGR_b11200(irp6A) Score=5.1 Pos=-59 [Rhizobium sp. NGR234]
GTTGACTGGTAAAGTCATG
>NGR_c31850(bfd) Score=3.9 Pos=-11 [Rhizobium sp. NGR234]
GTTGACGGCAAATGTCCTC
>NGR_c09100(PF00501) Score=4.1 Pos=-41 [Rhizobium sp. NGR234]
CTTGACGACGAGAGTCAGC
>NGR_c23530(PF06904) Score=4.5 Pos=-138 [Rhizobium sp. NGR234]
CATGAGTAAAAAAATCAAT
>NGR_c15400(sufS2) Score=4.5 Pos=-172 [Rhizobium sp. NGR234]
CTTGACGAAAGCAGTCAGC
>NGR_c07330(cycF) Score=5 Pos=-190 [Rhizobium sp. NGR234]
CATGAATTTAAAATTCATG
# TF - Irr: NGR_c35780
>NGR_c00370(fssA) Score=6 Pos=-59 [Rhizobium sp. NGR234]
ATTTTTGAATTATTCTAAAGA
>NGR_c36600(iprA) Score=5.4 Pos=-114 [Rhizobium sp. NGR234]
AATTTGAAAATGTTCTAAACT
>NGR_c31850(bfd) Score=5.4 Pos=-62 [Rhizobium sp. NGR234]
AGATTAGAACGACTCTAATAT
>NGR_c30700(hemA) Score=5.7 Pos=-112 [Rhizobium sp. NGR234]
GTTTTGGAATAGTTCAAAACT
>NGR_c03440(fbpA) Score=5.6 Pos=-135 [Rhizobium sp. NGR234]
AGTTTGGAACAATTCCAAAAG
>NGR_c36170(mbfA) Score=6.1 Pos=-32 [Rhizobium sp. NGR234]
TCTTTAGAATTATTCTAAAGA
>NGR_c23520(hmuR) Score=4 Pos=-73 [Rhizobium sp. NGR234]
TGTTTCAAATTGTGCTGAAAC
>NGR_c03450(rirA) Score=5.6 Pos=-72 [Rhizobium sp. NGR234]
CTTTTGGAATTGTTCCAAACT
>NGR_b11200(irp6A) Score=5.3 Pos=-86 [Rhizobium sp. NGR234]
TGTTTGGAAGGGTTCTAAAAG
>NGR_c28500(hemH) Score=5.4 Pos=-61 [Rhizobium sp. NGR234]
TTTTTAGAAGGATTTGAAACT
>NGR_c15400(sufS2) Score=6.2 Pos=-140 [Rhizobium sp. NGR234]
ACTTTAGAACCGTTCAAAACT
# TF - NagQ: NGR_c35320
>NGR_c35300(murQ) Score=6.3 Pos=-42 [Rhizobium sp. NGR234]
TGGTATTTTTTTGGCATT
>NGR_c35310(nagK) Score=-1.5 Pos=-172 [Rhizobium sp. NGR234]
AATGCCAAAAAAATACCA
# TF - GlcC: NGR_c03890
>NGR_c03890(glcC) Score=5.1 Pos=-101 [Rhizobium sp. NGR234]
AAGTGGACAATCGATTTGACCACTT
>NGR_c23940(lldD) Score=4.6 Pos=-202 [Rhizobium sp. NGR234]
AAGAGGTCAATTTTTTTGACCTCTT
>NGR_c03900(mlr6914) Score=6.3 Pos=-134 [Rhizobium sp. NGR234]
AAGTGGTCAAATCGATTGTCCACTT
# TF - NtrC: NGR_c12970
>NGR_b17280(narK) Score=4.1 Pos=-299 [Rhizobium sp. NGR234]
TGCCCATCAAATGGGCA
>NGR_b17280(narK) Score=3.9 Pos=-269 [Rhizobium sp. NGR234]
AGGCTAATATTTGGTCA
>NGR_b11400(nrtC) Score=3.8 Pos=-338 [Rhizobium sp. NGR234]
CGCTGCTTTTTTAAGCA
>NGR_b11400(nrtC) Score=4.3 Pos=-303 [Rhizobium sp. NGR234]
CGCACAATTATTGACCA
>NGR_b15160(nrtA) Score=4.4 Pos=-297 [Rhizobium sp. NGR234]
CGCACAAAATTTCATCA
>NGR_b15160(nrtA) Score=3.8 Pos=-269 [Rhizobium sp. NGR234]
TGCCTATTTCTGAGGCA
>NGR_c31500(glnK) Score=3.9 Pos=-218 [Rhizobium sp. NGR234]
TGCCTGTTTTTTAATCT
>NGR_b03900(uctA) Score=4.7 Pos=-286 [Rhizobium sp. NGR234]
TGATCATTTTATAAGCA
>NGR_b03900(uctA) Score=4.6 Pos=-265 [Rhizobium sp. NGR234]
TGCACAAATTATGGGCG
>NGR_c12950(nifR3) Score=4 Pos=-25 [Rhizobium sp. NGR234]
TGTCTAAAAATAGTGCA
>NGR_c14750(glnB) Score=4.3 Pos=-287 [Rhizobium sp. NGR234]
TGATGACTTATTATGCA
>NGR_c14750(glnB) Score=4.1 Pos=-255 [Rhizobium sp. NGR234]
TGCTCAAATAACAGGCT
# TF - Mur: NGR_c31010
>NGR_c31020(sitA) Score=5 Pos=-82 [Rhizobium sp. NGR234]
GTTGCAAATGGTTCTCATG
# TF - ModE: NGR_c29870
>NGR_c29840(modA) Score=5.5 Pos=-82 [Rhizobium sp. NGR234]
ATTGTATTTCTGCGGATATAGC
# TF - LexA: NGR_c15070
>NGR_c15070(lexA) Score=5.5 Pos=18 [Rhizobium sp. NGR234]
GTTCTTGATTTGTTT
>NGR_c15570(uvrA) Score=5.5 Pos=-141 [Rhizobium sp. NGR234]
GTTCTTTCTTTGTTC
>NGR_c27930(ruvC) Score=5.4 Pos=-58 [Rhizobium sp. NGR234]
GTTTTTGTTTTGTTC
>NGR_c36840(yifB) Score=4.8 Pos=-97 [Rhizobium sp. NGR234]
GTTCTATTATTGTTC
>NGR_c04530(PF04055) Score=5.6 Pos=-81 [Rhizobium sp. NGR234]
GTTCTTGCTTTGTTC
>NGR_c20770(uvrD) Score=0.3 Pos=-58 [Rhizobium sp. NGR234]
GAATAAAAGAAGAAC
>NGR_c00550(rmuC) Score=5.3 Pos=-50 [Rhizobium sp. NGR234]
GTTCTTGTTTTGATC
>NGR_c10730(dnaE) Score=0.8 Pos=-254 [Rhizobium sp. NGR234]
GAACAAAAAAAGAAC
>NGR_c16470(recA) Score=1.9 Pos=-74 [Rhizobium sp. NGR234]
GAACAAAACATGTAC
>NGR_c16470(recA) Score=2.1 Pos=-142 [Rhizobium sp. NGR234]
GAACAGGAATCGAAC
>NGR_b14150(uvrD2) Score=4.6 Pos=-90 [Rhizobium sp. NGR234]
GTTCCTTATCCGTTC
>NGR_c12710(parE) Score=4.6 Pos=-134 [Rhizobium sp. NGR234]
ATTCGCCTTTTGTTC
>NGR_c17500(uvrB) Score=4.5 Pos=-61 [Rhizobium sp. NGR234]
GTTTCCCTTTTGTAC
>NGR_c21340(rna) Score=5.1 Pos=-30 [Rhizobium sp. NGR234]
GTTCTCGTTATGTTT
>NGR_c10750(dinP) Score=5 Pos=-143 [Rhizobium sp. NGR234]
GTTCAACATTTGTTC
>NGR_c31880(imuA) Score=1.8 Pos=-36 [Rhizobium sp. NGR234]
GAACATAACATGAAC
>NGR_c15580(ssb) Score=0.5 Pos=-157 [Rhizobium sp. NGR234]
GAACAAAGAAAGAAC
# TF - LiuR: NGR_c12400
>NGR_c04900(acdH2) Score=6.4 Pos=-187 [Rhizobium sp. NGR234]
GTTGACGTTTACGTAAAA
>NGR_c01690(acdH) Score=6.3 Pos=-135 [Rhizobium sp. NGR234]
TTTGACGTTTACGCAAAC
>NGR_c01690(acdH) Score=4.6 Pos=-129 [Rhizobium sp. NGR234]
GTTTACGCAAACGTCAAA
>NGR_c31300(mdh) Score=5.6 Pos=-162 [Rhizobium sp. NGR234]
TCTTACCTTTACGTAAGA
>NGR_c12400(liuR1) Score=5.6 Pos=-58 [Rhizobium sp. NGR234]
TTTGACTTTTACGTCAAA
>NGR_c07940(etfD) Score=5.5 Pos=-125 [Rhizobium sp. NGR234]
ATTTACGTTTACGTTCAA
>NGR_c07940(etfD) Score=5 Pos=-119 [Rhizobium sp. NGR234]
GTTTACGTTCAAGTAAGA
>NGR_c01180(fadD) Score=6.1 Pos=-147 [Rhizobium sp. NGR234]
ATTGACGTTTACGTCAAA
>NGR_c07190(SMc00041) Score=4.8 Pos=-44 [Rhizobium sp. NGR234]
ATTTACTTTGACGTCAAC
>NGR_c07190(SMc00041) Score=5.3 Pos=-38 [Rhizobium sp. NGR234]
TTTGACGTCAACGTCAAA
>NGR_c01400(PF03060) Score=4.6 Pos=-41 [Rhizobium sp. NGR234]
GTTTACGCAAACGTCAAA
>NGR_c08080(PF09917) Score=5.2 Pos=-118 [Rhizobium sp. NGR234]
ATTTACCTTTACGTACGC
>NGR_c01400(PF03060) Score=6.1 Pos=-47 [Rhizobium sp. NGR234]
ATTGACGTTTACGCAAAC
>NGR_c26900(etfB) Score=5.8 Pos=-167 [Rhizobium sp. NGR234]
TCTTACGTGTACGTAAAC
# TF - XylR: NGR_c24210
>NGR_c24220(xylF) Score=5.5 Pos=-126 [Rhizobium sp. NGR234]
ATTTTCTCGACTGTCGAGAAAAA
# TF - RutR: NGR_c24820
>NGR_c35400(pntD) Score=5.2 Pos=-159 [Rhizobium sp. NGR234]
TTTTTACCATCCGAAAAATT
>NGR_b02360(pytM) Score=5.3 Pos=-62 [Rhizobium sp. NGR234]
CATTGACCAAGTGGTAAAAA
>NGR_c24760(pydX) Score=5.8 Pos=-70 [Rhizobium sp. NGR234]
ATTTTACCGTTTGATAAAAA
>NGR_c24830(pydC) Score=5.5 Pos=-147 [Rhizobium sp. NGR234]
TGTTTACCAACCGGTCAAAT
>NGR_c24820(rutR) Score=5.7 Pos=-153 [Rhizobium sp. NGR234]
ATTTGACCGGTTGGTAAACA
>NGR_c34500(pntA) Score=5.3 Pos=-78 [Rhizobium sp. NGR234]
CTTATACCAAATGGTAAAAA
# TF - PhnF: NGR_b21000
>NGR_b21010(phnG) Score=6.2 Pos=-34 [Rhizobium sp. NGR234]
TTGTCTAGATCAATAGACAT
>NGR_b21000(phnF) Score=6.2 Pos=-73 [Rhizobium sp. NGR234]
ATGTCTATTGATCTAGACAA
# TF - PaaR: NGR_c26120
>NGR_c26200(blr2890) Score=5.7 Pos=-53 [Rhizobium sp. NGR234]
TCTGACCGATCGGTCGGTTAAT
>NGR_c26090(paaF) Score=6.5 Pos=-70 [Rhizobium sp. NGR234]
ATTGACTGACCGGTCGGTTTAT
>NGR_c26080(paaG) Score=6.5 Pos=-51 [Rhizobium sp. NGR234]
ATAAACCGACCGGTCAGTCAAT
# TF - EutR: NGR_c21480
>NGR_c21470(eutA) Score=5.7 Pos=-93 [Rhizobium sp. NGR234]
ACTGAAAAGATCGTTTCAGA
>NGR_c21470(eutA) Score=5.7 Pos=-51 [Rhizobium sp. NGR234]
CGTGAAGAATTCTTTTCACG
>NGR_c21480(eutR) Score=5.7 Pos=-136 [Rhizobium sp. NGR234]
CGTGAAAAGAATTCTTCACG
>NGR_c21480(eutR) Score=5.7 Pos=-94 [Rhizobium sp. NGR234]
TCTGAAACGATCTTTTCAGT
# RNA - Cobalamin
>NGR_b02510(btuF) Score=117 Pos=-422 [Rhizobium sp. NGR234]
CTAAGCAAGCCGACGACGGTTCCCCTACGACGAAGCGAAGGGGATTAATAGGGAACACGGTGCGGACGACCCAACAGGGACCAAGACCGTGGCTGCCCCCGCAACTGTGAGCGGATTGCCGCCCATCCTCGTGACGCGCAAGCGTCGTGCCACTGCGAATTCGATCGCGGGAAGGCAGGTGGACGGCAGATATCCGCAAGCCAGGAGACCTGCCGTCATGCGTTCACTCCAATC
>NGR_c26320(ardX) Score=109.2 Pos=-327 [Rhizobium sp. NGR234]
CTCATATGAACACGCTTGAGGTGCTGACCGGTTTTCGGACCGGTCGGAGAATTGGGAAGCCGGTTTGATGCCGGCGCTGCCCCCGCAACGGTAGCAGAACTCAAATGCGACGGAAGTCCACTGGGCAAGATGCCTGGGAAGGAGTCGCAGGTCCGAAAGGACGGTTCTGGAGCCCGGAAACCAGCCTCGACGTTTTGAACTCGA
>NGR_c21910(cbtB) Score=56 Pos=-314 [Rhizobium sp. NGR234]
ATCATCGCTGATCGGTTGGTTCCCGGAATGCGAACGCGTTTCGGGAGTAAACGGGAACGTGACGGATGGACCCAAGCTGGGCATCTCAATCACGGCCGACCCCGCGACTGTAGAGCGGCGTGAATTTGTCGTTCCGGAGCAATCCGGGAGAAGCCACTGGGTATAAACCGCGAGAGGGCGGTTCGAATCTGGGAAGGCGAGGCAAGTTCCTTGGTGTCTAATCTAGACATCTGACGCCGTGAGCCAGGAAACCTGCCAAGCGATACGGGCATAGTGC
>NGR_c16920(bluB) Score=78.6 Pos=-257 [Rhizobium sp. NGR234]
TGCCCATATGCGGCCGTCAGGTGCCCGCTTGCTGCGGGAGAATCGGGAAGCCGGTTGAATTCCGGCACGTGCCCAACGCTGTGATGGGGACGGCTGCGCCAAGAGAGCTGTGAAGGTTTTCAGAGCTTTGCCACTGGGTCTTGAAGCGATCTGGGAAGGTGGTTCGGCCGAGTGATCCAAAGTCAGAAGACCGGCCTGGCAAGATAGACCGGCC
# RNA - mini-ykkC
>NGR_c12200(ykkc) Score=19.2 Pos=-75 [Rhizobium sp. NGR234]
GATGCAGACGGCTGCACGGATCTACAGATCCGAACACCCGCGGGGACGGCCTCGCT
# RNA - FMN
>NGR_c21540(ribH2) Score=97.8 Pos=-252 [Rhizobium sp. NGR234]
CGCGTTCTCAGGGCGGGGCGGAATTCCCCACCGGCGGTAGCGATCGGCGGATCTAACGGTCCGGTGGTCGAAGCCCGCGAGCGCTTCGAGGCCTACCTCGAAGGTCAGCAGATCCGGTCAGATTCCGGAGCCGACGGTTACAGTCCGGATGGAAGAGAGCAAGCAG
# RNA - TPP
>NGR_b18410(thiD) Score=68.3 Pos=-162 [Rhizobium sp. NGR234]
CCTCCATTCCGAGGGGAGCGCCGGGCGGCGCTGAGACGGCGGTGAGCCGGACCCTTGAACCTGATCCGGGTCATGCCGGCGTAGGAACGGAACGAGGCTGCCCT
>NGR_b02930(thiC) Score=73.1 Pos=-210 [Rhizobium sp. NGR234]
GTCCATTCACCAGGGGGGTCCCGGCAAGGGGCTGAGATACTGCTAGAGCGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCGGACGTTTGATG
>NGR_c32610(thiB) Score=61.3 Pos=-162 [Rhizobium sp. NGR234]
CTGCTCTAACGGGGTGCCTGAGGCCGCTTGCGGTCCCATGGCTGAGAGGCTTCGAGCCAACCCGCGGAACCTGATCCGGCTCGTACCGGCGGAGGGATTAGAAGCGATCGGAACGA
# RNA - serC
>NGR_c27710(serC) Score=71 Pos=-51 [Rhizobium sp. NGR234]
ACGGCGGGACACCCCTCCCCAACGAGGGGCTTCTATCTGAGAGGATAGCATAT
# RNA - speF
>NGR_c29260(speF) Score=312.9 Pos=-406 [Rhizobium sp. NGR234]
CCTTGCCCAAAGTCGCACGTGCCTGTGGGTGTCCGCCGACCCTCGATTAGGTGAGGATCTCGGTAAGGTACCTGGAACTAACCCCTCCAGTCGCTATTCCGGCCAACCGGGAAATGCGAGGACATCTTGAAGCAACGACGGTGCGGGCCTTTCTGGTGTCTGCCGGCTCTCCAACAGCCGGGGTTACTGAAGAGGCACACCTTCATTGCCGGAAGTGCGGTTGGGTTATTCCCTCCAATCCATGGCAGACAAAGCCGAGTCTTAGCCTTCGCGGGCTTCGATTCACCGTTACGCGCATCGAGCGCATGCAT
# RNA - Glycine
>NGR_c15490(gcvT) Score=46.9 Pos=142 [Rhizobium sp. NGR234]
CCGGTAGGACTCTGGAGAGAAGCGGTTACGCTCGCCGAAGGGATAACAATCTCAGGCAAACGGACAGAGGGGGCTCG
>NGR_c15490(gcvT) Score=59.8 Pos=55 [Rhizobium sp. NGR234]
GACGATCTTGTTGGGAGAAACCGGTTCAATCCGGTGCCGAAGGAGCAACCGCCCCGGAAACTCTCAGGCCAAAGGACCAGCAAGG
# RNA - SAM_alpha
>NGR_c31610(metA) Score=79.5 Pos=-138 [Rhizobium sp. NGR234]
AGCGTTCCTGTGGTGATTTGGCCGGCCGGCTTGCAGCCACGTTAAACAAATCGCTAAAGGGCCGAGGAAAGAACGGATT
>NGR_c01560(metY) Score=83.2 Pos=-123 [Rhizobium sp. NGR234]
AGCTTTATCCCGTGGTGATTTGGCCGGTCGGCTTGCAGCCACGTTAAACAAGTAGCTAAAAAGGCCGGGTGTCAAACCGG
# RNA - ykkC-yxkD
>NGR_b03900(uctB) Score=82.3 Pos=-202 [Rhizobium sp. NGR234]
CTGCAGATGTTTCTAGGGTTCCGATGCCGTCAGGGCATGTCTGGACCGAGAGAAACCTCCGGTGGGGAGACATCCACCGGGTCCACGGCGGGATAAAAGCCCGGGAGGC
# RNA - ybhL
>NGR_c32420(ybhL) Score=72.4 Pos=-99 [Rhizobium sp. NGR234]
ACAGGCATGCTGGAGCCCCGCAGCGGCGCCTGGGCGTGCGCTGGCACAGACACCTGCCGCCCGACACCGTAGTTCCAATCGGGGCTTAA
# TF - RhaR: NGR_c02440
>NGR_c02430(rhaEW) Score=6.1 Pos=-105 [Rhizobium sp. NGR234]
CTGATCG---TTGATTG
>NGR_c02440(rhaR) Score=5.3 Pos=-53 [Rhizobium sp. NGR234]
CTGATTG---ATGCTCG
>NGR_c02440(rhaR) Score=5.6 Pos=-73 [Rhizobium sp. NGR234]
ATGAAAA---ATGATCG
>NGR_c02440(rhaR) Score=6.1 Pos=-63 [Rhizobium sp. NGR234]
ATGATCG---CTGATTG
>NGR_c02440(rhaR) Score=6.4 Pos=-114 [Rhizobium sp. NGR234]
TCAATCA---ACGATCA
>NGR_c02430(rhaEW) Score=6.4 Pos=-156 [Rhizobium sp. NGR234]
TCAATCA---TCGATCA
>NGR_c02430(rhaEW) Score=5.7 Pos=-115 [Rhizobium sp. NGR234]
ATGAACG---CTGATCG
# TF - NifA: NGR_a01260
>NGR_a00930(nifS) Score=3.8 Pos=-282 [Rhizobium sp. NGR234]
TCGCGCGAGGGCGACA
>NGR_a01190(nifQ) Score=5.1 Pos=-228 [Rhizobium sp. NGR234]
TGTCAGAGAGCCGACA
>NGR_a01270(nifB) Score=5.2 Pos=-144 [Rhizobium sp. NGR234]
TGTCGCGAATTCGACA
>NGR_a00890(nifH) Score=5.3 Pos=-208 [Rhizobium sp. NGR234]
TGTCGGCTCCGCGACA
>NGR_c29850(modB) Score=4 Pos=-55 [Rhizobium sp. NGR234]
CGTCGTGCATCCAACA
>NGR_a02700(cpxP) Score=5.3 Pos=-183 [Rhizobium sp. NGR234]
TGTCGCGTCCGCGACA
>NGR_a01130(nifH) Score=5.3 Pos=-211 [Rhizobium sp. NGR234]
TGTCGGCTCCGCGACA
>NGR_a01190(nifQ) Score=4.9 Pos=-200 [Rhizobium sp. NGR234]
TGTCGTCCTTCCGACA
>NGR_a01200(ahpC1) Score=4.9 Pos=-273 [Rhizobium sp. NGR234]
TGTCGGAAGGACGACA
>NGR_a01200(ahpC1) Score=5.1 Pos=-245 [Rhizobium sp. NGR234]
TGTCGGCTCTCTGACA
>NGR_a01220(fixB) Score=4.8 Pos=-162 [Rhizobium sp. NGR234]
TGTCATGAAGCCGACA
>NGR_a01210(iscN) Score=4.1 Pos=-114 [Rhizobium sp. NGR234]
TGTCGTACAAACGACA
# TF - AglR: NGR_c03090
>NGR_c03090(aglR) Score=6.2 Pos=-30 [Rhizobium sp. NGR234]
TATCCAAAGCGCTTTGAGAG
>NGR_c03090(aglR) Score=6.5 Pos=-235 [Rhizobium sp. NGR234]
TATTCAAAGCGCTTTGAGTT
>NGR_c03100(aglE) Score=6.5 Pos=-83 [Rhizobium sp. NGR234]
AACTCAAAGCGCTTTGAATA
# TF - ThuR: NGR_b23150
>NGR_b23150(thuR) Score=5.2 Pos=-141 [Rhizobium sp. NGR234]
AATTTAAAACGATTGGGCTA
>NGR_b23140(thuE) Score=5.2 Pos=-252 [Rhizobium sp. NGR234]
TAGCCCAATCGTTTTAAATT
>NGR_b23140(thuE) Score=5.1 Pos=-68 [Rhizobium sp. NGR234]
CAGCCAAACCGTTTTCGAAT
# TF - PckR: NGR_c29180
>NGR_c31300(mdh) Score=4.9 Pos=-138 [Rhizobium sp. NGR234]
TGATCTAACCGATTGAATTT
>NGR_c33940(pckA) Score=5.1 Pos=-157 [Rhizobium sp. NGR234]
CGATTCAACCGATTAAAAAA
>NGR_c33940(pckA) Score=5.3 Pos=-127 [Rhizobium sp. NGR234]
TCTTTAAATCGATTAATATA
>NGR_c29180(pckR) Score=4.1 Pos=-65 [Rhizobium sp. NGR234]
TGATTTAAACAGTTTAAAGA
>NGR_c03190(zwf) Score=5.4 Pos=-56 [Rhizobium sp. NGR234]
CTTTTAAATCGATTAGATTA
>NGR_c34840(mgsA) Score=5.3 Pos=-73 [Rhizobium sp. NGR234]
CACTCAAATCGATTTAAATG
>NGR_c31370(sdhC) Score=4.6 Pos=-162 [Rhizobium sp. NGR234]
TCGTCTAATCGATTTTATTT
>NGR_c29340(eda) Score=5.4 Pos=-30 [Rhizobium sp. NGR234]
AGATTCAATCGTTTTAAAAG
>NGR_c28370(COG3931) Score=4.7 Pos=-222 [Rhizobium sp. NGR234]
AACTCTAATCGATTATATTT
>NGR_c28360(COG5480) Score=4.7 Pos=-92 [Rhizobium sp. NGR234]
AAATATAATCGATTAGAGTT
>NGR_c28100(fba) Score=5.1 Pos=-164 [Rhizobium sp. NGR234]
TTTTTAAATCGTTTTAGTCG
>NGR_c28100(fba) Score=5.5 Pos=-183 [Rhizobium sp. NGR234]
TATTTCAAACGATTAAATTT
# TF - HrcA: NGR_c00110
>NGR_c04090(groS) Score=6.8 Pos=-85 [Rhizobium sp. NGR234]
CTAGCACTCTTTAAGAAGGAGTGCTAA
>NGR_b05110(groS) Score=6.8 Pos=-175 [Rhizobium sp. NGR234]
TTAGCACTCCATGTGATGGAGTGCTAA
>NGR_b05810(groS) Score=6.8 Pos=-178 [Rhizobium sp. NGR234]
GTAGCACTCTCAAGTGGCGAGTGCTAA
# TF - MntR: NGR_b14390
>NGR_b14390(mntR) Score=6.2 Pos=-141 [Rhizobium sp. NGR234]
AATATAGCAAGTGCTATAAT
>NGR_b14390(mntR) Score=5.8 Pos=-61 [Rhizobium sp. NGR234]
AAAATAGCCTTAGCTATATT
>NGR_b14380(COG2132) Score=5.8 Pos=-153 [Rhizobium sp. NGR234]
AATATAGCTAAGGCTATTTT
>NGR_b14380(COG2132) Score=6.2 Pos=-73 [Rhizobium sp. NGR234]
ATTATAGCACTTGCTATATT
# TF - RhiR: NGR_b17740
>NGR_b17670(rhiL) Score=6 Pos=-175 [Rhizobium sp. NGR234]
GTATGAAAATGTTTTCATCA
>NGR_b17670(rhiL) Score=5.9 Pos=-32 [Rhizobium sp. NGR234]
TTATGAAAAAGTTTTCATGA
>NGR_b17680(rhiX) Score=5.9 Pos=-182 [Rhizobium sp. NGR234]
TCATGAAAACTTTTTCATAA
>NGR_b17680(rhiX) Score=6 Pos=-39 [Rhizobium sp. NGR234]
TGATGAAAACATTTTCATAC
# TF - PsiR: NGR_b11520
>NGR_b11530(psiA) Score=6.6 Pos=-173 [Rhizobium sp. NGR234]
TTGCACCATCGATTGTGCAA
>NGR_b11530(psiA) Score=5.2 Pos=-151 [Rhizobium sp. NGR234]
AAGAAATATCGATTGTGCAG
>NGR_b11520(psiR) Score=5.2 Pos=-109 [Rhizobium sp. NGR234]
CTGCACAATCGATATTTCTT
>NGR_b11520(psiR) Score=6.6 Pos=-87 [Rhizobium sp. NGR234]
TTGCACAATCGATGGTGCAA
# TF - SMb20537: NGR_c15120
>NGR_c15120(SMb20537) Score=5.7 Pos=-38 [Rhizobium sp. NGR234]
CACTTGCAAATTTGCATTGT
>NGR_c15130(SMb20538) Score=5.7 Pos=-49 [Rhizobium sp. NGR234]
ACAATGCAAATTTGCAAGTG
# TF - SMb20667: NGR_b20310
>NGR_b20310(SMb20667) Score=6.4 Pos=-161 [Rhizobium sp. NGR234]
AGATGGCAGCGCTGCCATTA
>NGR_b20310(SMb20667) Score=6.4 Pos=-129 [Rhizobium sp. NGR234]
GTTTGGCAGCGCTGCCAAGT
>NGR_b20310(SMb20667) Score=6.5 Pos=-106 [Rhizobium sp. NGR234]
AATTGGTAGCGCTGCCAAAA
>NGR_b20320(COG2271) Score=6.5 Pos=-136 [Rhizobium sp. NGR234]
TTTTGGCAGCGCTACCAATT
>NGR_b20320(COG2271) Score=6.4 Pos=-113 [Rhizobium sp. NGR234]
ACTTGGCAGCGCTGCCAAAC
>NGR_b20320(COG2271) Score=6.4 Pos=-81 [Rhizobium sp. NGR234]
TAATGGCAGCGCTGCCATCT
# TF - MocR: NGR_b17120
>NGR_b17110(mocD) Score=5.6 Pos=-104 [Rhizobium sp. NGR234]
TTTGAGAGAATATATCATG
>NGR_b17120(mocR) Score=5.6 Pos=-74 [Rhizobium sp. NGR234]
CATGATATATTCTCTCAAA
# TF - SoxR: NGR_c16780
>NGR_c15730(PF07690) Score=5.7 Pos=-63 [Rhizobium sp. NGR234]
ACCTCAAGAGCGCTTGAGGT
>NGR_c16770(PF03358) Score=6.5 Pos=-68 [Rhizobium sp. NGR234]
ACCTCAACTAAGCTTGAGGT
>NGR_c16780(soxR) Score=6.5 Pos=-31 [Rhizobium sp. NGR234]
ACCTCAAGCTTAGTTGAGGT
# TF - CueR: NGR_b08420, NGR_b07380
>NGR_b08300(PF11162) Score=4.8 Pos=-135 [Rhizobium sp. NGR234]
ACCTTACCATCGTTGGAAACA
>NGR_b08430(copA) Score=5.6 Pos=-57 [Rhizobium sp. NGR234]
ACCTTACCATTGTTGGAAGGA
>NGR_b12440(copA) Score=5.3 Pos=-58 [Rhizobium sp. NGR234]
ACCTTCCCACCGTTGGAAGCC
>NGR_b07400(copA) Score=4.5 Pos=-58 [Rhizobium sp. NGR234]
ACCTTCCGACCGTTGTAAGCC
>NGR_b08480(copZ) Score=4.9 Pos=-57 [Rhizobium sp. NGR234]
ACCCTGCCATCGTTGGAAGCC
# TF - MerR: NGR_c22280
>NGR_c22270(grxC) Score=6.4 Pos=-65 [Rhizobium sp. NGR234]
ACTCCGTACCATGGTACGGAAC
# TF - CadR-PbrR: NGR_c07360
>NGR_c34490(cadA) Score=6 Pos=-54 [Rhizobium sp. NGR234]
TAGCTCTAGTCGCTAGAGGTT
# TF - SMb21598: NGR_b15600
>NGR_b15590(COG0673) Score=6.4 Pos=-98 [Rhizobium sp. NGR234]
TTCCGTAAACGTTTACGGAC
>NGR_b15600(SMb21598) Score=6.8 Pos=-63 [Rhizobium sp. NGR234]
GTCCGTAAACGTTTACGGAA
# TF - SMb21706: NGR_b18600
>NGR_b18600(SMb21706) Score=6.7 Pos=-45 [Rhizobium sp. NGR234]
ATGAGAAAACGTTTTCTCAT
# TF - SMc04260: NGR_c17850
>NGR_c17830(SMc04259) Score=5.8 Pos=-32 [Rhizobium sp. NGR234]
TTACGGTAACGTTACAGTGA
>NGR_c17850(SMc04260) Score=5.6 Pos=-175 [Rhizobium sp. NGR234]
CTACTGTATCGTTACAGATA
# TF - RL4253 : NGR_c33050
>NGR_c33060(RL4252) Score=6.2 Pos=-129 [Rhizobium sp. NGR234]
GATTTGTAACGTTTTAAATT
>NGR_c33050(RL4253) Score=5 Pos=-88 [Rhizobium sp. NGR234]
GATTTAAAACGTTTGCATCA
>NGR_c33050(RL4253) Score=6.2 Pos=-225 [Rhizobium sp. NGR234]
AATTTAAAACGTTACAAATC
# TF - SMb20717: NGR_b14980
>NGR_b14980(SMb20717) Score=5.6 Pos=-131 [Rhizobium sp. NGR234]
TGATGTAAACCTTTACACTA
>NGR_b14980(SMb20717) Score=5.7 Pos=-109 [Rhizobium sp. NGR234]
CACTGTAAAGGTTTACATCA
>NGR_b14990(SMb20718) Score=5.6 Pos=-53 [Rhizobium sp. NGR234]
TAGTGTAAAGGTTTACATCA
>NGR_b14990(SMb20718) Score=5.7 Pos=-75 [Rhizobium sp. NGR234]
TGATGTAAACCTTTACAGTG
# TF - EutR: NGR_b23330
>NGR_b23320(ehuA) Score=3.9 Pos=-119 [Rhizobium sp. NGR234]
ATTGACATGATTTTGG
>NGR_a01490(eutB) Score=3.1 Pos=-10 [Rhizobium sp. NGR234]
ACTGTATTAGGTGAAT
>NGR_a01490(eutB) Score=3.3 Pos=12 [Rhizobium sp. NGR234]
TCGAACTTAAGTCTAG
>NGR_b23340(doeX) Score=3.6 Pos=4 [Rhizobium sp. NGR234]
TCAAAATCAGCTCAAT
>NGR_b23320(ehuA) Score=3.1 Pos=-142 [Rhizobium sp. NGR234]
ATTGTCATGATATTAT
>NGR_b23330(EutR) Score=3.6 Pos=-30 [Rhizobium sp. NGR234]
ATTGAGCTGATTTTGA
# TF - BioR: NGR_c05470
>NGR_c25140(bioB) Score=4.4 Pos=-60 [Rhizobium sp. NGR234]
CTATAGATAA
# TF - SMb20014: NGR_b02600
>NGR_b02560(SMc20018) Score=6.1 Pos=-59 [Rhizobium sp. NGR234]
CATTGAAATCGATTACATTT
# TF - AfrR: NGR_c33000
>NGR_c32990(PF06187) Score=6.3 Pos=-246 [Rhizobium sp. NGR234]
TAATTGGAACGTTCCAATTT
>NGR_c32990(PF06187) Score=6 Pos=-49 [Rhizobium sp. NGR234]
AATTTGGAACGATCTAAATT
>NGR_c33000(afrR) Score=6 Pos=-254 [Rhizobium sp. NGR234]
AATTTAGATCGTTCCAAATT
>NGR_c33000(afrR) Score=6.3 Pos=-57 [Rhizobium sp. NGR234]
AAATTGGAACGTTCCAATTA
# TF - NGR_b22600: NGR_b22600
>NGR_b22600(NGR_b22600) Score=5.9 Pos=-114 [Rhizobium sp. NGR234]
GAATGTAAGCGCATACATAG
>NGR_b22600(NGR_b22600) Score=4.3 Pos=-48 [Rhizobium sp. NGR234]
GGATGTATGCGTATACATAT
>NGR_b22590(dctQ) Score=4.3 Pos=-154 [Rhizobium sp. NGR234]
ATATGTATACGCATACATCC
>NGR_b22590(dctQ) Score=5.9 Pos=-88 [Rhizobium sp. NGR234]
CTATGTATGCGCTTACATTC
# TF - IdnR: NGR_b22310, NGR_b22380
>NGR_b22270(idnO) Score=6.7 Pos=-48 [Rhizobium sp. NGR234]
GAATGTTATCGATAACATAA
>NGR_b22260(COG1063) Score=6.7 Pos=-21 [Rhizobium sp. NGR234]
TTATGTTATCGATAACATTC
>NGR_b22380(idnR) Score=6.5 Pos=-67 [Rhizobium sp. NGR234]
AGATGTTATCGATAACAAAT
>NGR_b22380(idnR) Score=4.8 Pos=-88 [Rhizobium sp. NGR234]
GAAGGTTATCGTTAACTTAG
>NGR_b22410 Score=6.5 Pos=-54 [Rhizobium sp. NGR234]
TCATGTTATCGATAACATAA
>NGR_b22370(Atu4687) Score=6.5 Pos=-217 [Rhizobium sp. NGR234]
ATTTGTTATCGATAACATCT
# TF - XylR: NGR_c29500
>NGR_c29500(xylR) Score=6.6 Pos=-53 [Rhizobium sp. NGR234]
TTTGATTTACGTACATCAAA
# TF - Mll1683
>NGR_b21720(mll1682) Score=6 Pos=-262 [Rhizobium sp. NGR234]
TATTGGTAGCGCTACCATTT
# TF - SMb20039: NGR_b00120
>NGR_b00110(COG697) Score=13 Pos=-119 [Rhizobium sp. NGR234]
ATCCGTACCGG-(8)-CCATGACAGTT-(6)-AACTGTACTTC
# TF - Mll0059: NGR_c16240
>NGR_c28110(phzF) Score=7.7 Pos=-84 [Rhizobium sp. NGR234]
AATTGTCA---AGACAAGT
>NGR_c16240(Mll0059) Score=9 Pos=-10 [Rhizobium sp. NGR234]
AATTGTCA---TGACAACT
# TF - UxuR2: NGR_b19310
>NGR_b19310(uxuR2) Score=5.4 Pos=-63 [Rhizobium sp. NGR234]
GAATTGGTATGACCACTTG
# TF - MdcY: NGR_b02870
>NGR_b02860(matA) Score=5 Pos=-136 [Rhizobium sp. NGR234]
TTGTATACAC
>NGR_b02870(mdcY) Score=5 Pos=-43 [Rhizobium sp. NGR234]
GTGTATACAA
# TF - FnrN/FixK/AadR: NGR_b00800, NGR_c18100
>NGR_c09980(paz) Score=4.7 Pos=-92 [Rhizobium sp. NGR234]
TGTTTGACAGACATCAAAGA
>NGR_c09950(nirK) Score=3.6 Pos=-196 [Rhizobium sp. NGR234]
TCTTTGACAATTGGCAAAGA
>NGR_c09950(nirK) Score=4.5 Pos=-92 [Rhizobium sp. NGR234]
TATTTGTTCCACCTCAAAGA
>NGR_c09830(Atu8040) Score=4.7 Pos=-64 [Rhizobium sp. NGR234]
TCTTTGCGCTTGATCAAAGA
>NGR_c17990(ccoN) Score=5.5 Pos=-115 [Rhizobium sp. NGR234]
ACCTTGATCTGAATCAAGGC
>NGR_c17930(ccoG) Score=5.3 Pos=-79 [Rhizobium sp. NGR234]
GACTTGACGCAGATCAAGGT
>NGR_a02570(ompW) Score=5.1 Pos=-100 [Rhizobium sp. NGR234]
CGGTTGATCTCGATCAATAT
>NGR_c03790(adhA) Score=5 Pos=-21 [Rhizobium sp. NGR234]
ATCTTGATGGAGGTCAAGGG
>NGR_c09990(napE) Score=4.7 Pos=-130 [Rhizobium sp. NGR234]
TAATTGACGAAAATCAATTT
>NGR_c30700(hemA) Score=5.2 Pos=-156 [Rhizobium sp. NGR234]
TGCTTGACTTCGATCAAAGT
>NGR_c18100(fnrN) Score=5.5 Pos=-162 [Rhizobium sp. NGR234]
TTTTTGATCTGGATCAAGTG
>NGR_c18100(fnrN) Score=3.7 Pos=-123 [Rhizobium sp. NGR234]
AAATTGACATTCGTCAGTTC
>NGR_c05230(ctaC) Score=5.5 Pos=-38 [Rhizobium sp. NGR234]
GGTTTGATCCTGATCAAGCG
# TF - YrdX2: NGR_c19920
>NGR_c19900(COG5349) Score=9.2 Pos=-132 [Rhizobium sp. NGR234]
ATGCATACAAT------AGTGTATGTTA
# TF - FixJ
>NGR_a01250(fixX) Score=3.4 Pos=-18 [Rhizobium sp. NGR234]
CTAAAGGGGAGCATTGAG
>NGR_b00800(fixK) Score=4.5 Pos=-89 [Rhizobium sp. NGR234]
CTACGGGGAATCCCGCAA
# TF - Bll2166: NGR_a02420
>NGR_a02430(blr2167) Score=5.7 Pos=-141 [Rhizobium sp. NGR234]
AGTGAATCAGATTCACC
>NGR_a02420(bll2166) Score=5.7 Pos=-23 [Rhizobium sp. NGR234]
GGTGAATCTGATTCACT